Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTATTACCACCCCTAATTAGTATAGTATACAAGTAGTGCTTGTAAGTAGCTACTCCCTCCATTTTTTTTTTAAATTTTATGTTTGCTTTTTTTTTTTAACACTTTATTAACGACTAATTAATGTACAATGAGATTCCTCTATTTTTACTTCCTTAAAAAAAAAGATTCCTCTATTTTTACAATTTAAATAAGGCAAATTACTTTAATGTCCTAATGGAAAAATGTGAAAGATTAAATGACCCAATGAATTTAATTGGTTAAAATAATCATTGGACATAAAATTTGATAGAATATTAAAGCATTTATGTATGAAATTGTACATCTTTTAGTTGATATGTAATCAAACATAACTAAAATCTCTAGTGTTAACCACAATAAAAATGTCATATTTGTATATCTCTATTCTATAAGTATGCAACAAGAGTACAAGACCATAACGGGACTCCGCAAGTATGAGATCTACAAGTATAACGACTAGCCGACAATAACTTACCACCAATTTATCAATACTTCGTTAGTTCATACAAGCTATTAAACAATTATAGCCTTATTAGAATAAGAAAGGGAAAACAAGTTATCAAGTAAAAAAAAACAAGTACGTGAATTTTAGTAATTAAAAAAGTTGAAGGTAAAACTAAGCGGCGTTAGATGTTGGTCAAGTTAAAGCAAAATTGATTCAATACTAGGTCGGTTAGATAATAGTTCGGGTCAAATCATATATTTTTTGGGTCAAATCGTCGACGAGTGGTGTTCAAATCGGGTTAAGCCGGTGTCGGTTAGATAACAGTTCGGGTCAAATCATATATTTTCATGGTCAAATCGGTGTCCGATGAAGTTCAGGTCGGGCCAAACCGGTGTCGGGTGGAATTTAGGTCCAATCTAACATGTGGTGGGTGGAGTTCGGGTCGGACCAAACCGGTGAAGAGTGGAGTTCAGATCGGGTGAAACGAGTGTCGGGTAGAGTTCAAGTCGGTTACAGATCGAGTTCGGGTCCTAAATTTCCGGATCAAACCAGTTCGATTACACTTTGAAACAGGTAGTTTTTTGCATCCATTCAATGTATAAACGTTGACCATAAAACATAATTGGTACTTCACCTCACTCTTTTATCATGTAGATCAAAACACACAATTTTTTCTTGGCGAGGGCAAAGCCAATGCAACTTGTTGTTATTGAACACATCACCGCCATGACGATCACTAACAAATAACCCAATTGGCATTGATCCGATTCTCTCCAAGAATCCGACTTTAAGCTATAAAACCATGCATGTTTTATAATGCATTAATACTATTAGAATCTTAAAATCATCACTAAGATGATCAAACCCAAACCCAAACCCAAATCCAAACCCGATTACTCTAGTGGAACACCAATTAAAGTTTATACTTTCGGGAACCTCTATAAGTTTAAGCACGTGTGTGGCGGGATTGCACAATATTAAACCTTGTTTTGACGTAAGATATAACAAGCCCTTACACGATCCAACAACTTGATAATTAAACTGACACGGTAACTCAATTTTGATGAAGGGGAGAAACTATTAAGGTCATGAATATGATAAAGGGTTGACTCTCGAATAGTTACTAGGGAGACATTGTTGTTCCTTTCAAGAGAACGTTACAATGATATTCAATAAAACCCAGAGTTTGAATTAAATTGTACCATTCTTTACAAACTAACTTAAACTTAAGAAGAGCTTTAACGGGTAGTAAGGAAAGTATTTCATGAACAAGATCGGGAGGAAGACTAGCCATGGTTGATGAATGCAATATTTTTAATATGTATTTTGCTTCTTAATTCTCTAAAAATATTTCAACAAATATCATTATATTATTTCAACCGAGACTATTCTAATTATACAGAAATACAAAATTAGCATGAAAATTAGGAAACCAAGTTTTTGTACAAAAAGAAAACCGTATCTCCCAATTTAAAACATAAAACAAAGTAAATTTTCATAAGTTTTTTTTGTCCCATTTTTTTATTTCTTAGGCAAAGTTCACTAGTTTTTTATTATATTAATTTATTTTTTAAATGATAAATAATGAGATATAATTAAATATAATAGGAGTCAAATACTGGTCAAAGATAATAAGAGATAAATTTTTCTAGGAGTCCAAATAATAAATAAATACTTAGTAAAAGATAATAATACATAAATTTTATTACGAGTCAACTATCATGTTCTATATGATACTACTGCTACATTACACACAAAAAAAATCTCATTAACGAAGGGCTATTTATGACGGGCTCAAATCTCGTATTTTAAGTGAAAAGTTCTACGACATGGTATCTAATTACTGACATGATCGATATATGTGATGAGGTAGTCAATTATGACGACCTAACCCTCTTTCACTACGGACTTGTGACGGAATCACGTTGTAATTGTTCTTTTACGACGGGAAATCATGTCATTAATACTTTTACCCCGTAAAAAAAAAAGTAACGAATCATGCATTACCTCTATAATTTTAATGTATTGATCTGTGCATCGCACGGTCTTAATTCTAGTACAAAATATATTAGTACCAATAACACAAAATGACTAGCTTGTATTGATATTTCTTAGCCATTTTGCGTTTTTGGTACTGACATATTATGTATCGGTACTCAAGTTGGTTGTATAGGTTTAGAAATCCTCTTCAATTACGCGACAAATTGGGTATCAAAGCATACCGAATAACTTTAACTGTATATGGCTAGGGTTGAGCAAAAGTATTCGAAAAATCAAAAACCCGATCTGATACATGAATTGAAAAAATAGGTAATGAACTGATATTATTACCAGCTCGGATAGCAAATCCAAGAACTCGAATATCAGATGATTTTTTTCATAGGGATATTATTTTACAATTAAAAGACATTCGATAAGAAATTTTCTTATAGCCTTTTCTAACTTAAATTTTGGTTTGATATAATGTGTTATTATTGGTATTACTTCGTAGTATTGAATGATATTTATAAGTAATAGTTTTGTTCGATTATAATATGTCAAAATGTTACCCGCTACCTCAAACGCTACCGCCAAACACGCCTTTGGAATAGATTAAACAGATACATTACATTGTTGATTGTACAATGTACATACAGTAAAATTTTTAATTTTAATTTTTTAGGGCTCATTTGAGCGGTTAAGCTCACCACTGCAAGAACCTCCCCCGAAACTAGAACTCCGGCGAAAGCTCAAAAATGGCGGACGGCGGAGCCATGGAAATATCTCTCGACAAGCTCCCTATCAAACGCCTCGATGCTATCGAAGAATCCGGCGTCGAACGCTTCCCACCGTACTCTCTCTTATTCTCTCTCCTCCCTCAATTAGAGCCTAATCCTCCCCAATTCTTTTCAATTTTATTTATTGGTAATTTTGATTTTGAATTTTTTTCAGTGAAATCGAATACGAAGAGAAAGCGGTGAATCTAATTCGGAGAGTGGATTTCGCTTGGGCGTTGGAAAGAGATGCGAAGAAGCAGAAGAAGGCGAAGGAAGCATCGGCGCCATCCACGTGGCAAGGATTGGTTGAGAATTTGACATTGGCTCATCAGGAGCTCTCTGTAATCATTGATCTCATAAACACTGTAAGCTCTTTCTTACGAATCGCACTGAACTTTTTTTTGTGTGTGTGAAGATATTCTTATTTGAAGCTGAAGTTGTGGCAATTGGCGATGTTGTTGAGTAGATTTAACTGTGAACTTTGAATTTTGCGCTGGAAATTTTTGGGTTTTTGCAAAATGTGAAATGAAGGTTGTACTTGTATGTGATGTATGAACACATAATTTTGTAATCGTTAGTGTTTTGGATCCGAACTTTGCTCATTGAGGATTTGAACTTGAAATTGGTTTGTTGAATGCGGGTGTTAGTTTTGTCACGGATTTCGAATTTTTGCACCGGAAAGTGCTGTGGTTTTCTGGATGCGACATTGAGGTTGTATATGAAGTATGTTTGATCAGTTTCGCAGCTGTTGTTATTTGGACGTGAATTTGGCGAATCCAGTATTTGAATTGAGCTTGATTTAAATTTAGAATTCCTAGATTTCAGTGGTTCTTTTGTTGTAAAATTGAGGTTGTATGTGAAGTATGATGCTTCTATATTATTCTTCAACTTTTAATTGCAAGTTTTCAGGAATCAGAATGTAAGTTTTGTAGACTCAGTAGTCAGTAGACTGAGTATGCAATTTAAGCTTGAGAGTCGGCGTTCGTTTTTCTGGTGCTTAGGACTTAGAGTAGTTTTACCCGCTCTCCCTTAGCCTTTTCTTTATTGCTTTTCATCAGCATTTAAGTTCTTGGACATGAACTTGCCCCCTCTCTTTTACTGTGTACTTTGGAGACAATTGAAATATTGAATGCTCATTTGATTGCGTTTAATTCCGTTTAAGGAAAATGTGGCATTTAAGTACTTGTGACCGAAATGAGCAGTTCGTTAGGACCTTATTTTGCTTGCTTCTCGGATGGGTTGGTTGTCCTGAGCTCCTGACTCCTGCATTAATATGTAATATGAAGTATGCTAATTTGGAATATTTAAGCTAGTTTTTCCACCATTTCCACAAACCTTAATTGGGGGTATGCTTTATCTTGTAATTTTCCTTATTGAAAGTGCTGATCTGCAAAATTTGGCTGATTATTCAGGTTGAAGCTAATGATGCAGTCACAGTGGCTCATATGAATAGGCCAAAACCATTGCCTAATGAAGCCATGTCCGACCTTGCAGTGTCTGCTGCAACTAAGCTACAATGTTATCGGGTATTGCCATTAGTCTTTTTGTGTCTTTAACCTTACTGTTATTACCAATGACTCATTGTGTGTATGCTACTGTAACTGAATACTTTTCCACTTCCTAAAGTAAAATAAATGTATCATAAAAGTTCTACCTTGACGTCTAAAGTAGCAGTTAACAACTTAACATGAAAATTTTCTTTTAGATCTGGATGGAATAAATTTTTAACCTTACATGCTTCTTATTCTCCTCTGCCTCACATGCAGCATCTCAGTAAGTACTTTAAGCAGTCTGCGAAATCCTTGGAACATCAGATTGCTAGAGAAGCAAGATTCTACGGAGCTCTCATTCGGTGAGTGTGCAGAAGTGGACACTCTCCCTTCCCTTAGATATATTGATAAAGTATTAATTGAATAATTAATGCCTTTTGCATGCCAATTTGTCGCATTGCAATTCTCTTTCAGCATTGATGTGGATCTCGATTATCAATTTGGCAAAGTTTTCAAAAATCCACATTTGATGAAATGAAGATTAGATCTTCATCTGTAATTTTTAATGTGAACGAACCAATATATGCACAAAGAACACCTCTGGACTTAGAGCTTTGAATCTGCGAAACCATCTAGATCACTCCTGATCTATGTCTTTCAAACACTACTCCTTAAAGGACTCCTGATTTCTGGACTAATGAAAGCTAGTTAAGCAACTCATGAAACAATCAATCATCAAATTTCTGTAAAAACTCTCTAGCTAATTCGTTTGCTATTATAAGCAATAGGCGTGTGAAATAATCCAACTTGGGGTAGGATTAGGAGCATACAACCAGATTAAAACTTCTACAAAATTAAGGAAGCAAGTTTTATTGATCTTTAAGCAAAAACACGCCTAGCAAGACCTACTTAACTAACGAAAGATAATTAACTCGTAAATGACCTTGGAACCAGAATTACTAAACTAAACACACCCAACCTAGACTAAGCTTAAGGACCAGCTCAATTTACAACTTGCACCCTGTATAATCAAGCCTTGTGAGGTAGGGGAAATCACAGGCTTATTAAACAAACCAAACTAGAGAGAAATTAAAGACAGGCTAAGCGAGAGGCGGCACAAATGAGGAACTCTTGCTTGTTGGCGAACAATGGAAGCCCATAGTATGAAGGACCAAGGTGACAGACTCATCTAAAGAAATTGACATTAAATCCTCACCGAGCATTACTGTCCCAGTTTCAGTAGCATGGACTCTTGTGGAATCTAGTTGCATTTCATCCATGTCCTCATTGCTGTTTCTCCTCATAAGTTATTATGCTTTGATTGTGTGATGTTTCCACTTTCCATTATCATTACCTTGCTTTTTTTGTTTGTTTTTTTCCAGTATTCCCAGTGATTTGGGACACGTTCGTTTCATTTACATGATTTACTTATGCTAACTACACTTTGCATGAATTGTGTATGAATATACACATTGGCCCTGTTTGCTTGTTTGAGGAGTGGAGTAATTTAGAGGTTTGACCAACTCAATCCTCTCATGTAGGTGTTTGGTTGTTAGCGGATTGGAATAGCGGATTGAGATGGATCTGCTAATTTAAAAAACGCTGCTCCTAGTAGCTTTTCTAATTAGAGGATAGCATTGGGTCATATGAAATTACAACTTTGTCCACAAGTTAATAGCAACAAAGCATCCATTTTACTTCCACCTACCTCTCACAAGTTCACTCTCACCTCCATAGTAGATCCAAGAAGGTTCCTTGTAATTTTTTTCCTTTCCCATTTTATTTTTCTTGTTTATTTTATTTATTTCTCCTCTTTTGATTCTTCTTAAGGTTTTTTTCTTGATTTTTTTGTAAAAATATTCTCTTCTGCGTTTATTTTCCTTTTTTTTTTCGAGGATCTGATTTTTTTTCTTGATTAACTTGAATCCATTATTTCGTGCTCCTCTTTTTACTCTTCAGTTTTTTTCTGGATTTATTTTCTGTCACTATTTTTTACTCTTCTGCGTTTTTATTATAAAGATTCTGCAATTTTTTTTCTGCTCCTTTTTTACTCCTCTTCTAAAATGTACTAGTCAATCTACTAATTCAATCCGCTACAGCTAACCGCTACCCGCTAATTACCAAACAAAGCCATTATATTAAGGTTTGTGTCAATTTAAGTTTTTCTGAACAATATTTATTATAAATCATTAAATCTAGGCACATATTGTAAAAAAAATATACATTTTGTATGTCTAATTTTGTGTGAAACAACCTTATACAATTTTGCTAGCAAATTCAGACACAAAAGAATTTTTTATTTTTTTTTTTGCAAAAAACAACCTTAGTTAATTTTCAAGTGTTAACTCAGCCTTTTCCGACGTTAACTGTGGCGTACCGTATGTCTTTTTTCTTATAATTTGCCAAAACAGACCTTTTACATGATTGACTTGCGAGAAACAACCTTTTATAATTTTTTTTGGCAATTTTAGACCTTATAAAAAAACTTTCCGAGAAACAACCTTTATAACCTTTTAGTGTGAAGAAAATTTCATTTTATCGGCTAGCTAGTAGCATTGCAAAACTTACACAGACACAATAAGTGAACTTAATGTTGAGACCTTCAACTATTTATCCAGCATGCTAGAGATCAAGGAATGCACGAGTCTGGTGTGTTTAACTACTGCTTTGAGAGTTTCAATAATTTGTCAAAGGAAAACCAATCCTCTAGTATTCCTTGTCGGCATGCATTGACATGCATCCAAAAGAGAAGTAGAACATAACAATACATGAGAACTTCATTCACCATGCATAACCATGTACAAATATATGCCAAATCTTATGCACCTGCCTTAATATTAGGCCATAACTAGTGGGAAGTTGCACTTACCCGGAACCATTTCTTCATACTTATTCGAAACATTGTTGATAGGCCTAGGAAAAAGGGGGAAAAAAGGAACAAGAGGAAGGTCCGGATAAAGCAAAATAGGCTAAGAGAGCCAATCATAACAAAACAATAAATTTAGTTCCTTTTGACTTCCATGTGAATCTTGAAATGATATTAACACAATAAAAGTAAACTCCTCTTCACAATAAAATGTTACGATGGTTACCTCTCGAAAATATTTTTTTTAAGGTCTAAAATTGCAATTTTTTTTATAAAAGGTTGTTTCTCTGTAAACATATATAAGGTCTATTTTGGCAAGTTTTGCAAGAGAAAAGATGCATATGACCCACATATCATAGTCAAGGCCGGAAAAGGGCCCGGTCAATGCCTGAAAATATGCTAAGGTTGGTTCTGGTTTATTTTTTTTATTTTTTTTATAAGGATATGCTCATATGGTGCTAGTGGATAACCCTTCTTTCTTCAGGTGTATCTGGAAAGGCTTACTTATTGACTGCCACTTCTCTGTTTGTCAACATTAGATTATTCATCTCTGTTCTGACAAGCTGACAGTTTGCAGCAGAATTGGAAAGTCAAATGGCATCGTTTGGCTGCAACTGCTCCTGGTAGTGACGGTTTTCTGATCGATCTTTCCAACAACGCAGCACATGAGCAGCCAGCTGTTCCCCGAGCTCCGACGTTTTCTATGGTCCGTGTGGACCATGATTCATCTGGCATGTTGGCTGTGAATTTGCCTAAAAATTCATGTCGCTCTTTCCACTTTGGTTTTCTGGATGCTCAATCGGGTGATAGTGATAGTCCAGAAGGATGTGGGAGAATGAATTTAGATACAGGTGATAGTCCAAAAGAATCAAGTGACGATGATCGTATACGAGAAACGCACACCGTCCTTTGTAACACCCACAGGGCCATATTTTATGAACAGGTAGGTGTGAACTATTTACTACACTCCTTATTGAAGCTTTTTAACTTTTGACCATATCCTTCCTTTTTTGACTTACCATGTTTCTGCTGATAGGTGTTTGAATTAGTCAGTCGTGAATCCTTTAATCCATCTTTGGGGGTAAACGTGACTGGAATACGAGAAAACTATTTGGAACTGAGCATAAAACCAGGTGTATCTGTTTTCATATTGCTAAGGCCATACAATCAGGAAGATCAAGGTAAAAACAACAGTGACACTCAGAACGTGGATGATTTAGCTAAAGGATCAAGCTTGGTGGAAAGCAAGCAACATATTAAGTTAATATCTGGACACCCCAACCCCATCACTTATGAAATATATCTGCAGCAGCTTTTCCGTAATGAAATATTTTCAAAGGTGAAGCACCAACCAACCTTACCTGGTAAAGTTCAGTCTAATCAGCAGACAAATGATGCTGCGGGTCTTGTAAATCATTTCTGCCTTTCTCTGGCTCATCGAACCTTCTCAAGCAAAGTTCTAGTGGAGCTGGAAAACCTGGTATTTGCAAATTTCAATTCTATGTAGTTTTTGTAAACTTAAATAAGACTTTTGTTTCTTACTCATTATTCTCTCTTATCGCTGTAATTTATTTGCGTCAATTAGGTTACCAAAATCCCATATCTCCGGCTTATATCTCAACCTACTTGGCATTCACGGTCTTCCTCGTGGGCATTGTCCGTGAACGTTCCCAAAGCCAGAAGTGCAGAGTCTCAGGCATGGAGATCAAATGAAGATCACACTAAAGAAAACAAGTTACTGTTTCAGACAAGGGTGGTGGTGAAAGATGATTGCATCAGCATTGAAGGCGGAGGTGCCCCTAATGTTTTGTTCAAAGGTAAGCCTGAGGCAATGGGCTCCAAGAATAAATTCAATTGTGACATAGTAGATCTCCCTATGGTCCTTCTGTTACAGGTAATATTATACATCTTGAAACTCTTTTGCGTTGTGTTTATATTGTGAATATTTATCTTTGTAGTGTTTTAAATTTGAGATGTGAACTTGTGGTTGAGGATGTTGTGGGTTTGATCGGCAGGTAGCTAGCCAGATCATATACTGGCTACACGAGGAGGCATTGACGGTGGGGATAAAAACAAACCAGGATTTTCTCTGCCTTTCCTTGGAGCTTGAACAAGGGGAGACACTAAGCCTGGTTGCGCATGTTGATCCGGAGGATGAACTGGGATGCATCTCTTGGTGGCTTACGGTGGATGATGGGTCTACCGAGGAGCACAAACTTCAGGCAGATATCCCTGATGGTGAGTCTCCTTCAAGGCGGTTTTTGGGTCATTTGTCTTTGAATGCGTTATACTCCACATTGATGGATCTTGTTAGTTTGTGCAATGTCAGTGTTAGCCATTGAATCTGGCCTTGTTTTGCTTCACACATCAATGGAAATGTATACTAGTATTTGTGTTTTAGGTGTTTAGCAGCCTATGAGAAATGTGCATGAATTGAACTGACTAAATTTCACTATACGTATGCTATGGTGTTTAGCAGCCTATTTTTCTTGCAATTTGTTACAGGATATTACTTATTTGTAGAATCATGCTTTCAATGTACAGTTCTGTTGCACAATCACCAGTCCCCTAAGGAAATCTGCTGTTAGATAAAATTATAATTTATTGGTGGAAGTATATTGAATTTTCTCGTTGATCATAAGCATAGGCCTGTGTATCAATTTTTCTGTTAAGTTTCCTTAGGGCGCATTTTGATAAACATATGCTCTCTTTGCCAAGAAAATCTGATTTCCAATTTCTCTGTTAAGTTTCCTTAAGGCGCATTTTGATAAACAAATCCTCTCTTTGCCAAGAAAATCTGATTTGAAATGATAAAGAATTGATTATGATCTCCCTGTTTACTCTTGTCATTTGTTGAGGCTCAAGTCTTAATGACACCGT
mRNA sequence
TTATTACCACCCCTAATTAGTATAGTATACAAGTAGTGCTTGGCTCATTTGAGCGGTTAAGCTCACCACTGCAAGAACCTCCCCCGAAACTAGAACTCCGGCGAAAGCTCAAAAATGGCGGACGGCGGAGCCATGGAAATATCTCTCGACAAGCTCCCTATCAAACGCCTCGATGCTATCGAAGAATCCGGCGTCGAACGCTTCCCACCTGAAATCGAATACGAAGAGAAAGCGGTGAATCTAATTCGGAGAGTGGATTTCGCTTGGGCGTTGGAAAGAGATGCGAAGAAGCAGAAGAAGGCGAAGGAAGCATCGGCGCCATCCACGTGGCAAGGATTGGTTGAGAATTTGACATTGGCTCATCAGGAGCTCTCTGTAATCATTGATCTCATAAACACTGTTGAAGCTAATGATGCAGTCACAGTGGCTCATATGAATAGGCCAAAACCATTGCCTAATGAAGCCATGTCCGACCTTGCAGTGTCTGCTGCAACTAAGCTACAATGTTATCGGCATCTCAGTAAGTACTTTAAGCAGTCTGCGAAATCCTTGGAACATCAGATTGCTAGAGAAGCAAGATTCTACGGAGCTCTCATTCGTTTGCAGCAGAATTGGAAAGTCAAATGGCATCGTTTGGCTGCAACTGCTCCTGGTAGTGACGGTTTTCTGATCGATCTTTCCAACAACGCAGCACATGAGCAGCCAGCTGTTCCCCGAGCTCCGACGTTTTCTATGGTCCGTGTGGACCATGATTCATCTGGCATGTTGGCTGTGAATTTGCCTAAAAATTCATGTCGCTCTTTCCACTTTGGTTTTCTGGATGCTCAATCGGGTGATAGTGATAGTCCAGAAGGATGTGGGAGAATGAATTTAGATACAGGTGATAGTCCAAAAGAATCAAGTGACGATGATCGTATACGAGAAACGCACACCGTCCTTTGTAACACCCACAGGGCCATATTTTATGAACAGGTGTTTGAATTAGTCAGTCGTGAATCCTTTAATCCATCTTTGGGGGTAAACGTGACTGGAATACGAGAAAACTATTTGGAACTGAGCATAAAACCAGGTGTATCTGTTTTCATATTGCTAAGGCCATACAATCAGGAAGATCAAGGTAAAAACAACAGTGACACTCAGAACGTGGATGATTTAGCTAAAGGATCAAGCTTGGTGGAAAGCAAGCAACATATTAAGTTAATATCTGGACACCCCAACCCCATCACTTATGAAATATATCTGCAGCAGCTTTTCCGTAATGAAATATTTTCAAAGGTGAAGCACCAACCAACCTTACCTGGTAAAGTTCAGTCTAATCAGCAGACAAATGATGCTGCGGGTCTTGTAAATCATTTCTGCCTTTCTCTGGCTCATCGAACCTTCTCAAGCAAAGTTCTAGTGGAGCTGGAAAACCTGGTTACCAAAATCCCATATCTCCGGCTTATATCTCAACCTACTTGGCATTCACGGTCTTCCTCGTGGGCATTGTCCGTGAACGTTCCCAAAGCCAGAAGTGCAGAGTCTCAGGCATGGAGATCAAATGAAGATCACACTAAAGAAAACAAGTTACTGTTTCAGACAAGGGTGGTGGTGAAAGATGATTGCATCAGCATTGAAGGCGGAGGTGCCCCTAATGTTTTGTTCAAAGGTAAGCCTGAGGCAATGGGCTCCAAGAATAAATTCAATTGTGACATAGTAGATCTCCCTATGGTCCTTCTGTTACAGGTAGCTAGCCAGATCATATACTGGCTACACGAGGAGGCATTGACGGTGGGGATAAAAACAAACCAGGATTTTCTCTGCCTTTCCTTGGAGCTTGAACAAGGGGAGACACTAAGCCTGGTTGCGCATGTTGATCCGGAGGATGAACTGGGATGCATCTCTTGGTGGCTTACGGTGGATGATGGGTCTACCGAGGAGCACAAACTTCAGGCAGATATCCCTGATGGTGAGTCTCCTTCAAGGCGGTTTTTGGGTCATTTGTCTTTGAATGCGTTATACTCCACATTGATGGATCTTGTTAGTTTGTGCAATGTCAGTGTTAGCCATTGAATCTGGCCTTGTTTTGCTTCACACATCAATGGAAATGTATACTAGTATTTGTGTTTTAGGTGTTTAGCAGCCTATGAGAAATGTGCATGAATTGAACTGACTAAATTTCACTATACGTATGCTATGGTGTTTAGCAGCCTATTTTTCTTGCAATTTGTTACAGGATATTACTTATTTGTAGAATCATGCTTTCAATGTACAGTTCTGTTGCACAATCACCAGTCCCCTAAGGAAATCTGCTGTTAGATAAAATTATAATTTATTGGTGGAAGTATATTGAATTTTCTCGTTGATCATAAGCATAGGCCTGTGTATCAATTTTTCTGTTAAGTTTCCTTAGGGCGCATTTTGATAAACATATGCTCTCTTTGCCAAGAAAATCTGATTTCCAATTTCTCTGTTAAGTTTCCTTAAGGCGCATTTTGATAAACAAATCCTCTCTTTGCCAAGAAAATCTGATTTGAAATGATAAAGAATTGATTATGATCTCCCTGTTTACTCTTGTCATTTGTTGAGGCTCAAGTCTTAATGACACCGT
Coding sequence (CDS)
ATGGCGGACGGCGGAGCCATGGAAATATCTCTCGACAAGCTCCCTATCAAACGCCTCGATGCTATCGAAGAATCCGGCGTCGAACGCTTCCCACCTGAAATCGAATACGAAGAGAAAGCGGTGAATCTAATTCGGAGAGTGGATTTCGCTTGGGCGTTGGAAAGAGATGCGAAGAAGCAGAAGAAGGCGAAGGAAGCATCGGCGCCATCCACGTGGCAAGGATTGGTTGAGAATTTGACATTGGCTCATCAGGAGCTCTCTGTAATCATTGATCTCATAAACACTGTTGAAGCTAATGATGCAGTCACAGTGGCTCATATGAATAGGCCAAAACCATTGCCTAATGAAGCCATGTCCGACCTTGCAGTGTCTGCTGCAACTAAGCTACAATGTTATCGGCATCTCAGTAAGTACTTTAAGCAGTCTGCGAAATCCTTGGAACATCAGATTGCTAGAGAAGCAAGATTCTACGGAGCTCTCATTCGTTTGCAGCAGAATTGGAAAGTCAAATGGCATCGTTTGGCTGCAACTGCTCCTGGTAGTGACGGTTTTCTGATCGATCTTTCCAACAACGCAGCACATGAGCAGCCAGCTGTTCCCCGAGCTCCGACGTTTTCTATGGTCCGTGTGGACCATGATTCATCTGGCATGTTGGCTGTGAATTTGCCTAAAAATTCATGTCGCTCTTTCCACTTTGGTTTTCTGGATGCTCAATCGGGTGATAGTGATAGTCCAGAAGGATGTGGGAGAATGAATTTAGATACAGGTGATAGTCCAAAAGAATCAAGTGACGATGATCGTATACGAGAAACGCACACCGTCCTTTGTAACACCCACAGGGCCATATTTTATGAACAGGTGTTTGAATTAGTCAGTCGTGAATCCTTTAATCCATCTTTGGGGGTAAACGTGACTGGAATACGAGAAAACTATTTGGAACTGAGCATAAAACCAGGTGTATCTGTTTTCATATTGCTAAGGCCATACAATCAGGAAGATCAAGGTAAAAACAACAGTGACACTCAGAACGTGGATGATTTAGCTAAAGGATCAAGCTTGGTGGAAAGCAAGCAACATATTAAGTTAATATCTGGACACCCCAACCCCATCACTTATGAAATATATCTGCAGCAGCTTTTCCGTAATGAAATATTTTCAAAGGTGAAGCACCAACCAACCTTACCTGGTAAAGTTCAGTCTAATCAGCAGACAAATGATGCTGCGGGTCTTGTAAATCATTTCTGCCTTTCTCTGGCTCATCGAACCTTCTCAAGCAAAGTTCTAGTGGAGCTGGAAAACCTGGTTACCAAAATCCCATATCTCCGGCTTATATCTCAACCTACTTGGCATTCACGGTCTTCCTCGTGGGCATTGTCCGTGAACGTTCCCAAAGCCAGAAGTGCAGAGTCTCAGGCATGGAGATCAAATGAAGATCACACTAAAGAAAACAAGTTACTGTTTCAGACAAGGGTGGTGGTGAAAGATGATTGCATCAGCATTGAAGGCGGAGGTGCCCCTAATGTTTTGTTCAAAGGTAAGCCTGAGGCAATGGGCTCCAAGAATAAATTCAATTGTGACATAGTAGATCTCCCTATGGTCCTTCTGTTACAGGTAGCTAGCCAGATCATATACTGGCTACACGAGGAGGCATTGACGGTGGGGATAAAAACAAACCAGGATTTTCTCTGCCTTTCCTTGGAGCTTGAACAAGGGGAGACACTAAGCCTGGTTGCGCATGTTGATCCGGAGGATGAACTGGGATGCATCTCTTGGTGGCTTACGGTGGATGATGGGTCTACCGAGGAGCACAAACTTCAGGCAGATATCCCTGATGGTGAGTCTCCTTCAAGGCGGTTTTTGGGTCATTTGTCTTTGAATGCGTTATACTCCACATTGATGGATCTTGTTAGTTTGTGCAATGTCAGTGTTAGCCATTGA
Protein sequence
MADGGAMEISLDKLPIKRLDAIEESGVERFPPEIEYEEKAVNLIRRVDFAWALERDAKKQKKAKEASAPSTWQGLVENLTLAHQELSVIIDLINTVEANDAVTVAHMNRPKPLPNEAMSDLAVSAATKLQCYRHLSKYFKQSAKSLEHQIAREARFYGALIRLQQNWKVKWHRLAATAPGSDGFLIDLSNNAAHEQPAVPRAPTFSMVRVDHDSSGMLAVNLPKNSCRSFHFGFLDAQSGDSDSPEGCGRMNLDTGDSPKESSDDDRIRETHTVLCNTHRAIFYEQVFELVSRESFNPSLGVNVTGIRENYLELSIKPGVSVFILLRPYNQEDQGKNNSDTQNVDDLAKGSSLVESKQHIKLISGHPNPITYEIYLQQLFRNEIFSKVKHQPTLPGKVQSNQQTNDAAGLVNHFCLSLAHRTFSSKVLVELENLVTKIPYLRLISQPTWHSRSSSWALSVNVPKARSAESQAWRSNEDHTKENKLLFQTRVVVKDDCISIEGGGAPNVLFKGKPEAMGSKNKFNCDIVDLPMVLLLQVASQIIYWLHEEALTVGIKTNQDFLCLSLELEQGETLSLVAHVDPEDELGCISWWLTVDDGSTEEHKLQADIPDGESPSRRFLGHLSLNALYSTLMDLVSLCNVSVSH
Homology
BLAST of Spo08568.1 vs. NCBI nr
Match:
gi|902225123|gb|KNA19964.1| (hypothetical protein SOVF_056540 [Spinacia oleracea])
HSP 1 Score: 1288.9 bits (3334), Expect = 0.000e+0
Identity = 644/645 (99.84%), Postives = 645/645 (100.00%), Query Frame = 1
Query: 1 MADGGAMEISLDKLPIKRLDAIEESGVERFPPEIEYEEKAVNLIRRVDFAWALERDAKKQ 60
MADGGAMEISLDKLPIKRLDAIEESGVERFPPEIEYEEKAVNLIRRVDFAWALERDAKKQ
Sbjct: 1 MADGGAMEISLDKLPIKRLDAIEESGVERFPPEIEYEEKAVNLIRRVDFAWALERDAKKQ 60
Query: 61 KKAKEASAPSTWQGLVENLTLAHQELSVIIDLINTVEANDAVTVAHMNRPKPLPNEAMSD 120
KKAKEASAPSTWQGLVENLTLAHQELSVIIDLINTVEANDAVTVAHMNRPKPLPNEAMSD
Sbjct: 61 KKAKEASAPSTWQGLVENLTLAHQELSVIIDLINTVEANDAVTVAHMNRPKPLPNEAMSD 120
Query: 121 LAVSAATKLQCYRHLSKYFKQSAKSLEHQIAREARFYGALIRLQQNWKVKWHRLAATAPG 180
LAVSAATKLQCYRHLSKYFKQSAKSLEHQIAREARFYGALIRLQQNWKVKWHRLAATAPG
Sbjct: 121 LAVSAATKLQCYRHLSKYFKQSAKSLEHQIAREARFYGALIRLQQNWKVKWHRLAATAPG 180
Query: 181 SDGFLIDLSNNAAHEQPAVPRAPTFSMVRVDHDSSGMLAVNLPKNSCRSFHFGFLDAQSG 240
SDGFLIDLSNNAAHEQPAVPRAPTFSMVRVDHDSSGMLAVNLPKNSCRSFHFGFLDAQSG
Sbjct: 181 SDGFLIDLSNNAAHEQPAVPRAPTFSMVRVDHDSSGMLAVNLPKNSCRSFHFGFLDAQSG 240
Query: 241 DSDSPEGCGRMNLDTGDSPKESSDDDRIRETHTVLCNTHRAIFYEQVFELVSRESFNPSL 300
DSDSPEGCGRMNLDTGDSPKESSDDDRIRETHTVLCNTHRAIFYEQVFELVSRESFNPSL
Sbjct: 241 DSDSPEGCGRMNLDTGDSPKESSDDDRIRETHTVLCNTHRAIFYEQVFELVSRESFNPSL 300
Query: 301 GVNVTGIRENYLELSIKPGVSVFILLRPYNQEDQGKNNSDTQNVDDLAKGSSLVESKQHI 360
GVNVTGIRENYLELSIKPGVSVFILLRPYNQEDQGKN+SDTQNVDDLAKGSSLVESKQHI
Sbjct: 301 GVNVTGIRENYLELSIKPGVSVFILLRPYNQEDQGKNSSDTQNVDDLAKGSSLVESKQHI 360
Query: 361 KLISGHPNPITYEIYLQQLFRNEIFSKVKHQPTLPGKVQSNQQTNDAAGLVNHFCLSLAH 420
KLISGHPNPITYEIYLQQLFRNEIFSKVKHQPTLPGKVQSNQQTNDAAGLVNHFCLSLAH
Sbjct: 361 KLISGHPNPITYEIYLQQLFRNEIFSKVKHQPTLPGKVQSNQQTNDAAGLVNHFCLSLAH 420
Query: 421 RTFSSKVLVELENLVTKIPYLRLISQPTWHSRSSSWALSVNVPKARSAESQAWRSNEDHT 480
RTFSSKVLVELENLVTKIPYLRLISQPTWHSRSSSWALSVNVPKARSAESQAWRSNEDHT
Sbjct: 421 RTFSSKVLVELENLVTKIPYLRLISQPTWHSRSSSWALSVNVPKARSAESQAWRSNEDHT 480
Query: 481 KENKLLFQTRVVVKDDCISIEGGGAPNVLFKGKPEAMGSKNKFNCDIVDLPMVLLLQVAS 540
KENKLLFQTRVVVKDDCISIEGGGAPNVLFKGKPEAMGSKNKFNCDIVDLPMVLLLQVAS
Sbjct: 481 KENKLLFQTRVVVKDDCISIEGGGAPNVLFKGKPEAMGSKNKFNCDIVDLPMVLLLQVAS 540
Query: 541 QIIYWLHEEALTVGIKTNQDFLCLSLELEQGETLSLVAHVDPEDELGCISWWLTVDDGST 600
QIIYWLHEEALTVGIKTNQDFLCLSLELEQGETLSLVAHVDPEDELGCISWWLTVDDGST
Sbjct: 541 QIIYWLHEEALTVGIKTNQDFLCLSLELEQGETLSLVAHVDPEDELGCISWWLTVDDGST 600
Query: 601 EEHKLQADIPDGESPSRRFLGHLSLNALYSTLMDLVSLCNVSVSH 646
EEHKLQADIPDGESPSRRFLGHLSLNALYSTLMDLVSLCNVSVSH
Sbjct: 601 EEHKLQADIPDGESPSRRFLGHLSLNALYSTLMDLVSLCNVSVSH 645
BLAST of Spo08568.1 vs. NCBI nr
Match:
gi|731353377|ref|XP_010688034.1| (PREDICTED: mediator of RNA polymerase II transcription subunit 17 [Beta vulgaris subsp. vulgaris])
HSP 1 Score: 1083.9 bits (2802), Expect = 0.000e+0
Identity = 546/654 (83.49%), Postives = 591/654 (90.37%), Query Frame = 1
Query: 1 MADGGAMEISLDKLPIKRLDAIEESGVERFPPEIEYEEKAVNLIRRVDFAWALERDAKKQ 60
MADGG MEISLDKLPIKRLD IEESG+ERFPPEIEYEEK VNLIRR+DFAWALERD+KKQ
Sbjct: 1 MADGGDMEISLDKLPIKRLDIIEESGLERFPPEIEYEEKTVNLIRRIDFAWALERDSKKQ 60
Query: 61 KKAKEASAPSTWQGLVENLTLAHQELSVIIDLINTVEANDAVTVAHMNRPKPLPNEAMSD 120
KKAKEASAPSTWQG++ENL AHQELSVIIDLINTVEANDAVTVAHMNRPKPLPNE+++D
Sbjct: 61 KKAKEASAPSTWQGMIENLKSAHQELSVIIDLINTVEANDAVTVAHMNRPKPLPNESLND 120
Query: 121 LAVSAATKLQCYRHLSKYFKQSAKSLEHQIAREARFYGALIRLQQNWKVKWHRLAATAPG 180
LAVSAATKLQCYRHLSKYFKQSAKSLEHQI+REARFYGALIRLQQNWKVKWHRLAA AP
Sbjct: 121 LAVSAATKLQCYRHLSKYFKQSAKSLEHQISREARFYGALIRLQQNWKVKWHRLAANAPS 180
Query: 181 SDGFLIDLSNNAAHEQPAVPRAPTFSMVRVDHDSSGMLAVNLPKNSCRSFHFGFLDAQSG 240
SDGFLIDLSN AAHEQ AV RAP FSMVRVDHDSSGMLAVNL K+SCRSFHFGFLDA
Sbjct: 181 SDGFLIDLSNKAAHEQSAVARAPAFSMVRVDHDSSGMLAVNLSKSSCRSFHFGFLDAH-- 240
Query: 241 DSDSPEGCGRMNLDTG------DSPKESSDDDRIRETHTVLCNTHRAIFYEQVFELVSRE 300
DSPEG +MN+ T D SDDDR+RETHTVLC+ HRAIFYEQVFELVSRE
Sbjct: 241 PVDSPEGSEKMNVHTAEESLREDKKDPLSDDDRVRETHTVLCDAHRAIFYEQVFELVSRE 300
Query: 301 SFNPSLGVNVTGIRENYLELSIKPGVSVFILLRPYNQEDQGKNNSDTQNVDDLAKGSSLV 360
SFNPSLGVNVTGIRENYLELSIKPGVSVFI L PYNQEDQG ++SDTQ+VDDL+KGSS+V
Sbjct: 301 SFNPSLGVNVTGIRENYLELSIKPGVSVFISLMPYNQEDQGTDSSDTQDVDDLSKGSSMV 360
Query: 361 ESKQHIKLISGHPNPITYEIYLQQLFRNEIFSKVKHQPTLPGKVQSNQQTNDAAGLVNHF 420
SKQ++K +SGH NPITYEIYLQ+LF +EIF+KVKHQ LPGKVQS+Q NDAAGLVNHF
Sbjct: 361 VSKQNMKPLSGHSNPITYEIYLQKLFHDEIFTKVKHQSALPGKVQSSQPQNDAAGLVNHF 420
Query: 421 CLSLAHRTFSSKVLVELENLVTKIPYLRLISQPTWHSRSSSWALSVNVPK-ARSAESQAW 480
CLSLAHR FS+KVL ELENLVTKIPYL+LISQPTWHSR+SSWALSV VP+ +A+ QAW
Sbjct: 421 CLSLAHRDFSNKVLTELENLVTKIPYLQLISQPTWHSRTSSWALSVKVPEVVFNAQCQAW 480
Query: 481 RSNEDHTKENKLLFQTRVVVKDDCISIEGGGAPNV--LFKGKPEAMGSKNKFNCDIVDLP 540
RS+ED K+NKLLFQTRVVVKDDCI+IEGGGAPNV LFKG P+AMGSKN+FNCD+VDLP
Sbjct: 481 RSDEDQIKDNKLLFQTRVVVKDDCINIEGGGAPNVVGLFKGNPDAMGSKNRFNCDLVDLP 540
Query: 541 MVLLLQVASQIIYWLHEEALTVGIKTNQDFLCLSLELEQGETLSLVAHVDPEDELGCISW 600
MVLLLQ+ASQII WLHEEAL VGIKTN+DFLCLSLELEQGE LSLVAHVDPEDELGCISW
Sbjct: 541 MVLLLQIASQIISWLHEEALMVGIKTNRDFLCLSLELEQGEKLSLVAHVDPEDELGCISW 600
Query: 601 WLTVDDGSTEEHKLQADIPDGESPSRRFLGHLSLNALYSTLMDLVSLCNVSVSH 646
WL V+DGSTEEH LQAD+PDGESPSRRFLGHLSL+ALYSTLMDLVS+C SV+H
Sbjct: 601 WLMVEDGSTEEHTLQADLPDGESPSRRFLGHLSLDALYSTLMDLVSMCTGSVNH 652
BLAST of Spo08568.1 vs. NCBI nr
Match:
gi|225445450|ref|XP_002285089.1| (PREDICTED: mediator of RNA polymerase II transcription subunit 17 [Vitis vinifera])
HSP 1 Score: 754.2 bits (1946), Expect = 1.900e-214
Identity = 395/658 (60.03%), Postives = 489/658 (74.32%), Query Frame = 1
Query: 5 GAMEISLDKLPIKRLDAIEESGVERFPPEIEYEEKAVNLIRRVDFAWALERDAKKQKKA- 64
G MEISLDKLPIKRLDAIEE+G ERFP ++ Y++K V+LIRR+DFAWA+E+D KKQKKA
Sbjct: 3 GKMEISLDKLPIKRLDAIEENGAERFPTDVGYDDKRVSLIRRIDFAWAVEKDTKKQKKAS 62
Query: 65 KEASAPSTWQGLVENLTLAHQELSVIIDLINTVEANDAVTVAHMNRPKPLPNEAMSDLAV 124
KE + P WQ LVENL LAHQELSVIIDLI+TVEANDAVTVA M RPKPLPNE +SDL V
Sbjct: 63 KEEATPWPWQSLVENLRLAHQELSVIIDLISTVEANDAVTVASMTRPKPLPNEVLSDLGV 122
Query: 125 SAATKLQCYRHLSKYFKQSAKSLEHQIAREARFYGALIRLQQNWKVKWHRLAATAPGSDG 184
SAATKLQC+RHLSKYFKQSAK+LE QIAREARFYGALIRLQQNWKVK R+AA+APG++G
Sbjct: 123 SAATKLQCFRHLSKYFKQSAKALEQQIAREARFYGALIRLQQNWKVKRQRVAASAPGNEG 182
Query: 185 FLIDLSNNAAHEQPAVPRAPTFSMVRVDHDSSGMLAVNLPKNSCRSFHFGFLDAQSG--- 244
F IDL +N+ H+ AV R + S VRVDHDS+GMLAV+LP NSCR+ HFGFL G
Sbjct: 183 FSIDLFSNSLHDPVAVFRPSSLSTVRVDHDSAGMLAVHLPPNSCRALHFGFLGGHLGNIP 242
Query: 245 -DSDSPEGCGRMNLDTGDSPKESSDDDRIRETHTVLCNTHRAIFYEQVFELVSRESFNPS 304
+ + G L + + K SD++ ++ETH+VL H+AIF EQVF+LV+RE+FN S
Sbjct: 243 KEPSKTKTYGPDELPSKEIKKPLSDNECVKETHSVLREGHQAIFDEQVFDLVNREAFNSS 302
Query: 305 LGVNVTGIRENYLELSIKPGVSVFILLRPYNQEDQGKNNSDTQNVD------DLAKGSSL 364
GVNVTGIRENYL+L+I G SVF+ L P Q+++ + QN++ D G L
Sbjct: 303 SGVNVTGIRENYLQLNIGQGASVFMSLVPSGQDEKTADGMGMQNLESAILPMDTFDGVKL 362
Query: 365 VESK-QHIKLISGHPNPITYEIYLQQLFRNEIFSKVKHQPTLPGKVQ-SNQQTNDAAGLV 424
+ K + K SG PN I+ EIYL+QLF +F + K + G+ Q S+Q D GL+
Sbjct: 363 SDGKHDNDKKKSGFPNRISSEIYLKQLFHEHVFVRAKDKHISAGRTQPSSQPAKDGFGLL 422
Query: 425 NHFCLSLAHRTFSSKVLVELENLVTKIPYLRLISQPTWHSRSSSWALSVNVPKARSAESQ 484
HFC+SLAHR FSSKVL+ELENLV+++PYL L+S PTWHSR+SSW L + VP++
Sbjct: 423 GHFCMSLAHRIFSSKVLMELENLVSRVPYLHLLSHPTWHSRTSSWTLLMKVPESSFHPGC 482
Query: 485 AWRSNEDHTKEN--KLLFQTRVVVKDDCISIEGGGAPNV--LFKGKPEAMGSKNKFNCDI 544
R+++ H +N K F+T+VV+ DDCI++EG GAPNV LFKG E + S N+++CD+
Sbjct: 483 QTRTSDIHNVKNIIKTHFRTKVVINDDCINVEGDGAPNVVGLFKGSSEDVCSMNRYDCDL 542
Query: 545 VDLPMVLLLQVASQIIYWLHEEALTVGIKTNQDFLCLSLELEQGETLSLVAHVDPEDELG 604
D+P++LL QVASQ+I WLHEEAL VGIK N+DFLCLS E++QGE LSLVAHV+P+D G
Sbjct: 543 ADIPVILLQQVASQVIRWLHEEALKVGIKANRDFLCLSFEMDQGEMLSLVAHVNPDDPQG 602
Query: 605 CISWWLTVDDGSTEEHKLQADIPDGESPSRRFLGHLSLNALYSTLMDLVSLCNVSVSH 646
CISWWL +DDG +E+ K D PDG S R+FLGHLSL LYSTLMDLVSLCN H
Sbjct: 603 CISWWLVMDDGFSEDLKFHTDAPDGGSEYRKFLGHLSLEVLYSTLMDLVSLCNGGGRH 660
BLAST of Spo08568.1 vs. NCBI nr
Match:
gi|568843864|ref|XP_006475818.1| (PREDICTED: mediator of RNA polymerase II transcription subunit 17 [Citrus sinensis])
HSP 1 Score: 740.0 bits (1909), Expect = 3.600e-210
Identity = 390/657 (59.36%), Postives = 480/657 (73.06%), Query Frame = 1
Query: 5 GAMEISLDKLPIKRLDAIEESGVERFPPEIEYEEKAVNLIRRVDFAWALERDAKKQ--KK 64
G +EIS+DKLP+KRLDAIEE+G ERFPP++ Y+EK +LIRR+DFAWA+E+D K+ K
Sbjct: 3 GNLEISVDKLPVKRLDAIEETGAERFPPDVGYDEKRESLIRRIDFAWAVEKDDNKRLKKS 62
Query: 65 AKEASAPST-----WQGLVENLTLAHQELSVIIDLINTVEANDAVTVAHMNRPKPLPNEA 124
+KE+S+ +T WQ +VENL AHQELSVIIDLINTVEANDAVTVA M RPK LPNE
Sbjct: 63 SKESSSSATTTPWQWQNMVENLQFAHQELSVIIDLINTVEANDAVTVAGMTRPKALPNEV 122
Query: 125 MSDLAVSAATKLQCYRHLSKYFKQSAKSLEHQIAREARFYGALIRLQQNWKVKWHRLAAT 184
+SDL+VSAATKLQCYRHL YFKQSAKSLE QIA+EARFYGALIRLQQNWKVK R+AA
Sbjct: 123 LSDLSVSAATKLQCYRHLGIYFKQSAKSLEQQIAKEARFYGALIRLQQNWKVKRQRVAAP 182
Query: 185 APGSDGFLIDLSNNAAHEQPAVPRAPTFSMVRVDHDSSGMLAVNLPKNSCRSFHFGFLDA 244
A G++GF IDL +N+ ++ V R + S +R+DHDS+GMLA+NLP NSCRSF FGFL
Sbjct: 183 ASGNEGFTIDLFDNSLYDSAPVSRPSSLSTIRIDHDSAGMLAINLPPNSCRSFRFGFLGV 242
Query: 245 QSGDSDSPEGCGRMNLDTGDSP----KES-SDDDRIRETHTVLCNTHRAIFYEQVFELVS 304
QSGDS + C ++ P KES +DD+ +RE H++L H+AIFYEQVF++V+
Sbjct: 243 QSGDSS--KQCSKVKNSCSPRPSKEAKESVNDDECVREKHSLLREVHQAIFYEQVFDIVN 302
Query: 305 RESFNPSLGVNVTGIRENYLELSIKPGVSVFILLRPYNQEDQGKNNSDTQNVD------D 364
RE+F SLGVNVTGIRENYL+L I G+S+F+ L P NQ D ++ QNV+ D
Sbjct: 303 REAFKQSLGVNVTGIRENYLQLGIGLGISIFLSLIPSNQGDLSVDSWVNQNVESGILPLD 362
Query: 365 LAKGSSLVESKQHI-KLISGHPNPITYEIYLQQLFRNEIFSKVKHQPTLPGKVQSNQQTN 424
G L E K I + G+PNP+TYEIYLQQ+F ++ + K++P G S T
Sbjct: 363 SHDGVKLAEEKDDILRKSGGYPNPLTYEIYLQQVFHEYLYGRAKNKPISTGTRVSGPPTK 422
Query: 425 DAAGLVNHFCLSLAHRTFSSKVLVELENLVTKIPYLRLISQPTWHSRSSSWALSVNVPKA 484
D +GL+ HFCLSLAHR FS+KV VELEN V +PYL L+S PTWHSR+SSW + + VP++
Sbjct: 423 DGSGLLGHFCLSLAHRIFSNKVHVELENAVCGVPYLHLVSHPTWHSRTSSWTVFLKVPQS 482
Query: 485 -RSAESQAWRSNEDHTKENKLLFQTRVVVKDDCISIEGGGAPNV--LFKGKPEAMGSKNK 544
AE SN + K F+T VVV DDCI +EG G PNV LFKG+ E M S NK
Sbjct: 483 ILHAE-----SNSRTAETAKSHFRTNVVVNDDCIHVEGEGTPNVVGLFKGRSEDMSSMNK 542
Query: 545 FNCDIVDLPMVLLLQVASQIIYWLHEEALTVGIKTNQDFLCLSLELEQGETLSLVAHVDP 604
++CD+ DLP+++L QVASQ+I WLHEEAL VGIK N+DFL LS EL+QGET+SLVAHVDP
Sbjct: 543 YDCDLADLPVIILQQVASQVIRWLHEEALMVGIKANRDFLSLSFELDQGETVSLVAHVDP 602
Query: 605 EDELGCISWWLTVDDGSTEEHKLQADIPDGESPSRRFLGHLSLNALYSTLMDLVSLC 640
ED GCISWWL ++DG E KL DI D S ++FLGHLSL+ LYSTLMDLVSLC
Sbjct: 603 EDMRGCISWWLVMEDGFAAERKLSIDISDDASDYKKFLGHLSLDVLYSTLMDLVSLC 652
BLAST of Spo08568.1 vs. NCBI nr
Match:
gi|567917928|ref|XP_006450970.1| (hypothetical protein CICLE_v10007689mg [Citrus clementina])
HSP 1 Score: 739.6 bits (1908), Expect = 4.700e-210
Identity = 389/657 (59.21%), Postives = 481/657 (73.21%), Query Frame = 1
Query: 5 GAMEISLDKLPIKRLDAIEESGVERFPPEIEYEEKAVNLIRRVDFAWALERDAKKQ--KK 64
G +EIS+DKLP+KRLDAIEE+G ERFPP++ Y+EK +LIRR+DFAWA+E+D K+ K+
Sbjct: 3 GNLEISVDKLPVKRLDAIEETGAERFPPDVGYDEKRESLIRRIDFAWAVEKDDNKRLKKR 62
Query: 65 AKEASAPST-----WQGLVENLTLAHQELSVIIDLINTVEANDAVTVAHMNRPKPLPNEA 124
+KE+S+ +T WQ +VENL AHQELSVIIDLINTVEANDAVTVA M RPK LPNE
Sbjct: 63 SKESSSSATTTPWQWQNMVENLQFAHQELSVIIDLINTVEANDAVTVAGMTRPKALPNEV 122
Query: 125 MSDLAVSAATKLQCYRHLSKYFKQSAKSLEHQIAREARFYGALIRLQQNWKVKWHRLAAT 184
+SDL+VSAATKLQCYRHL YFKQSAKSLE QIA+EARFYGALIRLQQNWKVK R+AA
Sbjct: 123 LSDLSVSAATKLQCYRHLGIYFKQSAKSLEQQIAKEARFYGALIRLQQNWKVKRQRVAAP 182
Query: 185 APGSDGFLIDLSNNAAHEQPAVPRAPTFSMVRVDHDSSGMLAVNLPKNSCRSFHFGFLDA 244
A G++GF IDL +N+ ++ V R + S +R+DHDS+GMLA+NLP NSCRSF FGFL
Sbjct: 183 ASGNEGFTIDLFDNSLYDSAPVSRPSSLSTIRIDHDSAGMLAINLPPNSCRSFRFGFLGV 242
Query: 245 QSGDSDSPEGCGRMNLDTGDSP----KES-SDDDRIRETHTVLCNTHRAIFYEQVFELVS 304
QSGDS + C ++ P KES +DD+ +RE H++L H+AIFYEQVF++V+
Sbjct: 243 QSGDSS--KQCSKVKNSCSPRPSKEAKESVNDDECVREKHSLLREVHQAIFYEQVFDIVN 302
Query: 305 RESFNPSLGVNVTGIRENYLELSIKPGVSVFILLRPYNQEDQGKNNSDTQNVD------D 364
RE+F SLGVNVTGIRENYL+L I G+S+F+ L P NQ D ++ QNV+ D
Sbjct: 303 REAFKQSLGVNVTGIRENYLQLGIGLGISIFLSLIPSNQGDLSVDSWVNQNVESGILPLD 362
Query: 365 LAKGSSLVESKQHI-KLISGHPNPITYEIYLQQLFRNEIFSKVKHQPTLPGKVQSNQQTN 424
G L E K I + G+PNP+TYEIYLQQ+F ++ + K++P G S T
Sbjct: 363 SHDGVKLAEEKDDILRKSGGYPNPLTYEIYLQQVFHEYLYGRAKNKPISTGTRVSGPPTK 422
Query: 425 DAAGLVNHFCLSLAHRTFSSKVLVELENLVTKIPYLRLISQPTWHSRSSSWALSVNVPKA 484
D +GL+ HFCLSLAHR FS+KV VELEN V +PYL L+S PTWHSR+SSW + + VP++
Sbjct: 423 DGSGLLGHFCLSLAHRIFSNKVRVELENAVCGVPYLHLVSHPTWHSRTSSWTVFLKVPQS 482
Query: 485 -RSAESQAWRSNEDHTKENKLLFQTRVVVKDDCISIEGGGAPNV--LFKGKPEAMGSKNK 544
AE SN + K F+T VVV DDCI +EG G PNV LF+G+ E M S NK
Sbjct: 483 ILHAE-----SNSRTAETAKSHFRTNVVVNDDCIHVEGEGTPNVVGLFEGRSEDMSSMNK 542
Query: 545 FNCDIVDLPMVLLLQVASQIIYWLHEEALTVGIKTNQDFLCLSLELEQGETLSLVAHVDP 604
++CD+ DLP+++L QVASQ+I WLHEEAL VGIK N+DFL LS EL+QGET+SLVAHVDP
Sbjct: 543 YDCDLADLPVIILQQVASQVIRWLHEEALMVGIKANRDFLSLSFELDQGETVSLVAHVDP 602
Query: 605 EDELGCISWWLTVDDGSTEEHKLQADIPDGESPSRRFLGHLSLNALYSTLMDLVSLC 640
ED GCISWWL ++DG E KL DI D S ++FLGHLSL+ LYSTLMDLVSLC
Sbjct: 603 EDMRGCISWWLVMEDGFAAERKLSIDISDDASDYKKFLGHLSLDVLYSTLMDLVSLC 652
BLAST of Spo08568.1 vs. UniProtKB/TrEMBL
Match:
A0A0K9RM13_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_056540 PE=4 SV=1)
HSP 1 Score: 1288.9 bits (3334), Expect = 0.000e+0
Identity = 644/645 (99.84%), Postives = 645/645 (100.00%), Query Frame = 1
Query: 1 MADGGAMEISLDKLPIKRLDAIEESGVERFPPEIEYEEKAVNLIRRVDFAWALERDAKKQ 60
MADGGAMEISLDKLPIKRLDAIEESGVERFPPEIEYEEKAVNLIRRVDFAWALERDAKKQ
Sbjct: 1 MADGGAMEISLDKLPIKRLDAIEESGVERFPPEIEYEEKAVNLIRRVDFAWALERDAKKQ 60
Query: 61 KKAKEASAPSTWQGLVENLTLAHQELSVIIDLINTVEANDAVTVAHMNRPKPLPNEAMSD 120
KKAKEASAPSTWQGLVENLTLAHQELSVIIDLINTVEANDAVTVAHMNRPKPLPNEAMSD
Sbjct: 61 KKAKEASAPSTWQGLVENLTLAHQELSVIIDLINTVEANDAVTVAHMNRPKPLPNEAMSD 120
Query: 121 LAVSAATKLQCYRHLSKYFKQSAKSLEHQIAREARFYGALIRLQQNWKVKWHRLAATAPG 180
LAVSAATKLQCYRHLSKYFKQSAKSLEHQIAREARFYGALIRLQQNWKVKWHRLAATAPG
Sbjct: 121 LAVSAATKLQCYRHLSKYFKQSAKSLEHQIAREARFYGALIRLQQNWKVKWHRLAATAPG 180
Query: 181 SDGFLIDLSNNAAHEQPAVPRAPTFSMVRVDHDSSGMLAVNLPKNSCRSFHFGFLDAQSG 240
SDGFLIDLSNNAAHEQPAVPRAPTFSMVRVDHDSSGMLAVNLPKNSCRSFHFGFLDAQSG
Sbjct: 181 SDGFLIDLSNNAAHEQPAVPRAPTFSMVRVDHDSSGMLAVNLPKNSCRSFHFGFLDAQSG 240
Query: 241 DSDSPEGCGRMNLDTGDSPKESSDDDRIRETHTVLCNTHRAIFYEQVFELVSRESFNPSL 300
DSDSPEGCGRMNLDTGDSPKESSDDDRIRETHTVLCNTHRAIFYEQVFELVSRESFNPSL
Sbjct: 241 DSDSPEGCGRMNLDTGDSPKESSDDDRIRETHTVLCNTHRAIFYEQVFELVSRESFNPSL 300
Query: 301 GVNVTGIRENYLELSIKPGVSVFILLRPYNQEDQGKNNSDTQNVDDLAKGSSLVESKQHI 360
GVNVTGIRENYLELSIKPGVSVFILLRPYNQEDQGKN+SDTQNVDDLAKGSSLVESKQHI
Sbjct: 301 GVNVTGIRENYLELSIKPGVSVFILLRPYNQEDQGKNSSDTQNVDDLAKGSSLVESKQHI 360
Query: 361 KLISGHPNPITYEIYLQQLFRNEIFSKVKHQPTLPGKVQSNQQTNDAAGLVNHFCLSLAH 420
KLISGHPNPITYEIYLQQLFRNEIFSKVKHQPTLPGKVQSNQQTNDAAGLVNHFCLSLAH
Sbjct: 361 KLISGHPNPITYEIYLQQLFRNEIFSKVKHQPTLPGKVQSNQQTNDAAGLVNHFCLSLAH 420
Query: 421 RTFSSKVLVELENLVTKIPYLRLISQPTWHSRSSSWALSVNVPKARSAESQAWRSNEDHT 480
RTFSSKVLVELENLVTKIPYLRLISQPTWHSRSSSWALSVNVPKARSAESQAWRSNEDHT
Sbjct: 421 RTFSSKVLVELENLVTKIPYLRLISQPTWHSRSSSWALSVNVPKARSAESQAWRSNEDHT 480
Query: 481 KENKLLFQTRVVVKDDCISIEGGGAPNVLFKGKPEAMGSKNKFNCDIVDLPMVLLLQVAS 540
KENKLLFQTRVVVKDDCISIEGGGAPNVLFKGKPEAMGSKNKFNCDIVDLPMVLLLQVAS
Sbjct: 481 KENKLLFQTRVVVKDDCISIEGGGAPNVLFKGKPEAMGSKNKFNCDIVDLPMVLLLQVAS 540
Query: 541 QIIYWLHEEALTVGIKTNQDFLCLSLELEQGETLSLVAHVDPEDELGCISWWLTVDDGST 600
QIIYWLHEEALTVGIKTNQDFLCLSLELEQGETLSLVAHVDPEDELGCISWWLTVDDGST
Sbjct: 541 QIIYWLHEEALTVGIKTNQDFLCLSLELEQGETLSLVAHVDPEDELGCISWWLTVDDGST 600
Query: 601 EEHKLQADIPDGESPSRRFLGHLSLNALYSTLMDLVSLCNVSVSH 646
EEHKLQADIPDGESPSRRFLGHLSLNALYSTLMDLVSLCNVSVSH
Sbjct: 601 EEHKLQADIPDGESPSRRFLGHLSLNALYSTLMDLVSLCNVSVSH 645
BLAST of Spo08568.1 vs. UniProtKB/TrEMBL
Match:
A0A0J8BNG7_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g194810 PE=4 SV=1)
HSP 1 Score: 1083.9 bits (2802), Expect = 0.000e+0
Identity = 546/654 (83.49%), Postives = 591/654 (90.37%), Query Frame = 1
Query: 1 MADGGAMEISLDKLPIKRLDAIEESGVERFPPEIEYEEKAVNLIRRVDFAWALERDAKKQ 60
MADGG MEISLDKLPIKRLD IEESG+ERFPPEIEYEEK VNLIRR+DFAWALERD+KKQ
Sbjct: 1 MADGGDMEISLDKLPIKRLDIIEESGLERFPPEIEYEEKTVNLIRRIDFAWALERDSKKQ 60
Query: 61 KKAKEASAPSTWQGLVENLTLAHQELSVIIDLINTVEANDAVTVAHMNRPKPLPNEAMSD 120
KKAKEASAPSTWQG++ENL AHQELSVIIDLINTVEANDAVTVAHMNRPKPLPNE+++D
Sbjct: 61 KKAKEASAPSTWQGMIENLKSAHQELSVIIDLINTVEANDAVTVAHMNRPKPLPNESLND 120
Query: 121 LAVSAATKLQCYRHLSKYFKQSAKSLEHQIAREARFYGALIRLQQNWKVKWHRLAATAPG 180
LAVSAATKLQCYRHLSKYFKQSAKSLEHQI+REARFYGALIRLQQNWKVKWHRLAA AP
Sbjct: 121 LAVSAATKLQCYRHLSKYFKQSAKSLEHQISREARFYGALIRLQQNWKVKWHRLAANAPS 180
Query: 181 SDGFLIDLSNNAAHEQPAVPRAPTFSMVRVDHDSSGMLAVNLPKNSCRSFHFGFLDAQSG 240
SDGFLIDLSN AAHEQ AV RAP FSMVRVDHDSSGMLAVNL K+SCRSFHFGFLDA
Sbjct: 181 SDGFLIDLSNKAAHEQSAVARAPAFSMVRVDHDSSGMLAVNLSKSSCRSFHFGFLDAH-- 240
Query: 241 DSDSPEGCGRMNLDTG------DSPKESSDDDRIRETHTVLCNTHRAIFYEQVFELVSRE 300
DSPEG +MN+ T D SDDDR+RETHTVLC+ HRAIFYEQVFELVSRE
Sbjct: 241 PVDSPEGSEKMNVHTAEESLREDKKDPLSDDDRVRETHTVLCDAHRAIFYEQVFELVSRE 300
Query: 301 SFNPSLGVNVTGIRENYLELSIKPGVSVFILLRPYNQEDQGKNNSDTQNVDDLAKGSSLV 360
SFNPSLGVNVTGIRENYLELSIKPGVSVFI L PYNQEDQG ++SDTQ+VDDL+KGSS+V
Sbjct: 301 SFNPSLGVNVTGIRENYLELSIKPGVSVFISLMPYNQEDQGTDSSDTQDVDDLSKGSSMV 360
Query: 361 ESKQHIKLISGHPNPITYEIYLQQLFRNEIFSKVKHQPTLPGKVQSNQQTNDAAGLVNHF 420
SKQ++K +SGH NPITYEIYLQ+LF +EIF+KVKHQ LPGKVQS+Q NDAAGLVNHF
Sbjct: 361 VSKQNMKPLSGHSNPITYEIYLQKLFHDEIFTKVKHQSALPGKVQSSQPQNDAAGLVNHF 420
Query: 421 CLSLAHRTFSSKVLVELENLVTKIPYLRLISQPTWHSRSSSWALSVNVPK-ARSAESQAW 480
CLSLAHR FS+KVL ELENLVTKIPYL+LISQPTWHSR+SSWALSV VP+ +A+ QAW
Sbjct: 421 CLSLAHRDFSNKVLTELENLVTKIPYLQLISQPTWHSRTSSWALSVKVPEVVFNAQCQAW 480
Query: 481 RSNEDHTKENKLLFQTRVVVKDDCISIEGGGAPNV--LFKGKPEAMGSKNKFNCDIVDLP 540
RS+ED K+NKLLFQTRVVVKDDCI+IEGGGAPNV LFKG P+AMGSKN+FNCD+VDLP
Sbjct: 481 RSDEDQIKDNKLLFQTRVVVKDDCINIEGGGAPNVVGLFKGNPDAMGSKNRFNCDLVDLP 540
Query: 541 MVLLLQVASQIIYWLHEEALTVGIKTNQDFLCLSLELEQGETLSLVAHVDPEDELGCISW 600
MVLLLQ+ASQII WLHEEAL VGIKTN+DFLCLSLELEQGE LSLVAHVDPEDELGCISW
Sbjct: 541 MVLLLQIASQIISWLHEEALMVGIKTNRDFLCLSLELEQGEKLSLVAHVDPEDELGCISW 600
Query: 601 WLTVDDGSTEEHKLQADIPDGESPSRRFLGHLSLNALYSTLMDLVSLCNVSVSH 646
WL V+DGSTEEH LQAD+PDGESPSRRFLGHLSL+ALYSTLMDLVS+C SV+H
Sbjct: 601 WLMVEDGSTEEHTLQADLPDGESPSRRFLGHLSLDALYSTLMDLVSMCTGSVNH 652
BLAST of Spo08568.1 vs. UniProtKB/TrEMBL
Match:
A5BHH4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0016g05020 PE=4 SV=1)
HSP 1 Score: 754.2 bits (1946), Expect = 1.300e-214
Identity = 395/658 (60.03%), Postives = 489/658 (74.32%), Query Frame = 1
Query: 5 GAMEISLDKLPIKRLDAIEESGVERFPPEIEYEEKAVNLIRRVDFAWALERDAKKQKKA- 64
G MEISLDKLPIKRLDAIEE+G ERFP ++ Y++K V+LIRR+DFAWA+E+D KKQKKA
Sbjct: 3 GKMEISLDKLPIKRLDAIEENGAERFPTDVGYDDKRVSLIRRIDFAWAVEKDTKKQKKAS 62
Query: 65 KEASAPSTWQGLVENLTLAHQELSVIIDLINTVEANDAVTVAHMNRPKPLPNEAMSDLAV 124
KE + P WQ LVENL LAHQELSVIIDLI+TVEANDAVTVA M RPKPLPNE +SDL V
Sbjct: 63 KEEATPWPWQSLVENLRLAHQELSVIIDLISTVEANDAVTVASMTRPKPLPNEVLSDLGV 122
Query: 125 SAATKLQCYRHLSKYFKQSAKSLEHQIAREARFYGALIRLQQNWKVKWHRLAATAPGSDG 184
SAATKLQC+RHLSKYFKQSAK+LE QIAREARFYGALIRLQQNWKVK R+AA+APG++G
Sbjct: 123 SAATKLQCFRHLSKYFKQSAKALEQQIAREARFYGALIRLQQNWKVKRQRVAASAPGNEG 182
Query: 185 FLIDLSNNAAHEQPAVPRAPTFSMVRVDHDSSGMLAVNLPKNSCRSFHFGFLDAQSG--- 244
F IDL +N+ H+ AV R + S VRVDHDS+GMLAV+LP NSCR+ HFGFL G
Sbjct: 183 FSIDLFSNSLHDPVAVFRPSSLSTVRVDHDSAGMLAVHLPPNSCRALHFGFLGGHLGNIP 242
Query: 245 -DSDSPEGCGRMNLDTGDSPKESSDDDRIRETHTVLCNTHRAIFYEQVFELVSRESFNPS 304
+ + G L + + K SD++ ++ETH+VL H+AIF EQVF+LV+RE+FN S
Sbjct: 243 KEPSKTKTYGPDELPSKEIKKPLSDNECVKETHSVLREGHQAIFDEQVFDLVNREAFNSS 302
Query: 305 LGVNVTGIRENYLELSIKPGVSVFILLRPYNQEDQGKNNSDTQNVD------DLAKGSSL 364
GVNVTGIRENYL+L+I G SVF+ L P Q+++ + QN++ D G L
Sbjct: 303 SGVNVTGIRENYLQLNIGQGASVFMSLVPSGQDEKTADGMGMQNLESAILPMDTFDGVKL 362
Query: 365 VESK-QHIKLISGHPNPITYEIYLQQLFRNEIFSKVKHQPTLPGKVQ-SNQQTNDAAGLV 424
+ K + K SG PN I+ EIYL+QLF +F + K + G+ Q S+Q D GL+
Sbjct: 363 SDGKHDNDKKKSGFPNRISSEIYLKQLFHEHVFVRAKDKHISAGRTQPSSQPAKDGFGLL 422
Query: 425 NHFCLSLAHRTFSSKVLVELENLVTKIPYLRLISQPTWHSRSSSWALSVNVPKARSAESQ 484
HFC+SLAHR FSSKVL+ELENLV+++PYL L+S PTWHSR+SSW L + VP++
Sbjct: 423 GHFCMSLAHRIFSSKVLMELENLVSRVPYLHLLSHPTWHSRTSSWTLLMKVPESSFHPGC 482
Query: 485 AWRSNEDHTKEN--KLLFQTRVVVKDDCISIEGGGAPNV--LFKGKPEAMGSKNKFNCDI 544
R+++ H +N K F+T+VV+ DDCI++EG GAPNV LFKG E + S N+++CD+
Sbjct: 483 QTRTSDIHNVKNIIKTHFRTKVVINDDCINVEGDGAPNVVGLFKGSSEDVCSMNRYDCDL 542
Query: 545 VDLPMVLLLQVASQIIYWLHEEALTVGIKTNQDFLCLSLELEQGETLSLVAHVDPEDELG 604
D+P++LL QVASQ+I WLHEEAL VGIK N+DFLCLS E++QGE LSLVAHV+P+D G
Sbjct: 543 ADIPVILLQQVASQVIRWLHEEALKVGIKANRDFLCLSFEMDQGEMLSLVAHVNPDDPQG 602
Query: 605 CISWWLTVDDGSTEEHKLQADIPDGESPSRRFLGHLSLNALYSTLMDLVSLCNVSVSH 646
CISWWL +DDG +E+ K D PDG S R+FLGHLSL LYSTLMDLVSLCN H
Sbjct: 603 CISWWLVMDDGFSEDLKFHTDAPDGGSEYRKFLGHLSLEVLYSTLMDLVSLCNGGGRH 660
BLAST of Spo08568.1 vs. UniProtKB/TrEMBL
Match:
A0A067GXX0_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g006207mg PE=4 SV=1)
HSP 1 Score: 740.0 bits (1909), Expect = 2.500e-210
Identity = 390/657 (59.36%), Postives = 480/657 (73.06%), Query Frame = 1
Query: 5 GAMEISLDKLPIKRLDAIEESGVERFPPEIEYEEKAVNLIRRVDFAWALERDAKKQ--KK 64
G +EIS+DKLP+KRLDAIEE+G ERFPP++ Y+EK +LIRR+DFAWA+E+D K+ K
Sbjct: 3 GNLEISVDKLPVKRLDAIEETGAERFPPDVGYDEKRESLIRRIDFAWAVEKDDNKRLKKS 62
Query: 65 AKEASAPST-----WQGLVENLTLAHQELSVIIDLINTVEANDAVTVAHMNRPKPLPNEA 124
+KE+S+ +T WQ +VENL AHQELSVIIDLINTVEANDAVTVA M RPK LPNE
Sbjct: 63 SKESSSSATTTPWQWQNMVENLQFAHQELSVIIDLINTVEANDAVTVAGMTRPKALPNEV 122
Query: 125 MSDLAVSAATKLQCYRHLSKYFKQSAKSLEHQIAREARFYGALIRLQQNWKVKWHRLAAT 184
+SDL+VSAATKLQCYRHL YFKQSAKSLE QIA+EARFYGALIRLQQNWKVK R+AA
Sbjct: 123 LSDLSVSAATKLQCYRHLGIYFKQSAKSLEQQIAKEARFYGALIRLQQNWKVKRQRVAAP 182
Query: 185 APGSDGFLIDLSNNAAHEQPAVPRAPTFSMVRVDHDSSGMLAVNLPKNSCRSFHFGFLDA 244
A G++GF IDL +N+ ++ V R + S +R+DHDS+GMLA+NLP NSCRSF FGFL
Sbjct: 183 ASGNEGFTIDLFDNSLYDSAPVSRPSSLSTIRIDHDSAGMLAINLPPNSCRSFRFGFLGV 242
Query: 245 QSGDSDSPEGCGRMNLDTGDSP----KES-SDDDRIRETHTVLCNTHRAIFYEQVFELVS 304
QSGDS + C ++ P KES +DD+ +RE H++L H+AIFYEQVF++V+
Sbjct: 243 QSGDSS--KQCSKVKNSCSPRPSKEAKESVNDDECVREKHSLLREVHQAIFYEQVFDIVN 302
Query: 305 RESFNPSLGVNVTGIRENYLELSIKPGVSVFILLRPYNQEDQGKNNSDTQNVD------D 364
RE+F SLGVNVTGIRENYL+L I G+S+F+ L P NQ D ++ QNV+ D
Sbjct: 303 REAFKQSLGVNVTGIRENYLQLGIGLGISIFLSLIPSNQGDLSVDSWVNQNVESGILPLD 362
Query: 365 LAKGSSLVESKQHI-KLISGHPNPITYEIYLQQLFRNEIFSKVKHQPTLPGKVQSNQQTN 424
G L E K I + G+PNP+TYEIYLQQ+F ++ + K++P G S T
Sbjct: 363 SHDGVKLAEEKDDILRKSGGYPNPLTYEIYLQQVFHEYLYGRAKNKPISTGTRVSGPPTK 422
Query: 425 DAAGLVNHFCLSLAHRTFSSKVLVELENLVTKIPYLRLISQPTWHSRSSSWALSVNVPKA 484
D +GL+ HFCLSLAHR FS+KV VELEN V +PYL L+S PTWHSR+SSW + + VP++
Sbjct: 423 DGSGLLGHFCLSLAHRIFSNKVHVELENAVCGVPYLHLVSHPTWHSRTSSWTVFLKVPQS 482
Query: 485 -RSAESQAWRSNEDHTKENKLLFQTRVVVKDDCISIEGGGAPNV--LFKGKPEAMGSKNK 544
AE SN + K F+T VVV DDCI +EG G PNV LFKG+ E M S NK
Sbjct: 483 ILHAE-----SNSRTAETAKSHFRTNVVVNDDCIHVEGEGTPNVVGLFKGRSEDMSSMNK 542
Query: 545 FNCDIVDLPMVLLLQVASQIIYWLHEEALTVGIKTNQDFLCLSLELEQGETLSLVAHVDP 604
++CD+ DLP+++L QVASQ+I WLHEEAL VGIK N+DFL LS EL+QGET+SLVAHVDP
Sbjct: 543 YDCDLADLPVIILQQVASQVIRWLHEEALMVGIKANRDFLSLSFELDQGETVSLVAHVDP 602
Query: 605 EDELGCISWWLTVDDGSTEEHKLQADIPDGESPSRRFLGHLSLNALYSTLMDLVSLC 640
ED GCISWWL ++DG E KL DI D S ++FLGHLSL+ LYSTLMDLVSLC
Sbjct: 603 EDMRGCISWWLVMEDGFAAERKLSIDISDDASDYKKFLGHLSLDVLYSTLMDLVSLC 652
BLAST of Spo08568.1 vs. UniProtKB/TrEMBL
Match:
V4UJ16_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10007689mg PE=4 SV=1)
HSP 1 Score: 739.6 bits (1908), Expect = 3.300e-210
Identity = 389/657 (59.21%), Postives = 481/657 (73.21%), Query Frame = 1
Query: 5 GAMEISLDKLPIKRLDAIEESGVERFPPEIEYEEKAVNLIRRVDFAWALERDAKKQ--KK 64
G +EIS+DKLP+KRLDAIEE+G ERFPP++ Y+EK +LIRR+DFAWA+E+D K+ K+
Sbjct: 3 GNLEISVDKLPVKRLDAIEETGAERFPPDVGYDEKRESLIRRIDFAWAVEKDDNKRLKKR 62
Query: 65 AKEASAPST-----WQGLVENLTLAHQELSVIIDLINTVEANDAVTVAHMNRPKPLPNEA 124
+KE+S+ +T WQ +VENL AHQELSVIIDLINTVEANDAVTVA M RPK LPNE
Sbjct: 63 SKESSSSATTTPWQWQNMVENLQFAHQELSVIIDLINTVEANDAVTVAGMTRPKALPNEV 122
Query: 125 MSDLAVSAATKLQCYRHLSKYFKQSAKSLEHQIAREARFYGALIRLQQNWKVKWHRLAAT 184
+SDL+VSAATKLQCYRHL YFKQSAKSLE QIA+EARFYGALIRLQQNWKVK R+AA
Sbjct: 123 LSDLSVSAATKLQCYRHLGIYFKQSAKSLEQQIAKEARFYGALIRLQQNWKVKRQRVAAP 182
Query: 185 APGSDGFLIDLSNNAAHEQPAVPRAPTFSMVRVDHDSSGMLAVNLPKNSCRSFHFGFLDA 244
A G++GF IDL +N+ ++ V R + S +R+DHDS+GMLA+NLP NSCRSF FGFL
Sbjct: 183 ASGNEGFTIDLFDNSLYDSAPVSRPSSLSTIRIDHDSAGMLAINLPPNSCRSFRFGFLGV 242
Query: 245 QSGDSDSPEGCGRMNLDTGDSP----KES-SDDDRIRETHTVLCNTHRAIFYEQVFELVS 304
QSGDS + C ++ P KES +DD+ +RE H++L H+AIFYEQVF++V+
Sbjct: 243 QSGDSS--KQCSKVKNSCSPRPSKEAKESVNDDECVREKHSLLREVHQAIFYEQVFDIVN 302
Query: 305 RESFNPSLGVNVTGIRENYLELSIKPGVSVFILLRPYNQEDQGKNNSDTQNVD------D 364
RE+F SLGVNVTGIRENYL+L I G+S+F+ L P NQ D ++ QNV+ D
Sbjct: 303 REAFKQSLGVNVTGIRENYLQLGIGLGISIFLSLIPSNQGDLSVDSWVNQNVESGILPLD 362
Query: 365 LAKGSSLVESKQHI-KLISGHPNPITYEIYLQQLFRNEIFSKVKHQPTLPGKVQSNQQTN 424
G L E K I + G+PNP+TYEIYLQQ+F ++ + K++P G S T
Sbjct: 363 SHDGVKLAEEKDDILRKSGGYPNPLTYEIYLQQVFHEYLYGRAKNKPISTGTRVSGPPTK 422
Query: 425 DAAGLVNHFCLSLAHRTFSSKVLVELENLVTKIPYLRLISQPTWHSRSSSWALSVNVPKA 484
D +GL+ HFCLSLAHR FS+KV VELEN V +PYL L+S PTWHSR+SSW + + VP++
Sbjct: 423 DGSGLLGHFCLSLAHRIFSNKVRVELENAVCGVPYLHLVSHPTWHSRTSSWTVFLKVPQS 482
Query: 485 -RSAESQAWRSNEDHTKENKLLFQTRVVVKDDCISIEGGGAPNV--LFKGKPEAMGSKNK 544
AE SN + K F+T VVV DDCI +EG G PNV LF+G+ E M S NK
Sbjct: 483 ILHAE-----SNSRTAETAKSHFRTNVVVNDDCIHVEGEGTPNVVGLFEGRSEDMSSMNK 542
Query: 545 FNCDIVDLPMVLLLQVASQIIYWLHEEALTVGIKTNQDFLCLSLELEQGETLSLVAHVDP 604
++CD+ DLP+++L QVASQ+I WLHEEAL VGIK N+DFL LS EL+QGET+SLVAHVDP
Sbjct: 543 YDCDLADLPVIILQQVASQVIRWLHEEALMVGIKANRDFLSLSFELDQGETVSLVAHVDP 602
Query: 605 EDELGCISWWLTVDDGSTEEHKLQADIPDGESPSRRFLGHLSLNALYSTLMDLVSLC 640
ED GCISWWL ++DG E KL DI D S ++FLGHLSL+ LYSTLMDLVSLC
Sbjct: 603 EDMRGCISWWLVMEDGFAAERKLSIDISDDASDYKKFLGHLSLDVLYSTLMDLVSLC 652
BLAST of Spo08568.1 vs. ExPASy Swiss-Prot
Match:
MED17_ARATH (Mediator of RNA polymerase II transcription subunit 17 OS=Arabidopsis thaliana GN=MED17 PE=1 SV=1)
HSP 1 Score: 619.4 bits (1596), Expect = 4.500e-176
Identity = 336/652 (51.53%), Postives = 457/652 (70.09%), Query Frame = 1
Query: 7 MEISLDKLPIKRLDAIEESGVERFPPEIEYEEKAVNLIRRVDFAWALER-DAKKQKKAKE 66
MEISLD+LPIKRL++IEE+G ERFP +++Y++K V+LIRR+DFAWALE D K+KK K+
Sbjct: 5 MEISLDRLPIKRLESIEENGAERFPSDVDYDDKRVSLIRRIDFAWALEEEDELKKKKQKK 64
Query: 67 ASAPST----WQGLVENLTLAHQELSVIIDLINTVEANDAVTVAHMNRPKPLPNEAMSDL 126
+S S W+G+VENL LAHQEL+VIIDLI+TV+ANDAVTVA M RPKP+PNE +SDL
Sbjct: 65 SSKDSVEQWKWKGMVENLQLAHQELTVIIDLIDTVQANDAVTVAGMTRPKPMPNEILSDL 124
Query: 127 AVSAATKLQCYRHLSKYFKQSAKSLEHQIAREARFYGALIRLQQNWKVKWHRLAATAPGS 186
AVS ATKLQ YR+L YFKQSAK+LE +I REARFYGALIRLQ+NWKVK R+ A+ +
Sbjct: 125 AVSTATKLQGYRNLGNYFKQSAKALEQKINREARFYGALIRLQRNWKVKRQRMLASNASN 184
Query: 187 DGFLIDLSNNAAHEQPAVPRAPTFSMVRVDHDSSGMLAVNLPKNSCRSFHFGFLD----A 246
+GF IDLS+++ ++ + R T S +RVDHDS+GMLA+N+P++S S FG++
Sbjct: 185 EGFTIDLSDSSLYDPTSGFRPSTLSTIRVDHDSAGMLAINVPQDSWYSLRFGYVGLNPIG 244
Query: 247 QSGDSDSPEGCGRMNLDTGDSPKESSDDDR-IRETHTVLCNTHRAIFYEQVFELVSRESF 306
S +SD + G S K S+ DD+ ++ETH++L H++IF EQ+F++++RE+F
Sbjct: 245 NSNESDEHIDSTTGHDIPGTSEKLSASDDKYVKETHSLLREVHKSIFAEQLFDMLNREAF 304
Query: 307 NPSLGVNVTGIRENYLELSIKPGVSVFILLRPYNQEDQGKNNS--DTQNVDDLAKGSSLV 366
N +G N++G+REN++E+SI G S+F+ L P GKN S +++ L + S V
Sbjct: 305 NEGVGFNISGLRENFMEMSIGQGASLFVSLHP-----SGKNPSIKKSESATLLIESSGRV 364
Query: 367 ESKQ----HIKLISGHPNPITYEIYLQQLFRNEIFSKVKHQPTLPGKVQSNQQTNDA-AG 426
E + +K + G PN +YEIYLQQ+F F K K Q SNQ D+ +G
Sbjct: 365 EPAEGGDYRLKKL-GFPNRTSYEIYLQQIFHEHAFGKAKDQLKSKSIRASNQTEKDSNSG 424
Query: 427 LVNHFCLSLAHRTFSSKVLVELENLVTKIPYLRLISQPTWHSRSSSWALSVNVPKARSAE 486
L++HFCLSL HR FS++VLV LE++V K+PYL LIS PTW+SR+SSW + + VP + +
Sbjct: 425 LLDHFCLSLTHRIFSNRVLVHLESVVCKVPYLHLISHPTWNSRTSSWTVFMTVPPSIIPQ 484
Query: 487 SQAWRSNEDHTKENKLLFQTRVVVKDDCISIEGGGAPNV--LFKGKPEAMGSKNKFNCDI 546
++ + D + K F+T+VVVKDDCIS+E PNV L K + S NK+ CD+
Sbjct: 485 GRSETQSPDGKRNLKTQFRTKVVVKDDCISVEAECTPNVVGLLKSSSCNLFSINKYECDV 544
Query: 547 VDLPMVLLLQVASQIIYWLHEEALTVGIKTNQDFLCLSLELEQGETLSLVAHVDPEDELG 606
DLP+++L QVASQI+ WL EEA TVG K +++FL LSLE+ +GE +SLVAHV+PED G
Sbjct: 545 ADLPVMILQQVASQIVCWLLEEARTVGTKASREFLSLSLEIVEGERVSLVAHVNPEDAKG 604
Query: 607 CISWWLTVDDGSTEEHKLQADIPDGESPSRRFLGHLSLNALYSTLMDLVSLC 640
CISWWL +++G TEE +G S SR+ LGHLSL+ LYS LMDL++LC
Sbjct: 605 CISWWLVMENGCTEER-------EGVSESRKLLGHLSLDVLYSVLMDLINLC 643
BLAST of Spo08568.1 vs. TAIR (Arabidopsis)
Match:
AT5G20170.1 (RNA polymerase II transcription mediators)
HSP 1 Score: 619.4 bits (1596), Expect = 2.500e-177
Identity = 336/652 (51.53%), Postives = 457/652 (70.09%), Query Frame = 1
Query: 7 MEISLDKLPIKRLDAIEESGVERFPPEIEYEEKAVNLIRRVDFAWALER-DAKKQKKAKE 66
MEISLD+LPIKRL++IEE+G ERFP +++Y++K V+LIRR+DFAWALE D K+KK K+
Sbjct: 5 MEISLDRLPIKRLESIEENGAERFPSDVDYDDKRVSLIRRIDFAWALEEEDELKKKKQKK 64
Query: 67 ASAPST----WQGLVENLTLAHQELSVIIDLINTVEANDAVTVAHMNRPKPLPNEAMSDL 126
+S S W+G+VENL LAHQEL+VIIDLI+TV+ANDAVTVA M RPKP+PNE +SDL
Sbjct: 65 SSKDSVEQWKWKGMVENLQLAHQELTVIIDLIDTVQANDAVTVAGMTRPKPMPNEILSDL 124
Query: 127 AVSAATKLQCYRHLSKYFKQSAKSLEHQIAREARFYGALIRLQQNWKVKWHRLAATAPGS 186
AVS ATKLQ YR+L YFKQSAK+LE +I REARFYGALIRLQ+NWKVK R+ A+ +
Sbjct: 125 AVSTATKLQGYRNLGNYFKQSAKALEQKINREARFYGALIRLQRNWKVKRQRMLASNASN 184
Query: 187 DGFLIDLSNNAAHEQPAVPRAPTFSMVRVDHDSSGMLAVNLPKNSCRSFHFGFLD----A 246
+GF IDLS+++ ++ + R T S +RVDHDS+GMLA+N+P++S S FG++
Sbjct: 185 EGFTIDLSDSSLYDPTSGFRPSTLSTIRVDHDSAGMLAINVPQDSWYSLRFGYVGLNPIG 244
Query: 247 QSGDSDSPEGCGRMNLDTGDSPKESSDDDR-IRETHTVLCNTHRAIFYEQVFELVSRESF 306
S +SD + G S K S+ DD+ ++ETH++L H++IF EQ+F++++RE+F
Sbjct: 245 NSNESDEHIDSTTGHDIPGTSEKLSASDDKYVKETHSLLREVHKSIFAEQLFDMLNREAF 304
Query: 307 NPSLGVNVTGIRENYLELSIKPGVSVFILLRPYNQEDQGKNNS--DTQNVDDLAKGSSLV 366
N +G N++G+REN++E+SI G S+F+ L P GKN S +++ L + S V
Sbjct: 305 NEGVGFNISGLRENFMEMSIGQGASLFVSLHP-----SGKNPSIKKSESATLLIESSGRV 364
Query: 367 ESKQ----HIKLISGHPNPITYEIYLQQLFRNEIFSKVKHQPTLPGKVQSNQQTNDA-AG 426
E + +K + G PN +YEIYLQQ+F F K K Q SNQ D+ +G
Sbjct: 365 EPAEGGDYRLKKL-GFPNRTSYEIYLQQIFHEHAFGKAKDQLKSKSIRASNQTEKDSNSG 424
Query: 427 LVNHFCLSLAHRTFSSKVLVELENLVTKIPYLRLISQPTWHSRSSSWALSVNVPKARSAE 486
L++HFCLSL HR FS++VLV LE++V K+PYL LIS PTW+SR+SSW + + VP + +
Sbjct: 425 LLDHFCLSLTHRIFSNRVLVHLESVVCKVPYLHLISHPTWNSRTSSWTVFMTVPPSIIPQ 484
Query: 487 SQAWRSNEDHTKENKLLFQTRVVVKDDCISIEGGGAPNV--LFKGKPEAMGSKNKFNCDI 546
++ + D + K F+T+VVVKDDCIS+E PNV L K + S NK+ CD+
Sbjct: 485 GRSETQSPDGKRNLKTQFRTKVVVKDDCISVEAECTPNVVGLLKSSSCNLFSINKYECDV 544
Query: 547 VDLPMVLLLQVASQIIYWLHEEALTVGIKTNQDFLCLSLELEQGETLSLVAHVDPEDELG 606
DLP+++L QVASQI+ WL EEA TVG K +++FL LSLE+ +GE +SLVAHV+PED G
Sbjct: 545 ADLPVMILQQVASQIVCWLLEEARTVGTKASREFLSLSLEIVEGERVSLVAHVNPEDAKG 604
Query: 607 CISWWLTVDDGSTEEHKLQADIPDGESPSRRFLGHLSLNALYSTLMDLVSLC 640
CISWWL +++G TEE +G S SR+ LGHLSL+ LYS LMDL++LC
Sbjct: 605 CISWWLVMENGCTEER-------EGVSESRKLLGHLSLDVLYSVLMDLINLC 643
The following BLAST results are available for this feature: