Spo08545 (gene)

Overview
NameSpo08545
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
LocationSuper_scaffold_51 : 175363 .. 178515 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TACTAGGCTGCTGGAGACTTTTATTTGCACGACCATATCAAAGTAAATTTCTTTAACCGCGAATCGTCGTAGAAAACACGATAAACCAAGAAGAGAAGGGAGAGAAACTTGGAACCCCAGTTGCAGACTTGTGAGTTACTACGTACGAAGCAGAGACTTACAAACTTTAAGAGGAGAAAGAATGATGCGAGGAACTGGATCCGCCGGGTCGAAGCGGCAACAACCGTCGTGGACCACCACCATTTACCTACGCTTTCGTGCTGCCGAATTCGAGATTCTTTTCTTCCTCTTCTTTCTCGTTGCTTTTCTCTTCCTCAAAGATCTCGTAAGCAAACAACCTCCTCCACTTCCCCTCTTTTATTTTATTTAATCTTTTCTTAGATTATTATTTGTTTTCAGTTGCTAATTGTTGATTCTATGTTCAATTTCTGTTCGCTGATTATGAATTCTGATTGATTTTGTTTGACCTGTAATATCGTGGGGGAATTGCTGTAGGACTTTAGAATTGTCTACAGATGAACTAAAAATTGGGGATAATTTTGTGTTTTTCGTGTCGGAATTGCGGATTGATTTTTCATTATTGATAGAAAAAACCATTTTAACACTTCCTAATTTTGATTGATTTACTCCTGAATTAGAAAATTGGCAGTTCGCTCTCATTTATCTTAATGTTGAATTACCCCTGATTGCTCTTGAAATTGTGAATTCATCCATGAAAGTTGAATCACCACCTATTGCTCTTGGAATTGTGAATTTGGCAATGAATGTTGAAATACCACTGCGTGCTTATGAAACAGTGAATTCGGAAGTGTTTGTTTAGATTACAATTGATTGCTTGTGTGATTATGATTTGTGTATGCATCGGTGACTGTTGAATTACCATCGCTTGCTTGTGAGATCATGAATTTAGCAACGGATGTTGATCTACTACCTCCTTTATCACTGAGCGGTCATTTATTGTGATTTCATCAGTTGATCCCTAGTTAAATCATGAATTCATCAGTGTATGTTTGAAACCCGGATTGCTCATCAGTGGATGGGTGATTGGATTATGTTACGTATGCCAATAATCTCTCTTTGAGGAAAGGCTGTTGAAATGCTTAGCTCAGGTCTAAACATATTGCGCAAACAGGTTTTACAGGATCAATTAAAGGAGTCCGAGTAACACAATCTCTTAGGTAAGTAATAATTGGGTTTAGTTGATATTATCTTTGGAAAAGCATCTACTGTAATACAGCATTAGTAGCACGGGGGGTCAGTGAAATAATGGAAAATCGTTAATTGTGAGGATCGGGACGATGTGACTATTAGTTCCGACAGAGGAGTTAGCTGCTTGACAAAACTGATGTTTAAGAAAGAGCTGCAATAGAATATAGATTCTTTACTTGTTTCTTTAAGTACTCTAAGCATTATTGTAAAAAAATCTGTAACAATGCTTCTATGTCCTTCATTGAGTAAAGTATTCTCCTTTGACCAGTTTTCAGATGAAATGTACTACATTCAAGTGACTTTTTGATCTATGCAGACAGTAAGTAAAGTTTAAAAAAAAATATTGATGTTACCTTATTTAGATTATTACTTTAAAAAAAACCTTTTTGGATGACCTTGCTGTACTGGAAGGAACCCATCATCCTTCATTTTCTGAACTAGTTTGCAGATGAAATATACCACAGTCAAGTGGCTTCTTGACTTATGCAGACAGTAAGTCAAGCGAAATGTTAATGATGTCATTTTAGTGACTTTTTGACCTAGCATCCACCATCCTTAAATATTTATCATGCATTCATGCATTACCAACTTAGCTTGTAAAAATGGGTTTTTTTTGTTGGGAGTGGGGTACCAAATTTCCATGTTATAAGTGGGATAGCAATGAATGAACATGCCATTGATTTCTGTACTAGTCACGAGCCTCACAAACAGCTATAAATGCCTTGGAATTGACAGACTGATCAATTTCTATTTTCTAGCTAGTGGTTTGTGTTACTTTACTGGACTGACCGACCTACTTTGTTCCTCGATAATGAATGTTGTATAACAGAAATTCTTAAATGTTAGATTTTTGTGCAAGCTAAAACCAGACATAAGGAAATAGCATATGTGGTTCCGTCCTTGTTTACATCCTCAAAGTCGTTTGTGTTATAGTTTTCTTTTCTTGTAATTGAGCTGCCTGAGCTGGTTTGTGCTTCTTGAATGATTAGATATCAGCATGCATCTGTATGTTTTCCTCCAGGATAATGTGTATTGGCGTTCATGGTGATTTGGTTATCATACATGATACATGTGAATCGCCCTCAGTTGTCATGGGAATCATTGTTTAACATTTGATATTTTACTAGGGAGGCCATCTGATGGGTAAAACGAAGTCATACTTGGTATTAAGTTAGAACTTAGAAGTACTTGTATTACTCTAGGCTGAAACCTCCATCTTCAAATAAATTACACTTGACTTTTGGGAGACACTCCTGTTTGAGTTTTGACCATAAACTTGTCAAAATACCACGCTGATACCTTCAAGGGTGTTATGTAAGCTTGCCAATTGTTAGCTTTTATTATGATATAATGACAAGACATTAATTATCAACGTTGGACCACAAATGTTAAATGTTATCTAGTACGAGTATTCATGAACTGGTATATTGTTGTTAACCAAGGAGGGGCTTTTCTGAAGGAGGTTTATTATCGAAGTTGGTGTTTTTGGTCATCACCTTAATAATTTGATAGATTATGGACTTTATGGTAGATGCTCGGTGACATTGGTGTTTCGCAAGTTTATTATCGGTGTTTATATGTCTTATGGTGTTTTTTGTCTATTGCAGATATCAAGACCCGAGTATAATCAGATTCTGGTGAAGAAGCCTCAACATGACTTCTGGCCGTTTTAGGAGATAACTGACTATGATGTCGTAAATTTTGTTTGATATTTTTTCATTTTGTACAATACTTTCATCTTAATTGAAGCTGATCAAGAATGTAAATCTATGTATGGAAAGAGACTTTCTGAGGATGATTGTCTGATATAGAGTATCTTGTTTGCTGTCCGAATTGTCCGATGATAACAATCATCTTAATTTTCTAATTTTTAATTAGACCTGCTTAACTAGTTATGTTATTTGGGCCAAAATGAAGATATGTTGGTTACTTCTGAACCCAAAC

mRNA sequence

TACTAGGCTGCTGGAGACTTTTATTTGCACGACCATATCAAAGTAAATTTCTTTAACCGCGAATCGTCGTAGAAAACACGATAAACCAAGAAGAGAAGGGAGAGAAACTTGGAACCCCAGTTGCAGACTTGTGAGTTACTACGTACGAAGCAGAGACTTACAAACTTTAAGAGGAGAAAGAATGATGCGAGGAACTGGATCCGCCGGGTCGAAGCGGCAACAACCGTCGTGGACCACCACCATTTACCTACGCTTTCGTGCTGCCGAATTCGAGATTCTTTTCTTCCTCTTCTTTCTCGTTGCTTTTCTCTTCCTCAAAGATCTCATATCAAGACCCGAGTATAATCAGATTCTGGTGAAGAAGCCTCAACATGACTTCTGGCCGTTTTAGGAGATAACTGACTATGATGTCGTAAATTTTGTTTGATATTTTTTCATTTTGTACAATACTTTCATCTTAATTGAAGCTGATCAAGAATGTAAATCTATGTATGGAAAGAGACTTTCTGAGGATGATTGTCTGATATAGAGTATCTTGTTTGCTGTCCGAATTGTCCGATGATAACAATCATCTTAATTTTCTAATTTTTAATTAGACCTGCTTAACTAGTTATGTTATTTGGGCCAAAATGAAGATATGTTGGTTACTTCTGAACCCAAAC

Coding sequence (CDS)

ATGATGCGAGGAACTGGATCCGCCGGGTCGAAGCGGCAACAACCGTCGTGGACCACCACCATTTACCTACGCTTTCGTGCTGCCGAATTCGAGATTCTTTTCTTCCTCTTCTTTCTCGTTGCTTTTCTCTTCCTCAAAGATCTCATATCAAGACCCGAGTATAATCAGATTCTGGTGAAGAAGCCTCAACATGACTTCTGGCCGTTTTAG

Protein sequence

MMRGTGSAGSKRQQPSWTTTIYLRFRAAEFEILFFLFFLVAFLFLKDLISRPEYNQILVKKPQHDFWPF
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo08545.1Spo08545.1mRNA


Homology
[Close]
BLAST of Spo08545.1 vs. NCBI nr
Match: gi|902173371|gb|KNA08256.1| (hypothetical protein SOVF_164120 [Spinacia oleracea])

HSP 1 Score: 141.7 bits (356), Expect = 4.700e-31
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 1 

		  

Query: 1  MMRGTGSAGSKRQQPSWTTTIYLRFRAAEFEILFFLFFLVAFLFLKDLISRPEYNQILVK 60
          MMRGTGSAGSKRQQPSWTTTIYLRFRAAEFEILFFLFFLVAFLFLKDLISRPEYNQILVK
Sbjct: 1  MMRGTGSAGSKRQQPSWTTTIYLRFRAAEFEILFFLFFLVAFLFLKDLISRPEYNQILVK 60

Query: 61 KPQHDFWPF 70
          KPQHDFWPF
Sbjct: 61 KPQHDFWPF 69
[Close]
BLAST of Spo08545.1 vs. NCBI nr
Match: gi|870862116|gb|KMT13351.1| (hypothetical protein BVRB_4g084420 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 92.8 bits (229), Expect = 2.500e-16
Identity = 45/58 (77.59%), Postives = 49/58 (84.48%), Query Frame = 1 

		  

Query: 9  GSKRQQPSWTTTIYLRFRAAEFEILFFLFFLVAFLFLKDLISRPEYNQILVKKPQHDF 67
          GSKRQQPS  TTIYL  RAAEFEI FFLFF +AF F ++L +RPEYNQILVKKPQHDF
Sbjct: 5  GSKRQQPSLVTTIYLYLRAAEFEIFFFLFFFIAFFFFRNLTARPEYNQILVKKPQHDF 62
[Close]
BLAST of Spo08545.1 vs. NCBI nr
Match: gi|703116123|ref|XP_010101060.1| (hypothetical protein L484_007794 [Morus notabilis])

HSP 1 Score: 71.2 bits (173), Expect = 7.700e-10
Identity = 42/75 (56.00%), Postives = 48/75 (64.00%), Query Frame = 1 

		  

Query: 2  MRGTGSAGSK----RQQPSWTTTIYLRFR---AAEFEILFFLFFLVAFLFLKDLISRPEY 61
          M G G A S+    R + + T  +   FR    AEFEILF LFFL+AFL  KDL SRPEY
Sbjct: 1  MAGAGRAESRNRRERDESAVTRAVNSVFRFVRLAEFEILFVLFFLIAFLIFKDLTSRPEY 60

Query: 62 NQILVKKPQHDFWPF 70
          NQILVKKP   FWP+
Sbjct: 61 NQILVKKPGASFWPY 75
[Close]
BLAST of Spo08545.1 vs. NCBI nr
Match: gi|720093141|ref|XP_010245964.1| (PREDICTED: uncharacterized protein LOC104589364 [Nelumbo nucifera])

HSP 1 Score: 70.1 bits (170), Expect = 1.700e-9
Identity = 39/72 (54.17%), Postives = 48/72 (66.67%), Query Frame = 1 

		  

Query: 2  MRGTGSAGSKRQQPSWTTTIYLRF---RAAEFEILFFLFFLVAFLFLKDLISRPEYNQIL 61
          MRG   A   R + ++T  +   F   R AEFEILFFLF ++ F+  KDL SRPEYNQIL
Sbjct: 1  MRGRIDARPNRNESAFTRAVNAVFAFVRLAEFEILFFLFLVITFIVFKDLTSRPEYNQIL 60

Query: 62 VKKP-QHDFWPF 70
          VKKP  +DFWP+
Sbjct: 61 VKKPGGNDFWPY 72
[Close]
BLAST of Spo08545.1 vs. NCBI nr
Match: gi|590590407|ref|XP_007016725.1| (GRIP and coiled-coil domain-containing protein 1 [Theobroma cacao])

HSP 1 Score: 70.1 bits (170), Expect = 1.700e-9
Identity = 37/59 (62.71%), Postives = 43/59 (72.88%), Query Frame = 1 

		  

Query: 17 WTTT-----IYLRFRAAEFEILFFLFFLVAFLFLKDLISRPEYNQILVKKPQH-DFWPF 70
          WT T     ++  FR AEFEILFFLFF++AFL  KDL SRPEYNQ+LVKKP   D WP+
Sbjct: 18 WTLTAAVNSVFEFFRLAEFEILFFLFFIIAFLIFKDLTSRPEYNQLLVKKPGGVDLWPY 76
[Close]
BLAST of Spo08545.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QNV2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_164120 PE=4 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 3.300e-31
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 1 

		  

Query: 1  MMRGTGSAGSKRQQPSWTTTIYLRFRAAEFEILFFLFFLVAFLFLKDLISRPEYNQILVK 60
          MMRGTGSAGSKRQQPSWTTTIYLRFRAAEFEILFFLFFLVAFLFLKDLISRPEYNQILVK
Sbjct: 1  MMRGTGSAGSKRQQPSWTTTIYLRFRAAEFEILFFLFFLVAFLFLKDLISRPEYNQILVK 60

Query: 61 KPQHDFWPF 70
          KPQHDFWPF
Sbjct: 61 KPQHDFWPF 69
[Close]
BLAST of Spo08545.1 vs. UniProtKB/TrEMBL
Match: A0A0J8FBY6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g084420 PE=4 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 1.700e-16
Identity = 45/58 (77.59%), Postives = 49/58 (84.48%), Query Frame = 1 

		  

Query: 9  GSKRQQPSWTTTIYLRFRAAEFEILFFLFFLVAFLFLKDLISRPEYNQILVKKPQHDF 67
          GSKRQQPS  TTIYL  RAAEFEI FFLFF +AF F ++L +RPEYNQILVKKPQHDF
Sbjct: 5  GSKRQQPSLVTTIYLYLRAAEFEIFFFLFFFIAFFFFRNLTARPEYNQILVKKPQHDF 62
[Close]
BLAST of Spo08545.1 vs. UniProtKB/TrEMBL
Match: W9S3E9_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_007794 PE=4 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 5.400e-10
Identity = 42/75 (56.00%), Postives = 48/75 (64.00%), Query Frame = 1 

		  

Query: 2  MRGTGSAGSK----RQQPSWTTTIYLRFR---AAEFEILFFLFFLVAFLFLKDLISRPEY 61
          M G G A S+    R + + T  +   FR    AEFEILF LFFL+AFL  KDL SRPEY
Sbjct: 1  MAGAGRAESRNRRERDESAVTRAVNSVFRFVRLAEFEILFVLFFLIAFLIFKDLTSRPEY 60

Query: 62 NQILVKKPQHDFWPF 70
          NQILVKKP   FWP+
Sbjct: 61 NQILVKKPGASFWPY 75
[Close]
BLAST of Spo08545.1 vs. UniProtKB/TrEMBL
Match: A0A061H085_THECC (GRIP and coiled-coil domain-containing protein 1 OS=Theobroma cacao GN=TCM_042045 PE=4 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 1.200e-9
Identity = 37/59 (62.71%), Postives = 43/59 (72.88%), Query Frame = 1 

		  

Query: 17 WTTT-----IYLRFRAAEFEILFFLFFLVAFLFLKDLISRPEYNQILVKKPQH-DFWPF 70
          WT T     ++  FR AEFEILFFLFF++AFL  KDL SRPEYNQ+LVKKP   D WP+
Sbjct: 18 WTLTAAVNSVFEFFRLAEFEILFFLFFIIAFLIFKDLTSRPEYNQLLVKKPGGVDLWPY 76
[Close]
BLAST of Spo08545.1 vs. UniProtKB/TrEMBL
Match: A0A059AKQ0_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I00239 PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 2.100e-9
Identity = 37/61 (60.66%), Postives = 45/61 (73.77%), Query Frame = 1 

		  

Query: 13  QQPSWT---TTIYLRFRAAEFEILFFLFFLVAFLFLKDLISRPEYNQILVKKPQH-DFWP 70
           ++P +T   T+++   R AEFEILFFLFF +AFL  KDL SRPEYNQILVKKP   D WP
Sbjct: 70  KEPMFTRMVTSVFRFARVAEFEILFFLFFFIAFLIFKDLTSRPEYNQILVKKPGGIDLWP 129
[Close]
BLAST of Spo08545.1 vs. TAIR (Arabidopsis)
Match: AT3G14430.1 (unknown protein)

HSP 1 Score: 63.5 bits (153), Expect = 5.700e-11
Identity = 35/70 (50.00%), Postives = 44/70 (62.86%), Query Frame = 1 

		  

Query: 4  GTGSAGSKRQQPSWTT---TIYLRFRAAEFEILFFLFFLVAFLFLKDLISRPEYNQILVK 63
          GT   G +R     T    +++  FR AEFEILF LF L+ ++  KDL SRPEYN+ILV+
Sbjct: 7  GTNRVGMRRDDSLLTRFVDSVFYFFRLAEFEILFVLFMLITYVIFKDLTSRPEYNRILVE 66

Query: 64 KP-QHDFWPF 70
          KP   D WPF
Sbjct: 67 KPGGSDIWPF 76
The following BLAST results are available for this feature:
BLAST of Spo08545.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902173371|gb|KNA08256.1|4.7e-31100.hypothetical protein SOVF_1641... [more]
gi|870862116|gb|KMT13351.1|2.5e-1677.5hypothetical protein BVRB_4g08... [more]
gi|703116123|ref|XP_010101060.1|7.7e-1056.0hypothetical protein L484_0077... [more]
gi|720093141|ref|XP_010245964.1|1.7e-954.1PREDICTED: uncharacterized pro... [more]
gi|590590407|ref|XP_007016725.1|1.7e-962.7GRIP and coiled-coil domain-co... [more]
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BLAST of Spo08545.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QNV2_SPIOL3.3e-31100.Uncharacterized protein OS=Spi... [more]
A0A0J8FBY6_BETVU1.7e-1677.5Uncharacterized protein OS=Bet... [more]
W9S3E9_9ROSA5.4e-1056.0Uncharacterized protein OS=Mor... [more]
A0A061H085_THECC1.2e-962.7GRIP and coiled-coil domain-co... [more]
A0A059AKQ0_EUCGR2.1e-960.6Uncharacterized protein OS=Euc... [more]
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BLAST of Spo08545.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo08545.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1
Match NameE-valueIdentityDescription
AT3G14430.15.7e-1150.0unknown protein[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR37223FAMILY NOT NAMEDcoord: 25..69
score: 8.2

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009814 defense response, incompatible interaction
biological_process GO:0010227 floral organ abscission
biological_process GO:0010229 inflorescence development
biological_process GO:0009626 plant-type hypersensitive response
biological_process GO:0015824 proline transport
biological_process GO:0006468 protein phosphorylation
biological_process GO:2000037 regulation of stomatal complex patterning
biological_process GO:0009069 serine family amino acid metabolic process
molecular_function GO:0005524 ATP binding
molecular_function GO:0005515 protein binding
molecular_function GO:0004674 protein serine/threonine kinase activity
RNA-Seq Expression