Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTCAGAACTCAGAACCATCCACGAGAAGAAAACTCCATTCTTTTCTATGGTCAACTGAAAACTGAAGCTTCTTTCGTTTGCATATCTTTCAACTAAATCGTAAACCCTAACCCACATTTCTTTTCATTTTACTCAGAAAATCATTCAGTTATGGCATTTATAGCAACAATTCGATTATCCCCTGTAAAATTCCCAACTCAATTTCAACTACTTTCACTCGAATCGCCTCAACCCACTCTATCCACAAAATCCATAAAATTTAAGCAGCTCAGAGTCAATGCTTCAGCCTCGATTGGTTCTTCCAATGTCCCTGTTGCTGATAAACTCTCCACTCTAAAAAAGGTGATTCTTTTTTTGGGAATTTGTTTGTTTTTTCATTATTCTTTGTAAAATTATGCTAAATTTGTTTGGGAATATTTCTGTCATGCTCATTTTAATCATTAGTTCTGTCAATTTTTTTTATTTTATCTTTGTGTATAATTCTGGGGTTGTCTCATTAGTTTTATGCTGTATTAATTTTCAGAATGATTATTGGCAATGGAAGTTCAGTGACAAATCAATCAAAATTTATTATGAGGAACATGAAAAAGAGGGTTCTGAGCCTAGTAAAAATATGCTAATGATACCCACAATTTCTGATGTTAGCACAATGGAAGAATGGAATTTGGTGGTTTCGGAAATTTTGCAACAGGATGGTAGTGAAAATTTGAGGGCTACACTTGTTGATTGGCCTGGTCTAGGCAACTCAGACCGGCCCAAGTTGGATTATACTGCAGATGTCATGGAGAAGTTCCTATCAGACCTGATTAATTCTCCTGGGAGTCCTGTGTGTAGATCAGGTGTGCTCAATTGGCTATATTTTTGCTGTGATGATTGCAGTCTTGTAGATATTGATCGATGTTGAACTAATGATGTGTATGATTTCATTTACTCCTGGTCAAAAAAGAATATGTGTGTGGTTCTTTGCAAGTGTGATGAGATTTCCTGCATAATTTTGTTTTGTGTGTGTGAATAACTGAATACTCAATACTTATTTGTTATGTTATATGCATTGAGCTAAAGGCTGGTTGATGGAATTAGATGCTTAAGATTTCCAGATCATTGGGCTGTACTAGCTACCTCTTAGAAAATAGTGTGCTTGTAGCCTAGTTTGAAGTATCTGAGTGTCTTCCACTCTTCCCCTTTTCGGAGTGTTTAGAAACGCAAGTACTTAGGTGGGTGAAAACTGATGATTTTTATAATCATTCAGTTTTGCTGAAGTTTATTTTGTTACTGTTTTATGCCTTGACTTCAGGATGATGATGCCTTTTTATTTCAGCAGTTACTTCCTGAATTTTGTCTGCTGTTAATAGTAACATGATTGAAATTGAGCAAATTATTAGTTTTCTGGCTTCAGGAGTACTTTATGCTAACGATTGAAATATTCCTGTTTCATAGTTGTAACATACTCAGCGGTTGTTTGGCTTACACAGAGAAAGGGACATGAATTTAGGCAACTTAGGGCAAAGGAATTACAAAGGGGGTTTCAATGTGATGTTGGTTCAAATATGAAATCCTACTTTATTCCTTTTTCAGGTTGTAAGATGATTAGTATCTGCAATAAGAGAATGAAGTCATTTGACCCATACCCATACGGCCATACCCTTTACCTCTGTCCCTCTCTTCTTTTACCACCCTAACTCCTCCATTTCAACTGCTAGCTTCCCCCTCCCCCTCTACACCTTCCTGTTTTTTCCGTGTCCTTACCTCCATGGTGACCATGTAATTGCAGTAGCAACATCACCTTCTCTTTGCATTAGCAACATCACCTTCTCTTATGGGAAGGAGTCCCCGATCCATGAAATTAAACTAAAGAGTCTACAGTATGCCGTGTTAAACTAATAGTTTGTTGGTTGCCTTCGAGAGGAAGCACCGAAGCATTGTTTCGCTTGGTCAAGGTTTCTTGAGATTTGAGTGAACAGTAAACCCCAAAAGATAACCACACCCTTAACCTTGCTGTGCGCCTGTGCCATGGAAGCAAACATTCTTGGCTCGCAAGCATTATTCTTTATCTTGCGCTGCCATTAATCGAATCACACCATTTGAAATTGTTGCACTTCCCTTAGGCTTTGAGGATAACTGTAGTTTTGTTGATCACATGGAGTCTCAGGGTGGGGGAAATAATATTTACCTAGCTATGTCACTGAAAAGCTACTCTTTGCCGCCTACTTTACACTCTCTGTCATACTCCTGGGTTTGCGTTCCTTTGAACACAATCCCTGAGAAGCCATACAAACCACAAGGTAGCAACAAATTAAACGTCGTGCAAACTTTTAGACCCGTCTTCTTACCATAATTATGACAGAACTTTTATATTAAGAGAGCACCGTTACTGAGGCATAAATTTGAATATTATATTCAAGGACATGTTGGTTATGAACTTATGAAAATTGTCCTTTGTCCTTCCTGTTTATGAATGGGTTCTTCCCGTTATTCCCATTAATCTGTTATCCTCTATTCTGTTGGCCTTGTTAATCCTCATGCTACATGGGCTTGAGTTAGTGTGGCGGCCTACTGTGGTCTAACCTGTAATTTCGGGGCTTCATTTTGATTTTTATTTGTTGTCAACTCAGCATCCCATTTATCTTGTTTCGTATAAGCTGCTAGTGCTTATAGTCTCTGACGTGTAATTAGTTGGTTTCATGTGAAATTCTTGTCTTTATGGATTTCCCCTGCATTTTTCTTGAAATGGTTGCTGCTGATGTCTTGTACTCAAAGCTTATCTCTGAACTTCTGGTGTTTATGCTTTGAAGCTCTTACATGACAACTTATCTTGCTTATACTTCTCTGGTACAAAGACAGGCAACGATTTGGTGGTTGTTGGTGGTGGACATGCTGCCACTATGGCAGTCCTAGCAGCTAAGAAGGGTTTAATGAAACCAGCAGCCATCATAGCTGTAGCTCCAACCTGGGCTGGTCCTCTTCCAATAGTCTTCGGACGTGATTCCAACATGGAGTCCAGGTAATAAAATATTGATTAATTCTCTCCGAGGAATTTTACAGAGTTCAAAGTGTTGTCAAATGGGCATCGACACAGACGTTTAATATCATACTAAGTACTCTTATATGCAGTTGACGTATACTTGGTATTTTTTTAATAGTATTGTTTAGTGTGACATGAAACTCCCTCTTGGTCTTTCATGCATTTTACCATCTTTTCTCTCTTCCAGTCTGAACTTGCTAATATATTTAGGTGTGATATTTGTTTTTGAACTTTGCAAGGTATGGGCTTCTACGGGGAACTTTGAGGGCCCCAGCTTTGGGTTGGATGATGTACAATGTTCTTGTCAGCAACGAAAATGCGATTCAATCCCAGTACAAGTCGCATGTTTATGCAGATCCTGCAAATGTTACCCCAGAAATTGTGCAGAGCAGATATGCATTGACAAAGAAGGAAGGAGCTCGATATGTACCTGCTGCTTTCTTGACAGGTCTCTTAGATCCTGTCAAATCTCGAGAGGAGTTTCTTGATATATTTGCATCAATGGAGGGAAACATTCCTGTTCTAGTAGTTTCAGCTTCCGGTGCTCCAAAAAGGTCAAAGGCTGAGATGGAAGCTCTTCGAGGTGCTAAAGGGGTGTCCAAGTTTGTTGAAGTACCGGGCGCTCTTTTGCCTCAAGAAGAGTACCCCAAGGCTGTTGCTGAGGAAATTCAGAGATTCTTGCTAGAGATTTAAGCAGGGTTTAGAAGAGGTATTTGTTACCTTTTCATCCCTTTCGGGTTTTTCCTACCCTAAATATTATGTCATTGTTTCATGTATAAGTGTATAACAATTTAAGAGTATGTATTCTTATAGAAAAAACAATGTAAAGAGTATACAAAAAATCTGTTCAGAAGTGGAAATTTGTTATGCAGGAAAGTTTGTTTGTGTAATAATTCTTCGTCTGGAATAATCGTGGCATATTTTGAATTCGTTTAAGTCGGTTCATCAATAAGGTGGTGTATCTCCATCTCGAGCTTCAGCTACGCGGTGAAGGAGGAAATGGAAAGCGAGAGGATTGCTCCGGTTAAGCAGTTGCTGTTGTTTTCTAAAATTACTTAAGGGGAGAGGAACAGGAAAGTACACGAAAGGAGTAGAAAGAGACGCAGAGAGCAGCTCCTTGGCTTACTACTCCGTACTTACTAGTGATGATTAGCAGCTAAGTGACAGAATTTGATGAGTTGCTTGTACTACCTCCGTTTCTGAAAGTTCTTTACGCTTTGGAAAATGTGTCAAAAGTATAAAAACTTTGACCGTAAATTCTCACTATTATATACATCAAAACATTACATGTAAGATCTTGTTAGATTGGTCTCGATATGTATTTTCAGAATATCAAAATTTTATAATTTTTTCACATACG GTCAGAACTCAGAACCATCCACGAGAAGAAAACTCCATTCTTTTCTATGGTCAACTGAAAACTGAAGCTTCTTTCGTTTGCATATCTTTCAACTAAATCGTAAACCCTAACCCACATTTCTTTTCATTTTACTCAGAAAATCATTCAGTTATGGCATTTATAGCAACAATTCGATTATCCCCTGTAAAATTCCCAACTCAATTTCAACTACTTTCACTCGAATCGCCTCAACCCACTCTATCCACAAAATCCATAAAATTTAAGCAGCTCAGAGTCAATGCTTCAGCCTCGATTGGTTCTTCCAATGTCCCTGTTGCTGATAAACTCTCCACTCTAAAAAAGAATGATTATTGGCAATGGAAGTTCAGTGACAAATCAATCAAAATTTATTATGAGGAACATGAAAAAGAGGGTTCTGAGCCTAGTAAAAATATGCTAATGATACCCACAATTTCTGATGTTAGCACAATGGAAGAATGGAATTTGGTGGTTTCGGAAATTTTGCAACAGGATGGTAGTGAAAATTTGAGGGCTACACTTGTTGATTGGCCTGGTCTAGGCAACTCAGACCGGCCCAAGTTGGATTATACTGCAGATGTCATGGAGAAGTTCCTATCAGACCTGATTAATTCTCCTGGGAGTCCTGTGTGTAGATCAGGCAACGATTTGGTGGTTGTTGGTGGTGGACATGCTGCCACTATGGCAGTCCTAGCAGCTAAGAAGGGTTTAATGAAACCAGCAGCCATCATAGCTGTAGCTCCAACCTGGGCTGGTCCTCTTCCAATAGTCTTCGGACGTGATTCCAACATGGAGTCCAGGTATGGGCTTCTACGGGGAACTTTGAGGGCCCCAGCTTTGGGTTGGATGATGTACAATGTTCTTGTCAGCAACGAAAATGCGATTCAATCCCAGTACAAGTCGCATGTTTATGCAGATCCTGCAAATGTTACCCCAGAAATTGTGCAGAGCAGATATGCATTGACAAAGAAGGAAGGAGCTCGATATGTACCTGCTGCTTTCTTGACAGGTCTCTTAGATCCTGTCAAATCTCGAGAGGAGTTTCTTGATATATTTGCATCAATGGAGGGAAACATTCCTGTTCTAGTAGTTTCAGCTTCCGGTGCTCCAAAAAGGTCAAAGGCTGAGATGGAAGCTCTTCGAGGTGCTAAAGGGGTGTCCAAGTTTGTTGAAGTACCGGGCGCTCTTTTGCCTCAAGAAGAGTACCCCAAGGCTGTTGCTGAGGAAATTCAGAGATTCTTGCTAGAGATTTAAGCAGGGTTTAGAAGAGGTATTTGTTACCTTTTCATCCCTTTCGGGTTTTTCCTACCCTAAATATTATGTCATTGTTTCATGTATAAGTGTATAACAATTTAAGAGTATGTATTCTTATAGAAAAAACAATGTAAAGAGTATACAAAAAATCTGTTCAGAAGTGGAAATTTGTTATGCAGGAAAGTTTGTTTGTGTAATAATTCTTCGTCTGGAATAATCGTGGCATATTTTGAATTCGTTTAAGTCGGTTCATCAATAAGGTGGTGTATCTCCATCTCGAGCTTCAGCTACGCGGTGAAGGAGGAAATGGAAAGCGAGAGGATTGCTCCGGTTAAGCAGTTGCTGTTGTTTTCTAAAATTACTTAAGGGGAGAGGAACAGGAAAGTACACGAAAGGAGTAGAAAGAGACGCAGAGAGCAGCTCCTTGGCTTACTACTCCGTACTTACTAGTGATGATTAGCAGCTAAGTGACAGAATTTGATGAGTTGCTTGTACTACCTCCGTTTCTGAAAGTTCTTTACGCTTTGGAAAATGTGTCAAAAGTATAAAAACTTTGACCGTAAATTCTCACTATTATATACATCAAAACATTACATGTAAGATCTTGTTAGATTGGTCTCGATATGTATTTTCAGAATATCAAAATTTTATAATTTTTTCACATACG ATGGCATTTATAGCAACAATTCGATTATCCCCTGTAAAATTCCCAACTCAATTTCAACTACTTTCACTCGAATCGCCTCAACCCACTCTATCCACAAAATCCATAAAATTTAAGCAGCTCAGAGTCAATGCTTCAGCCTCGATTGGTTCTTCCAATGTCCCTGTTGCTGATAAACTCTCCACTCTAAAAAAGAATGATTATTGGCAATGGAAGTTCAGTGACAAATCAATCAAAATTTATTATGAGGAACATGAAAAAGAGGGTTCTGAGCCTAGTAAAAATATGCTAATGATACCCACAATTTCTGATGTTAGCACAATGGAAGAATGGAATTTGGTGGTTTCGGAAATTTTGCAACAGGATGGTAGTGAAAATTTGAGGGCTACACTTGTTGATTGGCCTGGTCTAGGCAACTCAGACCGGCCCAAGTTGGATTATACTGCAGATGTCATGGAGAAGTTCCTATCAGACCTGATTAATTCTCCTGGGAGTCCTGTGTGTAGATCAGGCAACGATTTGGTGGTTGTTGGTGGTGGACATGCTGCCACTATGGCAGTCCTAGCAGCTAAGAAGGGTTTAATGAAACCAGCAGCCATCATAGCTGTAGCTCCAACCTGGGCTGGTCCTCTTCCAATAGTCTTCGGACGTGATTCCAACATGGAGTCCAGGTATGGGCTTCTACGGGGAACTTTGAGGGCCCCAGCTTTGGGTTGGATGATGTACAATGTTCTTGTCAGCAACGAAAATGCGATTCAATCCCAGTACAAGTCGCATGTTTATGCAGATCCTGCAAATGTTACCCCAGAAATTGTGCAGAGCAGATATGCATTGACAAAGAAGGAAGGAGCTCGATATGTACCTGCTGCTTTCTTGACAGGTCTCTTAGATCCTGTCAAATCTCGAGAGGAGTTTCTTGATATATTTGCATCAATGGAGGGAAACATTCCTGTTCTAGTAGTTTCAGCTTCCGGTGCTCCAAAAAGGTCAAAGGCTGAGATGGAAGCTCTTCGAGGTGCTAAAGGGGTGTCCAAGTTTGTTGAAGTACCGGGCGCTCTTTTGCCTCAAGAAGAGTACCCCAAGGCTGTTGCTGAGGAAATTCAGAGATTCTTGCTAGAGATTTAA MAFIATIRLSPVKFPTQFQLLSLESPQPTLSTKSIKFKQLRVNASASIGSSNVPVADKLSTLKKNDYWQWKFSDKSIKIYYEEHEKEGSEPSKNMLMIPTISDVSTMEEWNLVVSEILQQDGSENLRATLVDWPGLGNSDRPKLDYTADVMEKFLSDLINSPGSPVCRSGNDLVVVGGGHAATMAVLAAKKGLMKPAAIIAVAPTWAGPLPIVFGRDSNMESRYGLLRGTLRAPALGWMMYNVLVSNENAIQSQYKSHVYADPANVTPEIVQSRYALTKKEGARYVPAAFLTGLLDPVKSREEFLDIFASMEGNIPVLVVSASGAPKRSKAEMEALRGAKGVSKFVEVPGALLPQEEYPKAVAEEIQRFLLEI Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo08097.1 vs. NCBI nr
Match: gi|902107098|gb|KNA03666.1| (hypothetical protein SOVF_206890 [Spinacia oleracea]) HSP 1 Score: 726.9 bits (1875), Expect = 1.800e-206 Identity = 373/373 (100.00%), Postives = 373/373 (100.00%), Query Frame = 1
BLAST of Spo08097.1 vs. NCBI nr
Match: gi|731335039|ref|XP_010678526.1| (PREDICTED: uncharacterized protein LOC104894056 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 638.3 bits (1645), Expect = 8.600e-180 Identity = 319/373 (85.52%), Postives = 347/373 (93.03%), Query Frame = 1
BLAST of Spo08097.1 vs. NCBI nr
Match: gi|225457425|ref|XP_002284929.1| (PREDICTED: uncharacterized protein LOC100260374 [Vitis vinifera]) HSP 1 Score: 503.1 bits (1294), Expect = 4.300e-139 Identity = 251/358 (70.11%), Postives = 298/358 (83.24%), Query Frame = 1
BLAST of Spo08097.1 vs. NCBI nr
Match: gi|922324863|ref|XP_013441824.1| (alpha/beta hydrolase family protein [Medicago truncatula]) HSP 1 Score: 490.7 bits (1262), Expect = 2.200e-135 Identity = 244/344 (70.93%), Postives = 284/344 (82.56%), Query Frame = 1
BLAST of Spo08097.1 vs. NCBI nr
Match: gi|1012344341|gb|KYP55533.1| (hypothetical protein KK1_001745 [Cajanus cajan]) HSP 1 Score: 490.3 bits (1261), Expect = 2.900e-135 Identity = 242/333 (72.67%), Postives = 284/333 (85.29%), Query Frame = 1
BLAST of Spo08097.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QAY6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_206890 PE=4 SV=1) HSP 1 Score: 726.9 bits (1875), Expect = 1.300e-206 Identity = 373/373 (100.00%), Postives = 373/373 (100.00%), Query Frame = 1
BLAST of Spo08097.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CFN6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g114820 PE=4 SV=1) HSP 1 Score: 638.3 bits (1645), Expect = 6.000e-180 Identity = 319/373 (85.52%), Postives = 347/373 (93.03%), Query Frame = 1
BLAST of Spo08097.1 vs. UniProtKB/TrEMBL
Match: F6GT81_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_17s0000g06180 PE=4 SV=1) HSP 1 Score: 503.1 bits (1294), Expect = 3.000e-139 Identity = 251/358 (70.11%), Postives = 298/358 (83.24%), Query Frame = 1
BLAST of Spo08097.1 vs. UniProtKB/TrEMBL
Match: A0A072TEB1_MEDTR (Alpha/beta hydrolase family protein OS=Medicago truncatula GN=MTR_0493s0030 PE=4 SV=1) HSP 1 Score: 490.7 bits (1262), Expect = 1.500e-135 Identity = 244/344 (70.93%), Postives = 284/344 (82.56%), Query Frame = 1
BLAST of Spo08097.1 vs. UniProtKB/TrEMBL
Match: A0A151SL74_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_001745 PE=4 SV=1) HSP 1 Score: 490.3 bits (1261), Expect = 2.000e-135 Identity = 242/333 (72.67%), Postives = 284/333 (85.29%), Query Frame = 1
BLAST of Spo08097.1 vs. TAIR (Arabidopsis)
Match: AT1G74640.1 (alpha/beta-Hydrolases superfamily protein) HSP 1 Score: 461.8 bits (1187), Expect = 3.900e-130 Identity = 235/361 (65.10%), Postives = 282/361 (78.12%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo08097.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo08097.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo08097.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 0
BLAST of Spo08097.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 1
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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