Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AATACTGAGGGGTATTTTAGTCCTTTCAAATTCGTTCCTTGCGTTTTTCCTCCATTTTGATTTTTTCTGATATAGCTGAAGCTTTTCTCCACTCACGCGCGCCCCCCTTTCAAAACAAAACAAACGGAGTTCTTTCATAAGAAAGCCATTCATTACATCCCCTCAAATTTCTGATCCAAATCTGCGCAAAATCGACGATTCGAAACCCTAATCACTCAGCAACAACAATGGTACACTCTTTTCTTCGTTTTTTCTTTTTTTTTTTGAAAAAATATTCCCCCCAATTCCCATCTCACTTTATGTAATCTAGGGTTTTGTGGGAATGCGATTCAGTTTTTTGAAATTCGTTTATAATTGCACAATAATTATGCATTTTGATCAATTTAATTGCTCAATCTTGCAATTAGTTTAATCTATCATCTCTTTTATGTTAAAATGTGGATTTTTCTGAAAGAGGGGCGTTGATTTTTTTCATCTTAATATAGGTATTTTGGGTAATTGATTATTTTGTGATGTCGGGTCGATGATTTTTTAGGAGTTTTGATTTTGTTGAATATGAGATTAAGGTTTGAAAAATAACGTAAATTGTTGAAGAAATTCCCAGGTGTATTAAAAATAGATTTTGTGGTTTGTAAAAAGACTATGGTTCCACATCACAGGATTTATTCTTTTAGCCCAACATTTCGTTTCCCATGCTTTTTTTTGAAGCCCGAGTAGCTATTTGTTTTGTTAAAAGCAATTCGAAACCTTCAATACGGAGCAAAGAAGATGGTTTGTAAATAAGATGCTTTAATCTCATTCTTATTTCATTTTATTGCCATTGCATCATGAAGCATGGTCTCTAAATGAGATTTCTTCTCATTTATCACTCTCACCAATAAGTGGTGCTTATCGTTGTGCTATGAATTGATAGCTGGACAGAACGATGATTGTTAGGAGAATAAAATGGTAATCATGGTAAGTTAAGTCTAGGAATATGTATCTTCAAGTAGGTGGAATTGTGTCAAGGTTACTTACCTAGCATGGCCATTTTCTGTGGTAATCTCATGTTTTTGATATCCTATTGACTTGACTATGAGCTGGATAAGAATCTAGGTTCCTGGGATGATATGTCCTGATATTATTTGGTGTTTCACGACTTTTGAATTGTAATTCTTTGTGAATATGTATGGTTATGAGATTGTAGTTCTGTTAACAATAAAATCGTGTGTATAGCTTTCATGCCTAGTTTATAAATGATCCATTGATCATATCTGCTTGTTTAGTTATGCTTATACTTCGTATTAAGCATTTTGAGTAACTGATTGGACAATATTCTGCTGATTTTATTGCAGGATGGACATGATTCAGATGAACCTAAGCAAAATACCACTGACATGGCTGCATTTGTAAGTTGTTTGACATTTGGCTTAGTTTGAGATGTTATCACTATAAAGTATGATACTTTGGTTTTCGTTTCATTTTCCCAGTAAAGTTACTTTTTTTTTTCCTTTCGCGTGACTTGCAACTTTTTTGGTGGTTTTTTAGTGTTCTAATTTTTTTTTTCAACTTGCCCCTCAGAAGTAATCCTCTTTATACCAGTTTCTCTGCTATGGATCAACTTTTTTTTGCGGGCATGTTCATGTCTGTGGCTGTAGTATTTTCTTTCTAGCAAATTGCATCTTGATTATCTCACTGAATAGAACTTGATTGATTGCATTTTTCTAACTCCCAATAAGATTCATGTCATGTTACCATTGACTTATTTTTGTTGCTGACTATGTAGTATATGTCTGTATAACACTTGGGGGTCTTTGTACTTTTTGAACGAAGTATTGTTCCGCATTACTTATTTGTTTTTTTTTCTTTGTATTCCAGGTACAAAACCTTCTTCAGCAAATGGTAAATGGTGCTTCGTGTACCCCTTTATAATACAAGTATATCCTAATGCTGTTGTTGACATGAAAATTTGTTTTGCAGCAAACTAGGTTTCAAGCAATGTCTGAGAGTATTGTTACGAAAAATATCCTTTTTTAGTTATCTCTTATACATAGTACATTGACCCACAGTGTCTGCTACTCCTTGTATTAAAAAGAAATTCCCTTCCTAGGTATGCTTTTAGTCTTTTATGACCCGACTTTTCTTACCACATGAATTATACTGCTGATGAGACAGTGCTGATTGGAAATTATGCTGTGAATGGAAATTATTTCCTTTCTCGGCGTGCTTTTGGTTTAGGCTTCTCAAAGATGGCATAACTTCGCTTTGTTACCAAATTCCACCTTAAAAGACCATTATTCAAATGTTAACATTAGTTGTTGGTAGTTTGTTAATTTTTGGCTATTGTTTTTTCTTGCCTTGGTTAAAATTACTGTGCCATAATCTTCCATACTGTTGTGTTCTTAACCACAATTGCACTAGATGACATGGGTAATCGCATTGATGAACTGGAGCAGAGCATTAAGGATCTGAAAACAGAAATGGGGCCAGAAGAGTCTCCCTCTCCAGTGGCACCATCAAAACCTAAGCCAGATGATTCCAAACCAGAGGATTCTTGTATCACAACTGAATGAGGTCCATCAAGGTGCTTTACTTTCCATTGGGCTCTTTCTATGTCCGGAAATCAACTCTCCTGAAAATGTTCCTAAACCAACTGTGTGAAGTCTTTATCGTGTTTGTTACACTGCATTTTTTTTTTTTGTATGTATCAGTTGTCTGGTTTAGCTGTTGCCAACTTCATGACTTATGCATAATGTGTGAGGAGGTGATACTAATGATATTTTGTATGGCAAGGATGCTAGTAATCCTTAGCATTTTATCCTAGACATATGGAAGTTGAGGCTATTAGCAACTTTTTGTGCTTTCATCACCTTCATCTTCCATTTCTCTGTAAGGTGAAGACCTTGCTAATCTATTTGTTGTCAATTGTCAAACATTTGTGATGGTTATGAGTCGAATTTGATTTGAAAGTGAAGGAAACTAATAATAGCTGGTTATGAGTCACTAGGAAAAGAATCTTGTGCTTAG AATACTGAGGGGTATTTTAGTCCTTTCAAATTCGTTCCTTGCGTTTTTCCTCCATTTTGATTTTTTCTGATATAGCTGAAGCTTTTCTCCACTCACGCGCGCCCCCCTTTCAAAACAAAACAAACGGAGTTCTTTCATAAGAAAGCCATTCATTACATCCCCTCAAATTTCTGATCCAAATCTGCGCAAAATCGACGATTCGAAACCCTAATCACTCAGCAACAACAATGGATGGACATGATTCAGATGAACCTAAGCAAAATACCACTGACATGGCTGCATTTGTACAAAACCTTCTTCAGCAAATGCAAACTAGGTTTCAAGCAATGTCTGAGAGTATTGTTACGAAAATAGATGACATGGGTAATCGCATTGATGAACTGGAGCAGAGCATTAAGGATCTGAAAACAGAAATGGGGCCAGAAGAGTCTCCCTCTCCAGTGGCACCATCAAAACCTAAGCCAGATGATTCCAAACCAGAGGATTCTTGTATCACAACTGAATGAGGTCCATCAAGGTGCTTTACTTTCCATTGGGCTCTTTCTATGTCCGGAAATCAACTCTCCTGAAAATGTTCCTAAACCAACTGTGTGAAGTCTTTATCGTGTTTGTTACACTGCATTTTTTTTTTTTGTATGTATCAGTTGTCTGGTTTAGCTGTTGCCAACTTCATGACTTATGCATAATGTGTGAGGAGGTGATACTAATGATATTTTGTATGGCAAGGATGCTAGTAATCCTTAGCATTTTATCCTAGACATATGGAAGTTGAGGCTATTAGCAACTTTTTGTGCTTTCATCACCTTCATCTTCCATTTCTCTGTAAGGTGAAGACCTTGCTAATCTATTTGTTGTCAATTGTCAAACATTTGTGATGGTTATGAGTCGAATTTGATTTGAAAGTGAAGGAAACTAATAATAGCTGGTTATGAGTCACTAGGAAAAGAATCTTGTGCTTAG ATGGATGGACATGATTCAGATGAACCTAAGCAAAATACCACTGACATGGCTGCATTTGTACAAAACCTTCTTCAGCAAATGCAAACTAGGTTTCAAGCAATGTCTGAGAGTATTGTTACGAAAATAGATGACATGGGTAATCGCATTGATGAACTGGAGCAGAGCATTAAGGATCTGAAAACAGAAATGGGGCCAGAAGAGTCTCCCTCTCCAGTGGCACCATCAAAACCTAAGCCAGATGATTCCAAACCAGAGGATTCTTGTATCACAACTGAATGA MDGHDSDEPKQNTTDMAAFVQNLLQQMQTRFQAMSESIVTKIDDMGNRIDELEQSIKDLKTEMGPEESPSPVAPSKPKPDDSKPEDSCITTE Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo07967.1 vs. NCBI nr
Match: gi|902210746|gb|KNA16521.1| (hypothetical protein SOVF_088400 [Spinacia oleracea]) HSP 1 Score: 177.6 bits (449), Expect = 1.000e-41 Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 1
BLAST of Spo07967.1 vs. NCBI nr
Match: gi|731346539|ref|XP_010684507.1| (PREDICTED: heat shock factor-binding protein 1 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 140.2 bits (352), Expect = 1.800e-30 Identity = 72/87 (82.76%), Postives = 79/87 (90.80%), Query Frame = 1
BLAST of Spo07967.1 vs. NCBI nr
Match: gi|502112536|ref|XP_004494363.1| (PREDICTED: heat shock factor-binding protein 1-like [Cicer arietinum]) HSP 1 Score: 122.1 bits (305), Expect = 5.100e-25 Identity = 63/87 (72.41%), Postives = 75/87 (86.21%), Query Frame = 1
BLAST of Spo07967.1 vs. NCBI nr
Match: gi|1009148584|ref|XP_015892016.1| (PREDICTED: heat shock factor-binding protein 1 [Ziziphus jujuba]) HSP 1 Score: 122.1 bits (305), Expect = 5.100e-25 Identity = 64/86 (74.42%), Postives = 76/86 (88.37%), Query Frame = 1
BLAST of Spo07967.1 vs. NCBI nr
Match: gi|720011634|ref|XP_010259628.1| (PREDICTED: heat shock factor-binding protein 1-like [Nelumbo nucifera]) HSP 1 Score: 121.3 bits (303), Expect = 8.700e-25 Identity = 62/86 (72.09%), Postives = 75/86 (87.21%), Query Frame = 1
BLAST of Spo07967.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RAJ5_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_088400 PE=4 SV=1) HSP 1 Score: 177.6 bits (449), Expect = 7.100e-42 Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 1
BLAST of Spo07967.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C1B3_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g164610 PE=4 SV=1) HSP 1 Score: 140.2 bits (352), Expect = 1.300e-30 Identity = 72/87 (82.76%), Postives = 79/87 (90.80%), Query Frame = 1
BLAST of Spo07967.1 vs. UniProtKB/TrEMBL
Match: M5XMV9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa014018mg PE=4 SV=1) HSP 1 Score: 120.6 bits (301), Expect = 1.000e-24 Identity = 63/87 (72.41%), Postives = 73/87 (83.91%), Query Frame = 1
BLAST of Spo07967.1 vs. UniProtKB/TrEMBL
Match: V7BG57_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G106500g PE=4 SV=1) HSP 1 Score: 118.6 bits (296), Expect = 3.900e-24 Identity = 63/87 (72.41%), Postives = 71/87 (81.61%), Query Frame = 1
BLAST of Spo07967.1 vs. UniProtKB/TrEMBL
Match: A0A067H5L4_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g034185mg PE=4 SV=1) HSP 1 Score: 118.6 bits (296), Expect = 3.900e-24 Identity = 61/86 (70.93%), Postives = 72/86 (83.72%), Query Frame = 1
BLAST of Spo07967.1 vs. ExPASy Swiss-Prot
Match: HSBP1_PONAB (Heat shock factor-binding protein 1 OS=Pongo abelii GN=HSBP1 PE=3 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 5.100e-9 Identity = 32/60 (53.33%), Postives = 44/60 (73.33%), Query Frame = 1
BLAST of Spo07967.1 vs. ExPASy Swiss-Prot
Match: HSBP1_BOVIN (Heat shock factor-binding protein 1 OS=Bos taurus GN=HSBP1 PE=3 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 6.700e-9 Identity = 33/63 (52.38%), Postives = 45/63 (71.43%), Query Frame = 1
BLAST of Spo07967.1 vs. ExPASy Swiss-Prot
Match: HSBP1_HUMAN (Heat shock factor-binding protein 1 OS=Homo sapiens GN=HSBP1 PE=1 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 6.700e-9 Identity = 33/63 (52.38%), Postives = 45/63 (71.43%), Query Frame = 1
BLAST of Spo07967.1 vs. ExPASy Swiss-Prot
Match: HSBP1_RAT (Heat shock factor-binding protein 1 OS=Rattus norvegicus GN=Hsbp1 PE=3 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 3.300e-8 Identity = 29/53 (54.72%), Postives = 40/53 (75.47%), Query Frame = 1
BLAST of Spo07967.1 vs. ExPASy Swiss-Prot
Match: HSBP1_MOUSE (Heat shock factor-binding protein 1 OS=Mus musculus GN=Hsbp1 PE=1 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 1.600e-7 Identity = 32/65 (49.23%), Postives = 44/65 (67.69%), Query Frame = 1
BLAST of Spo07967.1 vs. TAIR (Arabidopsis)
Match: AT4G15802.1 (heat shock factor binding protein) HSP 1 Score: 107.1 bits (266), Expect = 6.000e-24 Identity = 55/79 (69.62%), Postives = 65/79 (82.28%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo07967.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo07967.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo07967.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo07967.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 1
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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