Spo07822 (gene)

Overview
NameSpo07822
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
Locationchr1 : 45750140 .. 45752033 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGCATAAGTTTTCACATTTATAGGTCAGATGGAGTTCTTTTATGATCAAGCACCTGATGCAATGAGAAGTTTATGTATGCTTATTTCTAAGTATTCTATGCTACATTGCTACATGTTTATTTAGTTTTTTTACAGGACCTTAAATTATGATATAATTATTATTTACATTTTACAGGGCTAAAAATCTTAAATTATGCTACATTATTATTTAAAGAAGTATGATAAAAGATTTTATAAATAAATCGGGTACCATGTGACCCGACCCGAAATAACCGGGTAGGTACCCGGTTATTCCGGGTCGGGCATGGGCCGAAAAACTGACTACCCGGAACCGGGTACCCGCATTTTCGGGTACCCGTTTAGCCGGGAACCCAATAATGAACACCCCTACCCTACCATCTAATTAAATAATATATATCTAATTTTCCTATGACCACAATCCTATTAAACAAATAATTTTAGAAACCCACCCCACTTCCCATCTCCCAAAATGACATGGTCCCCCACTTATTTACTTATTAAAATATCTACCCAACCTCAATTACTTTATTATTTAATTTAATTCAATTCTTTTTGTTAATACTCGTGGCCGGCCAATTGTATTTATCTCCTAATTTTATAGAAATCATGCCCATACTAGTTTAATACGAAGTAAATAAATCTGATTTTAACACTCCAGACTTTCATCTGTCCAGGACACGTATCACCTCCACATTCTTCCAGATGTTTCGCGAAAGACTGAGAGATCAGAGTTTCCAGAAATTTCTCTTCCAATTATTAAATTCCACCATTTCCATTTCTCCTTCACTCTTTGACGCTCATCTCACTTCAACAATTTCAATTGCAACAACTCTCTACAGGTCAGTTCATCATTTCTAACTCAAATAATTTCTACACTTTATCTAGTGCTAGAATTTGTTGCTTTTAGCTCGTTAGCGCATAATTGCTCTCTGTTTTCTCTTCAAATTATTTTACTGATACAAGTGCAGAGATCATTCCTTCCGTATGCGATTACTAAATCGGGATGTTGTTGTAGTTTGACAGAAGTTCAAATACAGGGAAAACATGGCACTAGTTGAGGAAATGTGCAACATGGGTTTCGGAAATTTGATGAACGATCAAGATCTTCTGACAAAGGTATTAAACCGGTTCACCAAAGGAGACATGAATTCTGGGGATAAAACTCAGACTCCTCTTGCTGATATCCTTTCCACCCCCAAGGAGTACATCTTTCACGTCGATGTTCCCGGTCTTTCAAAGTCTGATATTCAGGTAATCCCAGAATTCGAACTATATCTTTAACTTCATGTTGAAAAATACTTTAATAGATCACTTACTGAGACGCCCGTTCTGTAATGTAGGTGCAATTGGAAGATGAGAATGTATTAGTGATCAAGGCGAGTGGGAAAAGGAAGAGGGAAGACGGAGAAGAAGAAGGATGCAAATACCTCAAGTTAGAAAGAAGTGTTTCCCAGAAAATGATGAGGAAGTTCCGACTACCTCAGGATGCTGATTCTTCTTCCATATCTGCTAAGTGCGAAAATGGAGTTCTTACTGTTACTGTGCAGAAGATCCCACCTTCTAAGCCTAAGACTGTTCAAGTTACTATCTCCTAGAATGTTCTTAGAGATTCGAATTTCGAGTACGATGTAATGGGTTTTGGGTGTTGGATTTCTAGTTCTGGTTTTTGTTCGAAAGCTCTATGAAAGATTACTAATTCTGGGTTTGGGGTGTTAGATTTGTAGTTCATAGAGATTCGAACGAAATCCATCTCTGTATCCTTGTATCTTTTGATCAACATGAATATTGTGAAATTAGCTCAAAATCACGAATCCTTATCTTTTAATCAACATAAATATTGTGAAAATTAGCTCAAAAATCATGAATTTGA

mRNA sequence

ATGTGCATAAGTTTTCACATTTATAGGACACGTATCACCTCCACATTCTTCCAGATGTTTCGCGAAAGACTGAGAGATCAGAGTTTCCAGAAATTTCTCTTCCAATTATTAAATTCCACCATTTCCATTTCTCCTTCACTCTTTGACGCTCATCTCACTTCAACAATTTCAATTGCAACAACTCTCTACAGTTTGACAGAAGTTCAAATACAGGGAAAACATGGCACTAGTTGAGGAAATGTGCAACATGGGTTTCGGAAATTTGATGAACGATCAAGATCTTCTGACAAAGGTATTAAACCGGTTCACCAAAGGAGACATGAATTCTGGGGATAAAACTCAGACTCCTCTTGCTGATATCCTTTCCACCCCCAAGGAGTACATCTTTCACGTCGATGTTCCCGGTCTTTCAAAGTCTGATATTCAGGTGCAATTGGAAGATGAGAATGTATTAGTGATCAAGGCGAGTGGGAAAAGGAAGAGGGAAGACGGAGAAGAAGAAGGATGCAAATACCTCAAGTTAGAAAGAAGTGTTTCCCAGAAAATGATGAGGAAGTTCCGACTACCTCAGGATGCTGATTCTTCTTCCATATCTGCTAAGTGCGAAAATGGAGTTCTTACTGTTACTGTGCAGAAGATCCCACCTTCTAAGCCTAAGACTGTTCAAGTTACTATCTCCTAGAATGTTCTTAGAGATTCGAATTTCGAGTACGATGTAATGGGTTTTGGGTGTTGGATTTCTAGTTCTGGTTTTTGTTCGAAAGCTCTATGAAAGATTACTAATTCTGGGTTTGGGGTGTTAGATTTGTAGTTCATAGAGATTCGAACGAAATCCATCTCTGTATCCTTGTATCTTTTGATCAACATGAATATTGTGAAATTAGCTCAAAATCACGAATCCTTATCTTTTAATCAACATAAATATTGTGAAAATTAGCTCAAAAATCATGAATTTGA

Coding sequence (CDS)

ATGTGCATAAGTTTTCACATTTATAGGACACGTATCACCTCCACATTCTTCCAGATGTTTCGCGAAAGACTGAGAGATCAGAGTTTCCAGAAATTTCTCTTCCAATTATTAAATTCCACCATTTCCATTTCTCCTTCACTCTTTGACGCTCATCTCACTTCAACAATTTCAATTGCAACAACTCTCTACAGTTTGACAGAAGTTCAAATACAGGGAAAACATGGCACTAGTTGA

Protein sequence

MCISFHIYRTRITSTFFQMFRERLRDQSFQKFLFQLLNSTISISPSLFDAHLTSTISIATTLYSLTEVQIQGKHGTS
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo07822.1Spo07822.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo07822.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo07822.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo07822.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo07822.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0009408 response to heat
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:0043565 sequence-specific DNA binding
RNA-Seq Expression
   



Co-expression
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