Spo07806 (gene)

Overview
NameSpo07806
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionGibberellin-regulated protein 10 (GAST1 protein homolog 10) (Precursor)
Locationchr1 : 46130519 .. 46131962 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CGTGGATTCTGATTACAAAACCACCGACCAGATTTTAAATTCCTAAAATTCAGTACAATTGGCACCAGCTGTGTCTTCTTTGGCTGCCTTTAATTTTATTAATCATCCCATCTACTTGATTTTTATTTCAATTATTTTGTTTAACTTTAGATGTACCATTTTATCTATATATACCCCCTTTATATTTCTTATACAAAATAAATCAAACCAAACAAATAATTCATACTTATAAATCCAAACAAAATGATGAAGAAAATCTCACTTACAACTCTTGTTCTAGTTTCTATTGTTATAACTTGTGCTTTCATTCAGATTGCTGATGCTGTTTCAGCTCCTCCTACAGCTCCTCCTACTCAACCCCCTACCGGAGGTATATATATATTTTTTACTTCTTTTATACATTTTTGTAATGTAGGTCGTGTTTAGAGTTTATCATACTTGATTTATCTTTTTTTTTTTTTTGGACATAGACTTAATATTACATAAATGAAAAGGTTTACACACTACTTAAGAACCTGTAAAGCGCGCTTGACATACAAGGAAAGAAGTAGAAGAGTAGTAACGACACGAGTCGGTTGCAAAGAGCCTGTGAACTGCTCACAAGCTATAAGAATCATAAAAAATAACCCGAAAAGCATGCTATGAAGTATGAACCCCCATAAAATGAGGAACAACGTAACATTATTTATCTATACTTAAAACATGATAAACTCGTACATTATTTTTAATAACGCCGTAATATTATTTTTGGAGAACAATAGTCAAAACGGTATCGTCAATGAAGTCAAAAGCGTGCAAGTAAGAAAGTATTCTAGGACTATCCGAAAGATCTCAAGTCATTGACTTCATTCTGCAGTGCTCCGTACATGTTTAGTCAACGATTTTTGACTGAGATTCTGATCGTTTTTTTAATTGTGATTAATTATTCGTGTCAAATCATATTCTTAGTTACGTTAACCCAGTACTAATTAGTGAAACTAGGTCAAGAAAACCAAATTTGAAAGAAGAGTAGATCATTTAGACACCTAAATATAGTATACACTTTTTTGGTAGTTAATCAAACCATTCCACATGTTTAGGTTGCGTTTTCTTCGCCTGTTCTAGTATGATTTTTCAAGTTTCTAATCTGACATAGAATAAAGGTTTTTAGGAGTGTTTTTTGCTTATTCTGTTATGATCTGATTTTTCTGAACTGATCTAATGATGCAATGGCTAACATTTGAAATTGGTGTTTGTGTATGGTAAAACTACAGTGCCAAAAACTTGTGCGGAGAAATGCGCATATAGATGCTCAAGGAATCCCAGGAACTTATGTAAGACATTGTGCATAAGTTGCTGCGCAAAATGCAATCAGTGCGTTCCTTCAGGCCCTTTCGCCGACAAAAGCGAGTGCCCTTGCTACAGAGACATCAAGACCAAGAAAGGCCTATCTAAGTGCCCTTAA

mRNA sequence

CGTGGATTCTGATTACAAAACCACCGACCAGATTTTAAATTCCTAAAATTCAGTACAATTGGCACCAGCTGTGTCTTCTTTGGCTGCCTTTAATTTTATTAATCATCCCATCTACTTGATTTTTATTTCAATTATTTTGTTTAACTTTAGATGTACCATTTTATCTATATATACCCCCTTTATATTTCTTATACAAAATAAATCAAACCAAACAAATAATTCATACTTATAAATCCAAACAAAATGATGAAGAAAATCTCACTTACAACTCTTGTTCTAGTTTCTATTGTTATAACTTGTGCTTTCATTCAGATTGCTGATGCTGTTTCAGCTCCTCCTACAGCTCCTCCTACTCAACCCCCTACCGGAGTGCCAAAAACTTGTGCGGAGAAATGCGCATATAGATGCTCAAGGAATCCCAGGAACTTATGTAAGACATTGTGCATAAGTTGCTGCGCAAAATGCAATCAGTGCGTTCCTTCAGGCCCTTTCGCCGACAAAAGCGAGTGCCCTTGCTACAGAGACATCAAGACCAAGAAAGGCCTATCTAAGTGCCCTTAA

Coding sequence (CDS)

ATGATGAAGAAAATCTCACTTACAACTCTTGTTCTAGTTTCTATTGTTATAACTTGTGCTTTCATTCAGATTGCTGATGCTGTTTCAGCTCCTCCTACAGCTCCTCCTACTCAACCCCCTACCGGAGTGCCAAAAACTTGTGCGGAGAAATGCGCATATAGATGCTCAAGGAATCCCAGGAACTTATGTAAGACATTGTGCATAAGTTGCTGCGCAAAATGCAATCAGTGCGTTCCTTCAGGCCCTTTCGCCGACAAAAGCGAGTGCCCTTGCTACAGAGACATCAAGACCAAGAAAGGCCTATCTAAGTGCCCTTAA

Protein sequence

MMKKISLTTLVLVSIVITCAFIQIADAVSAPPTAPPTQPPTGVPKTCAEKCAYRCSRNPRNLCKTLCISCCAKCNQCVPSGPFADKSECPCYRDIKTKKGLSKCP
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo07806.1Spo07806.1mRNA


Homology
[Close]
BLAST of Spo07806.1 vs. NCBI nr
Match: gi|902240262|gb|KNA25943.1| (hypothetical protein SOVF_001590 [Spinacia oleracea])

HSP 1 Score: 214.9 bits (546), Expect = 6.600e-53
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 1 

		  

Query: 1   MMKKISLTTLVLVSIVITCAFIQIADAVSAPPTAPPTQPPTGVPKTCAEKCAYRCSRNPR 60
           MMKKISLTTLVLVSIVITCAFIQIADAVSAPPTAPPTQPPTGVPKTCAEKCAYRCSRNPR
Sbjct: 1   MMKKISLTTLVLVSIVITCAFIQIADAVSAPPTAPPTQPPTGVPKTCAEKCAYRCSRNPR 60

Query: 61  NLCKTLCISCCAKCNQCVPSGPFADKSECPCYRDIKTKKGLSKCP 106
           NLCKTLCISCCAKCNQCVPSGPFADKSECPCYRDIKTKKGLSKCP
Sbjct: 61  NLCKTLCISCCAKCNQCVPSGPFADKSECPCYRDIKTKKGLSKCP 105
[Close]
BLAST of Spo07806.1 vs. NCBI nr
Match: gi|731347878|ref|XP_010685206.1| (PREDICTED: peamaclein-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 147.9 bits (372), Expect = 9.900e-33
Identity = 68/104 (65.38%), Postives = 79/104 (75.96%), Query Frame = 1 

		  

Query: 2   MKKISLTTLVLVSIVITCAFIQIADAVSAPPTAPPTQPPTGVPKTCAEKCAYRCSRNPRN 61
           MKK S+ TL L+SIV++C F +IADA  + P +PP Q P GVP  C  KCAYRCSRNPRN
Sbjct: 1   MKKFSVPTLFLISIVLSCVFFEIADAAVSAPASPPIQAPPGVPAICVSKCAYRCSRNPRN 60

Query: 62  LCKTLCISCCAKCNQCVPSGPFADKSECPCYRDIKTKKGLSKCP 106
           LCK LC+SCCA C  CVP GPF DK++CPCYRDIK  +G SKCP
Sbjct: 61  LCKKLCMSCCASCKGCVPYGPFGDKNQCPCYRDIKNNEGESKCP 104
[Close]
BLAST of Spo07806.1 vs. NCBI nr
Match: gi|870852845|gb|KMT04726.1| (hypothetical protein BVRB_7g169070 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 126.7 bits (317), Expect = 2.400e-26
Identity = 64/104 (61.54%), Postives = 77/104 (74.04%), Query Frame = 1 

		  

Query: 2   MKKISLTTLVLVSIVITCAFIQIADAVSAPPTAPPTQPPTGVPKTCAEKCAYRCSRNPRN 61
           MKK+S+ TL+L+SIV+T A ++IADA S+P          G P  C  KCA RCS+NPRN
Sbjct: 1   MKKLSIPTLLLISIVLTSAVLEIADATSSP----------GGPDFCPSKCASRCSKNPRN 60

Query: 62  LCKTLCISCCAKCNQCVPSGPFADKSECPCYRDIKTKKGLSKCP 106
           LCK LC+ CC+KC +CVPSGP ADKSECPCYRD K KKG+ KCP
Sbjct: 61  LCKKLCMICCSKC-KCVPSGPLADKSECPCYRDWKNKKGMDKCP 93
[Close]
BLAST of Spo07806.1 vs. NCBI nr
Match: gi|629088540|gb|KCW54793.1| (hypothetical protein EUGRSUZ_I00734 [Eucalyptus grandis])

HSP 1 Score: 82.0 bits (201), Expect = 6.700e-13
Identity = 46/103 (44.66%), Postives = 65/103 (63.11%), Query Frame = 1 

		  

Query: 4   KISLTTLVLVSIVITCAFIQIADAVSAPPTAPPTQPPTGVPKTCAEKCAYRCSRNPR-NL 63
           K++  TL+LVS+V++ +   +A  +S  P+          P +C  KCA RC ++ R + 
Sbjct: 2   KLAFATLLLVSLVLSFSIHAMAGDLSPQPS----------PSSCDAKCAVRCQKSWRKDK 61

Query: 64  CKTLCISCCAKCNQCVPSGPFADKSECPCYRDIKTKKGLSKCP 106
           C   C  CC KC+ CVPSGP+ADKSECPCYRD+K+ +G  KCP
Sbjct: 62  CLKYCGICCQKCH-CVPSGPYADKSECPCYRDMKSPQGKDKCP 93
[Close]
BLAST of Spo07806.1 vs. NCBI nr
Match: gi|976925029|gb|KVI08947.1| (Gibberellin regulated protein [Cynara cardunculus var. scolymus])

HSP 1 Score: 80.5 bits (197), Expect = 1.900e-12
Identity = 44/102 (43.14%), Postives = 57/102 (55.88%), Query Frame = 1 

		  

Query: 5   ISLTTLVLVSIVITCAFIQIADAVSAPPTAPPTQPPTGVPKTCAEKCAYRCSRNP-RNLC 64
           + L       +++T  FI    + SA     P   P+G    C  KCAYRCSR+  ++ C
Sbjct: 1   MKLVPFAAALLIVTLLFIT---SFSATAVLSPAPAPSGFGFECDAKCAYRCSRSGWKDQC 60

Query: 65  KTLCISCCAKCNQCVPSGPFADKSECPCYRDIKTKKGLSKCP 106
              C  CC KC  CVPSGP+ADK++CP YRD+K  KG  KCP
Sbjct: 61  LKYCGICCGKCKGCVPSGPYADKAQCPSYRDLKNPKGRDKCP 99
[Close]
BLAST of Spo07806.1 vs. UniProtKB/TrEMBL
Match: A0A0K9S2K8_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_001590 PE=4 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 4.600e-53
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 1 

		  

Query: 1   MMKKISLTTLVLVSIVITCAFIQIADAVSAPPTAPPTQPPTGVPKTCAEKCAYRCSRNPR 60
           MMKKISLTTLVLVSIVITCAFIQIADAVSAPPTAPPTQPPTGVPKTCAEKCAYRCSRNPR
Sbjct: 1   MMKKISLTTLVLVSIVITCAFIQIADAVSAPPTAPPTQPPTGVPKTCAEKCAYRCSRNPR 60

Query: 61  NLCKTLCISCCAKCNQCVPSGPFADKSECPCYRDIKTKKGLSKCP 106
           NLCKTLCISCCAKCNQCVPSGPFADKSECPCYRDIKTKKGLSKCP
Sbjct: 61  NLCKTLCISCCAKCNQCVPSGPFADKSECPCYRDIKTKKGLSKCP 105
[Close]
BLAST of Spo07806.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BUA3_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g169080 PE=4 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 6.900e-33
Identity = 68/104 (65.38%), Postives = 79/104 (75.96%), Query Frame = 1 

		  

Query: 2   MKKISLTTLVLVSIVITCAFIQIADAVSAPPTAPPTQPPTGVPKTCAEKCAYRCSRNPRN 61
           MKK S+ TL L+SIV++C F +IADA  + P +PP Q P GVP  C  KCAYRCSRNPRN
Sbjct: 1   MKKFSVPTLFLISIVLSCVFFEIADAAVSAPASPPIQAPPGVPAICVSKCAYRCSRNPRN 60

Query: 62  LCKTLCISCCAKCNQCVPSGPFADKSECPCYRDIKTKKGLSKCP 106
           LCK LC+SCCA C  CVP GPF DK++CPCYRDIK  +G SKCP
Sbjct: 61  LCKKLCMSCCASCKGCVPYGPFGDKNQCPCYRDIKNNEGESKCP 104
[Close]
BLAST of Spo07806.1 vs. UniProtKB/TrEMBL
Match: A0A0J8ENZ8_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g169070 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 1.600e-26
Identity = 64/104 (61.54%), Postives = 77/104 (74.04%), Query Frame = 1 

		  

Query: 2   MKKISLTTLVLVSIVITCAFIQIADAVSAPPTAPPTQPPTGVPKTCAEKCAYRCSRNPRN 61
           MKK+S+ TL+L+SIV+T A ++IADA S+P          G P  C  KCA RCS+NPRN
Sbjct: 1   MKKLSIPTLLLISIVLTSAVLEIADATSSP----------GGPDFCPSKCASRCSKNPRN 60

Query: 62  LCKTLCISCCAKCNQCVPSGPFADKSECPCYRDIKTKKGLSKCP 106
           LCK LC+ CC+KC +CVPSGP ADKSECPCYRD K KKG+ KCP
Sbjct: 61  LCKKLCMICCSKC-KCVPSGPLADKSECPCYRDWKNKKGMDKCP 93
[Close]
BLAST of Spo07806.1 vs. UniProtKB/TrEMBL
Match: A0A059ALR5_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I00734 PE=4 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 4.700e-13
Identity = 46/103 (44.66%), Postives = 65/103 (63.11%), Query Frame = 1 

		  

Query: 4   KISLTTLVLVSIVITCAFIQIADAVSAPPTAPPTQPPTGVPKTCAEKCAYRCSRNPR-NL 63
           K++  TL+LVS+V++ +   +A  +S  P+          P +C  KCA RC ++ R + 
Sbjct: 2   KLAFATLLLVSLVLSFSIHAMAGDLSPQPS----------PSSCDAKCAVRCQKSWRKDK 61

Query: 64  CKTLCISCCAKCNQCVPSGPFADKSECPCYRDIKTKKGLSKCP 106
           C   C  CC KC+ CVPSGP+ADKSECPCYRD+K+ +G  KCP
Sbjct: 62  CLKYCGICCQKCH-CVPSGPYADKSECPCYRDMKSPQGKDKCP 93
[Close]
BLAST of Spo07806.1 vs. UniProtKB/TrEMBL
Match: A0A103YH22_CYNCS (Gibberellin regulated protein OS=Cynara cardunculus var. scolymus GN=Ccrd_012669 PE=4 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 1.400e-12
Identity = 44/102 (43.14%), Postives = 57/102 (55.88%), Query Frame = 1 

		  

Query: 5   ISLTTLVLVSIVITCAFIQIADAVSAPPTAPPTQPPTGVPKTCAEKCAYRCSRNP-RNLC 64
           + L       +++T  FI    + SA     P   P+G    C  KCAYRCSR+  ++ C
Sbjct: 1   MKLVPFAAALLIVTLLFIT---SFSATAVLSPAPAPSGFGFECDAKCAYRCSRSGWKDQC 60

Query: 65  KTLCISCCAKCNQCVPSGPFADKSECPCYRDIKTKKGLSKCP 106
              C  CC KC  CVPSGP+ADK++CP YRD+K  KG  KCP
Sbjct: 61  LKYCGICCGKCKGCVPSGPYADKAQCPSYRDLKNPKGRDKCP 99
[Close]
BLAST of Spo07806.1 vs. ExPASy Swiss-Prot
Match: GASAA_ARATH (Gibberellin-regulated protein 10 OS=Arabidopsis thaliana GN=GASA10 PE=2 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 3.900e-13
Identity = 41/103 (39.81%), Postives = 56/103 (54.37%), Query Frame = 1 

		  

Query: 4   KISLTTLVLVSIVITCAFIQIADAVSAPPTAPPTQPPTGVPKTCAEKCAYRCSRNPR-NL 63
           K     ++++S++IT +   ++ A S+P               C  KC  RCS+  R + 
Sbjct: 2   KFPAVKVLIISLLITSSLFILSTADSSP---------------CGGKCNVRCSKAGRQDR 61

Query: 64  CKTLCISCCAKCNQCVPSGPFADKSECPCYRDIKTKKGLSKCP 106
           C   C  CC KCN CVPSG + +K ECPCYRD+K  KG SKCP
Sbjct: 62  CLKYCNICCEKCNYCVPSGTYGNKDECPCYRDMKNSKGTSKCP 89
[Close]
BLAST of Spo07806.1 vs. ExPASy Swiss-Prot
Match: GAST1_SOLLC (Protein GAST1 OS=Solanum lycopersicum GN=GAST1 PE=2 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 4.800e-11
Identity = 31/63 (49.21%), Postives = 39/63 (61.90%), Query Frame = 1 

		  

Query: 44  PKTCAEKCAYRCSRNP-RNLCKTLCISCCAKCNQCVPSGPFADKSECPCYRDIKTKKGLS 103
           P+ C  KC YRCS+   +  C   C  CCAKC  CVP+G + +K  CPCY + KTK+G  
Sbjct: 51  PQDCQPKCTYRCSKTSYKKPCMFFCQKCCAKC-LCVPAGTYGNKQSCPCYNNWKTKRGGP 110

Query: 104 KCP 106
           KCP
Sbjct: 111 KCP 112
[Close]
BLAST of Spo07806.1 vs. ExPASy Swiss-Prot
Match: SNAK1_SOLTU (Snakin-1 OS=Solanum tuberosum GN=SN1 PE=1 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 4.800e-11
Identity = 44/103 (42.72%), Postives = 56/103 (54.37%), Query Frame = 1 

		  

Query: 4   KISLTTLVLVSIVITCAFIQIADAVSAPPTAPPTQPPTGVPKTCAEKCAYRCSR-NPRNL 63
           K+ L TL+LV++VIT + IQ   A S+                C  KC  RCS+    + 
Sbjct: 2   KLFLLTLLLVTLVITPSLIQTTMAGSS---------------FCDSKCKLRCSKAGLADR 61

Query: 64  CKTLCISCCAKCNQCVPSGPFADKSECPCYRDIKTKKGLSKCP 106
           C   C  CC +C +CVPSG + +K ECPCYRD K  KG SKCP
Sbjct: 62  CLKYCGICCEEC-KCVPSGTYGNKHECPCYRDKKNSKGKSKCP 88
[Close]
BLAST of Spo07806.1 vs. ExPASy Swiss-Prot
Match: GASA8_ARATH (Gibberellin-regulated protein 8 OS=Arabidopsis thaliana GN=At2g39540 PE=2 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 8.200e-11
Identity = 40/103 (38.83%), Postives = 53/103 (51.46%), Query Frame = 1 

		  

Query: 4   KISLTTLVLVSIVITCAFIQIADAVSAPPTAPPTQPPTGVPKTCAEKCAYRCSR-NPRNL 63
           K+ +    ++S+++T +F  ++ A S+                C  KC  RCS+      
Sbjct: 2   KLVVVQFFIISLLLTSSFSVLSSADSS----------------CGGKCNVRCSKAGQHEE 61

Query: 64  CKTLCISCCAKCNQCVPSGPFADKSECPCYRDIKTKKGLSKCP 106
           C   C  CC KCN CVPSG F  K ECPCYRD+K  KG SKCP
Sbjct: 62  CLKYCNICCQKCN-CVPSGTFGHKDECPCYRDMKNSKGGSKCP 87
[Close]
BLAST of Spo07806.1 vs. ExPASy Swiss-Prot
Match: PMLN_PRUPE (Peamaclein OS=Prunus persica PE=1 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 1.400e-10
Identity = 31/60 (51.67%), Postives = 37/60 (61.67%), Query Frame = 1 

		  

Query: 47  CAEKCAYRCSR-NPRNLCKTLCISCCAKCNQCVPSGPFADKSECPCYRDIKTKKGLSKCP 106
           C  KC  RCS+   +  C   C  CC KC+ CVPSG + +K ECPCYRD+K  KG  KCP
Sbjct: 5   CDSKCGVRCSKAGYQERCLKYCGICCEKCH-CVPSGTYGNKDECPCYRDLKNSKGNPKCP 63
[Close]
BLAST of Spo07806.1 vs. TAIR (Arabidopsis)
Match: AT5G59845.1 (Gibberellin-regulated family protein)

HSP 1 Score: 75.5 bits (184), Expect = 2.200e-14
Identity = 41/103 (39.81%), Postives = 56/103 (54.37%), Query Frame = 1 

		  

Query: 4   KISLTTLVLVSIVITCAFIQIADAVSAPPTAPPTQPPTGVPKTCAEKCAYRCSRNPR-NL 63
           K     ++++S++IT +   ++ A S+P               C  KC  RCS+  R + 
Sbjct: 2   KFPAVKVLIISLLITSSLFILSTADSSP---------------CGGKCNVRCSKAGRQDR 61

Query: 64  CKTLCISCCAKCNQCVPSGPFADKSECPCYRDIKTKKGLSKCP 106
           C   C  CC KCN CVPSG + +K ECPCYRD+K  KG SKCP
Sbjct: 62  CLKYCNICCEKCNYCVPSGTYGNKDECPCYRDMKNSKGTSKCP 89
[Close]
BLAST of Spo07806.1 vs. TAIR (Arabidopsis)
Match: AT1G10588.1 (Gibberellin-regulated family protein)

HSP 1 Score: 68.2 bits (165), Expect = 3.500e-12
Identity = 41/106 (38.68%), Postives = 56/106 (52.83%), Query Frame = 1 

		  

Query: 2   MKKISLTTLVLVSIVITCAFIQIADAVSAPPTAPPTQPPTGVPKTCAEKCAYRCSRNPRN 61
           MK   +    ++S+++T +F  ++ A S+                C  KC+ RCS+  R 
Sbjct: 1   MKMPVVVQFFIISLLLTSSFYVLSSADSS---------------ACGGKCSVRCSKADRT 60

Query: 62  L--CKTLCISCCAKCNQCVPSGPFADKSECPCYRDIKTKKGLSKCP 106
              C   C  CC KCN CVPSG + +K ECPCYRD+K  KG SKCP
Sbjct: 61  HEECLEDCDICCQKCN-CVPSGTYGNKDECPCYRDMKNSKGGSKCP 90
[Close]
BLAST of Spo07806.1 vs. TAIR (Arabidopsis)
Match: AT2G39540.1 (Gibberellin-regulated family protein)

HSP 1 Score: 67.8 bits (164), Expect = 4.600e-12
Identity = 40/103 (38.83%), Postives = 53/103 (51.46%), Query Frame = 1 

		  

Query: 4   KISLTTLVLVSIVITCAFIQIADAVSAPPTAPPTQPPTGVPKTCAEKCAYRCSR-NPRNL 63
           K+ +    ++S+++T +F  ++ A S+                C  KC  RCS+      
Sbjct: 2   KLVVVQFFIISLLLTSSFSVLSSADSS----------------CGGKCNVRCSKAGQHEE 61

Query: 64  CKTLCISCCAKCNQCVPSGPFADKSECPCYRDIKTKKGLSKCP 106
           C   C  CC KCN CVPSG F  K ECPCYRD+K  KG SKCP
Sbjct: 62  CLKYCNICCQKCN-CVPSGTFGHKDECPCYRDMKNSKGGSKCP 87
[Close]
BLAST of Spo07806.1 vs. TAIR (Arabidopsis)
Match: AT3G02885.1 (GAST1 protein homolog 5)

HSP 1 Score: 66.6 bits (161), Expect = 1.000e-11
Identity = 30/63 (47.62%), Postives = 38/63 (60.32%), Query Frame = 1 

		  

Query: 44  PKTCAEKCAYRCSRNP-RNLCKTLCISCCAKCNQCVPSGPFADKSECPCYRDIKTKKGLS 103
           P+ C  KC++RCS    +  C   C+ CC KC  CVP G F +K  CPCY + KTK+G  
Sbjct: 36  PQQCNSKCSFRCSATSHKKPCMFFCLKCCKKC-LCVPPGTFGNKQTCPCYNNWKTKEGRP 95

Query: 104 KCP 106
           KCP
Sbjct: 96  KCP 97
[Close]
BLAST of Spo07806.1 vs. TAIR (Arabidopsis)
Match: AT2G14900.1 (Gibberellin-regulated family protein)

HSP 1 Score: 63.2 bits (152), Expect = 1.100e-10
Identity = 43/108 (39.81%), Postives = 58/108 (53.70%), Query Frame = 1 

		  

Query: 4   KISLTTLVLVSIVI---TCAFIQIADAVSAPPTAPPTQPPTG--VPKTCAEKCAYRCSR- 63
           KI ++ LVL S+++   + A   I+DA  +   AP  Q   G  + K C +KC  RC   
Sbjct: 2   KIIVSILVLASLLLISSSLASATISDAFGSGAVAPAPQSKDGPALEKWCGQKCEGRCKEA 61

Query: 64  NPRNLCKTLCISCCAKCNQCVPSGPFADKSECPCYRDIKTKKGLSKCP 106
             ++ C   C  CC  C QCVPSG + +K EC CYRD  + KG  KCP
Sbjct: 62  GMKDRCLKYCGICCKDC-QCVPSGTYGNKHECACYRDKLSSKGTPKCP 108
The following BLAST results are available for this feature:
BLAST of Spo07806.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902240262|gb|KNA25943.1|6.6e-53100.hypothetical protein SOVF_0015... [more]
gi|731347878|ref|XP_010685206.1|9.9e-3365.3PREDICTED: peamaclein-like [Be... [more]
gi|870852845|gb|KMT04726.1|2.4e-2661.5hypothetical protein BVRB_7g16... [more]
gi|629088540|gb|KCW54793.1|6.7e-1344.6hypothetical protein EUGRSUZ_I... [more]
gi|976925029|gb|KVI08947.1|1.9e-1243.1Gibberellin regulated protein ... [more]
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BLAST of Spo07806.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9S2K8_SPIOL4.6e-53100.Uncharacterized protein OS=Spi... [more]
A0A0J8BUA3_BETVU6.9e-3365.3Uncharacterized protein OS=Bet... [more]
A0A0J8ENZ8_BETVU1.6e-2661.5Uncharacterized protein OS=Bet... [more]
A0A059ALR5_EUCGR4.7e-1344.6Uncharacterized protein OS=Euc... [more]
A0A103YH22_CYNCS1.4e-1243.1Gibberellin regulated protein ... [more]
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BLAST of Spo07806.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
GASAA_ARATH3.9e-1339.8Gibberellin-regulated protein ... [more]
GAST1_SOLLC4.8e-1149.2Protein GAST1 OS=Solanum lycop... [more]
SNAK1_SOLTU4.8e-1142.7Snakin-1 OS=Solanum tuberosum ... [more]
GASA8_ARATH8.2e-1138.8Gibberellin-regulated protein ... [more]
PMLN_PRUPE1.4e-1051.6Peamaclein OS=Prunus persica P... [more]
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BLAST of Spo07806.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT5G59845.12.2e-1439.8Gibberellin-regulated family p... [more]
AT1G10588.13.5e-1238.6Gibberellin-regulated family p... [more]
AT2G39540.14.6e-1238.8Gibberellin-regulated family p... [more]
AT3G02885.11.0e-1147.6GAST1 protein homolog 5[more]
AT2G14900.11.1e-1039.8Gibberellin-regulated family p... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003854Gibberellin regulated proteinPFAMPF02704GASAcoord: 47..105
score: 2.8
NoneNo IPR availablePANTHERPTHR23201EXTENSIN, PROLINE-RICH PROTEINcoord: 1..105
score: 2.4

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006007 glucose catabolic process
biological_process GO:0006662 glycerol ether metabolic process
biological_process GO:0006399 tRNA metabolic process
biological_process GO:0006364 rRNA processing
biological_process GO:0045036 protein targeting to chloroplast
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0042793 plastid transcription
biological_process GO:0009867 jasmonic acid mediated signaling pathway
biological_process GO:0034051 negative regulation of plant-type hypersensitive response
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0009658 chloroplast organization
biological_process GO:0045454 cell redox homeostasis
biological_process GO:0009231 riboflavin biosynthetic process
cellular_component GO:0009536 plastid
cellular_component GO:0005739 mitochondrion
cellular_component GO:0009349 riboflavin synthase complex
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0009507 chloroplast
cellular_component GO:0009295 nucleoid
cellular_component GO:0009579 thylakoid
molecular_function GO:0016740 transferase activity
molecular_function GO:0000906 6,7-dimethyl-8-ribityllumazine synthase activity
molecular_function GO:0009055 electron transfer activity
molecular_function GO:0005515 protein binding
molecular_function GO:0015035 protein disulfide oxidoreductase activity
molecular_function GO:0047134 protein-disulfide reductase activity
RNA-Seq Expression