Spo07750 (gene)

Overview
NameSpo07750
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionPRA1 family protein B3 (AtPRA1.B3) (Prenylated Rab acceptor 2)
Locationchr1 : 46270743 .. 46272145 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTTCACCGCCCCTTGCCGGTGACTCCGCCGCCGCAATGACCTCCCAACCATGGCCAGAATTCTTTGACATCCGTTCCCTCTCCCTCCCAGTTTCCCTCTCCGACGCCACAACTCGGCTCAACTCAAACCTAAATCACTACCGAGTCAACTACATCAACGTCTTCCTTATCATCCTCTTTCTTACCCTCGCTTTACGTCCACTCTCTCTCCTCCTTGTCTTCGCCGCCGCTCTCGGATGGTACTTCCTCTACTTCGCCTCCCGCACTTCGCCTCTCGAAATCCTAGGATTCGTCGTCGACGATCGAATCGTCGTCAGCGTGCTCTCTGTAATTACGATTGTAGCCTTCGTTTTTGCTCACGCGTGGATGAATTTGCTGGTGTCGTTTGTAATTTCTGCGGTAGTTGTTGGTTTGCACGGCGTTCTTAGGGTTCCGATTGGAGATCAGGATCCTTACAGTGGTCTTCTTGATGCTGAATCTGGAGGTTATAGTGAGTTCTAATTGATTTAGGTTTTAAATTATTGTTGATTTTGTGATTAATGAATCGAATTGAAAATCAAATTGTTAGATTTTTCATATGCTTGATTTGATTTATTTAAGCATGAGTTTTGATTGTATTTTGACAAGAGATTGTTCTAATTGCAATAGCATTTGGTCTCATTGTTGCTAGGGTGGGGTTACTAATTTGGGTTGTTTGTTGTAACAAAAGATTTGGACAAATTTTGTACTATACTTTTGCTATCAAATTTGGTTCAATTGCCGGATTTTGGTCTTTTGCAGCTCAATTTGTTTTTATTGGAATTTGATTGATCTTCAAATGAATGCATCAATCTTCAAGATTATCCTAACCTTGATGCATTTGAGTTATAAAAATTTCCATTGAAAGGGTAATTTGATCATGTTTCTAGTCGAATGGCGCTCTTGACTACTGAATTGGTTATAGAACAAAAACTGTCCTAATTGAGGCACTATTGCTGACAGTCTGTGAGTGTGTGACCAAAAACGCCTACTACTCGATTTGTTATCACAAGAAACTAGAATACTTTGACATGAATATTATAACTTCATTCTTGTATAAGTTTTATTAGAATATGAAATGGAATGTTCAAGTACATACAAGTACACAACATTCAAACTCAGATTCATTTCTTCATGTAGTATTAGTATATCTCATAACATAAGGAATCAGACAACGACCGAAATACATACATATTAGTTAATATATTAGTCCCTTGGACAAAACTCTTACAAGTTACATCCATTCAACACAAGTGTGAGTATATATATCTTTATCCCCTATTTCAGCCATCTTCAATCCAATCCTCCGAGCTAGCAACGCCGAGTTGATGTTTGGAAGCCTCTTCAGCAATTTCGAATGCTGGTTCGCCAAAAAGCAGTAA

mRNA sequence

ATGTCTTCACCGCCCCTTGCCGGTGACTCCGCCGCCGCAATGACCTCCCAACCATGGCCAGAATTCTTTGACATCCGTTCCCTCTCCCTCCCAGTTTCCCTCTCCGACGCCACAACTCGGCTCAACTCAAACCTAAATCACTACCGAGTCAACTACATCAACGTCTTCCTTATCATCCTCTTTCTTACCCTCGCTTTACGTCCACTCTCTCTCCTCCTTGTCTTCGCCGCCGCTCTCGGATGGTACTTCCTCTACTTCGCCTCCCGCACTTCGCCTCTCGAAATCCTAGGATTCGTCGTCGACGATCGAATCGTCGTCAGCGTGCTCTCTGTAATTACGATTGTAGCCTTCGTTTTTGCTCACGCGTGGATGAATTTGCTGGTGTCGTTTGTAATTTCTGCGGTAGTTGTTGGTTTGCACGGCGTTCTTAGGGTTCCGATTGGAGATCAGGATCCTTACAGTGGTCTTCTTGATGCTGAATCTGGAGGTTATACCATCTTCAATCCAATCCTCCGAGCTAGCAACGCCGAGTTGATGTTTGGAAGCCTCTTCAGCAATTTCGAATGCTGGTTCGCCAAAAAGCAGTAA

Coding sequence (CDS)

ATGTCTTCACCGCCCCTTGCCGGTGACTCCGCCGCCGCAATGACCTCCCAACCATGGCCAGAATTCTTTGACATCCGTTCCCTCTCCCTCCCAGTTTCCCTCTCCGACGCCACAACTCGGCTCAACTCAAACCTAAATCACTACCGAGTCAACTACATCAACGTCTTCCTTATCATCCTCTTTCTTACCCTCGCTTTACGTCCACTCTCTCTCCTCCTTGTCTTCGCCGCCGCTCTCGGATGGTACTTCCTCTACTTCGCCTCCCGCACTTCGCCTCTCGAAATCCTAGGATTCGTCGTCGACGATCGAATCGTCGTCAGCGTGCTCTCTGTAATTACGATTGTAGCCTTCGTTTTTGCTCACGCGTGGATGAATTTGCTGGTGTCGTTTGTAATTTCTGCGGTAGTTGTTGGTTTGCACGGCGTTCTTAGGGTTCCGATTGGAGATCAGGATCCTTACAGTGGTCTTCTTGATGCTGAATCTGGAGGTTATACCATCTTCAATCCAATCCTCCGAGCTAGCAACGCCGAGTTGATGTTTGGAAGCCTCTTCAGCAATTTCGAATGCTGGTTCGCCAAAAAGCAGTAA

Protein sequence

MSSPPLAGDSAAAMTSQPWPEFFDIRSLSLPVSLSDATTRLNSNLNHYRVNYINVFLIILFLTLALRPLSLLLVFAAALGWYFLYFASRTSPLEILGFVVDDRIVVSVLSVITIVAFVFAHAWMNLLVSFVISAVVVGLHGVLRVPIGDQDPYSGLLDAESGGYTIFNPILRASNAELMFGSLFSNFECWFAKKQ
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo07750.1Spo07750.1mRNA


Homology
[Close]
BLAST of Spo07750.1 vs. NCBI nr
Match: gi|902194677|gb|KNA12613.1| (hypothetical protein SOVF_123930 [Spinacia oleracea])

HSP 1 Score: 308.5 bits (789), Expect = 8.200e-81
Identity = 165/167 (98.80%), Postives = 166/167 (99.40%), Query Frame = 1 

		  

Query: 1   MSSPPLAGDSAAAMTSQPWPEFFDIRSLSLPVSLSDATTRLNSNLNHYRVNYINVFLIIL 60
           MSSPPLAGDSAAAMTSQPWPEFFDIRSLSLPVSLSDATTRLNSNLNHYRVNYINVFLIIL
Sbjct: 1   MSSPPLAGDSAAAMTSQPWPEFFDIRSLSLPVSLSDATTRLNSNLNHYRVNYINVFLIIL 60

Query: 61  FLTLALRPLSLLLVFAAALGWYFLYFASRTSPLEILGFVVDDRIVVSVLSVITIVAFVFA 120
           FLTLALRPLSLLLVFAAALGWYFLYFASRTSPLEILGFVVDDRIVVSVLSVITIVAFVFA
Sbjct: 61  FLTLALRPLSLLLVFAAALGWYFLYFASRTSPLEILGFVVDDRIVVSVLSVITIVAFVFA 120

Query: 121 HAWMNLLVSFVISAVVVGLHGVLRVPIGDQDPYSGLLDAESGGYTIF 168
           HAWMNLLVSFVISAVVVGLHGVLRVPIGDQDPYSGLLDAESGGY+ F
Sbjct: 121 HAWMNLLVSFVISAVVVGLHGVLRVPIGDQDPYSGLLDAESGGYSEF 167
[Close]
BLAST of Spo07750.1 vs. NCBI nr
Match: gi|731347835|ref|XP_010685185.1| (PREDICTED: PRA1 family protein D-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 216.9 bits (551), Expect = 3.200e-53
Identity = 110/159 (69.18%), Postives = 135/159 (84.91%), Query Frame = 1 

		  

Query: 10  SAAAMTSQPWPEFFDIRSLSLPVSLSDATTRLNSNLNHYRVNYINVFLIILFLTLALRPL 69
           S+AA T++PWPEFFD  SLSLPVSLSDATTRLN NL H+RVNYIN+FLII FLTL+LRPL
Sbjct: 8   SSAATTTRPWPEFFDTNSLSLPVSLSDATTRLNINLTHFRVNYINIFLIIFFLTLSLRPL 67

Query: 70  SLLLVFAAALGWYFLYFASRTSPLEILGFVVDDRIVVSVLSVITIVAFVFAHAWMNLLVS 129
           SLL++F  +L WYF+YF+ ++SP+EILGFV DDRI+++VL VIT++A  FAHAW+NLL++
Sbjct: 68  SLLIIFVTSLAWYFIYFSPQSSPIEILGFVNDDRIIIAVLGVITVLALFFAHAWLNLLLA 127

Query: 130 FVISAVVVGLHGVLR-VPIGDQDPYSGLLDAESGGYTIF 168
            VI+AV+V LH V R    GDQDPY GLLDAESGGY+ F
Sbjct: 128 IVIAAVLVSLHAVFRGSSYGDQDPYGGLLDAESGGYSEF 166
[Close]
BLAST of Spo07750.1 vs. NCBI nr
Match: gi|698461970|ref|XP_009781890.1| (PREDICTED: PRA1 family protein D [Nicotiana sylvestris])

HSP 1 Score: 137.5 bits (345), Expect = 2.500e-29
Identity = 79/168 (47.02%), Postives = 106/168 (63.10%), Query Frame = 1 

		  

Query: 1   MSSPPLAGDSAAAMTSQPWPEFFDIRSLSLPVSLSDATTRLNSNLNHYRVNYINVFLIIL 60
           MSSPP    + AA+T +PWP F D  +LSLP+S SDAT R+N NL ++  NY+ + L IL
Sbjct: 1   MSSPPPDAGTIAAVTVRPWPLFIDTAALSLPISFSDATYRINKNLRYFAGNYVLIILFIL 60

Query: 61  FLTLALRPLSLLLVFAAALGWYFLYFASRTSPLEILGFVVDDRIVVSVLSVITIVAFVFA 120
            +TL +RP+ L+L      GW +LYF SR  PLE+ GF VDDR V+  LS++T+VA + A
Sbjct: 61  LITLIIRPILLVLFLIIFAGWIYLYF-SRNEPLELFGFDVDDRFVLGFLSLVTVVALLVA 120

Query: 121 HAWMNLLVSFVISAVVVGLHGVLRVPIG-DQDPYSGLL-DAESGGYTI 167
             W N+ VS     V++ +HG LR P   D  PY  LL ++  G YTI
Sbjct: 121 KIWTNVFVSIGFGIVILCVHGALRAPEDQDDSPYGALLSESPRGEYTI 167
[Close]
BLAST of Spo07750.1 vs. NCBI nr
Match: gi|460404439|ref|XP_004247690.1| (PREDICTED: PRA1 family protein D [Solanum lycopersicum])

HSP 1 Score: 136.3 bits (342), Expect = 5.500e-29
Identity = 77/168 (45.83%), Postives = 111/168 (66.07%), Query Frame = 1 

		  

Query: 1   MSSPPLAGDSAAAMTSQPWPEFFDIRSLSLPVSLSDATTRLNSNLNHYRVNYINVFLIIL 60
           MSSPP    + AA+T +PWP F DI +LSLP+S+SDAT R+N NL ++  NY  + L IL
Sbjct: 1   MSSPPPDAGTVAAVTVRPWPLFIDIAALSLPISVSDATYRINKNLRYFAGNYALIVLSIL 60

Query: 61  FLTLALRPLSLLLVFAAALGWYFLYFASRTSPLEILGFVVDDRIVVSVLSVITIVAFVFA 120
            ++L +RP+ L+L     +GW +LYF SR  PLE+ GF VDD++V+  L+++T+VA + A
Sbjct: 61  LISLIVRPILLVLFLIIFVGWIYLYF-SRNEPLELFGFDVDDKLVLGFLTLVTLVALLVA 120

Query: 121 HAWMNLLVSFVISAVVVGLHGVLRVPIGDQD-PYSGLL-DAESGGYTI 167
             WMN+ VS     V++ +HG LR P   +D PY  LL ++  G Y+I
Sbjct: 121 KIWMNIFVSIGFGIVIMCVHGSLRAPEDQEDSPYGALLSESPRGNYSI 167
[Close]
BLAST of Spo07750.1 vs. NCBI nr
Match: gi|565393046|ref|XP_006362196.1| (PREDICTED: PRA1 family protein D-like [Solanum tuberosum])

HSP 1 Score: 131.3 bits (329), Expect = 1.800e-27
Identity = 73/168 (43.45%), Postives = 108/168 (64.29%), Query Frame = 1 

		  

Query: 1   MSSPPLAGDSAAAMTSQPWPEFFDIRSLSLPVSLSDATTRLNSNLNHYRVNYINVFLIIL 60
           MSSPP    + A +T +PWP F D  +LSLP+S+SDAT R+N NL ++  NY  + L IL
Sbjct: 1   MSSPPPDAGTVAVVTVRPWPLFIDTAALSLPISVSDATYRINKNLRYFAGNYALIILSIL 60

Query: 61  FLTLALRPLSLLLVFAAALGWYFLYFASRTSPLEILGFVVDDRIVVSVLSVITIVAFVFA 120
            ++L ++P+ L+L     +GW +LYF SR  PLE+ GF +DD+ V+  L+++T+VA + A
Sbjct: 61  LISLIVQPILLVLFLIIFVGWIYLYF-SRNEPLELFGFDIDDKFVLGFLTLVTLVALLVA 120

Query: 121 HAWMNLLVSFVISAVVVGLHGVLRVPIGDQD-PYSGLL-DAESGGYTI 167
             WMN+ VS     V++ +HG LR P   +D PY  LL ++  G Y+I
Sbjct: 121 KIWMNIFVSIGFGIVIMCVHGALRAPEDQEDSPYGALLSESPRGNYSI 167
[Close]
BLAST of Spo07750.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R115_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_123930 PE=4 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 5.700e-81
Identity = 165/167 (98.80%), Postives = 166/167 (99.40%), Query Frame = 1 

		  

Query: 1   MSSPPLAGDSAAAMTSQPWPEFFDIRSLSLPVSLSDATTRLNSNLNHYRVNYINVFLIIL 60
           MSSPPLAGDSAAAMTSQPWPEFFDIRSLSLPVSLSDATTRLNSNLNHYRVNYINVFLIIL
Sbjct: 1   MSSPPLAGDSAAAMTSQPWPEFFDIRSLSLPVSLSDATTRLNSNLNHYRVNYINVFLIIL 60

Query: 61  FLTLALRPLSLLLVFAAALGWYFLYFASRTSPLEILGFVVDDRIVVSVLSVITIVAFVFA 120
           FLTLALRPLSLLLVFAAALGWYFLYFASRTSPLEILGFVVDDRIVVSVLSVITIVAFVFA
Sbjct: 61  FLTLALRPLSLLLVFAAALGWYFLYFASRTSPLEILGFVVDDRIVVSVLSVITIVAFVFA 120

Query: 121 HAWMNLLVSFVISAVVVGLHGVLRVPIGDQDPYSGLLDAESGGYTIF 168
           HAWMNLLVSFVISAVVVGLHGVLRVPIGDQDPYSGLLDAESGGY+ F
Sbjct: 121 HAWMNLLVSFVISAVVVGLHGVLRVPIGDQDPYSGLLDAESGGYSEF 167
[Close]
BLAST of Spo07750.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BT33_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g168870 PE=4 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 2.200e-53
Identity = 110/159 (69.18%), Postives = 135/159 (84.91%), Query Frame = 1 

		  

Query: 10  SAAAMTSQPWPEFFDIRSLSLPVSLSDATTRLNSNLNHYRVNYINVFLIILFLTLALRPL 69
           S+AA T++PWPEFFD  SLSLPVSLSDATTRLN NL H+RVNYIN+FLII FLTL+LRPL
Sbjct: 8   SSAATTTRPWPEFFDTNSLSLPVSLSDATTRLNINLTHFRVNYINIFLIIFFLTLSLRPL 67

Query: 70  SLLLVFAAALGWYFLYFASRTSPLEILGFVVDDRIVVSVLSVITIVAFVFAHAWMNLLVS 129
           SLL++F  +L WYF+YF+ ++SP+EILGFV DDRI+++VL VIT++A  FAHAW+NLL++
Sbjct: 68  SLLIIFVTSLAWYFIYFSPQSSPIEILGFVNDDRIIIAVLGVITVLALFFAHAWLNLLLA 127

Query: 130 FVISAVVVGLHGVLR-VPIGDQDPYSGLLDAESGGYTIF 168
            VI+AV+V LH V R    GDQDPY GLLDAESGGY+ F
Sbjct: 128 IVIAAVLVSLHAVFRGSSYGDQDPYGGLLDAESGGYSEF 166
[Close]
BLAST of Spo07750.1 vs. UniProtKB/TrEMBL
Match: K4CVV8_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 3.900e-29
Identity = 77/168 (45.83%), Postives = 111/168 (66.07%), Query Frame = 1 

		  

Query: 1   MSSPPLAGDSAAAMTSQPWPEFFDIRSLSLPVSLSDATTRLNSNLNHYRVNYINVFLIIL 60
           MSSPP    + AA+T +PWP F DI +LSLP+S+SDAT R+N NL ++  NY  + L IL
Sbjct: 1   MSSPPPDAGTVAAVTVRPWPLFIDIAALSLPISVSDATYRINKNLRYFAGNYALIVLSIL 60

Query: 61  FLTLALRPLSLLLVFAAALGWYFLYFASRTSPLEILGFVVDDRIVVSVLSVITIVAFVFA 120
            ++L +RP+ L+L     +GW +LYF SR  PLE+ GF VDD++V+  L+++T+VA + A
Sbjct: 61  LISLIVRPILLVLFLIIFVGWIYLYF-SRNEPLELFGFDVDDKLVLGFLTLVTLVALLVA 120

Query: 121 HAWMNLLVSFVISAVVVGLHGVLRVPIGDQD-PYSGLL-DAESGGYTI 167
             WMN+ VS     V++ +HG LR P   +D PY  LL ++  G Y+I
Sbjct: 121 KIWMNIFVSIGFGIVIMCVHGSLRAPEDQEDSPYGALLSESPRGNYSI 167
[Close]
BLAST of Spo07750.1 vs. UniProtKB/TrEMBL
Match: A0A0V0H823_SOLCH (Putative PRA1 family protein D-like OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 2.500e-28
Identity = 75/168 (44.64%), Postives = 110/168 (65.48%), Query Frame = 1 

		  

Query: 1   MSSPPLAGDSAAAMTSQPWPEFFDIRSLSLPVSLSDATTRLNSNLNHYRVNYINVFLIIL 60
           MSSPP    + AA+T +PWP F DI +LSLP+S+SDAT R+N NL ++  NY  + L IL
Sbjct: 1   MSSPPPDAGTVAAVTVRPWPLFIDIAALSLPISVSDATYRINKNLRYFAGNYALIILSIL 60

Query: 61  FLTLALRPLSLLLVFAAALGWYFLYFASRTSPLEILGFVVDDRIVVSVLSVITIVAFVFA 120
            ++L +RP+ L+L     +GW +LYF SR  PLE+ GF +DD+ V+  L+++T+VA + A
Sbjct: 61  LISLIVRPILLVLFLIIFVGWIYLYF-SRNEPLELFGFDIDDKFVLGFLTLVTLVALLVA 120

Query: 121 HAWMNLLVSFVISAVVVGLHGVLRVPIGDQD-PYSGLL-DAESGGYTI 167
             WM++ VS     V++ +HG LR P   +D PY  LL ++  G Y+I
Sbjct: 121 KIWMSIFVSIGFGIVIMCVHGSLRAPEDQEDSPYGALLSESPRGNYSI 167
[Close]
BLAST of Spo07750.1 vs. UniProtKB/TrEMBL
Match: M1A6C9_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400006110 PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.200e-27
Identity = 73/168 (43.45%), Postives = 108/168 (64.29%), Query Frame = 1 

		  

Query: 1   MSSPPLAGDSAAAMTSQPWPEFFDIRSLSLPVSLSDATTRLNSNLNHYRVNYINVFLIIL 60
           MSSPP    + A +T +PWP F D  +LSLP+S+SDAT R+N NL ++  NY  + L IL
Sbjct: 1   MSSPPPDAGTVAVVTVRPWPLFIDTAALSLPISVSDATYRINKNLRYFAGNYALIILSIL 60

Query: 61  FLTLALRPLSLLLVFAAALGWYFLYFASRTSPLEILGFVVDDRIVVSVLSVITIVAFVFA 120
            ++L ++P+ L+L     +GW +LYF SR  PLE+ GF +DD+ V+  L+++T+VA + A
Sbjct: 61  LISLIVQPILLVLFLIIFVGWIYLYF-SRNEPLELFGFDIDDKFVLGFLTLVTLVALLVA 120

Query: 121 HAWMNLLVSFVISAVVVGLHGVLRVPIGDQD-PYSGLL-DAESGGYTI 167
             WMN+ VS     V++ +HG LR P   +D PY  LL ++  G Y+I
Sbjct: 121 KIWMNIFVSIGFGIVIMCVHGALRAPEDQEDSPYGALLSESPRGNYSI 167
[Close]
BLAST of Spo07750.1 vs. ExPASy Swiss-Prot
Match: PRA1D_ARATH (PRA1 family protein D OS=Arabidopsis thaliana GN=PRA1D PE=1 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 7.300e-21
Identity = 60/153 (39.22%), Postives = 87/153 (56.86%), Query Frame = 1 

		  

Query: 16  SQPWPEFFDIRSLSLPVSLSDATTRLNSNLNHYRVNYINVFLIILFLTLALRPLSLLLVF 75
           ++PW +F D+ + S P S++DATTR+  NL H+R+NY  +  I+L LTL  RP+++L   
Sbjct: 20  ARPWGDFLDLSAFSFPSSIADATTRVTQNLTHFRINYSIILSILLGLTLITRPIAILAFI 79

Query: 76  AAALGWYFLYFASRTSPLEILGFVVDDRIVVSVLSVITIVAFVFAHAWMNLLVSFVISAV 135
           A  L W+FLYFA R  PL I GF +DD IV  +L  ++I + V    W+  L +     +
Sbjct: 80  AVGLAWFFLYFA-REEPLTIFGFTIDDGIVAVLLIGLSIGSLVTTGVWLRALTTVGFGVL 139

Query: 136 VVGLHGVLR-----VPIGDQDPYSGLLDAESGG 164
           V+ LH  LR     V    + PY  +L    GG
Sbjct: 140 VLILHAALRGTDDLVSDDLESPYGPMLSTSGGG 171
[Close]
BLAST of Spo07750.1 vs. ExPASy Swiss-Prot
Match: PR1F2_ARATH (PRA1 family protein F2 OS=Arabidopsis thaliana GN=PRA1F2 PE=1 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 1.300e-17
Identity = 53/130 (40.77%), Postives = 79/130 (60.77%), Query Frame = 1 

		  

Query: 15  TSQPWPEFFDIRSLSLPVSLSDATTRLNSNLNHYRVNYINVFLIILFLTLALRPLSLLLV 74
           T +PW   FD  S++LP    DA +R+ +NL ++R NY    L ILFL+L   P SL+++
Sbjct: 35  TRRPWKSMFDFESMTLPHGFFDAISRIKTNLGYFRANYAIGVLFILFLSLLYHPTSLIVL 94

Query: 75  FAAALGWYFLYFASRTSPLEILGFVVDDRIVVSVLSVITIVAFVFAHAWMNLLVSFVISA 134
               + W FLYF  R  PL + G+ +DDR V+  LSV+T+V  +  HA  N+L S + +A
Sbjct: 95  SILVVFWIFLYFL-RDEPLVVFGYQIDDRTVLIGLSVLTVVMLLLTHATSNILGSLLTAA 154

Query: 135 VVVGLHGVLR 145
           V+V +H  +R
Sbjct: 155 VLVLIHAAVR 163
[Close]
BLAST of Spo07750.1 vs. ExPASy Swiss-Prot
Match: PR1F3_ARATH (PRA1 family protein F3 OS=Arabidopsis thaliana GN=PRA1F3 PE=1 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 2.900e-17
Identity = 53/134 (39.55%), Postives = 82/134 (61.19%), Query Frame = 1 

		  

Query: 11  AAAMTSQPWPEFFDIRSLSLPVSLSDATTRLNSNLNHYRVNYINVFLIILFLTLALRPLS 70
           A   T + W   FD  S+ LP  +SDA TR+ +NL ++R+NY  V LI++F +L   P S
Sbjct: 31  AGLATRRAWRVMFDFHSMGLPHGVSDAFTRIKTNLAYFRMNYAIVVLIVIFFSLIWHPTS 90

Query: 71  LLLVFAAALGWYFLYFASRTSPLEILGFVVDDRIVVSVLSVITIVAFVFAHAWMNLLVSF 130
           L++     + W FLYF  R  P+++  F +DDR V+ VLSV+T+V  +  +A  N++ + 
Sbjct: 91  LIVFTVLVVVWIFLYFL-RDEPIKLFRFQIDDRTVLIVLSVLTVVLLLLTNATFNIVGAL 150

Query: 131 VISAVVVGLHGVLR 145
           V  AV+V +H V+R
Sbjct: 151 VTGAVLVLIHSVVR 163
[Close]
BLAST of Spo07750.1 vs. ExPASy Swiss-Prot
Match: PRA1E_ARATH (PRA1 family protein E OS=Arabidopsis thaliana GN=PRA1E PE=1 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 9.200e-16
Identity = 49/131 (37.40%), Postives = 76/131 (58.02%), Query Frame = 1 

		  

Query: 15  TSQPWPEFFDIRSLSLPVSLSDATTRLNSNLNHYRVNYINVFLIILFLTLALRPLSLLLV 74
           T +PW E  D+ +LSLP    +A   L  N++++R NY    L I+FL L   P+S++  
Sbjct: 46  TLRPWREILDLSALSLPRGYDEAMAHLKHNISYFRGNYALAVLAIVFLGLIYHPMSMIAF 105

Query: 75  FAAALGWYFLYFA-SRTSPLEILGFVVDDRIVVSVLSVITIVAFVFAHAWMNLLVSFVIS 134
               +GW  LYF+      + I G  VDD+IV+ +LS++T++A V+     N+LVS +I 
Sbjct: 106 IVVFIGWILLYFSRDANDSIVISGKEVDDKIVLVLLSLVTVLALVYTDVGENVLVSLIIG 165

Query: 135 AVVVGLHGVLR 145
            ++VG HG  R
Sbjct: 166 LLIVGAHGAFR 176
[Close]
BLAST of Spo07750.1 vs. ExPASy Swiss-Prot
Match: PR1B3_ARATH (PRA1 family protein B3 OS=Arabidopsis thaliana GN=PRA1B3 PE=1 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 7.800e-15
Identity = 57/155 (36.77%), Postives = 83/155 (53.55%), Query Frame = 1 

		  

Query: 17  QPWPEFFDIRSLSLPVSLSDATTRLNSNLNHYRVNYINVFLIILFLTLALRPLSLLLVFA 76
           +PW E  D  ++S P SL+DA +R+  NL +++VNY+ +  ++L L+L   P SLL++  
Sbjct: 48  RPWLELVDRSAISRPESLTDAYSRIRRNLPYFKVNYVTIVSLVLALSLLSHPFSLLVLLC 107

Query: 77  AALGWYFLY-FASRTSPLEILGFVVDDRIVVSVLSVITIVAFVFAHAWMNLLVSFVISAV 136
               W FLY F     PL +LG    DR  + VL ++TIV          L  + +I   
Sbjct: 108 LFCAWIFLYLFRPSDQPLVVLGRTFSDRETLGVLVILTIVVVFLTSVGSLLTSALMIGFG 167

Query: 137 VVGLHGVLRVP----IGDQDP-YSGLLDAESGGYT 166
           +V LHG  RVP    + DQ+P  +GLL   SG  T
Sbjct: 168 IVCLHGAFRVPEDLFLDDQEPANTGLLSFLSGAAT 202
[Close]
BLAST of Spo07750.1 vs. TAIR (Arabidopsis)
Match: AT1G04260.1 (CAMV movement protein interacting protein 7)

HSP 1 Score: 102.1 bits (253), Expect = 4.100e-22
Identity = 60/153 (39.22%), Postives = 87/153 (56.86%), Query Frame = 1 

		  

Query: 16  SQPWPEFFDIRSLSLPVSLSDATTRLNSNLNHYRVNYINVFLIILFLTLALRPLSLLLVF 75
           ++PW +F D+ + S P S++DATTR+  NL H+R+NY  +  I+L LTL  RP+++L   
Sbjct: 20  ARPWGDFLDLSAFSFPSSIADATTRVTQNLTHFRINYSIILSILLGLTLITRPIAILAFI 79

Query: 76  AAALGWYFLYFASRTSPLEILGFVVDDRIVVSVLSVITIVAFVFAHAWMNLLVSFVISAV 135
           A  L W+FLYFA R  PL I GF +DD IV  +L  ++I + V    W+  L +     +
Sbjct: 80  AVGLAWFFLYFA-REEPLTIFGFTIDDGIVAVLLIGLSIGSLVTTGVWLRALTTVGFGVL 139

Query: 136 VVGLHGVLR-----VPIGDQDPYSGLLDAESGG 164
           V+ LH  LR     V    + PY  +L    GG
Sbjct: 140 VLILHAALRGTDDLVSDDLESPYGPMLSTSGGG 171
[Close]
BLAST of Spo07750.1 vs. TAIR (Arabidopsis)
Match: AT1G55190.1 (PRA1 (Prenylated rab acceptor) family protein)

HSP 1 Score: 91.3 bits (225), Expect = 7.200e-19
Identity = 53/130 (40.77%), Postives = 79/130 (60.77%), Query Frame = 1 

		  

Query: 15  TSQPWPEFFDIRSLSLPVSLSDATTRLNSNLNHYRVNYINVFLIILFLTLALRPLSLLLV 74
           T +PW   FD  S++LP    DA +R+ +NL ++R NY    L ILFL+L   P SL+++
Sbjct: 35  TRRPWKSMFDFESMTLPHGFFDAISRIKTNLGYFRANYAIGVLFILFLSLLYHPTSLIVL 94

Query: 75  FAAALGWYFLYFASRTSPLEILGFVVDDRIVVSVLSVITIVAFVFAHAWMNLLVSFVISA 134
               + W FLYF  R  PL + G+ +DDR V+  LSV+T+V  +  HA  N+L S + +A
Sbjct: 95  SILVVFWIFLYFL-RDEPLVVFGYQIDDRTVLIGLSVLTVVMLLLTHATSNILGSLLTAA 154

Query: 135 VVVGLHGVLR 145
           V+V +H  +R
Sbjct: 155 VLVLIHAAVR 163
[Close]
BLAST of Spo07750.1 vs. TAIR (Arabidopsis)
Match: AT3G13720.1 (PRA1 (Prenylated rab acceptor) family protein)

HSP 1 Score: 90.1 bits (222), Expect = 1.600e-18
Identity = 53/134 (39.55%), Postives = 82/134 (61.19%), Query Frame = 1 

		  

Query: 11  AAAMTSQPWPEFFDIRSLSLPVSLSDATTRLNSNLNHYRVNYINVFLIILFLTLALRPLS 70
           A   T + W   FD  S+ LP  +SDA TR+ +NL ++R+NY  V LI++F +L   P S
Sbjct: 31  AGLATRRAWRVMFDFHSMGLPHGVSDAFTRIKTNLAYFRMNYAIVVLIVIFFSLIWHPTS 90

Query: 71  LLLVFAAALGWYFLYFASRTSPLEILGFVVDDRIVVSVLSVITIVAFVFAHAWMNLLVSF 130
           L++     + W FLYF  R  P+++  F +DDR V+ VLSV+T+V  +  +A  N++ + 
Sbjct: 91  LIVFTVLVVVWIFLYFL-RDEPIKLFRFQIDDRTVLIVLSVLTVVLLLLTNATFNIVGAL 150

Query: 131 VISAVVVGLHGVLR 145
           V  AV+V +H V+R
Sbjct: 151 VTGAVLVLIHSVVR 163
[Close]
BLAST of Spo07750.1 vs. TAIR (Arabidopsis)
Match: AT1G08770.1 (prenylated RAB acceptor 1.E)

HSP 1 Score: 85.1 bits (209), Expect = 5.200e-17
Identity = 49/131 (37.40%), Postives = 76/131 (58.02%), Query Frame = 1 

		  

Query: 15  TSQPWPEFFDIRSLSLPVSLSDATTRLNSNLNHYRVNYINVFLIILFLTLALRPLSLLLV 74
           T +PW E  D+ +LSLP    +A   L  N++++R NY    L I+FL L   P+S++  
Sbjct: 46  TLRPWREILDLSALSLPRGYDEAMAHLKHNISYFRGNYALAVLAIVFLGLIYHPMSMIAF 105

Query: 75  FAAALGWYFLYFA-SRTSPLEILGFVVDDRIVVSVLSVITIVAFVFAHAWMNLLVSFVIS 134
               +GW  LYF+      + I G  VDD+IV+ +LS++T++A V+     N+LVS +I 
Sbjct: 106 IVVFIGWILLYFSRDANDSIVISGKEVDDKIVLVLLSLVTVLALVYTDVGENVLVSLIIG 165

Query: 135 AVVVGLHGVLR 145
            ++VG HG  R
Sbjct: 166 LLIVGAHGAFR 176
[Close]
BLAST of Spo07750.1 vs. TAIR (Arabidopsis)
Match: AT5G05380.1 (prenylated RAB acceptor 1.B3)

HSP 1 Score: 82.0 bits (201), Expect = 4.400e-16
Identity = 57/155 (36.77%), Postives = 83/155 (53.55%), Query Frame = 1 

		  

Query: 17  QPWPEFFDIRSLSLPVSLSDATTRLNSNLNHYRVNYINVFLIILFLTLALRPLSLLLVFA 76
           +PW E  D  ++S P SL+DA +R+  NL +++VNY+ +  ++L L+L   P SLL++  
Sbjct: 48  RPWLELVDRSAISRPESLTDAYSRIRRNLPYFKVNYVTIVSLVLALSLLSHPFSLLVLLC 107

Query: 77  AALGWYFLY-FASRTSPLEILGFVVDDRIVVSVLSVITIVAFVFAHAWMNLLVSFVISAV 136
               W FLY F     PL +LG    DR  + VL ++TIV          L  + +I   
Sbjct: 108 LFCAWIFLYLFRPSDQPLVVLGRTFSDRETLGVLVILTIVVVFLTSVGSLLTSALMIGFG 167

Query: 137 VVGLHGVLRVP----IGDQDP-YSGLLDAESGGYT 166
           +V LHG  RVP    + DQ+P  +GLL   SG  T
Sbjct: 168 IVCLHGAFRVPEDLFLDDQEPANTGLLSFLSGAAT 202
The following BLAST results are available for this feature:
BLAST of Spo07750.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902194677|gb|KNA12613.1|8.2e-8198.8hypothetical protein SOVF_1239... [more]
gi|731347835|ref|XP_010685185.1|3.2e-5369.1PREDICTED: PRA1 family protein... [more]
gi|698461970|ref|XP_009781890.1|2.5e-2947.0PREDICTED: PRA1 family protein... [more]
gi|460404439|ref|XP_004247690.1|5.5e-2945.8PREDICTED: PRA1 family protein... [more]
gi|565393046|ref|XP_006362196.1|1.8e-2743.4PREDICTED: PRA1 family protein... [more]
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BLAST of Spo07750.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9R115_SPIOL5.7e-8198.8Uncharacterized protein OS=Spi... [more]
A0A0J8BT33_BETVU2.2e-5369.1Uncharacterized protein OS=Bet... [more]
K4CVV8_SOLLC3.9e-2945.8Uncharacterized protein OS=Sol... [more]
A0A0V0H823_SOLCH2.5e-2844.6Putative PRA1 family protein D... [more]
M1A6C9_SOLTU1.2e-2743.4Uncharacterized protein OS=Sol... [more]
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BLAST of Spo07750.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
PRA1D_ARATH7.3e-2139.2PRA1 family protein D OS=Arabi... [more]
PR1F2_ARATH1.3e-1740.7PRA1 family protein F2 OS=Arab... [more]
PR1F3_ARATH2.9e-1739.5PRA1 family protein F3 OS=Arab... [more]
PRA1E_ARATH9.2e-1637.4PRA1 family protein E OS=Arabi... [more]
PR1B3_ARATH7.8e-1536.7PRA1 family protein B3 OS=Arab... [more]
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BLAST of Spo07750.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT1G04260.14.1e-2239.2CAMV movement protein interact... [more]
AT1G55190.17.2e-1940.7PRA1 (Prenylated rab acceptor)... [more]
AT3G13720.11.6e-1839.5PRA1 (Prenylated rab acceptor)... [more]
AT1G08770.15.2e-1737.4prenylated RAB acceptor 1.E[more]
AT5G05380.14.4e-1636.7prenylated RAB acceptor 1.B3[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004895Prenylated rab acceptor PRA1PFAMPF03208PRA1coord: 14..146
score: 1.4
NoneNo IPR availablePANTHERPTHR19317PRENYLATED RAB ACCEPTOR 1-RELATEDcoord: 10..151
score: 1.5

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0051701 interaction with host
biological_process GO:0046907 intracellular transport
biological_process GO:0033036 macromolecule localization
biological_process GO:0071702 organic substance transport
biological_process GO:0016192 vesicle-mediated transport
biological_process GO:0016032 viral process
cellular_component GO:0005783 endoplasmic reticulum
cellular_component GO:0016020 membrane
molecular_function GO:0005515 protein binding
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo003800.70Barchart | Table
Spo200470.68Barchart | Table
Spo090330.67Barchart | Table
Spo267120.65Barchart | Table