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Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTCGTGTCATGTCGTATCAATTTATTGTTCGGTCACGTTGTTTTATCACTCGTGTGAGAGACGGTCTGCTCTAACTCTAGCCCGAAAGGCTCGCTTTTGACCAGAAACCCAGTCTTCCCCGCCCCGCCTCACCTCTAATTCTGTCCGGTACTCAAAGAAGATAATTCAATTGACAATGGAAGCCCTTGGATATCTCCCTCTCTGTACTCCCAAACTTTCACCCTCAAATTGTAATAAAAAATGCTGCACAAATTATTCTGGAGCAGCACCAAATTACAAATTCAACGGCCCTTGTTCTGGGAAGTTGATCCCAATTCGCAAAACGATGGTATGTGAAAACCTTGGATTTTTCCAGTTAAATCCCTCCCAAATTCATGGATTTTCATTTTTGTTTTATTTTTATGTCAAACTTTTTGAAATGGGTGTCATTTTTTACAGAATTGGAAAGTACCCAGAATGCAAGTAGTGGAAGAAGAGTATGAATTGAAGCAAATGAAAGATATGGCAGCTGCTAGAAAAAGATGGGAAGCTTTGGTATAAATTAATTCCCTTCATAATTGAAAATTAATGCTATTTTTATTTCAATTTCTGGTTAATTTTTAGTTGGTTTGCTTAATTATACATCGTATATGATATTTTGAACTTGTTTTAACTAGGATTGAAATAGCTATGAGTAATTTAGGGTTTCTATAACTGAAAAGGGTAAGAGTTTTAGGGAATTAGCAAATCGTTATTTTTTTGTAGAACTGTTGTACTATGTGATTGAAATTATGGATTCCTAAATGGTAGGATGATATCGAATTATGTTGTGGATAATGGGATTGATTTGTTACATCTAGCGTTACATAGGTGTAACCGTGTAAGCTATTCAAATAAAAGAAAATGAACAAAGGAAATAGCTTCCTCAGTTTTTCAGATTTTGAAGTAGTTGCTTTATGGTGGCGGGGTGGATTGCCAAGTTTAAGTAATGTTTAAGCTATACGGCTACAAATTGCGATTTCAAGTCCAGTAATGTTTGTATTTGTAGTAGTTTCTTTGTAGATTGGCTATTATTGACTACCTCGTACTGTCATAGTGCTGTTGATATGGATGCACCACATTTTGTTTGAAATTGTGATAAGCATCTGTAACTCTATAAGCACACAATTTCTTGTCATGGTCGCTTGTGGTTTAAAATCCTTGTTGTGAGTGAGAATCTCATATTTGTGTCTCAGGCTTTCGAACTCTTTTGCATAGGTGAGGGAGGGAAAAGTCAAACCTTTGACTCCAAGGGAGGCTGGGTATGCAATCCAACTGTCCGGCAAGACTCTGCTTGATGTTCGACCTGCATCAGAGCGCAATAAGGTGAGTACTTGATCTATACCTATCTTCTTTGCTTGAGAATACATTTATGCTTCAGCTACTTTTTTGGACGCTATAGCTATGTCATCATTAATTATGGTTTTATTTACTCTGCTTTTGGAGGTTCTGAATTCTGTTTTTCAAAGCATCAATTGTGATTGCATCTACTGTTCTGATTTGTTTGGACTTTATGCATTGAAGTTACATACTTATATTTTGAGTGACATAATATATGCTATGTGGCTGCGTAAATGTTCTGATCCTTTTCTGTTTAGTAGTTAACAAACTTCGTACTTAACACTCCTTATTCACTTTCTGTTTTGTGACTTGTGTCTGGTACACCGTACACCATTAAGTCCATTCCATATAAATGCTTTATAAGTATCACCTAAAAGACTAAAACTTACTCAATATCTACATCTTTTAATGAAAACAACATTTACTTTATGGAAGCTATGATTCTATATCATCTCTCACTAATCCATGAATAAAATGTGTATTTTTGTGATGCAGGCATGGGTTAAGGGTTCAGACTGGATACCCATTTTTGATGTTGATGACAGATTGGATGCTGGAACGCTCTCAAAAAAGGCAACAAATTTCGTGATGGGTACTTCTTGATTCCTATCATCCTTTTCCTGGCATGTTATAAAGTTTATTATTATAAAGTTAAAGGCAAAGTTTCTACATCGTTACATCAAATAGATAAATAATACAACCCATTCAAGTGTTATCCAAAATAAGATTAGCAAGAAAACTTTGTACAATATTTGTAAATTGTAACTAGTAGACTGCTTAAAAAGAAATGGCTTTGTTGTATAAAGGATTTAGATAAGCCCCTTCATGTCTTGAAATCTTATTGAATTTATGTAGGAGGATGGTGGAGTGGTGTGCCTACACTTTCCTATAACGGGTATGCTGCTAATCCACAATCCTTTCCAAGTTGGAGTAATATACAAGTTACTCTTTGATAAATGATGGATTTTTGCGCAGCTGGTTCTTATCCAAAGTCGAGGAAGAGTTCCCAAAGGATACAGATCTTATTGTAGCGTGTCAGAAGGGATTAAGGTGATATACTTATTATCAGATTCTTATATTTCTGAGATTTAGGCTAGCCAACTAATTTATCATGTGAAGTTTCCTTTTAGTTTTGACTGTATTCTAGTACTAGATGGAGTACTAATAGTATTGTAACCCTCTGCATGGGATAAAGTTCAAGCTATTTGCAGAATATTCTGGGATATGGATTGCGTGGGTGTGTCCATTTCCGATGGAGCCAATGATTCATTTGTTCTTTTGGCCATGGGATGTATTGCACTAAATCAAAATGACTCTTAAAACCTCTTCGCTTCCTTTCCATGAAGTAGAAGATGGTCGTCCCGTTGTCGTCCCGTTAACGCTTCTGGGTCAATTGGAAACAACCTCAATGCAATTGCAATAGCAGGGGTAAGGTTGCGTACGTTCGATCCCCCCTTACCCCGCTTTTTGCGGGAGCCTCTTTGAGGCAATGGGGTAATGATAATGAATGGATGGATTGCGTGGGTTCCCTACATTAATAGTATGATGTCTCAATTTTAGCAGCATTACTGCAACTTATTGCGTTTACCCTTTATTTTTCTTCCCTGCATCATCTGTGACTTGTTGCGTTTACCCTTTATTTTTCTTGAGAAAGTCTCCAGAAAGAACTGGATTTTAACCTCTAAATTCTAGTGCACTTGGATATTTTAAAAATTTAGAAAAATGTGGTGTGCTTTGAGCCTCTGAATCAATTGAAGTAATGAACTGAATGAATTTTGTGGTCAGTGATGTTTTTTGCACATTCATCTGTGTGTTCCATGGAAAGGGGAAATAGAATGGGAACAAGAATGATGCTAATGTACGATATGTCAGTATATCATAAACAAGATATGCACAAGAGTGACAATGTTGAGGATTGTAGATTTATTGCAAAATAAATGAAACAAAGTTACAAGCAAGCATAATTTTGTCCCCATCAACTGGACCTCTAACTTGGGATGACTGAATCGAGTGGTAGTGCCTCTTTAATATTTAACTTGCTAGGCTTTCCTATGATTTTGGACCTGCACGTTAGCTAATGCAAAAACAACCCTTTGAACACTCTGGTTATGGGAATTTTATGTTAATGTTAGATTCATCAGTATTTTCCATATTGTATTCCCTTAACACCTTTAGCGCATTTGACTGGTAGATCTTTAGCTGCTTGCGAGCAGCTTTGTAATGCCGGGTACAAAAATGTCTTCTGGGTTCAAGGAGGACTGGAAGCAGCAGAAGAAGAGGTATTTTCTTTAATTTGTATTGTCAAAATGTTCTGTTTTCTTGTGTCTTTTCTTTGAACGAAGGGAACTCGAGGTTCAACGCTGTGATGTACTCATACAGGATCTGCAGAGAGAAGGTTCACAGCCATTTAAATTTGCCGGAATTGGAGGTCTTTCTGAATTTCTTGGGTTAGTAGTCTGTTCAATAGAATTTCTGTCATCGATTTTGTGAATATGGATATCCCACCTCAATTTCTAGAACATTCTGTTTCTCACTCTCACATCTTCCGGCACTAAATCCCAACGGATTTCACTTTCAGTTGGACGGATCAGCAAAGAGCTGCAGCAGCTAAAGAAGGATGGCAATATCGATTAGTTTTCTCTGCGCGTATGGTATGATCCTAGGCAACAACTGCTTATCAAAATATGTATACGTCTCTTTTGGTTTTATATCACATGGTCATTCTCTGAATCGTATTGTAGGTCGGACTGTTTATTGCTGCGGATGCATTTTATCTTACTGCTCAGCAAGTTGTTCGTTACCTACAACAAGTACGATCGTAGTTAATGTCTGTAACTCTGTATGGCTGTATGCCATTGAAGATTGAAGTCTTTCACTTCACACATGTAGGAAAGAAATCATGTTTTGGTTTGTATTGATGTACGAACCCTGCCAAATCTATCTTTTCTTTGTGTATCTGAGTTTCATATGTTCATCAAAATTTTGTAGTGTGAAAGAATGTTATATGAATGTTTATATAGATTAATATACCATATACTTCAATGTTATTTTGCCTCCTTTCTGTTTGGTTTTGGAATTTGTTAGTTATTTGTCCAAAGAATGGTCAATTTGGCACCCAAATTTCGTGTCATGTCGTATCAATTTATTGTTCGGTCACGTTGTTTTATCACTCGTGTGAGAGACGGTCTGCTCTAACTCTAGCCCGAAAGGCTCGCTTTTGACCAGAAACCCAGTCTTCCCCGCCCCGCCTCACCTCTAATTCTGTCCGGTACTCAAAGAAGATAATTCAATTGACAATGGAAGCCCTTGGATATCTCCCTCTCTGTACTCCCAAACTTTCACCCTCAAATTGTAATAAAAAATGCTGCACAAATTATTCTGGAGCAGCACCAAATTACAAATTCAACGGCCCTTGTTCTGGGAAGTTGATCCCAATTCGCAAAACGATGAATTGGAAAGTACCCAGAATGCAAGTAGTGGAAGAAGAGTATGAATTGAAGCAAATGAAAGATATGGCAGCTGCTAGAAAAAGATGGGAAGCTTTGGTGAGGGAGGGAAAAGTCAAACCTTTGACTCCAAGGGAGGCTGGGTATGCAATCCAACTGTCCGGCAAGACTCTGCTTGATGTTCGACCTGCATCAGAGCGCAATAAGGCATGGGTTAAGGGTTCAGACTGGATACCCATTTTTGATGTTGATGACAGATTGGATGCTGGAACGCTCTCAAAAAAGGCAACAAATTTCGTGATGGGAGGATGGTGGAGTGGTGTGCCTACACTTTCCTATAACGGCTGGTTCTTATCCAAAGTCGAGGAAGAGTTCCCAAAGGATACAGATCTTATTGTAGCGTGTCAGAAGGGATTAAGATCTTTAGCTGCTTGCGAGCAGCTTTGTAATGCCGGGTACAAAAATGTCTTCTGGGTTCAAGGAGGACTGGAAGCAGCAGAAGAAGAGGATCTGCAGAGAGAAGGTTCACAGCCATTTAAATTTGCCGGAATTGGAGGTCTTTCTGAATTTCTTGGTTGGACGGATCAGCAAAGAGCTGCAGCAGCTAAAGAAGGATGGCAATATCGATTAGTTTTCTCTGCGCGTATGGTCGGACTGTTTATTGCTGCGGATGCATTTTATCTTACTGCTCAGCAAGTTGTTCGTTACCTACAACAAGTACGATCGTAGTTAATGTCTGTAACTCTGTATGGCTGTATGCCATTGAAGATTGAAGTCTTTCACTTCACACATGTAGGAAAGAAATCATGTTTTGGTTTGTATTGATGTACGAACCCTGCCAAATCTATCTTTTCTTTGTGTATCTGAGTTTCATATGTTCATCAAAATTTTGTAGTGTGAAAGAATGTTATATGAATGTTTATATAGATTAATATACCATATACTTCAATGTTATTTTGCCTCCTTTCTGTTTGGTTTTGGAATTTGTTAGTTATTTGTCCAAAGAATGGTCAATTTGGCACCCAAAT ATGGAAGCCCTTGGATATCTCCCTCTCTGTACTCCCAAACTTTCACCCTCAAATTGTAATAAAAAATGCTGCACAAATTATTCTGGAGCAGCACCAAATTACAAATTCAACGGCCCTTGTTCTGGGAAGTTGATCCCAATTCGCAAAACGATGAATTGGAAAGTACCCAGAATGCAAGTAGTGGAAGAAGAGTATGAATTGAAGCAAATGAAAGATATGGCAGCTGCTAGAAAAAGATGGGAAGCTTTGGTGAGGGAGGGAAAAGTCAAACCTTTGACTCCAAGGGAGGCTGGGTATGCAATCCAACTGTCCGGCAAGACTCTGCTTGATGTTCGACCTGCATCAGAGCGCAATAAGGCATGGGTTAAGGGTTCAGACTGGATACCCATTTTTGATGTTGATGACAGATTGGATGCTGGAACGCTCTCAAAAAAGGCAACAAATTTCGTGATGGGAGGATGGTGGAGTGGTGTGCCTACACTTTCCTATAACGGCTGGTTCTTATCCAAAGTCGAGGAAGAGTTCCCAAAGGATACAGATCTTATTGTAGCGTGTCAGAAGGGATTAAGATCTTTAGCTGCTTGCGAGCAGCTTTGTAATGCCGGGTACAAAAATGTCTTCTGGGTTCAAGGAGGACTGGAAGCAGCAGAAGAAGAGGATCTGCAGAGAGAAGGTTCACAGCCATTTAAATTTGCCGGAATTGGAGGTCTTTCTGAATTTCTTGGTTGGACGGATCAGCAAAGAGCTGCAGCAGCTAAAGAAGGATGGCAATATCGATTAGTTTTCTCTGCGCGTATGGTCGGACTGTTTATTGCTGCGGATGCATTTTATCTTACTGCTCAGCAAGTTGTTCGTTACCTACAACAAGTACGATCGTAG MEALGYLPLCTPKLSPSNCNKKCCTNYSGAAPNYKFNGPCSGKLIPIRKTMNWKVPRMQVVEEEYELKQMKDMAAARKRWEALVREGKVKPLTPREAGYAIQLSGKTLLDVRPASERNKAWVKGSDWIPIFDVDDRLDAGTLSKKATNFVMGGWWSGVPTLSYNGWFLSKVEEEFPKDTDLIVACQKGLRSLAACEQLCNAGYKNVFWVQGGLEAAEEEDLQREGSQPFKFAGIGGLSEFLGWTDQQRAAAAKEGWQYRLVFSARMVGLFIAADAFYLTAQQVVRYLQQVRS Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo07596.1 vs. NCBI nr
Match: gi|731368175|ref|XP_010695997.1| (PREDICTED: rhodanese-like domain-containing protein 11, chloroplastic isoform X1 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 507.3 bits (1305), Expect = 1.800e-140 Identity = 245/292 (83.90%), Postives = 263/292 (90.07%), Query Frame = 1
BLAST of Spo07596.1 vs. NCBI nr
Match: gi|902212442|gb|KNA16980.1| (hypothetical protein SOVF_084550 [Spinacia oleracea]) HSP 1 Score: 496.9 bits (1278), Expect = 2.400e-137 Identity = 242/242 (100.00%), Postives = 242/242 (100.00%), Query Frame = 1
BLAST of Spo07596.1 vs. NCBI nr
Match: gi|870844240|gb|KMS97273.1| (hypothetical protein BVRB_7g177180 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 440.7 bits (1132), Expect = 2.100e-120 Identity = 213/235 (90.64%), Postives = 225/235 (95.74%), Query Frame = 1
BLAST of Spo07596.1 vs. NCBI nr
Match: gi|747051798|ref|XP_011071992.1| (PREDICTED: rhodanese-like domain-containing protein 11, chloroplastic isoform X1 [Sesamum indicum]) HSP 1 Score: 410.6 bits (1054), Expect = 2.300e-111 Identity = 198/236 (83.90%), Postives = 217/236 (91.95%), Query Frame = 1
BLAST of Spo07596.1 vs. NCBI nr
Match: gi|225456849|ref|XP_002276527.1| (PREDICTED: rhodanese-like domain-containing protein 11, chloroplastic isoform X1 [Vitis vinifera]) HSP 1 Score: 404.1 bits (1037), Expect = 2.100e-109 Identity = 206/292 (70.55%), Postives = 230/292 (78.77%), Query Frame = 1
BLAST of Spo07596.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RBY2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_084550 PE=4 SV=1) HSP 1 Score: 496.9 bits (1278), Expect = 1.700e-137 Identity = 242/242 (100.00%), Postives = 242/242 (100.00%), Query Frame = 1
BLAST of Spo07596.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BB88_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g177180 PE=4 SV=1) HSP 1 Score: 440.7 bits (1132), Expect = 1.400e-120 Identity = 213/235 (90.64%), Postives = 225/235 (95.74%), Query Frame = 1
BLAST of Spo07596.1 vs. UniProtKB/TrEMBL
Match: D7SHF7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_17s0000g09620 PE=4 SV=1) HSP 1 Score: 404.1 bits (1037), Expect = 1.500e-109 Identity = 206/292 (70.55%), Postives = 230/292 (78.77%), Query Frame = 1
BLAST of Spo07596.1 vs. UniProtKB/TrEMBL
Match: A0A022Q0Y7_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a011339mg PE=4 SV=1) HSP 1 Score: 402.1 bits (1032), Expect = 5.700e-109 Identity = 193/244 (79.10%), Postives = 215/244 (88.11%), Query Frame = 1
BLAST of Spo07596.1 vs. UniProtKB/TrEMBL
Match: A0A0S3RG75_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.02G233500 PE=4 SV=1) HSP 1 Score: 398.7 bits (1023), Expect = 6.200e-108 Identity = 196/292 (67.12%), Postives = 236/292 (80.82%), Query Frame = 1
BLAST of Spo07596.1 vs. ExPASy Swiss-Prot
Match: STR11_ARATH (Rhodanese-like domain-containing protein 11, chloroplastic OS=Arabidopsis thaliana GN=STR11 PE=2 SV=1) HSP 1 Score: 369.0 bits (946), Expect = 4.800e-101 Identity = 185/292 (63.36%), Postives = 226/292 (77.40%), Query Frame = 1
BLAST of Spo07596.1 vs. ExPASy Swiss-Prot
Match: STR10_ARATH (Rhodanese-like domain-containing protein 10 OS=Arabidopsis thaliana GN=STR10 PE=2 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 2.800e-24 Identity = 66/161 (40.99%), Postives = 91/161 (56.52%), Query Frame = 1
BLAST of Spo07596.1 vs. ExPASy Swiss-Prot
Match: STR9_ARATH (Rhodanese-like domain-containing protein 9, chloroplastic OS=Arabidopsis thaliana GN=STR9 PE=2 SV=1) HSP 1 Score: 95.1 bits (235), Expect = 1.300e-18 Identity = 51/155 (32.90%), Postives = 82/155 (52.90%), Query Frame = 1
BLAST of Spo07596.1 vs. TAIR (Arabidopsis)
Match: AT4G24750.1 (Rhodanese/Cell cycle control phosphatase superfamily protein) HSP 1 Score: 369.0 bits (946), Expect = 2.700e-102 Identity = 185/292 (63.36%), Postives = 226/292 (77.40%), Query Frame = 1
BLAST of Spo07596.1 vs. TAIR (Arabidopsis)
Match: AT3G08920.1 (Rhodanese/Cell cycle control phosphatase superfamily protein) HSP 1 Score: 114.0 bits (284), Expect = 1.600e-25 Identity = 66/161 (40.99%), Postives = 91/161 (56.52%), Query Frame = 1
BLAST of Spo07596.1 vs. TAIR (Arabidopsis)
Match: AT2G42220.1 (Rhodanese/Cell cycle control phosphatase superfamily protein) HSP 1 Score: 95.1 bits (235), Expect = 7.500e-20 Identity = 51/155 (32.90%), Postives = 82/155 (52.90%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo07596.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo07596.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo07596.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 3
BLAST of Spo07596.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 3
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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