Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCGCCTCAACCCCAACGCCAACCCCGCAAACAAAGGATTGACAAACAAAAAACCGAAACACAATAGAGTGAGAAAGGAGTACGAAGCAATGAGCTTAGCACTCATCCAAAGTTACTCCTCCGCCGAAGAAGACGAAAGAGAAGAATCTAATCATCACTACGACAATTTCTCTGACGACGACAATGACTCCGGCACCGGCTCCGACAACTCCGCCGCCGTTTCACGCTTTCCTTCCACCTACAACCCCGTCGTCGCCCCTAAATCTTCTCAAGACTCCGCTCTTCCCTCCGCCCTAGATGCATTCTCCGAAGTACTTACTACTCCAACCTTTTCCTCTCTCCTCAAATTCTTTCAGTTTTTCATTGAATTACTGCATTCTTTGAGCTGGATTTTTTTGTCAATTTTAATTTTGAGTGATAAGTTTGATTACCCACTTCTTATTTTTGCTTGATTTCCCTTTGTTGTTGGGTTTTTGGAGATTTCAGGGCCGCCTCAGTTTCTTAATAATTGCGTAGAAGACCAGAATGTGGGAAGAGATATTATTGTTCATCGTGTTCGCAGGAACAGCAGAAACAAGAAAGATCTGCCTACTGGTATAATGCCTTCGTCATTTTTTAATTAATCATTTTTGTTGTTTACAGTTAATTAGACCTAAAAAGAAAGGGCATATGGATTCAAAATTCGTATTCTATTTGGGTTATCCGTCATCTGTTTTAATTTCAATTTTGTTAGGTTTTCTTTGGGGGTTATTGTTAGGATTAAGCAATTGAAGATAATTCACTCAGAAAGATAGTTTATCTTTTGTTGTGGAAAAATAGGATTTATATACAAGCTTAATGAGATCAAGACGTATAGGTTGGAGCTTTCTAGAAGGGATGATATCACATACTTTTGGCCTTTGGGTTATATGACTTTGAGAAATTTTACCTGGTGTTAACCTGTATATAACTTTAAGCATATTAGGTATCCCTAATTTCTGAGTTTGAATTGAAGGGGGGATTGGGTTTGGCGAGATGGGAAGATTGTAGCTTGAACAGAGAGGTATAAGATAGCAACTTGACTTAGAAATAGCTTGATATGGAGCTCAAAGTTGAATAAAAGGTCAAAACACTTGAGATGTCAAATTGATTGGGTGTGTCAAGAATCCAAATCTTGGAGAGACATCGGTAGTAACTAGGGGTTGGGAAAGTCTCTTGGTTGGTTGAGCAAGATGAGATTTGGGATTTTCTGTTAAGCAAGAGTTTAAGGTGGGTTTCATCGGGTTTCGTTTCAAACTGAACAGATGTGGTATAGGGGTCAACTTTCCAATTCCTTTTTTGAGTTTCTAAAACGGCGGCTTTTTTGGAGACATTTTCAATAATTAGGCTCTCTACAGTCCACCTGTAGACATGTTCTGTATGTAAAGATAAAGTGTTACTTAGCACGACCTTGGCTTGTTAGGAGATGTGACGAACTTGAATTTAGCTTAGATTCAATCCACTTTGTGTTGACTGTTGAGTTTTGCTGCATTGAGCTTGTGAACTGCTAGGTTGCCTCTTTCTAGTTTGCTTTGAAGAAGTATTAGTATATCCAGAAAACAATAAAAGGTTGAGACTTGATGAAAGTACGAACTTCCTGGAGAAGATAGTGACATTAAAAGAAAAATAGTGGGAAAACAAGAAAACTCCGATGGCGGGATACTTTATCAAATGTAGAACATCATGAAACGTAAAAATAAAGGTAACAGATGAAAGCCCTTAAAATTTTGTTTGCACAGGATCTGGTAGCATTCTAAACACTTGCTTCAGAATTTTGTGAGAAAGTGCTTTCTGATATACGAGTACTCGTTTAAAATGGTGGGGAAAAGTTATCTCATGCTTTCTTGAAATAGTTCTTTGGAACAAATATTTTCCCAAGAAGAATAATGCTTCTGAATTAAATGGCCTTGATTGATGAGCATGTCAAAGTACAATCCTAGAGCATAAAAAGTAACCTGCTTTGAAAAAATTGCCTTTAACATTGAGGTCAGGTTTGTGATTAGATGTTAAGATGTCTTACCCCACAAAGATAATATGACAATCTGGGAACAGAAATCTACAATCCAATGAGCTCAAGTCCATGTGGTGTGCCTGTGCGTAGAATTCTACTATGTATAGTACTTACAGGGAGTTCTCTGTTGTTTTGCAGTTGATTTTTGCCAAGCTGTGATTTCTTTTGTGGTAAATTGAATGATATGATGTTATTGTTCCTGTAGGTGCTGTGGTGGAAGCCAAGCCCCATTTAGTTGGCATTCATGAACGAGTAAGGAGTGATATTGAGGGTAGTGTTCCCTCTACTGGTTCTACACAGCCTCAGAAAACTCCTCCGGTAATGAAAACTGCTGATGGCTCTCAACCAAGGTATACTCACATCTTATTAATGATGCACATACAAATATCTTCGGTAATTGAATCAAATCTTTCACTAGTGTTATCTTCTGTCAGCATGTTGTTTATTATTATATGTTAGCAATCTCGCATTTTACAGTTCTTTGCAGAGAGAAAATTTTGCATAATTGATATCATGATATATGTTGGCATGTTAGCAACCTCCTGTGTGCTCGATTACATGAAGTCAAATAGAGTTGTTGGCCATATACATTATTCATCATGTACCGTGAATTACTTTGGACAATGATGTTAATTTTAACTCTACTAAAACTCCTATCATTTGTTACAATGACTTTTGATATTCATTTGTGGAGCATGTATGATTTTCTTCCAATTAAATCCGCTATATAAATCTTGTTTCAGTATGTGCTTGCTATGCGGGATACCCAAAACCTACACGAGTGCTCTTGGGATGGTATGTCCCGTATGTCCTTCAGATGACTCCAAAAAGAAGGGATCTACTGTTAAAGATAAAGAGAAAATCAAGAGAATGAGAGGCCAGTCTTCTCATGCTAGTTGGAAAAGTGAGACAGAGATGCACCTCAGGCAGACCTTTGATTAACAGAGTTATTGGAACCACCACCTGTCTTTTTATTTTTTTTCCAGGATTAGTGTTGAAAAGGTGTAAGATTAGTTAAATTGATAATTGTCATTCTGAAAGCAATTGCAACTGTGTTTAGTCTTGTATCATGTGTGTGATATTCGTTGTCATATTTCATTAGAATCATGGATAAATCAAAAGTTCGACTTGTATGCGTAAGTTGAATTATGAACTTTGATCTTTTAACCGTCTCACTAGAATAAGAGTGACGGATTCTGAGAAAGTTGTAAGTTTTTGCAATATGAATTAAATGCCAACATTTTAATATTTTACTCGAGTCGTG CCGCCTCAACCCCAACGCCAACCCCGCAAACAAAGGATTGACAAACAAAAAACCGAAACACAATAGAGTGAGAAAGGAGTACGAAGCAATGAGCTTAGCACTCATCCAAAGTTACTCCTCCGCCGAAGAAGACGAAAGAGAAGAATCTAATCATCACTACGACAATTTCTCTGACGACGACAATGACTCCGGCACCGGCTCCGACAACTCCGCCGCCGTTTCACGCTTTCCTTCCACCTACAACCCCGTCGTCGCCCCTAAATCTTCTCAAGACTCCGCTCTTCCCTCCGCCCTAGATGCATTCTCCGAAATTTCAGGGCCGCCTCAGTTTCTTAATAATTGCGTAGAAGACCAGAATGTGGGAAGAGATATTATTGTTCATCGTGTTCGCAGGAACAGCAGAAACAAGAAAGATCTGCCTACTGGTGCTGTGGTGGAAGCCAAGCCCCATTTAGTTGGCATTCATGAACGAGTAAGGAGTGATATTGAGGGTAGTGTTCCCTCTACTGGTTCTACACAGCCTCAGAAAACTCCTCCGGTAATGAAAACTGCTGATGGCTCTCAACCAAGTATGTGCTTGCTATGCGGGATACCCAAAACCTACACGAGTGCTCTTGGGATGGTATGTCCCGTATGTCCTTCAGATGACTCCAAAAAGAAGGGATCTACTGTTAAAGATAAAGAGAAAATCAAGAGAATGAGAGGCCAGTCTTCTCATGCTAGTTGGAAAAGTGAGACAGAGATGCACCTCAGGCAGACCTTTGATTAACAGAGTTATTGGAACCACCACCTGTCTTTTTATTTTTTTTCCAGGATTAGTGTTGAAAAGGTGTAAGATTAGTTAAATTGATAATTGTCATTCTGAAAGCAATTGCAACTGTGTTTAGTCTTGTATCATGTGTGTGATATTCGTTGTCATATTTCATTAGAATCATGGATAAATCAAAAGTTCGACTTGTATGCGTAAGTTGAATTATGAACTTTGATCTTTTAACCGTCTCACTAGAATAAGAGTGACGGATTCTGAGAAAGTTGTAAGTTTTTGCAATATGAATTAAATGCCAACATTTTAATATTTTACTCGAGTCGTG ATGAGCTTAGCACTCATCCAAAGTTACTCCTCCGCCGAAGAAGACGAAAGAGAAGAATCTAATCATCACTACGACAATTTCTCTGACGACGACAATGACTCCGGCACCGGCTCCGACAACTCCGCCGCCGTTTCACGCTTTCCTTCCACCTACAACCCCGTCGTCGCCCCTAAATCTTCTCAAGACTCCGCTCTTCCCTCCGCCCTAGATGCATTCTCCGAAATTTCAGGGCCGCCTCAGTTTCTTAATAATTGCGTAGAAGACCAGAATGTGGGAAGAGATATTATTGTTCATCGTGTTCGCAGGAACAGCAGAAACAAGAAAGATCTGCCTACTGGTGCTGTGGTGGAAGCCAAGCCCCATTTAGTTGGCATTCATGAACGAGTAAGGAGTGATATTGAGGGTAGTGTTCCCTCTACTGGTTCTACACAGCCTCAGAAAACTCCTCCGGTAATGAAAACTGCTGATGGCTCTCAACCAAGTATGTGCTTGCTATGCGGGATACCCAAAACCTACACGAGTGCTCTTGGGATGGTATGTCCCGTATGTCCTTCAGATGACTCCAAAAAGAAGGGATCTACTGTTAAAGATAAAGAGAAAATCAAGAGAATGAGAGGCCAGTCTTCTCATGCTAGTTGGAAAAGTGAGACAGAGATGCACCTCAGGCAGACCTTTGATTAA MSLALIQSYSSAEEDEREESNHHYDNFSDDDNDSGTGSDNSAAVSRFPSTYNPVVAPKSSQDSALPSALDAFSEISGPPQFLNNCVEDQNVGRDIIVHRVRRNSRNKKDLPTGAVVEAKPHLVGIHERVRSDIEGSVPSTGSTQPQKTPPVMKTADGSQPSMCLLCGIPKTYTSALGMVCPVCPSDDSKKKGSTVKDKEKIKRMRGQSSHASWKSETEMHLRQTFD Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo07315.1 vs. NCBI nr
Match: gi|902150286|gb|KNA05395.1| (hypothetical protein SOVF_190740 [Spinacia oleracea]) HSP 1 Score: 443.0 bits (1138), Expect = 3.200e-121 Identity = 226/226 (100.00%), Postives = 226/226 (100.00%), Query Frame = 1
BLAST of Spo07315.1 vs. NCBI nr
Match: gi|731357935|ref|XP_010690475.1| (PREDICTED: uncharacterized protein LOC104904005 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 335.5 bits (859), Expect = 7.200e-89 Identity = 174/227 (76.65%), Postives = 195/227 (85.90%), Query Frame = 1
BLAST of Spo07315.1 vs. NCBI nr
Match: gi|802711215|ref|XP_012084604.1| (PREDICTED: uncharacterized protein LOC105643972 [Jatropha curcas]) HSP 1 Score: 224.6 bits (571), Expect = 1.800e-55 Identity = 145/249 (58.23%), Postives = 162/249 (65.06%), Query Frame = 1
BLAST of Spo07315.1 vs. NCBI nr
Match: gi|694419889|ref|XP_009337879.1| (PREDICTED: uncharacterized protein LOC103930291 [Pyrus x bretschneideri]) HSP 1 Score: 218.8 bits (556), Expect = 9.800e-54 Identity = 136/250 (54.40%), Postives = 158/250 (63.20%), Query Frame = 1
BLAST of Spo07315.1 vs. NCBI nr
Match: gi|356524842|ref|XP_003531037.1| (PREDICTED: uncharacterized protein LOC100780521 isoform X1 [Glycine max]) HSP 1 Score: 217.6 bits (553), Expect = 2.200e-53 Identity = 140/251 (55.78%), Postives = 161/251 (64.14%), Query Frame = 1
BLAST of Spo07315.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QDQ7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_190740 PE=4 SV=1) HSP 1 Score: 443.0 bits (1138), Expect = 2.200e-121 Identity = 226/226 (100.00%), Postives = 226/226 (100.00%), Query Frame = 1
BLAST of Spo07315.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BN86_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g214850 PE=4 SV=1) HSP 1 Score: 335.5 bits (859), Expect = 5.000e-89 Identity = 174/227 (76.65%), Postives = 195/227 (85.90%), Query Frame = 1
BLAST of Spo07315.1 vs. UniProtKB/TrEMBL
Match: A0A067JTS5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20190 PE=4 SV=1) HSP 1 Score: 224.6 bits (571), Expect = 1.300e-55 Identity = 145/249 (58.23%), Postives = 162/249 (65.06%), Query Frame = 1
BLAST of Spo07315.1 vs. UniProtKB/TrEMBL
Match: I1KR39_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_08G073500 PE=4 SV=1) HSP 1 Score: 217.6 bits (553), Expect = 1.500e-53 Identity = 140/251 (55.78%), Postives = 161/251 (64.14%), Query Frame = 1
BLAST of Spo07315.1 vs. UniProtKB/TrEMBL
Match: A0A0D2S335_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G141700 PE=4 SV=1) HSP 1 Score: 217.2 bits (552), Expect = 2.000e-53 Identity = 134/249 (53.82%), Postives = 162/249 (65.06%), Query Frame = 1
BLAST of Spo07315.1 vs. TAIR (Arabidopsis)
Match: AT5G64160.1 (unknown protein) HSP 1 Score: 194.5 bits (493), Expect = 7.000e-50 Identity = 125/235 (53.19%), Postives = 154/235 (65.53%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo07315.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo07315.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo07315.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 0
BLAST of Spo07315.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 1
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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