Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ACCAATTTATGGAAAAAACGGAGCGTGTGCACGCCACAATTACAATTGCTCCCTTCCTTAAGTTTAAGCTCGTGGAAAGCACAAGCACACTGATCATCCCCCTTTTTCTTTTATGGGTTCAGTTCATCTTCCCATAAGCAGACAACAACAAACACCTATACAATTTTATGTATTTTCTCACTTATTTCGCTAAATCCTGCTGTAATCAAATACCCAAATATCATAAACCCTAATTTGGTTTAGTTTGAAGCAGAATAATTAGGAATTTGTCACTACTAAATTATGGATCAAACTCTTGATCGATCCCAAAGCTCACAGCTTGATTCCAGGTTTGTTACTTTCTATTTCTTACAGTTTTTATATAAAGATTGATGCTTTTTATTTGCTTATCTGCGGAATTTGAGATTTGGGTCACAATTTGTTTGTATTTCTTTTTGTTATCTTGATTTTGATGAATCTGAAAATAGGGTTGTTTTGATTGTTATGACTTAGTTTAAAGAACTGCATTGAAGTTGTGGAAACTGTGGTTTAGTTGAGCTATAAAGTGAAGAAGTATGGAAATTTTTGGAGAAAGTGTAAAGTTGTTGAAGAACTGTAATAGTGAGTGGCATGATCATATGTTGTTCTATCATATATTGAGTGATTGACACATTTTATCATTCATAAGGTTGAAAACATTTGCAGGAGAGGAGGAAGTTGTCATTTAGGCTATGTTCTGTTCGATTTATTTTGACTTATTTCAGACAAAATAAGTTCAGTTAAGTTCAGATATTGGCCTATTGGGATTAGGGGGGATGAGAGGGAGATTGAATTCCCAATCCAACCAAAGTGAAACTTATGGCTATATTTGATAGGGTGTAAAATGTTTTCATGGAAAACGATTTTTGCTTTTTCAATCGTTTTAAGTTGTTTGGGTTAGCAAGGGATGGAAAACCATTTTCCATAACTCCCTCAAAGTTGAAAAAATATTTTCCATTTGAGAAGAAGGGAAACCACTTTTCCCTTTCCTCCTTAGCTCCTTAGTTCCATCTTCCTTCTTCCCATCAATCTTCACGCATATTCTCTCATTTTTTTTCTCTATTAATTTTCTTGTAAGGAACCAAACAAAGGAAAGTTAGTTTGGAATCGTATTTTTCCTTGAAAAAAAAATTTCCATGGAAAATCATTTTTCTCTGGAAACGTTTTGCGCCAAACTAAAGGGGGCCTTAGATTAGCAAAGAAAAGAAATGGTTTATGTTCTTCATTTTGCCTTTTTTTTTCATAGACAAAGGCCAGAAGCAGAAGTGAATGACCCCGTCGCTGTACGAAAGGTTCAGAAGGCAGATCGGGAAAAATTGAGGAGGGATCGGTTAAATGACCACTTTCAAGAGCTTGGAAGTGCTATAGGTAAACCATCTATATATCCTTTTGTGCACACTTCTCTAATTCCTTGCGCGCTGCATGTGTTGCCTCCAGCCATCATCTTTATGGTATTAGATAGTCTGTTTCTTGCACAACTTGTGGATTTTGTCTGATGATGATTGATAAGTCTGCGTGATACAGTAAAATATCATATGACTAAGAAGTGCATACTAGATTTTCAAATAGCTGAAAGCGAATTAAAACTCTGCGATTGATGAAAAGTAGGGTTTGTTGAAGTAGCAGTTTCATGTAGATGTTTGAGGTTGAAACTTCGCTTAGATCACATCGCCAGCATCTAGATCACATCTACAGTCGTTAGTTTTGTTAAGCAAGCTTTTAAGAAATATTGTTGTTGAACCCAAATTTCTCCCATATATATCCAGATCCAGATCGGCCTAAGAATGATAAGGCAACAATCCTGACAGATACGATCCAAATATTAAGAGATTTGACTGCTGAGGTCAACAAACTGAAAGCTGAATCCAATACACTCTCAGAGGAATCACATGAGGTGACATTCTTTCTACTTTAAAGACTGTGAGATCATCCAAGTGCATTTCTGATAGGGTTGATTGCAACAGCTGACCCAGGAGAAAAATGAGCTCAGAGAAGAGAAGTCATCCCTAAAATCAGACATTGAGAATCTCAATGCTCAGTATCAACAGAGACTCAGGGTTGTTTACCCTTGGGGTGCATCTGTTGAACCTTCCGTTGTTATGGGCCCACCTTACTCATATCCGCTTCCAATGCCTTACCCTTTCTTTGGAAGCCAAAATGCTAGTACAATTCCTAGCTCTCATCCAGCTTTTATGCCATACCCGACAACCCCAAATCCAAATGTTGAACAACAACCCATTCAGCCTGCAACCACTTATGTAATGAGCAAACCAGATTCTCGAAGCAAAGGTTTAGACAGCGGAAAAAAAGCCAGACATCTTGAGAGAACCGACGATTCCAGTGATGTAGCAACAGAGCTGGAACTGAAGACACCCGGTTGTGGGCGACAGCAGGTTAGTTGAATCAGTGCTTAGGTTTGCCCCACTGTTTAAGTTGTATGGGAAAATGCATGACTAGTTACCAAAAACTCAAAAAGAATAATGCCTGAATGGATTTTTCATGTTTATGCAGAATTCATTGTGCAAGCAATCAAAAAAGAAGGAAAAAAGTGCTGCAGATGGAGATTCTTCAAGCAAAGTTTCCTCCTGTCAAGGACCTCAAGAGAGTTCTTCCAATAGTGTAAGTCACATTCCAAAAATATGACAAGTGAAGCAGTTGCAGATATCCCTTTCTCTTTATTAGCTACGCAACATTCAATTATGTATAAACAAGCTAGGGATAGAACAACAGGCAAGTAAACATGTACTTCCTGTTGCACGTACATGTGTTATCATAGTTAGGTCCTGAAACTCCTGACTTAGATCAATCTGGTGCTGTGTCAAGGCTTGTTTGA ACCAATTTATGGAAAAAACGGAGCGTGTGCACGCCACAATTACAATTGCTCCCTTCCTTAAGTTTAAGCTCGTGGAAAGCACAAGCACACTGATCATCCCCCTTTTTCTTTTATGGGTTCAGTTCATCTTCCCATAAGCAGACAACAACAAACACCTATACAATTTTATGTATTTTCTCACTTATTTCGCTAAATCCTGCTGTAATCAAATACCCAAATATCATAAACCCTAATTTGGTTTAGTTTGAAGCAGAATAATTAGGAATTTGTCACTACTAAATTATGGATCAAACTCTTGATCGATCCCAAAGCTCACAGCTTGATTCCAGACAAAGGCCAGAAGCAGAAGTGAATGACCCCGTCGCTGTACGAAAGGTTCAGAAGGCAGATCGGGAAAAATTGAGGAGGGATCGGTTAAATGACCACTTTCAAGAGCTTGGAAGTGCTATAGATCCAGATCGGCCTAAGAATGATAAGGCAACAATCCTGACAGATACGATCCAAATATTAAGAGATTTGACTGCTGAGGTCAACAAACTGAAAGCTGAATCCAATACACTCTCAGAGGAATCACATGAGCTGACCCAGGAGAAAAATGAGCTCAGAGAAGAGAAGTCATCCCTAAAATCAGACATTGAGAATCTCAATGCTCAGTATCAACAGAGACTCAGGGTTGTTTACCCTTGGGGTGCATCTGTTGAACCTTCCGTTGTTATGGGCCCACCTTACTCATATCCGCTTCCAATGCCTTACCCTTTCTTTGGAAGCCAAAATGCTAGTACAATTCCTAGCTCTCATCCAGCTTTTATGCCATACCCGACAACCCCAAATCCAAATGTTGAACAACAACCCATTCAGCCTGCAACCACTTATGTAATGAGCAAACCAGATTCTCGAAGCAAAGGTTTAGACAGCGGAAAAAAAGCCAGACATCTTGAGAGAACCGACGATTCCAGTGATGTAGCAACAGAGCTGGAACTGAAGACACCCGGTTGTGGGCGACAGCAGAATTCATTGTGCAAGCAATCAAAAAAGAAGGAAAAAAGTGCTGCAGATGGAGATTCTTCAAGCAAAGTTTCCTCCTGTCAAGGACCTCAAGAGAGTTCTTCCAATAGTTTAGGTCCTGAAACTCCTGACTTAGATCAATCTGGTGCTGTGTCAAGGCTTGTTTGA ATGGATCAAACTCTTGATCGATCCCAAAGCTCACAGCTTGATTCCAGACAAAGGCCAGAAGCAGAAGTGAATGACCCCGTCGCTGTACGAAAGGTTCAGAAGGCAGATCGGGAAAAATTGAGGAGGGATCGGTTAAATGACCACTTTCAAGAGCTTGGAAGTGCTATAGATCCAGATCGGCCTAAGAATGATAAGGCAACAATCCTGACAGATACGATCCAAATATTAAGAGATTTGACTGCTGAGGTCAACAAACTGAAAGCTGAATCCAATACACTCTCAGAGGAATCACATGAGCTGACCCAGGAGAAAAATGAGCTCAGAGAAGAGAAGTCATCCCTAAAATCAGACATTGAGAATCTCAATGCTCAGTATCAACAGAGACTCAGGGTTGTTTACCCTTGGGGTGCATCTGTTGAACCTTCCGTTGTTATGGGCCCACCTTACTCATATCCGCTTCCAATGCCTTACCCTTTCTTTGGAAGCCAAAATGCTAGTACAATTCCTAGCTCTCATCCAGCTTTTATGCCATACCCGACAACCCCAAATCCAAATGTTGAACAACAACCCATTCAGCCTGCAACCACTTATGTAATGAGCAAACCAGATTCTCGAAGCAAAGGTTTAGACAGCGGAAAAAAAGCCAGACATCTTGAGAGAACCGACGATTCCAGTGATGTAGCAACAGAGCTGGAACTGAAGACACCCGGTTGTGGGCGACAGCAGAATTCATTGTGCAAGCAATCAAAAAAGAAGGAAAAAAGTGCTGCAGATGGAGATTCTTCAAGCAAAGTTTCCTCCTGTCAAGGACCTCAAGAGAGTTCTTCCAATAGTTTAGGTCCTGAAACTCCTGACTTAGATCAATCTGGTGCTGTGTCAAGGCTTGTTTGA MDQTLDRSQSSQLDSRQRPEAEVNDPVAVRKVQKADREKLRRDRLNDHFQELGSAIDPDRPKNDKATILTDTIQILRDLTAEVNKLKAESNTLSEESHELTQEKNELREEKSSLKSDIENLNAQYQQRLRVVYPWGASVEPSVVMGPPYSYPLPMPYPFFGSQNASTIPSSHPAFMPYPTTPNPNVEQQPIQPATTYVMSKPDSRSKGLDSGKKARHLERTDDSSDVATELELKTPGCGRQQNSLCKQSKKKEKSAADGDSSSKVSSCQGPQESSSNSLGPETPDLDQSGAVSRLV Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo07182.1 vs. NCBI nr
Match: gi|731337708|ref|XP_010679934.1| (PREDICTED: transcription factor bHLH121 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 409.5 bits (1051), Expect = 5.200e-111 Identity = 235/297 (79.12%), Postives = 250/297 (84.18%), Query Frame = 1
BLAST of Spo07182.1 vs. NCBI nr
Match: gi|902181900|gb|KNA09826.1| (hypothetical protein SOVF_149970 [Spinacia oleracea]) HSP 1 Score: 377.1 bits (967), Expect = 2.800e-101 Identity = 196/196 (100.00%), Postives = 196/196 (100.00%), Query Frame = 1
BLAST of Spo07182.1 vs. NCBI nr
Match: gi|1009144145|ref|XP_015889640.1| (PREDICTED: transcription factor bHLH121-like [Ziziphus jujuba]) HSP 1 Score: 308.5 bits (789), Expect = 1.200e-80 Identity = 183/297 (61.62%), Postives = 222/297 (74.75%), Query Frame = 1
BLAST of Spo07182.1 vs. NCBI nr
Match: gi|659080488|ref|XP_008440819.1| (PREDICTED: transcription factor bHLH121 [Cucumis melo]) HSP 1 Score: 296.6 bits (758), Expect = 4.900e-77 Identity = 177/295 (60.00%), Postives = 222/295 (75.25%), Query Frame = 1
BLAST of Spo07182.1 vs. NCBI nr
Match: gi|778719699|ref|XP_011658044.1| (PREDICTED: transcription factor bHLH121 [Cucumis sativus]) HSP 1 Score: 296.2 bits (757), Expect = 6.400e-77 Identity = 178/295 (60.34%), Postives = 222/295 (75.25%), Query Frame = 1
BLAST of Spo07182.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CBN7_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g130620 PE=4 SV=1) HSP 1 Score: 409.5 bits (1051), Expect = 3.600e-111 Identity = 235/297 (79.12%), Postives = 250/297 (84.18%), Query Frame = 1
BLAST of Spo07182.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QTH1_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_149970 PE=4 SV=1) HSP 1 Score: 377.1 bits (967), Expect = 2.000e-101 Identity = 196/196 (100.00%), Postives = 196/196 (100.00%), Query Frame = 1
BLAST of Spo07182.1 vs. UniProtKB/TrEMBL
Match: A0A0A0KGN6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G505920 PE=4 SV=1) HSP 1 Score: 296.2 bits (757), Expect = 4.400e-77 Identity = 178/295 (60.34%), Postives = 222/295 (75.25%), Query Frame = 1
BLAST of Spo07182.1 vs. UniProtKB/TrEMBL
Match: M5WH39_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008596mg PE=4 SV=1) HSP 1 Score: 290.4 bits (742), Expect = 2.400e-75 Identity = 170/295 (57.63%), Postives = 215/295 (72.88%), Query Frame = 1
BLAST of Spo07182.1 vs. UniProtKB/TrEMBL
Match: D7SNZ5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0023g03430 PE=4 SV=1) HSP 1 Score: 289.7 bits (740), Expect = 4.100e-75 Identity = 175/298 (58.72%), Postives = 216/298 (72.48%), Query Frame = 1
BLAST of Spo07182.1 vs. ExPASy Swiss-Prot
Match: BH121_ARATH (Transcription factor bHLH121 OS=Arabidopsis thaliana GN=BHLH121 PE=2 SV=1) HSP 1 Score: 223.8 bits (569), Expect = 2.500e-57 Identity = 143/292 (48.97%), Postives = 192/292 (65.75%), Query Frame = 1
BLAST of Spo07182.1 vs. ExPASy Swiss-Prot
Match: BH011_ARATH (Transcription factor bHLH11 OS=Arabidopsis thaliana GN=BHLH11 PE=2 SV=2) HSP 1 Score: 143.7 bits (361), Expect = 3.300e-33 Identity = 106/254 (41.73%), Postives = 145/254 (57.09%), Query Frame = 1
BLAST of Spo07182.1 vs. ExPASy Swiss-Prot
Match: ILR3_ARATH (Transcription factor ILR3 OS=Arabidopsis thaliana GN=ILR3 PE=1 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 2.200e-13 Identity = 59/155 (38.06%), Postives = 86/155 (55.48%), Query Frame = 1
BLAST of Spo07182.1 vs. ExPASy Swiss-Prot
Match: BH115_ARATH (Transcription factor bHLH115 OS=Arabidopsis thaliana GN=BHLH115 PE=2 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 1.100e-12 Identity = 45/92 (48.91%), Postives = 59/92 (64.13%), Query Frame = 1
BLAST of Spo07182.1 vs. ExPASy Swiss-Prot
Match: BH034_ARATH (Transcription factor bHLH34 OS=Arabidopsis thaliana GN=BHLH34 PE=2 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 3.200e-12 Identity = 53/147 (36.05%), Postives = 81/147 (55.10%), Query Frame = 1
BLAST of Spo07182.1 vs. TAIR (Arabidopsis)
Match: AT3G19860.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein) HSP 1 Score: 223.8 bits (569), Expect = 1.400e-58 Identity = 143/292 (48.97%), Postives = 192/292 (65.75%), Query Frame = 1
BLAST of Spo07182.1 vs. TAIR (Arabidopsis)
Match: AT4G36060.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein) HSP 1 Score: 143.7 bits (361), Expect = 1.900e-34 Identity = 106/254 (41.73%), Postives = 145/254 (57.09%), Query Frame = 1
BLAST of Spo07182.1 vs. TAIR (Arabidopsis)
Match: AT5G54680.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein) HSP 1 Score: 77.8 bits (190), Expect = 1.300e-14 Identity = 59/155 (38.06%), Postives = 86/155 (55.48%), Query Frame = 1
BLAST of Spo07182.1 vs. TAIR (Arabidopsis)
Match: AT1G51070.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein) HSP 1 Score: 75.5 bits (184), Expect = 6.200e-14 Identity = 45/92 (48.91%), Postives = 59/92 (64.13%), Query Frame = 1
BLAST of Spo07182.1 vs. TAIR (Arabidopsis)
Match: AT3G23210.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein) HSP 1 Score: 73.9 bits (180), Expect = 1.800e-13 Identity = 53/147 (36.05%), Postives = 81/147 (55.10%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo07182.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo07182.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo07182.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo07182.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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