Spo07176 (gene)

Overview
NameSpo07176
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionEndA/NucM family nuclease
LocationSpoScf_00419 : 177259 .. 181024 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTAAACAAAAAGATGAAAAAAATAAATTACACAAGAGTGGAAGAACACTTGACACCAGTCCTGCCTCCCACTTTGAGTGACTTACAATTACAAAGGGAAAGATTGAAATTATTGGTAGTAAAACAACCCATTATCCCCTTCCTTTTGGCAACAACAAAACAAACCAATGCAGAATTGCAGAATGCTGAATATCCCACCAATAATTACCATTTCAACATTTCCCAGAATCAAAACTACCCATTTTCAGCAAATCAATAATAAACCCACTTCAATTTTCTCAAATCATTATCCCCAAAAACAAATAAACTGCAAAAAAAACTGTTTTTATTCCACCAATTTCATATTCAGTTCCATTTCCAGGTTAGTTATGATTTTTTCTATTTAATCATTGTTTTTTGTGTCAATAATTATTTGTACTTCATGAACAAAATTGCTAGTTGTTGAGTATATAATTGTATTGATCCAACACATTTCCGATAACCCACTAATTTTTGTTTGATGATTATTATAGAACAATCAGTTTTATCTTATAGAAGTATCAATTTGTTTGATAATTATAATAGAAGTATTATTATTAGTCTTTTTAGTGTAAATGGTGGGTCATGAAATTCAGGATTTAGGGGATTTTGTCCTTTAAGTTGATAATAATGGAGTATGTGACAACAGCTGAACTTTGGGATTTATTCTGCCCTAAAAGTTGTATAAAGAAAGTGTGTATATTCAGCCGTCTAATGGGCAGTAAAGAACATCCATTATAAGTCATGGAATAGATTACAATATATTGATTTCGATTTCGTCGAATGGGCGACTTTAAGGGATGGGATGGGATGGAAATGTTGTACATGTAGGTTTTGTGATATTGGTGATGTTATGACAATTAAGCTTAAGCCTTAAGGTTGAAGATAGTGTAAAAAATTCATTAAAACAAGAATTTAGGATGTGAGTTGGTTTGATTGATCAAGGTATGAGCAAGGGGAAATAATCAAAGTTTAACATTATTAGACCTTCAAAAGATTTGCTAAATGTAATAATTATCAAGTGAGTTCTGCTTTATTGAAATGTAAAAATAGAATTGGAAAATTGGCCTGGATTCATGATGTTGTATCAGTGGCAAATGGAGAACATGATATGATATTGATTAGAAAAAAATGTTTATATCTTCAGGGTATTTTTGAAGTGGACATTCTCTTGCTTCCATGGAAATCTCCCGAAAATGGCTTCCTGTATTATCGTTGTATACTTGTTTGTCCTTAGTCCGGAAGTTAATGCCCAAGACCACTCATCATTTCCGGTGAGGTATGCTTGTGAAGATGTGAAAAGTTATTACGCTAGCATTGATCATTTAAAAGGTAAAGCCTTAAGCAGAAAATTGAACTCGATCATAGCAGGGCATCACTCATTATCATACAAGAAGGTGGTTATGTGTTTTGTGTTGTTTGTCTATATACGATTCTCTAGGAAACTGAATAGTGTCAGCTTTAAAACAGGTATGGGATGCTCTTGAAATTCTTGATGCTGCTGATGTTGATAAACCAGAAGCGTCACCGGTTATGTATGCCTCTTATCAGTACTTCTCTGAATGTTATATACTACGCAGTTGAATGGTAGAAGTATAAATGAAGATATTGCTGAATTTTCTTATACAGAGTTGAAATCTACTCGGCCCGAGTTGTTCCAAAGCTTCTAGCTGGAAAACCTGAAGGCTGGAACAGTGAGTGATTCCCTTGTTCTTTTGGTGTATCTTCTGCTTCTTTTGAAGTTCAATTAATGTCATCGTTGTCACAGCTCTGTGAGCATAATTAATGTAACAGTTTCCACCATGTACAATATGAAAGATGCATATGCTTGGCCATTGAGTTCACATCTTTTATTTCTCTAGTTACCTTTGCTTTACACAAGCCTAAGCACTTGAATCAATGTTCTCTTCCACAGCGATCTTATGCAATTTTTCATCCTATTCATTTGCGTGTACATTTCACTATTTCAGTGACTGTGTGGTCTTTTTTTAGGAGAGCATCTCTGGCCTCGTTCGTATGGGCTAATGCATAAGCCTTCTCTAACTGATTTGCATAACATTCGTCCAGCTGATGCTAACGGTATTAAGTTAATCTCATTGCAGTGAAGCAATATTTGTAGCTCATTATGTGACCGTATTTTAATATTCGTTTTCAGTGAACTCATCAAGAGGGAACAAGTATTTTGGAGAGTGCCAAGTTGGATTAACACACTGTATGAGGCCTGCAAATAAGGAAGCCGCTTCTGACACAGAAACAGATATGAAGATTTGGGCACCACCGCAACGGGTATGTGCCTGTGTGTACATTAGGGGTTTGGGCTCTACTGCTCCTGTTTTGGTCACAGTAATAATGTCAGATATAATTCCAATCCACAGGAAAGGCACACATCAGTAAAATATCTTTACTGTTGAGATTATATTATTATTTTTATGATTGTTAGTGAAACTACTATATGAAGAACAGGTGTATTATTGTTTTCTTCAATGCCTCCAGGTCAGAGGGGATGTTGCACGAGCAGTAATGTACATGGCTATTCGATATGGGTTTCATCAACCTGGTGAAGGTCCTGTTCTTCACCTATCAGATTCTCCAAGCATGGGTAGGTTGAAAGTTAAAGTTATGTTTAAAGAGGATAAAGCCATAAAGGAGACCAAATTACAGAGTTCTAGTTGATAGAAGGGTCGCGATAATGATACTTTATCTTCTTCGCTAATTACCTATAGAAAAACTCTTTTCGTTATCATATTGATATGTTTTTTTATGATTGCTATTGCTATCTGGTGGTCACAGACTCACAGAAATAGGAAATCTGCTCGACTCATAGACCTTTAGCCTATCTATCACCTTGCAAAATATCCTTTCAACATGAATTGAAGCATATAATATTCTGCATTTAAAATTTTGTTTAGAGTATTTCTGAAGAATACTCTGGTGTCAATGATTTATTAGAAGGGATTCTGGTCTCTGCTGGACATACTTCCGGGAACAAAAATATGCGCGCATGTAATAGTTAGATTTCCAATTTTCTAGTGTCTTAAGTCCCCTAACCCACCAACCTACATAGAACACTTGTTCCTACTAGATTTTTTCCCTAAATTTTTTACAATAGATGATTTGGTGTAAATAATAGCTAGAAGAACTTGTAAGAAGATATCAAGAATTTGAATTTGTCCATCTGATGCTTTTATCTAGAATTTGTGGTCCAAATCATTCTATACTTGTATTTTACATATGATATAACAATATTAGCTACGTATTGTCCTGTTTTTGCAGTGAAGAAGAAGATGGGACAACTCTCAATTATACTGAAATGGAATGAGTTAGACCCTCCATCTAAAGAGGAAAAGGCGAGAAACGAAAGAGTATGTAGGCTTTACCAGCACAATAGAAACCCATTTGTAGATCATCCAGAGTATGCTAATCTGATTTGGAATCAAAGTCAGAAAAGTTCTTCTAACACCTCGAAACTGTGGTCATCCATCCAGCAACTAGGACTCTGGAAAACATAACATTGATACTGTTGTATTGCGCGCTTGTACAGTTGTACGGGTACAGTAACTGTCAATCTAAATACTCGACTTGTTTGTGTGTTATGGTGCAGTTTCTGTATGAAAACAAGTTAGAGAAGTATTATTTCCCTTTCACCTCTTCCCTTGCTGTTCTGTTTTGTCTTTACTTTTGTCTTTCTCTTGAGTAATTTGACAGTCTGATATCCAGTTCTCACAATCCCATATGCCACTAGCTGCAAG

mRNA sequence

TTAAACAAAAAGATGAAAAAAATAAATTACACAAGAGTGGAAGAACACTTGACACCAGTCCTGCCTCCCACTTTGAGTGACTTACAATTACAAAGGGAAAGATTGAAATTATTGGTAGTAAAACAACCCATTATCCCCTTCCTTTTGGCAACAACAAAACAAACCAATGCAGAATTGCAGAATGCTGAATATCCCACCAATAATTACCATTTCAACATTTCCCAGAATCAAAACTACCCATTTTCAGCAAATCAATAATAAACCCACTTCAATTTTCTCAAATCATTATCCCCAAAAACAAATAAACTGCAAAAAAAACTGTTTTTATTCCACCAATTTCATATTCAGTTCCATTTCCAGGGTATTTTTGAAGTGGACATTCTCTTGCTTCCATGGAAATCTCCCGAAAATGGCTTCCTGTATTATCGTTGTATACTTGTTTGTCCTTAGTCCGGAAGTTAATGCCCAAGACCACTCATCATTTCCGGTGAGGTATGCTTGTGAAGATGTGAAAAGTTATTACGCTAGCATTGATCATTTAAAAGGTAAAGCCTTAAGCAGAAAATTGAACTCGATCATAGCAGGGCATCACTCATTATCATACAAGAAGGTATGGGATGCTCTTGAAATTCTTGATGCTGCTGATGTTGATAAACCAGAAGCGTCACCGGTTATAGTTGAAATCTACTCGGCCCGAGTTGTTCCAAAGCTTCTAGCTGGAAAACCTGAAGGCTGGAACAGAGAGCATCTCTGGCCTCGTTCGTATGGGCTAATGCATAAGCCTTCTCTAACTGATTTGCATAACATTCGTCCAGCTGATGCTAACGTGAACTCATCAAGAGGGAACAAGTATTTTGGAGAGTGCCAAGTTGGATTAACACACTGTATGAGGCCTGCAAATAAGGAAGCCGCTTCTGACACAGAAACAGATATGAAGATTTGGGCACCACCGCAACGGGTCAGAGGGGATGTTGCACGAGCAGTAATGTACATGGCTATTCGATATGGGTTTCATCAACCTGGTGAAGGTCCTGTTCTTCACCTATCAGATTCTCCAAGCATGGTGAAGAAGAAGATGGGACAACTCTCAATTATACTGAAATGGAATGAGTTAGACCCTCCATCTAAAGAGGAAAAGGCGAGAAACGAAAGAGTATGTAGGCTTTACCAGCACAATAGAAACCCATTTGTAGATCATCCAGAGTATGCTAATCTGATTTGGAATCAAAGTCAGAAAAGTTCTTCTAACACCTCGAAACTGTGGTCATCCATCCAGCAACTAGGACTCTGGAAAACATAACATTGATACTGTTGTATTGCGCGCTTGTACAGTTGTACGGGTACAGTAACTGTCAATCTAAATACTCGACTTGTTTGTGTGTTATGGTGCAGTTTCTGTATGAAAACAAGTTAGAGAAGTATTATTTCCCTTTCACCTCTTCCCTTGCTGTTCTGTTTTGTCTTTACTTTTGTCTTTCTCTTGAGTAATTTGACAGTCTGATATCCAGTTCTCACAATCCCATATGCCACTAGCTGCAAG

Coding sequence (CDS)

ATGCAGAATTGCAGAATGCTGAATATCCCACCAATAATTACCATTTCAACATTTCCCAGAATCAAAACTACCCATTTTCAGCAAATCAATAATAAACCCACTTCAATTTTCTCAAATCATTATCCCCAAAAACAAATAAACTGCAAAAAAAACTGTTTTTATTCCACCAATTTCATATTCAGTTCCATTTCCAGGGTATTTTTGAAGTGGACATTCTCTTGCTTCCATGGAAATCTCCCGAAAATGGCTTCCTGTATTATCGTTGTATACTTGTTTGTCCTTAGTCCGGAAGTTAATGCCCAAGACCACTCATCATTTCCGGTGAGGTATGCTTGTGAAGATGTGAAAAGTTATTACGCTAGCATTGATCATTTAAAAGGTAAAGCCTTAAGCAGAAAATTGAACTCGATCATAGCAGGGCATCACTCATTATCATACAAGAAGGTATGGGATGCTCTTGAAATTCTTGATGCTGCTGATGTTGATAAACCAGAAGCGTCACCGGTTATAGTTGAAATCTACTCGGCCCGAGTTGTTCCAAAGCTTCTAGCTGGAAAACCTGAAGGCTGGAACAGAGAGCATCTCTGGCCTCGTTCGTATGGGCTAATGCATAAGCCTTCTCTAACTGATTTGCATAACATTCGTCCAGCTGATGCTAACGTGAACTCATCAAGAGGGAACAAGTATTTTGGAGAGTGCCAAGTTGGATTAACACACTGTATGAGGCCTGCAAATAAGGAAGCCGCTTCTGACACAGAAACAGATATGAAGATTTGGGCACCACCGCAACGGGTCAGAGGGGATGTTGCACGAGCAGTAATGTACATGGCTATTCGATATGGGTTTCATCAACCTGGTGAAGGTCCTGTTCTTCACCTATCAGATTCTCCAAGCATGGTGAAGAAGAAGATGGGACAACTCTCAATTATACTGAAATGGAATGAGTTAGACCCTCCATCTAAAGAGGAAAAGGCGAGAAACGAAAGAGTATGTAGGCTTTACCAGCACAATAGAAACCCATTTGTAGATCATCCAGAGTATGCTAATCTGATTTGGAATCAAAGTCAGAAAAGTTCTTCTAACACCTCGAAACTGTGGTCATCCATCCAGCAACTAGGACTCTGGAAAACATAA

Protein sequence

MQNCRMLNIPPIITISTFPRIKTTHFQQINNKPTSIFSNHYPQKQINCKKNCFYSTNFIFSSISRVFLKWTFSCFHGNLPKMASCIIVVYLFVLSPEVNAQDHSSFPVRYACEDVKSYYASIDHLKGKALSRKLNSIIAGHHSLSYKKVWDALEILDAADVDKPEASPVIVEIYSARVVPKLLAGKPEGWNREHLWPRSYGLMHKPSLTDLHNIRPADANVNSSRGNKYFGECQVGLTHCMRPANKEAASDTETDMKIWAPPQRVRGDVARAVMYMAIRYGFHQPGEGPVLHLSDSPSMVKKKMGQLSIILKWNELDPPSKEEKARNERVCRLYQHNRNPFVDHPEYANLIWNQSQKSSSNTSKLWSSIQQLGLWKT
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo07176.1Spo07176.1mRNA


Homology
[Close]
BLAST of Spo07176.1 vs. NCBI nr
Match: gi|902212125|gb|KNA16885.1| (hypothetical protein SOVF_085140 [Spinacia oleracea])

HSP 1 Score: 614.8 bits (1584), Expect = 1.000e-172
Identity = 296/296 (100.00%), Postives = 296/296 (100.00%), Query Frame = 1 

		  

Query: 82  MASCIIVVYLFVLSPEVNAQDHSSFPVRYACEDVKSYYASIDHLKGKALSRKLNSIIAGH 141
           MASCIIVVYLFVLSPEVNAQDHSSFPVRYACEDVKSYYASIDHLKGKALSRKLNSIIAGH
Sbjct: 1   MASCIIVVYLFVLSPEVNAQDHSSFPVRYACEDVKSYYASIDHLKGKALSRKLNSIIAGH 60

Query: 142 HSLSYKKVWDALEILDAADVDKPEASPVIVEIYSARVVPKLLAGKPEGWNREHLWPRSYG 201
           HSLSYKKVWDALEILDAADVDKPEASPVIVEIYSARVVPKLLAGKPEGWNREHLWPRSYG
Sbjct: 61  HSLSYKKVWDALEILDAADVDKPEASPVIVEIYSARVVPKLLAGKPEGWNREHLWPRSYG 120

Query: 202 LMHKPSLTDLHNIRPADANVNSSRGNKYFGECQVGLTHCMRPANKEAASDTETDMKIWAP 261
           LMHKPSLTDLHNIRPADANVNSSRGNKYFGECQVGLTHCMRPANKEAASDTETDMKIWAP
Sbjct: 121 LMHKPSLTDLHNIRPADANVNSSRGNKYFGECQVGLTHCMRPANKEAASDTETDMKIWAP 180

Query: 262 PQRVRGDVARAVMYMAIRYGFHQPGEGPVLHLSDSPSMVKKKMGQLSIILKWNELDPPSK 321
           PQRVRGDVARAVMYMAIRYGFHQPGEGPVLHLSDSPSMVKKKMGQLSIILKWNELDPPSK
Sbjct: 181 PQRVRGDVARAVMYMAIRYGFHQPGEGPVLHLSDSPSMVKKKMGQLSIILKWNELDPPSK 240

Query: 322 EEKARNERVCRLYQHNRNPFVDHPEYANLIWNQSQKSSSNTSKLWSSIQQLGLWKT 378
           EEKARNERVCRLYQHNRNPFVDHPEYANLIWNQSQKSSSNTSKLWSSIQQLGLWKT
Sbjct: 241 EEKARNERVCRLYQHNRNPFVDHPEYANLIWNQSQKSSSNTSKLWSSIQQLGLWKT 296
[Close]
BLAST of Spo07176.1 vs. NCBI nr
Match: gi|731354174|ref|XP_010688441.1| (PREDICTED: uncharacterized protein LOC104902380 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 526.2 bits (1354), Expect = 4.800e-146
Identity = 265/366 (72.40%), Postives = 299/366 (81.69%), Query Frame = 1 

		  

Query: 11  PIITISTFPRIKTTHFQQIN-NKPTSIFSN-HYPQKQINCKKNCFYSTNFIFSSISRVFL 70
           P+ +ISTFP+IK T+FQQ N +K   I  N HYP K  N    C       FSS SR FL
Sbjct: 5   PLTSISTFPKIKATNFQQFNYDKFNYILPNYHYPLKIRNFSCCCTK-----FSSFSRRFL 64

Query: 71  KWTFSCFHGNLPKMASCIIVVYLFVLSPEVNAQDHSSFPVRYACEDVKSYYASIDHLKGK 130
            WT    HGNLP++AS +I +YL  L P+ NA+DHSSFP++YACEDVKSYYASI+ LKGK
Sbjct: 65  DWT--SVHGNLPRLASWLISLYLVFLCPDANAEDHSSFPIKYACEDVKSYYASINDLKGK 124

Query: 131 ALSRKLNSIIAGHHSLSYKKVWDALEILDAADVDKPEASPVIVEIYSARVVPKLLAGKPE 190
           ALSRKLNSIIAGHHSLSYK+VWDAL+ILDAAD+D+PEAS  IVEIYS R+VPK LAGKPE
Sbjct: 125 ALSRKLNSIIAGHHSLSYKEVWDALKILDAADLDEPEASSGIVEIYSGRIVPKGLAGKPE 184

Query: 191 GWNREHLWPRSYGLMHKPSLTDLHNIRPADANVNSSRGNKYFGECQVGLTHCMRPANKEA 250
           GWNREHLWPRSYG+   P LTDLHNIRPAD NVNSSRGNKYFGEC+VG THCM+PANKEA
Sbjct: 185 GWNREHLWPRSYGITRGPFLTDLHNIRPADVNVNSSRGNKYFGECRVGSTHCMKPANKEA 244

Query: 251 ASDTETDMKIWAPPQRVRGDVARAVMYMAIRYGFHQPGEGPVLHLSDSPSMVKKKMGQLS 310
           ASDTETD KIWAPP +VRGDVARAVMYMA+RYGFHQ  EGPVL LSDSPSMVKK+MG L+
Sbjct: 245 ASDTETDTKIWAPPYQVRGDVARAVMYMAVRYGFHQSAEGPVLRLSDSPSMVKKEMGLLT 304

Query: 311 IILKWNELDPPSKEEKARNERVCRLYQHNRNPFVDHPEYANLIWN---QSQKSSSNTSKL 370
            +L+WNELDPPS+EEK RNERVCRL+QHNRNPFVDHPEYANLIW     S + SS  SK 
Sbjct: 305 TLLEWNELDPPSQEEKLRNERVCRLFQHNRNPFVDHPEYANLIWKHAVSSHRRSSYISKP 363

Query: 371 WSSIQQ 372
            ++IQ+
Sbjct: 365 STTIQR 363
[Close]
BLAST of Spo07176.1 vs. NCBI nr
Match: gi|297735431|emb|CBI17871.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 421.4 bits (1082), Expect = 1.700e-114
Identity = 200/290 (68.97%), Postives = 234/290 (80.69%), Query Frame = 1 

		  

Query: 81  KMASCIIVVYLFVLSPEVNAQDHSSFPVRYACEDVKSYYASIDHLKGKALSRKLNSIIAG 140
           + AS II ++LF  +    A DHSS  + Y CEDV SYYA ++HL+G+AL +KLNSII+ 
Sbjct: 11  RWASRIIFIFLFCFNFVAEAYDHSSLSLSYDCEDVSSYYAQVEHLEGEALKKKLNSIISE 70

Query: 141 HHSLSYKKVWDALEILDAADVDKPEASPVIVEIYSARVVPKLLAGKPEGWNREHLWPRSY 200
           H SLSYK+VW+AL+ILDAADVD PEAS  IVEIYS RVV K LAGKPEGWNREHLWPRSY
Sbjct: 71  HRSLSYKEVWNALKILDAADVDNPEASLGIVEIYSLRVVSKDLAGKPEGWNREHLWPRSY 130

Query: 201 GLMHKPSLTDLHNIRPADANVNSSRGNKYFGECQVGLTHCMRPANKEAASDTETDMKIWA 260
           GL+  PSLTDLHNIRPAD NVNSSRGNKY+GEC V    C++PANKEAASDTETD + W 
Sbjct: 131 GLIDHPSLTDLHNIRPADVNVNSSRGNKYYGECGVKSNKCLKPANKEAASDTETDKEKWT 190

Query: 261 PPQRVRGDVARAVMYMAIRYGFHQPGEGPVLHLSDSPSMVKKKMGQLSIILKWNELDPPS 320
           PP +VRGD+ARA+MYMA+ YGFHQPG GP L LSDSPS+  ++MG LS +L+WNE+DPPS
Sbjct: 191 PPLQVRGDIARALMYMAVGYGFHQPGGGPGLRLSDSPSIRNREMGLLSTLLEWNEIDPPS 250

Query: 321 KEEKARNERVCRLYQHNRNPFVDHPEYANLIWNQSQKSSSNTSKLWSSIQ 371
           +EEK RNER+C+LYQHNRNPFVDHPEYANLIW Q+  S  N  K  +S Q
Sbjct: 251 REEKLRNERICKLYQHNRNPFVDHPEYANLIWKQATPSQRNHPKTLASPQ 300
[Close]
BLAST of Spo07176.1 vs. NCBI nr
Match: gi|731408620|ref|XP_010656923.1| (PREDICTED: uncharacterized protein LOC100265069 [Vitis vinifera])

HSP 1 Score: 411.8 bits (1057), Expect = 1.300e-111
Identity = 191/264 (72.35%), Postives = 221/264 (83.71%), Query Frame = 1 

		  

Query: 98  VNAQDHSSFPVRYACEDVKSYYASIDHLKGKALSRKLNSIIAGHHSLSYKKVWDALEILD 157
           + A DHSS  + Y CEDV SYYA ++HL+G+AL +KLNSII+ H SLSYK+VW+AL+ILD
Sbjct: 36  LEAYDHSSLSLSYDCEDVSSYYAQVEHLEGEALKKKLNSIISEHRSLSYKEVWNALKILD 95

Query: 158 AADVDKPEASPVIVEIYSARVVPKLLAGKPEGWNREHLWPRSYGLMHKPSLTDLHNIRPA 217
           AADVD PEAS  IVEIYS RVV K LAGKPEGWNREHLWPRSYGL+  PSLTDLHNIRPA
Sbjct: 96  AADVDNPEASLGIVEIYSLRVVSKDLAGKPEGWNREHLWPRSYGLIDHPSLTDLHNIRPA 155

Query: 218 DANVNSSRGNKYFGECQVGLTHCMRPANKEAASDTETDMKIWAPPQRVRGDVARAVMYMA 277
           D NVNSSRGNKY+GEC V    C++PANKEAASDTETD + W PP +VRGD+ARA+MYMA
Sbjct: 156 DVNVNSSRGNKYYGECGVKSNKCLKPANKEAASDTETDKEKWTPPLQVRGDIARALMYMA 215

Query: 278 IRYGFHQPGEGPVLHLSDSPSMVKKKMGQLSIILKWNELDPPSKEEKARNERVCRLYQHN 337
           + YGFHQPG GP L LSDSPS+  ++MG LS +L+WNE+DPPS+EEK RNER+C+LYQHN
Sbjct: 216 VGYGFHQPGGGPGLRLSDSPSIRNREMGLLSTLLEWNEIDPPSREEKLRNERICKLYQHN 275

Query: 338 RNPFVDHPEYANLIWNQSQKSSSN 362
           RNPFVDHPEYANLIW Q+  S  N
Sbjct: 276 RNPFVDHPEYANLIWKQATPSQRN 299
[Close]
BLAST of Spo07176.1 vs. NCBI nr
Match: gi|147855531|emb|CAN79602.1| (hypothetical protein VITISV_012634 [Vitis vinifera])

HSP 1 Score: 408.7 bits (1049), Expect = 1.100e-110
Identity = 190/268 (70.90%), Postives = 220/268 (82.09%), Query Frame = 1 

		  

Query: 94  LSPEVNAQDHSSFPVRYACEDVKSYYASIDHLKGKALSRKLNSIIAGHHSLSYKKVWDAL 153
           +S    A DHSS  + Y CEDV SYYA + HL+G+AL +KLNSII+ H SLSYK+VW+AL
Sbjct: 67  ISAVTXAYDHSSLSLSYDCEDVSSYYAQVGHLEGEALKKKLNSIISEHRSLSYKEVWNAL 126

Query: 154 EILDAADVDKPEASPVIVEIYSARVVPKLLAGKPEGWNREHLWPRSYGLMHKPSLTDLHN 213
           +ILDAAD D PEAS  IVEIYS RVV K LAGKPEGWNREHLWPRSYGL+  PSLTDLHN
Sbjct: 127 KILDAADADNPEASLGIVEIYSLRVVSKGLAGKPEGWNREHLWPRSYGLIDHPSLTDLHN 186

Query: 214 IRPADANVNSSRGNKYFGECQVGLTHCMRPANKEAASDTETDMKIWAPPQRVRGDVARAV 273
           IRPAD NVNSSRGNKY+GEC V    C++PANKEAASDTETD + W PP +VRGD+ARA+
Sbjct: 187 IRPADVNVNSSRGNKYYGECGVKSNKCLKPANKEAASDTETDKEKWTPPLQVRGDIARAL 246

Query: 274 MYMAIRYGFHQPGEGPVLHLSDSPSMVKKKMGQLSIILKWNELDPPSKEEKARNERVCRL 333
           MYMA+ YGFHQPG GP L LSDSPS+  ++MG LS +L+WNE+DPPS+EEK RNER+C+L
Sbjct: 247 MYMAVGYGFHQPGGGPGLXLSDSPSIRNREMGLLSTLLEWNEIDPPSREEKLRNERICKL 306

Query: 334 YQHNRNPFVDHPEYANLIWNQSQKSSSN 362
           YQHNRNPFVDHPEYA+LIW Q+  S  N
Sbjct: 307 YQHNRNPFVDHPEYABLIWKQATPSQRN 334
[Close]
BLAST of Spo07176.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RBM2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_085140 PE=4 SV=1)

HSP 1 Score: 614.8 bits (1584), Expect = 7.200e-173
Identity = 296/296 (100.00%), Postives = 296/296 (100.00%), Query Frame = 1 

		  

Query: 82  MASCIIVVYLFVLSPEVNAQDHSSFPVRYACEDVKSYYASIDHLKGKALSRKLNSIIAGH 141
           MASCIIVVYLFVLSPEVNAQDHSSFPVRYACEDVKSYYASIDHLKGKALSRKLNSIIAGH
Sbjct: 1   MASCIIVVYLFVLSPEVNAQDHSSFPVRYACEDVKSYYASIDHLKGKALSRKLNSIIAGH 60

Query: 142 HSLSYKKVWDALEILDAADVDKPEASPVIVEIYSARVVPKLLAGKPEGWNREHLWPRSYG 201
           HSLSYKKVWDALEILDAADVDKPEASPVIVEIYSARVVPKLLAGKPEGWNREHLWPRSYG
Sbjct: 61  HSLSYKKVWDALEILDAADVDKPEASPVIVEIYSARVVPKLLAGKPEGWNREHLWPRSYG 120

Query: 202 LMHKPSLTDLHNIRPADANVNSSRGNKYFGECQVGLTHCMRPANKEAASDTETDMKIWAP 261
           LMHKPSLTDLHNIRPADANVNSSRGNKYFGECQVGLTHCMRPANKEAASDTETDMKIWAP
Sbjct: 121 LMHKPSLTDLHNIRPADANVNSSRGNKYFGECQVGLTHCMRPANKEAASDTETDMKIWAP 180

Query: 262 PQRVRGDVARAVMYMAIRYGFHQPGEGPVLHLSDSPSMVKKKMGQLSIILKWNELDPPSK 321
           PQRVRGDVARAVMYMAIRYGFHQPGEGPVLHLSDSPSMVKKKMGQLSIILKWNELDPPSK
Sbjct: 181 PQRVRGDVARAVMYMAIRYGFHQPGEGPVLHLSDSPSMVKKKMGQLSIILKWNELDPPSK 240

Query: 322 EEKARNERVCRLYQHNRNPFVDHPEYANLIWNQSQKSSSNTSKLWSSIQQLGLWKT 378
           EEKARNERVCRLYQHNRNPFVDHPEYANLIWNQSQKSSSNTSKLWSSIQQLGLWKT
Sbjct: 241 EEKARNERVCRLYQHNRNPFVDHPEYANLIWNQSQKSSSNTSKLWSSIQQLGLWKT 296
[Close]
BLAST of Spo07176.1 vs. UniProtKB/TrEMBL
Match: A0A0J8EJZ0_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g198270 PE=4 SV=1)

HSP 1 Score: 526.2 bits (1354), Expect = 3.400e-146
Identity = 265/366 (72.40%), Postives = 299/366 (81.69%), Query Frame = 1 

		  

Query: 11  PIITISTFPRIKTTHFQQIN-NKPTSIFSN-HYPQKQINCKKNCFYSTNFIFSSISRVFL 70
           P+ +ISTFP+IK T+FQQ N +K   I  N HYP K  N    C       FSS SR FL
Sbjct: 5   PLTSISTFPKIKATNFQQFNYDKFNYILPNYHYPLKIRNFSCCCTK-----FSSFSRRFL 64

Query: 71  KWTFSCFHGNLPKMASCIIVVYLFVLSPEVNAQDHSSFPVRYACEDVKSYYASIDHLKGK 130
            WT    HGNLP++AS +I +YL  L P+ NA+DHSSFP++YACEDVKSYYASI+ LKGK
Sbjct: 65  DWT--SVHGNLPRLASWLISLYLVFLCPDANAEDHSSFPIKYACEDVKSYYASINDLKGK 124

Query: 131 ALSRKLNSIIAGHHSLSYKKVWDALEILDAADVDKPEASPVIVEIYSARVVPKLLAGKPE 190
           ALSRKLNSIIAGHHSLSYK+VWDAL+ILDAAD+D+PEAS  IVEIYS R+VPK LAGKPE
Sbjct: 125 ALSRKLNSIIAGHHSLSYKEVWDALKILDAADLDEPEASSGIVEIYSGRIVPKGLAGKPE 184

Query: 191 GWNREHLWPRSYGLMHKPSLTDLHNIRPADANVNSSRGNKYFGECQVGLTHCMRPANKEA 250
           GWNREHLWPRSYG+   P LTDLHNIRPAD NVNSSRGNKYFGEC+VG THCM+PANKEA
Sbjct: 185 GWNREHLWPRSYGITRGPFLTDLHNIRPADVNVNSSRGNKYFGECRVGSTHCMKPANKEA 244

Query: 251 ASDTETDMKIWAPPQRVRGDVARAVMYMAIRYGFHQPGEGPVLHLSDSPSMVKKKMGQLS 310
           ASDTETD KIWAPP +VRGDVARAVMYMA+RYGFHQ  EGPVL LSDSPSMVKK+MG L+
Sbjct: 245 ASDTETDTKIWAPPYQVRGDVARAVMYMAVRYGFHQSAEGPVLRLSDSPSMVKKEMGLLT 304

Query: 311 IILKWNELDPPSKEEKARNERVCRLYQHNRNPFVDHPEYANLIWN---QSQKSSSNTSKL 370
            +L+WNELDPPS+EEK RNERVCRL+QHNRNPFVDHPEYANLIW     S + SS  SK 
Sbjct: 305 TLLEWNELDPPSQEEKLRNERVCRLFQHNRNPFVDHPEYANLIWKHAVSSHRRSSYISKP 363

Query: 371 WSSIQQ 372
            ++IQ+
Sbjct: 365 STTIQR 363
[Close]
BLAST of Spo07176.1 vs. UniProtKB/TrEMBL
Match: F6GXI4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0052g00520 PE=4 SV=1)

HSP 1 Score: 419.9 bits (1078), Expect = 3.400e-114
Identity = 197/281 (70.11%), Postives = 230/281 (81.85%), Query Frame = 1 

		  

Query: 81  KMASCIIVVYLFVLSPEVNAQDHSSFPVRYACEDVKSYYASIDHLKGKALSRKLNSIIAG 140
           + AS II ++LF  +    A DHSS  + Y CEDV SYYA ++HL+G+AL +KLNSII+ 
Sbjct: 11  RWASRIIFIFLFCFNFVAEAYDHSSLSLSYDCEDVSSYYAQVEHLEGEALKKKLNSIISE 70

Query: 141 HHSLSYKKVWDALEILDAADVDKPEASPVIVEIYSARVVPKLLAGKPEGWNREHLWPRSY 200
           H SLSYK+VW+AL+ILDAADVD PEAS  IVEIYS RVV K LAGKPEGWNREHLWPRSY
Sbjct: 71  HRSLSYKEVWNALKILDAADVDNPEASLGIVEIYSLRVVSKDLAGKPEGWNREHLWPRSY 130

Query: 201 GLMHKPSLTDLHNIRPADANVNSSRGNKYFGECQVGLTHCMRPANKEAASDTETDMKIWA 260
           GL+  PSLTDLHNIRPAD NVNSSRGNKY+GEC V    C++PANKEAASDTETD + W 
Sbjct: 131 GLIDHPSLTDLHNIRPADVNVNSSRGNKYYGECGVKSNKCLKPANKEAASDTETDKEKWT 190

Query: 261 PPQRVRGDVARAVMYMAIRYGFHQPGEGPVLHLSDSPSMVKKKMGQLSIILKWNELDPPS 320
           PP +VRGD+ARA+MYMA+ YGFHQPG GP L LSDSPS+  ++MG LS +L+WNE+DPPS
Sbjct: 191 PPLQVRGDIARALMYMAVGYGFHQPGGGPGLRLSDSPSIRNREMGLLSTLLEWNEIDPPS 250

Query: 321 KEEKARNERVCRLYQHNRNPFVDHPEYANLIWNQSQKSSSN 362
           +EEK RNER+C+LYQHNRNPFVDHPEYANLIW Q+  S  N
Sbjct: 251 REEKLRNERICKLYQHNRNPFVDHPEYANLIWKQATPSQRN 291
[Close]
BLAST of Spo07176.1 vs. UniProtKB/TrEMBL
Match: A5C2K2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_012634 PE=4 SV=1)

HSP 1 Score: 408.7 bits (1049), Expect = 7.800e-111
Identity = 190/268 (70.90%), Postives = 220/268 (82.09%), Query Frame = 1 

		  

Query: 94  LSPEVNAQDHSSFPVRYACEDVKSYYASIDHLKGKALSRKLNSIIAGHHSLSYKKVWDAL 153
           +S    A DHSS  + Y CEDV SYYA + HL+G+AL +KLNSII+ H SLSYK+VW+AL
Sbjct: 67  ISAVTXAYDHSSLSLSYDCEDVSSYYAQVGHLEGEALKKKLNSIISEHRSLSYKEVWNAL 126

Query: 154 EILDAADVDKPEASPVIVEIYSARVVPKLLAGKPEGWNREHLWPRSYGLMHKPSLTDLHN 213
           +ILDAAD D PEAS  IVEIYS RVV K LAGKPEGWNREHLWPRSYGL+  PSLTDLHN
Sbjct: 127 KILDAADADNPEASLGIVEIYSLRVVSKGLAGKPEGWNREHLWPRSYGLIDHPSLTDLHN 186

Query: 214 IRPADANVNSSRGNKYFGECQVGLTHCMRPANKEAASDTETDMKIWAPPQRVRGDVARAV 273
           IRPAD NVNSSRGNKY+GEC V    C++PANKEAASDTETD + W PP +VRGD+ARA+
Sbjct: 187 IRPADVNVNSSRGNKYYGECGVKSNKCLKPANKEAASDTETDKEKWTPPLQVRGDIARAL 246

Query: 274 MYMAIRYGFHQPGEGPVLHLSDSPSMVKKKMGQLSIILKWNELDPPSKEEKARNERVCRL 333
           MYMA+ YGFHQPG GP L LSDSPS+  ++MG LS +L+WNE+DPPS+EEK RNER+C+L
Sbjct: 247 MYMAVGYGFHQPGGGPGLXLSDSPSIRNREMGLLSTLLEWNEIDPPSREEKLRNERICKL 306

Query: 334 YQHNRNPFVDHPEYANLIWNQSQKSSSN 362
           YQHNRNPFVDHPEYA+LIW Q+  S  N
Sbjct: 307 YQHNRNPFVDHPEYABLIWKQATPSQRN 334
[Close]
BLAST of Spo07176.1 vs. UniProtKB/TrEMBL
Match: G7JT80_MEDTR (EndA/NucM family nuclease OS=Medicago truncatula GN=MTR_4g126910 PE=4 SV=2)

HSP 1 Score: 397.1 bits (1019), Expect = 2.300e-107
Identity = 186/284 (65.49%), Postives = 221/284 (77.82%), Query Frame = 1 

		  

Query: 73  SCFHGNLPKMASCIIVVYLFVLSPEVNAQDHSSFPVRYACEDVKSYYASIDH--LKGKAL 132
           +CFH +     S ++  YL +    V        P  Y+CEDV +YY+ + H  LKG+ L
Sbjct: 63  TCFHFSWKCFFSRLVSFYLLLSLNLVAVASEYPTPSTYSCEDVANYYSPLKHFRLKGEKL 122

Query: 133 SRKLNSIIAGHHSLSYKKVWDALEILDAADVDKPEASPVIVEIYSARVVPKLLAGKPEGW 192
            RKLNSIIA HHSLSY++VWDAL++LDAAD+DKPEAS  IVEIYS RVVPK L+GKPEGW
Sbjct: 123 KRKLNSIIAPHHSLSYQEVWDALKVLDAADIDKPEASLGIVEIYSLRVVPKWLSGKPEGW 182

Query: 193 NREHLWPRSYGLMHKPSLTDLHNIRPADANVNSSRGNKYFGECQVGLTHCMRPANKEAAS 252
           NREHLWPRSYGL   PSLTDLHNIRPAD NVNSSRGNKY+GEC  G T C+RPANKEAA 
Sbjct: 183 NREHLWPRSYGLTTVPSLTDLHNIRPADVNVNSSRGNKYYGECITGSTKCLRPANKEAAL 242

Query: 253 DTETDMKIWAPPQRVRGDVARAVMYMAIRYGFHQPGEGPVLHLSDSPSMVKKKMGQLSII 312
           DTE D + WAPP+ VRGD+ARA+MYMA+ YGF QPG  P L LSD+P++  ++MG LS +
Sbjct: 243 DTEADKRRWAPPKEVRGDIARALMYMAVCYGFPQPGGSPGLRLSDTPNVENREMGLLSTL 302

Query: 313 LKWNELDPPSKEEKARNERVCRLYQHNRNPFVDHPEYANLIWNQ 355
           L+WNE+DPPS+EEK RNER+C+ YQHNRNPFVDHPEY NL+W Q
Sbjct: 303 LEWNEVDPPSREEKLRNERICKFYQHNRNPFVDHPEYVNLVWKQ 346
[Close]
BLAST of Spo07176.1 vs. ExPASy Swiss-Prot
Match: BSN1_BACAM (Extracellular ribonuclease OS=Bacillus amyloliquefaciens GN=bsn PE=1 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 2.700e-40
Identity = 100/245 (40.82%), Postives = 138/245 (56.33%), Query Frame = 1 

		  

Query: 114 DVKSYYASIDHLKGKALSRKLNSIIAGHHSLSYKKVWDALEILDAADVDKPEASP-VIVE 173
           D ++YY       G AL   L+ II+GH  LSY +VW+AL+     + D+  A+P  ++ 
Sbjct: 62  DTETYYKEASGKSGTALKSALHRIISGHTKLSYSQVWNALK-----ETDEDPANPNNVIL 121

Query: 174 IYSARVVPKLLAGKPEG-WNREHLWPRSYGLMHKPS--LTDLHNIRPADANVNSSRGNKY 233
           +Y+     K   G   G WNREH+W +S+G     +   TD+H++RPAD  VNS+RGN  
Sbjct: 122 LYTQESRAKSKNGGSVGDWNREHVWAKSHGNFGTAAGPGTDIHHLRPADVQVNSARGNMD 181

Query: 234 FGECQVGLTHCMRPANKEAASDTETDMKIWAPPQRVRGDVARAVMYMAIRYGFHQPGEG- 293
           F     G  +   P N         D   W P   V+GDVAR + YMA+RY   + G+G 
Sbjct: 182 FD--NGGSEYPKAPGN-------YYDGDSWEPRDEVKGDVARMLFYMAVRY---EGGDGY 241

Query: 294 PVLHLSDSPSMVKKK-MGQLSIILKWNELDPPSKEEKARNERVCRLYQHNRNPFVDHPEY 353
           P L L+D         MG+LS++LKWN+ DP   +EK RNE +   YQHNRNPF+DHPE+
Sbjct: 242 PDLELNDKTGNGSAPYMGKLSVLLKWNKQDPVDSKEKRRNEIIYEDYQHNRNPFIDHPEW 289
[Close]
BLAST of Spo07176.1 vs. ExPASy Swiss-Prot
Match: BSN2_BACSU (Extracellular ribonuclease OS=Bacillus subtilis (strain 168) GN=bsn PE=3 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 2.200e-37
Identity = 95/244 (38.93%), Postives = 132/244 (54.10%), Query Frame = 1 

		  

Query: 114 DVKSYYASIDHLKGKALSRKLNSIIAGHHSLSYKKVWDALEILDAADVDKPEASPVIVEI 173
           D  +YY   +   G +L   L+ II+GH  LSY +VW+AL+  D    + P     ++ +
Sbjct: 60  DTDTYYEGAEGKTGDSLKSTLHRIISGHTMLSYSEVWNALKETD----EDPRNPNNVILL 119

Query: 174 YSARVVPKLLAGKPEG-WNREHLWPRSYGLM--HKPSLTDLHNIRPADANVNSSRGNKYF 233
           Y+     K L G   G WNREH+W +S+G     K   TD+H++RPAD  VNS+RGN  F
Sbjct: 120 YTNESRSKNLNGGNVGDWNREHVWAKSHGDFGTSKGPGTDIHHLRPADVQVNSARGNMDF 179

Query: 234 GECQVGLTHCMRPANKEAASDTETDMKIWAPPQRVRGDVARAVMYMAIRYGFHQPGEG-P 293
                G  +   P N         D   W P   V+GDVAR + YMA+RY   +  +G P
Sbjct: 180 DNG--GTEYAKAPGNYY-------DGDSWEPRDDVKGDVARMLFYMAVRY---EGDDGYP 239

Query: 294 VLHLSDSPSMVKKKM-GQLSIILKWNELDPPSKEEKARNERVCRLYQHNRNPFVDHPEYA 353
            L L+D          G+ S++L+WN+ DP    E+ RNE +   YQHNRNPF+DHPE+A
Sbjct: 240 DLELNDKTGNGSAPYHGKQSVLLEWNKQDPVDDRERKRNEIIYEKYQHNRNPFIDHPEWA 287
[Close]
BLAST of Spo07176.1 vs. ExPASy Swiss-Prot
Match: NUCM_DICD3 (Nuclease NucM OS=Dickeya dadantii (strain 3937) GN=nucM PE=2 SV=2)

HSP 1 Score: 54.3 bits (129), Expect = 3.400e-6
Identity = 41/136 (30.15%), Postives = 59/136 (43.38%), Query Frame = 1 

		  

Query: 209 TDLHNIRPADANVNSSRGNKYFGECQVGLTHCMRPANKEAASDTETDMK--IWAPPQRVR 268
           TDLHN++PA   VN  RGN  + +   G         +    + + D K  +  PP+R R
Sbjct: 117 TDLHNLQPAIGEVNGDRGNFMYSQWNGG-------ERQYGQCEMKIDFKSQLAEPPERAR 176

Query: 269 GDVARAVMYMAIRYGFHQPGEGPVLHLSDSPSMVKKKMGQLSIILKWNELDPPSKEEKAR 328
           G +AR   YM  RY          L+LS           Q  +   WN+  P +  E  R
Sbjct: 177 GAIARTYFYMRDRYN---------LNLSRQ---------QTQLFDAWNKQYPATTWECTR 226

Query: 329 NERVCRLYQHNRNPFV 343
            +R+  + Q N NP+V
Sbjct: 237 EKRIAAV-QGNHNPYV 226
The following BLAST results are available for this feature:
BLAST of Spo07176.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902212125|gb|KNA16885.1|1.0e-172100.hypothetical protein SOVF_0851... [more]
gi|731354174|ref|XP_010688441.1|4.8e-14672.4PREDICTED: uncharacterized pro... [more]
gi|297735431|emb|CBI17871.3|1.7e-11468.9unnamed protein product [Vitis... [more]
gi|731408620|ref|XP_010656923.1|1.3e-11172.3PREDICTED: uncharacterized pro... [more]
gi|147855531|emb|CAN79602.1|1.1e-11070.9hypothetical protein VITISV_01... [more]
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BLAST of Spo07176.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RBM2_SPIOL7.2e-173100.Uncharacterized protein OS=Spi... [more]
A0A0J8EJZ0_BETVU3.4e-14672.4Uncharacterized protein OS=Bet... [more]
F6GXI4_VITVI3.4e-11470.1Putative uncharacterized prote... [more]
A5C2K2_VITVI7.8e-11170.9Putative uncharacterized prote... [more]
G7JT80_MEDTR2.3e-10765.4EndA/NucM family nuclease OS=M... [more]
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BLAST of Spo07176.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
BSN1_BACAM2.7e-4040.8Extracellular ribonuclease OS=... [more]
BSN2_BACSU2.2e-3738.9Extracellular ribonuclease OS=... [more]
NUCM_DICD33.4e-630.1Nuclease NucM OS=Dickeya dadan... [more]
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BLAST of Spo07176.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007346Endonuclease IPFAMPF04231Endonuclease_1coord: 128..346
score: 1.1
NoneNo IPR availablePANTHERPTHR33607FAMILY NOT NAMEDcoord: 86..360
score: 2.2
NoneNo IPR availablePANTHERPTHR33607:SF2ENDONUCLEASE-1coord: 86..360
score: 2.2
NoneNo IPR availableunknownSSF54060His-Me finger endonucleasescoord: 126..346
score: 1.18

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0090305 nucleic acid phosphodiester bond hydrolysis
biological_process GO:0010239 chloroplast mRNA processing
biological_process GO:0045910 negative regulation of DNA recombination
biological_process GO:0006298 mismatch repair
biological_process GO:0008610 lipid biosynthetic process
biological_process GO:0044255 cellular lipid metabolic process
biological_process GO:0044249 cellular biosynthetic process
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0009658 chloroplast organization
biological_process GO:0009965 leaf morphogenesis
biological_process GO:0045036 protein targeting to chloroplast
biological_process GO:0016226 iron-sulfur cluster assembly
biological_process GO:0035265 organ growth
biological_process GO:0032984 protein-containing complex disassembly
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0042793 plastid transcription
biological_process GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process GO:0009793 embryo development ending in seed dormancy
cellular_component GO:0009536 plastid
cellular_component GO:0016020 membrane
cellular_component GO:0009537 proplastid
cellular_component GO:0009507 chloroplast
cellular_component GO:0009513 etioplast
cellular_component GO:0009509 chromoplast
cellular_component GO:0009501 amyloplast
molecular_function GO:0005515 protein binding
molecular_function GO:0004518 nuclease activity
molecular_function GO:0003723 RNA binding
molecular_function GO:0005525 GTP binding
molecular_function GO:0016887 ATPase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0030983 mismatched DNA binding
RNA-Seq Expression