Spo07116 (gene)

Overview
NameSpo07116
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionNAD(P)H-quinone oxidoreductase subunit K, chloroplastic (1.6.5.-) (NAD(P)H dehydrogenase subunit K) (NADH-plastoquinone oxidoreductase subunit K)
LocationSpoScf_11714 : 695 .. 1129 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGAAAAGGAGCATTGGAATGGTCTTAATTCCCGAAGATTCCGACAAAAAAAAGAAGATTGAAACAGTTATGAATTCCATTGAGTTTCCACTGCTTGATCAAATAGCCCAAAATTCTGTTATTTCAACTACATCAAACGATCTTTCAAATTGGTCAAGACTCTCAAGTTTATGGCCGCTTCTCTACGGTACCAGCTGTTGCTTCATTGAATTTGCTTCATTAATAGGCTCACGATTTGACTTTGATCGTTATGGACTCGTACCAAGAGCGAGCCCTAGACAAGCGGACCTAATTTTAACAGCCGGTACCGTAACAATGAAAATGGCGCCTTCCTTATTGAGATTATATGAGCAAATGCCTGAACCAAAATATGTTATTGCTATGGGAGCATGTACAATTACAGGGGGGGATGTTCAGTACCGATTCTTATAG

mRNA sequence

ATGGCGAAAAGGAGCATTGGAATGGTCTTAATTCCCGAAGATTCCGACAAAAAAAAGAAGATTGAAACAGTTATGAATTCCATTGAGTTTCCACTGCTTGATCAAATAGCCCAAAATTCTGTTATTTCAACTACATCAAACGATCTTTCAAATTGGTCAAGACTCTCAAGTTTATGGCCGCTTCTCTACGGCTCACGATTTGACTTTGATCGTTATGGACTCGTACCAAGAGCGAGCCCTAGACAAGCGGACCTAATTTTAACAGCCGGTACCGTAACAATGAAAATGGCGCCTTCCTTATTGAGATTATATGAGCAAATGCCTGAACCAAAATATGTTATTGCTATGGGAGCATGTACAATTACAGGGGGGGATGTTCAGTACCGATTCTTATAG

Coding sequence (CDS)

ATGGCGAAAAGGAGCATTGGAATGGTCTTAATTCCCGAAGATTCCGACAAAAAAAAGAAGATTGAAACAGTTATGAATTCCATTGAGTTTCCACTGCTTGATCAAATAGCCCAAAATTCTGTTATTTCAACTACATCAAACGATCTTTCAAATTGGTCAAGACTCTCAAGTTTATGGCCGCTTCTCTACGGCTCACGATTTGACTTTGATCGTTATGGACTCGTACCAAGAGCGAGCCCTAGACAAGCGGACCTAATTTTAACAGCCGGTACCGTAACAATGAAAATGGCGCCTTCCTTATTGAGATTATATGAGCAAATGCCTGAACCAAAATATGTTATTGCTATGGGAGCATGTACAATTACAGGGGGGGATGTTCAGTACCGATTCTTATAG

Protein sequence

MAKRSIGMVLIPEDSDKKKKIETVMNSIEFPLLDQIAQNSVISTTSNDLSNWSRLSSLWPLLYGSRFDFDRYGLVPRASPRQADLILTAGTVTMKMAPSLLRLYEQMPEPKYVIAMGACTITGGDVQYRFL
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo07116.1Spo07116.1mRNA


Homology
[Close]
BLAST of Spo07116.1 vs. NCBI nr
Match: gi|7636113|emb|CAB88733.1| (NADH dehydrogenase 32kDa subunit (chloroplast) [Spinacia oleracea])

HSP 1 Score: 238.0 bits (606), Expect = 9.100e-60
Identity = 124/137 (90.51%), Postives = 124/137 (90.51%), Query Frame = 1 

		  

Query: 1   MAKRSIGMVLIPEDSDKKKKIETVMNSIEFPLLDQIAQNSVISTTSNDLSNWSRLSSLWP 60
           MAKRSIGMVLIPEDSDKKKKIETVMNSIEFPLLDQIAQNSVISTTSNDLSNWSRLSSLWP
Sbjct: 31  MAKRSIGMVLIPEDSDKKKKIETVMNSIEFPLLDQIAQNSVISTTSNDLSNWSRLSSLWP 90

Query: 61  LLY-------------GSRFDFDRYGLVPRASPRQADLILTAGTVTMKMAPSLLRLYEQM 120
           LLY             GSRFDFDRYGLVPRASPRQADLILTAGTVTMKMAPSLLRLYEQM
Sbjct: 91  LLYGTSCCFIEFASLIGSRFDFDRYGLVPRASPRQADLILTAGTVTMKMAPSLLRLYEQM 150

Query: 121 PEPKYVIAMGACTITGG 125
           PEPKYVIAMGACTITGG
Sbjct: 151 PEPKYVIAMGACTITGG 167
[Close]
BLAST of Spo07116.1 vs. NCBI nr
Match: gi|377580892|gb|AFB70584.1| (NADH dehydrogenase subunit K, partial (chloroplast) [Didierea madagascariensis])

HSP 1 Score: 221.5 bits (563), Expect = 8.800e-55
Identity = 118/141 (83.69%), Postives = 121/141 (85.82%), Query Frame = 1 

		  

Query: 1   MAKRSIGMVLIPEDSD----KKKKIETVMNSIEFPLLDQIAQNSVISTTSNDLSNWSRLS 60
           MAKRSIGMVLIPE SD    KK KIETVMNSIEFPLLD+I QNSVISTTSNDLSNWSRLS
Sbjct: 31  MAKRSIGMVLIPEYSDNKMKKKNKIETVMNSIEFPLLDRITQNSVISTTSNDLSNWSRLS 90

Query: 61  SLWPLLY-------------GSRFDFDRYGLVPRASPRQADLILTAGTVTMKMAPSLLRL 120
           SLWPLLY             GSRFDFDRYGLVPR+SPRQADLILTAGTVTMKMAPSL+RL
Sbjct: 91  SLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRL 150

Query: 121 YEQMPEPKYVIAMGACTITGG 125
           YEQMPEPKYVIAMGACTITGG
Sbjct: 151 YEQMPEPKYVIAMGACTITGG 171
[Close]
BLAST of Spo07116.1 vs. NCBI nr
Match: gi|377580896|gb|AFB70586.1| (NADH dehydrogenase subunit K, partial (chloroplast) [Mollugo verticillata])

HSP 1 Score: 221.1 bits (562), Expect = 1.100e-54
Identity = 118/142 (83.10%), Postives = 121/142 (85.21%), Query Frame = 1 

		  

Query: 1   MAKRSIGMVLIPEDSD-----KKKKIETVMNSIEFPLLDQIAQNSVISTTSNDLSNWSRL 60
           MAKRSIGMVLIPE SD     KK KIETVMNSIEFPLLD+I QNSVISTTSNDLSNWSRL
Sbjct: 31  MAKRSIGMVLIPEYSDNKMTKKKNKIETVMNSIEFPLLDRITQNSVISTTSNDLSNWSRL 90

Query: 61  SSLWPLLY-------------GSRFDFDRYGLVPRASPRQADLILTAGTVTMKMAPSLLR 120
           SSLWPLLY             GSRFDFDRYGLVPR+SPRQADLILTAGTVTMKMAPSL+R
Sbjct: 91  SSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVR 150

Query: 121 LYEQMPEPKYVIAMGACTITGG 125
           LYEQMPEPKYVIAMGACTITGG
Sbjct: 151 LYEQMPEPKYVIAMGACTITGG 172
[Close]
BLAST of Spo07116.1 vs. NCBI nr
Match: gi|377580904|gb|AFB70590.1| (NADH dehydrogenase subunit K, partial (chloroplast) [Portulaca oleracea])

HSP 1 Score: 218.4 bits (555), Expect = 7.500e-54
Identity = 117/142 (82.39%), Postives = 120/142 (84.51%), Query Frame = 1 

		  

Query: 1   MAKRSIGMVLIPEDSD-----KKKKIETVMNSIEFPLLDQIAQNSVISTTSNDLSNWSRL 60
           MAKRSIGMVLIPE SD     KK KIETVMNSIEFPLL +I QNSVISTTSNDLSNWSRL
Sbjct: 31  MAKRSIGMVLIPEYSDNKMKKKKNKIETVMNSIEFPLLTRITQNSVISTTSNDLSNWSRL 90

Query: 61  SSLWPLLY-------------GSRFDFDRYGLVPRASPRQADLILTAGTVTMKMAPSLLR 120
           SSLWPLLY             GSRFDFDRYGLVPR+SPRQADLILTAGTVTMKMAPSL+R
Sbjct: 91  SSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVR 150

Query: 121 LYEQMPEPKYVIAMGACTITGG 125
           LYEQMPEPKYVIAMGACTITGG
Sbjct: 151 LYEQMPEPKYVIAMGACTITGG 172
[Close]
BLAST of Spo07116.1 vs. NCBI nr
Match: gi|377580902|gb|AFB70589.1| (NADH dehydrogenase subunit K, partial (chloroplast) [Pereskiopsis diguetii])

HSP 1 Score: 217.6 bits (553), Expect = 1.300e-53
Identity = 116/142 (81.69%), Postives = 119/142 (83.80%), Query Frame = 1 

		  

Query: 1   MAKRSIGMVLIPEDSDKKKK-----IETVMNSIEFPLLDQIAQNSVISTTSNDLSNWSRL 60
           MAKRSIGMVLIPE SD K K     IETVMNSIEFPLLD+I QNSVISTTSNDLSNWSRL
Sbjct: 31  MAKRSIGMVLIPEYSDNKMKKKTNQIETVMNSIEFPLLDRITQNSVISTTSNDLSNWSRL 90

Query: 61  SSLWPLLY-------------GSRFDFDRYGLVPRASPRQADLILTAGTVTMKMAPSLLR 120
           SSLWPLLY             GSRFDFDRYGLVPR SPRQADLILTAGTVTMKMAPSL+R
Sbjct: 91  SSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRPSPRQADLILTAGTVTMKMAPSLVR 150

Query: 121 LYEQMPEPKYVIAMGACTITGG 125
           LYEQMPEPKY+IAMGACTITGG
Sbjct: 151 LYEQMPEPKYIIAMGACTITGG 172
[Close]
BLAST of Spo07116.1 vs. UniProtKB/TrEMBL
Match: H6T8Q8_9CARY (NADH dehydrogenase subunit K (Fragment) OS=Didierea madagascariensis GN=ndhK PE=3 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 6.100e-55
Identity = 118/141 (83.69%), Postives = 121/141 (85.82%), Query Frame = 1 

		  

Query: 1   MAKRSIGMVLIPEDSD----KKKKIETVMNSIEFPLLDQIAQNSVISTTSNDLSNWSRLS 60
           MAKRSIGMVLIPE SD    KK KIETVMNSIEFPLLD+I QNSVISTTSNDLSNWSRLS
Sbjct: 31  MAKRSIGMVLIPEYSDNKMKKKNKIETVMNSIEFPLLDRITQNSVISTTSNDLSNWSRLS 90

Query: 61  SLWPLLY-------------GSRFDFDRYGLVPRASPRQADLILTAGTVTMKMAPSLLRL 120
           SLWPLLY             GSRFDFDRYGLVPR+SPRQADLILTAGTVTMKMAPSL+RL
Sbjct: 91  SLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRL 150

Query: 121 YEQMPEPKYVIAMGACTITGG 125
           YEQMPEPKYVIAMGACTITGG
Sbjct: 151 YEQMPEPKYVIAMGACTITGG 171
[Close]
BLAST of Spo07116.1 vs. UniProtKB/TrEMBL
Match: H6T8R0_MOLVE (NADH dehydrogenase subunit K (Fragment) OS=Mollugo verticillata GN=ndhK PE=3 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 8.000e-55
Identity = 118/142 (83.10%), Postives = 121/142 (85.21%), Query Frame = 1 

		  

Query: 1   MAKRSIGMVLIPEDSD-----KKKKIETVMNSIEFPLLDQIAQNSVISTTSNDLSNWSRL 60
           MAKRSIGMVLIPE SD     KK KIETVMNSIEFPLLD+I QNSVISTTSNDLSNWSRL
Sbjct: 31  MAKRSIGMVLIPEYSDNKMTKKKNKIETVMNSIEFPLLDRITQNSVISTTSNDLSNWSRL 90

Query: 61  SSLWPLLY-------------GSRFDFDRYGLVPRASPRQADLILTAGTVTMKMAPSLLR 120
           SSLWPLLY             GSRFDFDRYGLVPR+SPRQADLILTAGTVTMKMAPSL+R
Sbjct: 91  SSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVR 150

Query: 121 LYEQMPEPKYVIAMGACTITGG 125
           LYEQMPEPKYVIAMGACTITGG
Sbjct: 151 LYEQMPEPKYVIAMGACTITGG 172
[Close]
BLAST of Spo07116.1 vs. UniProtKB/TrEMBL
Match: H6T8R4_POROL (NADH dehydrogenase subunit K (Fragment) OS=Portulaca oleracea GN=ndhK PE=3 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 5.200e-54
Identity = 117/142 (82.39%), Postives = 120/142 (84.51%), Query Frame = 1 

		  

Query: 1   MAKRSIGMVLIPEDSD-----KKKKIETVMNSIEFPLLDQIAQNSVISTTSNDLSNWSRL 60
           MAKRSIGMVLIPE SD     KK KIETVMNSIEFPLL +I QNSVISTTSNDLSNWSRL
Sbjct: 31  MAKRSIGMVLIPEYSDNKMKKKKNKIETVMNSIEFPLLTRITQNSVISTTSNDLSNWSRL 90

Query: 61  SSLWPLLY-------------GSRFDFDRYGLVPRASPRQADLILTAGTVTMKMAPSLLR 120
           SSLWPLLY             GSRFDFDRYGLVPR+SPRQADLILTAGTVTMKMAPSL+R
Sbjct: 91  SSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVR 150

Query: 121 LYEQMPEPKYVIAMGACTITGG 125
           LYEQMPEPKYVIAMGACTITGG
Sbjct: 151 LYEQMPEPKYVIAMGACTITGG 172
[Close]
BLAST of Spo07116.1 vs. UniProtKB/TrEMBL
Match: H6T8R3_9CARY (NADH dehydrogenase subunit K (Fragment) OS=Pereskiopsis diguetii GN=ndhK PE=3 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 8.900e-54
Identity = 116/142 (81.69%), Postives = 119/142 (83.80%), Query Frame = 1 

		  

Query: 1   MAKRSIGMVLIPEDSDKKKK-----IETVMNSIEFPLLDQIAQNSVISTTSNDLSNWSRL 60
           MAKRSIGMVLIPE SD K K     IETVMNSIEFPLLD+I QNSVISTTSNDLSNWSRL
Sbjct: 31  MAKRSIGMVLIPEYSDNKMKKKTNQIETVMNSIEFPLLDRITQNSVISTTSNDLSNWSRL 90

Query: 61  SSLWPLLY-------------GSRFDFDRYGLVPRASPRQADLILTAGTVTMKMAPSLLR 120
           SSLWPLLY             GSRFDFDRYGLVPR SPRQADLILTAGTVTMKMAPSL+R
Sbjct: 91  SSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRPSPRQADLILTAGTVTMKMAPSLVR 150

Query: 121 LYEQMPEPKYVIAMGACTITGG 125
           LYEQMPEPKY+IAMGACTITGG
Sbjct: 151 LYEQMPEPKYIIAMGACTITGG 172
[Close]
BLAST of Spo07116.1 vs. UniProtKB/TrEMBL
Match: V5JE35_LIQFO (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Liquidambar formosana GN=ndhK PE=3 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 1.500e-53
Identity = 116/143 (81.12%), Postives = 119/143 (83.22%), Query Frame = 1 

		  

Query: 1   MAKRSIGMVLIPEDSDKKKK------IETVMNSIEFPLLDQIAQNSVISTTSNDLSNWSR 60
           MAKRSIGMVL PE SD KKK      IETVMNSIEFPLLD+  QNSVISTTSNDLSNWSR
Sbjct: 31  MAKRSIGMVLAPEYSDNKKKKGTKNKIETVMNSIEFPLLDRTTQNSVISTTSNDLSNWSR 90

Query: 61  LSSLWPLLY-------------GSRFDFDRYGLVPRASPRQADLILTAGTVTMKMAPSLL 120
           LSSLWPLLY             GSRFDFDRYGLVPR+SPRQADLILTAGTVTMKMAPSL+
Sbjct: 91  LSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLV 150

Query: 121 RLYEQMPEPKYVIAMGACTITGG 125
           RLYEQMPEPKYVIAMGACTITGG
Sbjct: 151 RLYEQMPEPKYVIAMGACTITGG 173
[Close]
BLAST of Spo07116.1 vs. ExPASy Swiss-Prot
Match: NDHK_SPIOL (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Spinacia oleracea GN=ndhK PE=3 SV=3)

HSP 1 Score: 193.7 bits (491), Expect = 1.200e-48
Identity = 100/113 (88.50%), Postives = 100/113 (88.50%), Query Frame = 1 

		  

Query: 25  MNSIEFPLLDQIAQNSVISTTSNDLSNWSRLSSLWPLLY-------------GSRFDFDR 84
           MNSIEFPLLDQIAQNSVISTTSNDLSNWSRLSSLWPLLY             GSRFDFDR
Sbjct: 1   MNSIEFPLLDQIAQNSVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDR 60

Query: 85  YGLVPRASPRQADLILTAGTVTMKMAPSLLRLYEQMPEPKYVIAMGACTITGG 125
           YGLVPRASPRQADLILTAGTVTMKMAPSLLRLYEQMPEPKYVIAMGACTITGG
Sbjct: 61  YGLVPRASPRQADLILTAGTVTMKMAPSLLRLYEQMPEPKYVIAMGACTITGG 113
[Close]
BLAST of Spo07116.1 vs. ExPASy Swiss-Prot
Match: NDHK_NANDO (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Nandina domestica GN=ndhK PE=3 SV=2)

HSP 1 Score: 188.3 bits (477), Expect = 5.200e-47
Identity = 96/113 (84.96%), Postives = 99/113 (87.61%), Query Frame = 1 

		  

Query: 25  MNSIEFPLLDQIAQNSVISTTSNDLSNWSRLSSLWPLLY-------------GSRFDFDR 84
           MNSIEFPLLD+I QNSVISTTSNDLSNWSRLSSLWPLLY             GSRFDFDR
Sbjct: 1   MNSIEFPLLDRITQNSVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDR 60

Query: 85  YGLVPRASPRQADLILTAGTVTMKMAPSLLRLYEQMPEPKYVIAMGACTITGG 125
           YGLVPR+SPRQADLILTAGTVTMKMAPSL+RLYEQMPEPKYVIAMGACTITGG
Sbjct: 61  YGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGG 113
[Close]
BLAST of Spo07116.1 vs. ExPASy Swiss-Prot
Match: NDHK_VITVI (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Vitis vinifera GN=ndhK PE=3 SV=2)

HSP 1 Score: 186.4 bits (472), Expect = 2.000e-46
Identity = 95/113 (84.07%), Postives = 98/113 (86.73%), Query Frame = 1 

		  

Query: 25  MNSIEFPLLDQIAQNSVISTTSNDLSNWSRLSSLWPLLY-------------GSRFDFDR 84
           MNSIEFPLLD+  QNSVISTTSNDLSNWSRLSSLWPLLY             GSRFDFDR
Sbjct: 1   MNSIEFPLLDRTTQNSVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDR 60

Query: 85  YGLVPRASPRQADLILTAGTVTMKMAPSLLRLYEQMPEPKYVIAMGACTITGG 125
           YGLVPR+SPRQADLILTAGTVTMKMAPSL+RLYEQMPEPKYVIAMGACTITGG
Sbjct: 61  YGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGG 113
[Close]
BLAST of Spo07116.1 vs. ExPASy Swiss-Prot
Match: NDHK_DRIGR (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Drimys granadensis GN=ndhK PE=3 SV=2)

HSP 1 Score: 186.4 bits (472), Expect = 2.000e-46
Identity = 95/113 (84.07%), Postives = 98/113 (86.73%), Query Frame = 1 

		  

Query: 25  MNSIEFPLLDQIAQNSVISTTSNDLSNWSRLSSLWPLLY-------------GSRFDFDR 84
           MNSIEFPLLD+  QNSVISTTSNDLSNWSRLSSLWPLLY             GSRFDFDR
Sbjct: 1   MNSIEFPLLDRTTQNSVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDR 60

Query: 85  YGLVPRASPRQADLILTAGTVTMKMAPSLLRLYEQMPEPKYVIAMGACTITGG 125
           YGLVPR+SPRQADLILTAGTVTMKMAPSL+RLYEQMPEPKYVIAMGACTITGG
Sbjct: 61  YGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGG 113
[Close]
BLAST of Spo07116.1 vs. ExPASy Swiss-Prot
Match: NDHK_LIRTU (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Liriodendron tulipifera GN=ndhK PE=3 SV=2)

HSP 1 Score: 186.4 bits (472), Expect = 2.000e-46
Identity = 95/113 (84.07%), Postives = 98/113 (86.73%), Query Frame = 1 

		  

Query: 25  MNSIEFPLLDQIAQNSVISTTSNDLSNWSRLSSLWPLLY-------------GSRFDFDR 84
           MNSIEFPLLD+  QNSVISTTSNDLSNWSRLSSLWPLLY             GSRFDFDR
Sbjct: 1   MNSIEFPLLDRTTQNSVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDR 60

Query: 85  YGLVPRASPRQADLILTAGTVTMKMAPSLLRLYEQMPEPKYVIAMGACTITGG 125
           YGLVPR+SPRQADLILTAGTVTMKMAPSL+RLYEQMPEPKYVIAMGACTITGG
Sbjct: 61  YGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGG 113
[Close]
BLAST of Spo07116.1 vs. TAIR (Arabidopsis)
Match: ATCG00430.1 (photosystem II reaction center protein G)

HSP 1 Score: 180.3 bits (456), Expect = 7.900e-46
Identity = 91/113 (80.53%), Postives = 97/113 (85.84%), Query Frame = 1 

		  

Query: 25  MNSIEFPLLDQIAQNSVISTTSNDLSNWSRLSSLWPLLY-------------GSRFDFDR 84
           MNSI+FP+LD+  +NSVISTT NDLSNWSRLSSLWPLLY             GSRFDFDR
Sbjct: 1   MNSIKFPILDRTTKNSVISTTLNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDR 60

Query: 85  YGLVPRASPRQADLILTAGTVTMKMAPSLLRLYEQMPEPKYVIAMGACTITGG 125
           YGLVPR+SPRQADLILTAGTVTMKMAPSL+RLYEQMPEPKYVIAMGACTITGG
Sbjct: 61  YGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGG 113
[Close]
BLAST of Spo07116.1 vs. TAIR (Arabidopsis)
Match: AT5G11770.1 (NADH-ubiquinone oxidoreductase 20 kDa subunit, mitochondrial)

HSP 1 Score: 99.4 bits (246), Expect = 1.800e-21
Identity = 43/97 (44.33%), Postives = 66/97 (68.04%), Query Frame = 1 

		  

Query: 47  NDLSNWSRLSSLWPLLYG-------------SRFDFDRYGLVPRASPRQADLILTAGTVT 106
           +DL NW+R  S+WP+ +G             +R+D DR+G++ R SPRQ+D ++ AGT+T
Sbjct: 73  DDLMNWARTGSIWPMTFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDCMIVAGTLT 132

Query: 107 MKMAPSLLRLYEQMPEPKYVIAMGACTITGGDVQYRF 131
            KMAP+L ++Y+QMPEP++VI+MG+C   GG   Y +
Sbjct: 133 NKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSY 169
The following BLAST results are available for this feature:
BLAST of Spo07116.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|7636113|emb|CAB88733.1|9.1e-6090.5NADH dehydrogenase 32kDa subun... [more]
gi|377580892|gb|AFB70584.1|8.8e-5583.6NADH dehydrogenase subunit K, ... [more]
gi|377580896|gb|AFB70586.1|1.1e-5483.1NADH dehydrogenase subunit K, ... [more]
gi|377580904|gb|AFB70590.1|7.5e-5482.3NADH dehydrogenase subunit K, ... [more]
gi|377580902|gb|AFB70589.1|1.3e-5381.6NADH dehydrogenase subunit K, ... [more]
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BLAST of Spo07116.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
H6T8Q8_9CARY6.1e-5583.6NADH dehydrogenase subunit K (... [more]
H6T8R0_MOLVE8.0e-5583.1NADH dehydrogenase subunit K (... [more]
H6T8R4_POROL5.2e-5482.3NADH dehydrogenase subunit K (... [more]
H6T8R3_9CARY8.9e-5481.6NADH dehydrogenase subunit K (... [more]
V5JE35_LIQFO1.5e-5381.1NAD(P)H-quinone oxidoreductase... [more]
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BLAST of Spo07116.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
NDHK_SPIOL1.2e-4888.5NAD(P)H-quinone oxidoreductase... [more]
NDHK_NANDO5.2e-4784.9NAD(P)H-quinone oxidoreductase... [more]
NDHK_VITVI2.0e-4684.0NAD(P)H-quinone oxidoreductase... [more]
NDHK_DRIGR2.0e-4684.0NAD(P)H-quinone oxidoreductase... [more]
NDHK_LIRTU2.0e-4684.0NAD(P)H-quinone oxidoreductase... [more]
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BLAST of Spo07116.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2
Match NameE-valueIdentityDescription
ATCG00430.17.9e-4680.5photosystem II reaction center... [more]
AT5G11770.11.8e-2144.3NADH-ubiquinone oxidoreductase... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006137NADH:ubiquinone oxidoreductase-like, 20kDa subunitGENE3D3.40.50.700coord: 75..124
score: 1.3
IPR006137NADH:ubiquinone oxidoreductase-like, 20kDa subunitPFAMPF01058Oxidored_q6coord: 79..124
score: 2.5
NoneNo IPR availablePANTHERPTHR11995NADH DEHYDROGENASEcoord: 6..124
score: 2.9
NoneNo IPR availablePANTHERPTHR11995:SF21NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT K, CHLOROPLASTICcoord: 6..124
score: 2.9
NoneNo IPR availableunknownSSF56770HydA/Nqo6-likecoord: 40..125
score: 9.42

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006120 mitochondrial electron transport, NADH to ubiquinone
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0018298 protein-chromophore linkage
biological_process GO:0019684 photosynthesis, light reaction
biological_process GO:0009772 photosynthetic electron transport in photosystem II
biological_process GO:0006814 sodium ion transport
biological_process GO:0006744 ubiquinone biosynthetic process
biological_process GO:1902600 proton transmembrane transport
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0009522 photosystem I
cellular_component GO:0009523 photosystem II
cellular_component GO:0030076 light-harvesting complex
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0051536 iron-sulfur cluster binding
molecular_function GO:0051539 4 iron, 4 sulfur cluster binding
molecular_function GO:0048038 quinone binding
molecular_function GO:0008137 NADH dehydrogenase (ubiquinone) activity
molecular_function GO:0016168 chlorophyll binding
molecular_function GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0005506 iron ion binding
molecular_function GO:0009055 electron transfer activity
molecular_function GO:0000287 magnesium ion binding
molecular_function GO:0016491 oxidoreductase activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo164860.88Barchart | Table
Spo164900.68Barchart | Table
Spo062000.65Barchart | Table
Spo062010.65Barchart | Table
Spo084400.65Barchart | Table