Spo07074 (gene)

Overview
NameSpo07074
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionPentatricopeptide (PPR) repeat-containing protein-like
Locationchr4 : 116570579 .. 116572388 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ACGTCCCCATTTTCCAACACTAACAATTCCGTATAAAAAAATTAACCATATGGTCCACATCCTTAGGAGTACCATGATTGGACCATAATTACGTCTTGCACTCCCCCAACTTTCAAACTTACTCTCTCCTCCCCTCGTATAAATAGCTCTCCTTCCCTCCCCCATTCTTCTTCATTCCTTCAATTTTCTCAATTCCAATTAATTAAAATCAAATAATACAAATTCTGAGTTGGTTAACTTATGAGAGCTTCTGCAACACACTACTCATTTAAGAGCCGAAGCTCTTCTCTCTCTTCCGCTCTAAGCTTTCCTTGCCACCGTTTATTTCGCTACCTCCGCCTACGCTAACCCAAAACCACCTCCCGTACGCCGCCAAATATGCCGTCCCCTAAGTCGAATCGAAACGGACTCTCATCATTCTCTAGAGTAACCGAAAGATCGATGTCCTTCAACGGAAGAACGGTTGTTTCACCGACAGCGGAAAAACTCCGTCGACCGAAAACGGTGCCGGATTTATCGTCGGCGATGAGAAACGCTGCCGTCAATTCTCCGCCTAAAGAGGAGGTTAAGCCGAAGAAGCTCACAAAAGTTCTACTGAATGTGATGATTCAAGGTAGTGTTGGCGCTGTTCAGGTTCTTATTAGTCCGGAATTAACGGTTAGAGAATTAGTTTCTGCTGCGATTAAGCAGTATGTGAAAGAAGGTCGCCGTCCTGTGCTTTCCTCCGCCATTGTTGATGATTTCGACCTCCATTATTCGCAGTTTAGCCTTGAAAGTAATTATCTCTCTCCTATTTTATTGTCTGTTTAAGATTCGTTAGTGTTTACGGATTTGTCGTTCTAACTATTGATGCGATTTTTACTGCCGTATCTTTGGAATTATTAAACTGATTTTGTTATCACGATATGATCATATACACGTCTGTCCGGATTAAGTTGTAACGAATTGAGAAATATTAATCATCATTAATTAAAAAGTATCTATTGTTTTTTATTAATATTACAGCAGTTGAAATGATTGTATAGCTAGTCAATTCAAATTTAGTTGTCGGCGTTATTGGTTCAAATTAAACCAGTTCAAATGATTGGTTGATGGTAATTTTGATGGATTAATATAGTAGTTGATTGATGAATGTTGGATTAATTGCAGGTTTGGATAGAGGAGAGAAAATAGCAGAGTTAGGGTCAAGGAACTTTTTCCTATGCAAAAAGAGGAAGGAGGTGGTTGAAACGGCGTCGTCATGTGCAAAGCAGGCTGAACAGGCTACAAAAGTTGATTCTCCTTGGCTCAAGTTCATGAGTTTCTTATTCTAAATTAAACCCTGCCCAAAAAACATTTTAAAAAGTGAGATATTTGGTAATGAAAAATAATAATTTCTGGCCATATTCTTGTTTAAGGTGGTCCATTCTTGTGTTTAAGGAATTTGGACTAGTAAATTATGTTTAGATTTTATTTAGAATTTTTTAGTTTAAAAATTTGTGGTAGCAGAAGTAGTATTGTACAGTTGGAAAGATTCCTATAGCAAAAAATGATAATTAAAAAAATAGTTAGATACAAAATCAGTGTTATCTTACAAAGTTACAATTGTATGGATTTTATTCTCATTTTGAATATACTCTGAATCCGGATATTTGCTTGTTAGACAATTTGTCAATTTGTTTGTTGGCATTCTTGACAAGTTGCTTGTTTAAATACTACTCGTAGTACTTGTAAGTTGTAATTGATGTGATTCCAATAATGCAGTGGAAAGGATAATCTCGGGTATCCATTAGTAAACTGTGCGCCTGTGCGGCGGATAACAAGGATTTAA

mRNA sequence

ACGTCCCCATTTTCCAACACTAACAATTCCGTATAAAAAAATTAACCATATGGTCCACATCCTTAGGAGTACCATGATTGGACCATAATTACGTCTTGCACTCCCCCAACTTTCAAACTTACTCTCTCCTCCCCTCGTATAAATAGCTCTCCTTCCCTCCCCCATTCTTCTTCATTCCTTCAATTTTCTCAATTCCAATTAATTAAAATCAAATAATACAAATTCTGAGTTGGTTAACTTATGAGAGCTTCTGCAACACACTACTCATTTAAGAGCCGAAGCTCTTCTCTCTCTTCCGCTCTAAGCTTTCCTTGCCACCGTTTATTTCGCTACCTCCGCCTACGCTAACCCAAAACCACCTCCCGTACGCCGCCAAATATGCCGTCCCCTAAGTCGAATCGAAACGGACTCTCATCATTCTCTAGAGTAACCGAAAGATCGATGTCCTTCAACGGAAGAACGGTTGTTTCACCGACAGCGGAAAAACTCCGTCGACCGAAAACGGTGCCGGATTTATCGTCGGCGATGAGAAACGCTGCCGTCAATTCTCCGCCTAAAGAGGAGGTTAAGCCGAAGAAGCTCACAAAAGTTCTACTGAATGTGATGATTCAAGGTAGTGTTGGCGCTGTTCAGGTTCTTATTAGTCCGGAATTAACGGTTAGAGAATTAGTTTCTGCTGCGATTAAGCAGTATGTGAAAGAAGGTCGCCGTCCTGTGCTTTCCTCCGCCATTGTTGATGATTTCGACCTCCATTATTCGCAGTTTAGCCTTGAAAGTTTGGATAGAGGAGAGAAAATAGCAGAGTTAGGGTCAAGGAACTTTTTCCTATGCAAAAAGAGGAAGGAGGTGGTTGAAACGGCGTCGTCATGTGCAAAGCAGGCTGAACAGGCTACAAAAGTTGATTCTCCTTGGCTCAAGTTCATGAGTTTCTTATTCTAAATTAAACCCTGCCCAAAAAACATTTTAAAAAGTGAGATATTTGGTAATGAAAAATAATAATTTCTGGCCATATTCTTGTTTAAGGTGGTCCATTCTTGTGTTTAAGGAATTTGGACTAGTAAATTATGTTTAGATTTTATTTAGAATTTTTTAGTTTAAAAATTTGTGGTAGCAGAAGTAGTATTGTACAGTTGGAAAGATTCCTATAGCAAAAAATGATAATTAAAAAAATAGTTAGATACAAAATCAGTGTTATCTTACAAAGTTACAATTGTATGGATTTTATTCTCATTTTGAATATACTCTGAATCCGGATATTTGCTTGTTAGACAATTTGTCAATTTGTTTGTTGGCATTCTTGACAAGTTGCTTGTTTAAATACTACTCGTAGTACTTGTAAGTTGTAATTGATGTGATTCCAATAATGCAGTGGAAAGGATAATCTCGGGTATCCATTAGTAAACTGTGCGCCTGTGCGGCGGATAACAAGGATTTAA

Coding sequence (CDS)

ATGCCGTCCCCTAAGTCGAATCGAAACGGACTCTCATCATTCTCTAGAGTAACCGAAAGATCGATGTCCTTCAACGGAAGAACGGTTGTTTCACCGACAGCGGAAAAACTCCGTCGACCGAAAACGGTGCCGGATTTATCGTCGGCGATGAGAAACGCTGCCGTCAATTCTCCGCCTAAAGAGGAGGTTAAGCCGAAGAAGCTCACAAAAGTTCTACTGAATGTGATGATTCAAGGTAGTGTTGGCGCTGTTCAGGTTCTTATTAGTCCGGAATTAACGGTTAGAGAATTAGTTTCTGCTGCGATTAAGCAGTATGTGAAAGAAGGTCGCCGTCCTGTGCTTTCCTCCGCCATTGTTGATGATTTCGACCTCCATTATTCGCAGTTTAGCCTTGAAAGTTTGGATAGAGGAGAGAAAATAGCAGAGTTAGGGTCAAGGAACTTTTTCCTATGCAAAAAGAGGAAGGAGGTGGTTGAAACGGCGTCGTCATGTGCAAAGCAGGCTGAACAGGCTACAAAAGTTGATTCTCCTTGGCTCAAGTTCATGAGTTTCTTATTCTAA

Protein sequence

MPSPKSNRNGLSSFSRVTERSMSFNGRTVVSPTAEKLRRPKTVPDLSSAMRNAAVNSPPKEEVKPKKLTKVLLNVMIQGSVGAVQVLISPELTVRELVSAAIKQYVKEGRRPVLSSAIVDDFDLHYSQFSLESLDRGEKIAELGSRNFFLCKKRKEVVETASSCAKQAEQATKVDSPWLKFMSFLF
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo07074.1Spo07074.1mRNA


Homology
[Close]
BLAST of Spo07074.1 vs. NCBI nr
Match: gi|902235801|gb|KNA24095.1| (hypothetical protein SOVF_018990 [Spinacia oleracea])

HSP 1 Score: 352.1 bits (902), Expect = 6.100e-94
Identity = 186/186 (100.00%), Postives = 186/186 (100.00%), Query Frame = 1 

		  

Query: 1   MPSPKSNRNGLSSFSRVTERSMSFNGRTVVSPTAEKLRRPKTVPDLSSAMRNAAVNSPPK 60
           MPSPKSNRNGLSSFSRVTERSMSFNGRTVVSPTAEKLRRPKTVPDLSSAMRNAAVNSPPK
Sbjct: 1   MPSPKSNRNGLSSFSRVTERSMSFNGRTVVSPTAEKLRRPKTVPDLSSAMRNAAVNSPPK 60

Query: 61  EEVKPKKLTKVLLNVMIQGSVGAVQVLISPELTVRELVSAAIKQYVKEGRRPVLSSAIVD 120
           EEVKPKKLTKVLLNVMIQGSVGAVQVLISPELTVRELVSAAIKQYVKEGRRPVLSSAIVD
Sbjct: 61  EEVKPKKLTKVLLNVMIQGSVGAVQVLISPELTVRELVSAAIKQYVKEGRRPVLSSAIVD 120

Query: 121 DFDLHYSQFSLESLDRGEKIAELGSRNFFLCKKRKEVVETASSCAKQAEQATKVDSPWLK 180
           DFDLHYSQFSLESLDRGEKIAELGSRNFFLCKKRKEVVETASSCAKQAEQATKVDSPWLK
Sbjct: 121 DFDLHYSQFSLESLDRGEKIAELGSRNFFLCKKRKEVVETASSCAKQAEQATKVDSPWLK 180

Query: 181 FMSFLF 187
           FMSFLF
Sbjct: 181 FMSFLF 186
[Close]
BLAST of Spo07074.1 vs. NCBI nr
Match: gi|731357085|ref|XP_010690021.1| (PREDICTED: uncharacterized protein At4g22758-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 247.7 bits (631), Expect = 1.600e-62
Identity = 136/195 (69.74%), Postives = 158/195 (81.03%), Query Frame = 1 

		  

Query: 1   MPSPKSNRNGLSSFSRVTERSMSFNGRTVVSPTAEKLRRPKTVPDLSSAMRNAAVNSPPK 60
           MPSPK  RNG+  F +V+ERSMSF G++  SP  EKLRRPKTVPDL SA RN  V SP  
Sbjct: 1   MPSPKPIRNGI--FPKVSERSMSFTGKSGASPATEKLRRPKTVPDLRSAARNGVV-SPTS 60

Query: 61  EEVKPKKLTKVLLNVMIQGSVGAVQVLISPELTVRELVSAAIKQYVKEGRRPVLSSAIVD 120
           EE+KPKKLTKVLLNV IQGSVG V V+I+PELTV++L+SA +KQYVKEGRRP++S +  D
Sbjct: 61  EEMKPKKLTKVLLNVTIQGSVGIVHVIINPELTVKDLISATVKQYVKEGRRPMISCSNFD 120

Query: 121 DFDLHYSQFSLESLDRGEKIAELGSRNFFLCKKRKEVVETA------SSCAKQAEQATKV 180
           DFDLHYSQFSLESL+R EKIAELGSRNFFLCKK++EV ETA      SSC+KQAE+A ++
Sbjct: 121 DFDLHYSQFSLESLEREEKIAELGSRNFFLCKKKQEVAETAASSSSMSSCSKQAEKAAQL 180

Query: 181 DS---PWLKFMSFLF 187
            S   PWLKFMSFLF
Sbjct: 181 GSPCPPWLKFMSFLF 192
[Close]
BLAST of Spo07074.1 vs. NCBI nr
Match: gi|460365130|ref|XP_004228457.1| (PREDICTED: uncharacterized protein At4g22758-like [Solanum lycopersicum])

HSP 1 Score: 187.2 bits (474), Expect = 2.600e-44
Identity = 105/189 (55.56%), Postives = 133/189 (70.37%), Query Frame = 1 

		  

Query: 1   MPSPKSNRNGLSSFSR----VTERSMSFNGRTVVSPTAEKLRRPKTVPDLSSAMRNAAVN 60
           MPSP+++R G    +R    ++E+S SF+G++  S   E LRRPKTVPDL +  RN+A  
Sbjct: 2   MPSPRTHRRGNDEKNRKDMRLSEKSKSFHGQSSGSSKTELLRRPKTVPDLLAGGRNSAGE 61

Query: 61  SPPKEEVKPKKLTKVLLNVMIQGSVGAVQVLISPELTVRELVSAAIKQYVKEGRRPVLSS 120
           S     ++P KLTK+LLNV IQ SVG VQVLIS E TV +L++AA++QY KEGRRPVLSS
Sbjct: 62  SS-SANIRPMKLTKLLLNVTIQRSVGPVQVLISLESTVADLIAAALRQYTKEGRRPVLSS 121

Query: 121 AIVDDFDLHYSQFSLESLDRGEKIAELGSRNFFLCKKRKEVVETASSCAKQAEQATKVDS 180
               D+DLHYSQFSLESL+R E +  LGSRNFF+C K      ++ SC KQA+  TK+  
Sbjct: 122 INAGDYDLHYSQFSLESLEREENLNALGSRNFFMCPKNVASTTSSLSCGKQADTTTKIPL 181

Query: 181 PWLKFMSFL 186
           PWLKFM FL
Sbjct: 182 PWLKFMDFL 189
[Close]
BLAST of Spo07074.1 vs. NCBI nr
Match: gi|697158598|ref|XP_009588059.1| (PREDICTED: uncharacterized protein At4g22758-like [Nicotiana tomentosiformis])

HSP 1 Score: 185.7 bits (470), Expect = 7.600e-44
Identity = 105/191 (54.97%), Postives = 137/191 (71.73%), Query Frame = 1 

		  

Query: 1   MPSPKSNRNGLSSFSR---VTERSMSFNGRTV--VSPTAEKLRRPKTVPDLSSAMRNAAV 60
           M SP+ NR G    +R   ++E+SMSF+G++    S ++E LRRP+TVPDL + +R +A 
Sbjct: 1   MSSPRINRRGNEEKNRKGKLSEKSMSFHGQSSGSSSTSSELLRRPRTVPDLLAGVRTSAG 60

Query: 61  NSPPKEEVKPKKLTKVLLNVMIQGSVGAVQVLISPELTVRELVSAAIKQYVKEGRRPVLS 120
           +SP     +P KLTK+L+NV IQ SVG VQVLIS E TV +L++AA++QY KEGRRPV+S
Sbjct: 61  DSPSAVNFRPMKLTKMLVNVTIQRSVGPVQVLISLETTVEDLIAAALRQYSKEGRRPVIS 120

Query: 121 SAIVDDFDLHYSQFSLESLDRGEKIAELGSRNFFLCKKRKEVVETASSCAKQAEQATK-V 180
           S    D+DLHYSQFSLESLDR EK+A LGSRNFF+C K      ++ SC KQA+ + K +
Sbjct: 121 SVDAADYDLHYSQFSLESLDRKEKLAALGSRNFFMCPKNVGATTSSLSCGKQADTSNKNI 180

Query: 181 DSPWLKFMSFL 186
             PWLKFM FL
Sbjct: 181 PLPWLKFMDFL 191
[Close]
BLAST of Spo07074.1 vs. NCBI nr
Match: gi|82623367|gb|ABB87098.1| (hypothetical protein [Solanum tuberosum])

HSP 1 Score: 185.3 bits (469), Expect = 9.900e-44
Identity = 105/189 (55.56%), Postives = 133/189 (70.37%), Query Frame = 1 

		  

Query: 1   MPSPKSNRNGLSSFSR----VTERSMSFNGRTVVSPTAEKLRRPKTVPDLSSAMRNAAVN 60
           MPSP+++R G    +R    ++E+S SF+G+   S   E LRRPKTVPDL +  RN+A  
Sbjct: 2   MPSPRTHRRGNDEKNRKDMRLSEKSKSFHGQISGSSKTEVLRRPKTVPDLLAGGRNSAGE 61

Query: 61  SPPKEEVKPKKLTKVLLNVMIQGSVGAVQVLISPELTVRELVSAAIKQYVKEGRRPVLSS 120
           S   + ++P KLTK+LLNV IQ SVG VQVLIS E TV +L++AA++QY KEGRRPVLSS
Sbjct: 62  STAVK-IRPMKLTKLLLNVTIQRSVGPVQVLISLESTVADLIAAALRQYSKEGRRPVLSS 121

Query: 121 AIVDDFDLHYSQFSLESLDRGEKIAELGSRNFFLCKKRKEVVETASSCAKQAEQATKVDS 180
               D+DLHYSQFSLESL+R E +  LGSRNFF+C K      ++ SC KQA+  TK+  
Sbjct: 122 VDAADYDLHYSQFSLESLEREENLNALGSRNFFMCPKNVASTTSSLSCGKQADTTTKIPL 181

Query: 181 PWLKFMSFL 186
           PWLKFM FL
Sbjct: 182 PWLKFMDFL 189
[Close]
BLAST of Spo07074.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RX34_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_018990 PE=4 SV=1)

HSP 1 Score: 352.1 bits (902), Expect = 4.300e-94
Identity = 186/186 (100.00%), Postives = 186/186 (100.00%), Query Frame = 1 

		  

Query: 1   MPSPKSNRNGLSSFSRVTERSMSFNGRTVVSPTAEKLRRPKTVPDLSSAMRNAAVNSPPK 60
           MPSPKSNRNGLSSFSRVTERSMSFNGRTVVSPTAEKLRRPKTVPDLSSAMRNAAVNSPPK
Sbjct: 1   MPSPKSNRNGLSSFSRVTERSMSFNGRTVVSPTAEKLRRPKTVPDLSSAMRNAAVNSPPK 60

Query: 61  EEVKPKKLTKVLLNVMIQGSVGAVQVLISPELTVRELVSAAIKQYVKEGRRPVLSSAIVD 120
           EEVKPKKLTKVLLNVMIQGSVGAVQVLISPELTVRELVSAAIKQYVKEGRRPVLSSAIVD
Sbjct: 61  EEVKPKKLTKVLLNVMIQGSVGAVQVLISPELTVRELVSAAIKQYVKEGRRPVLSSAIVD 120

Query: 121 DFDLHYSQFSLESLDRGEKIAELGSRNFFLCKKRKEVVETASSCAKQAEQATKVDSPWLK 180
           DFDLHYSQFSLESLDRGEKIAELGSRNFFLCKKRKEVVETASSCAKQAEQATKVDSPWLK
Sbjct: 121 DFDLHYSQFSLESLDRGEKIAELGSRNFFLCKKRKEVVETASSCAKQAEQATKVDSPWLK 180

Query: 181 FMSFLF 187
           FMSFLF
Sbjct: 181 FMSFLF 186
[Close]
BLAST of Spo07074.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BJQ9_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g211110 PE=4 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 1.100e-62
Identity = 136/195 (69.74%), Postives = 158/195 (81.03%), Query Frame = 1 

		  

Query: 1   MPSPKSNRNGLSSFSRVTERSMSFNGRTVVSPTAEKLRRPKTVPDLSSAMRNAAVNSPPK 60
           MPSPK  RNG+  F +V+ERSMSF G++  SP  EKLRRPKTVPDL SA RN  V SP  
Sbjct: 1   MPSPKPIRNGI--FPKVSERSMSFTGKSGASPATEKLRRPKTVPDLRSAARNGVV-SPTS 60

Query: 61  EEVKPKKLTKVLLNVMIQGSVGAVQVLISPELTVRELVSAAIKQYVKEGRRPVLSSAIVD 120
           EE+KPKKLTKVLLNV IQGSVG V V+I+PELTV++L+SA +KQYVKEGRRP++S +  D
Sbjct: 61  EEMKPKKLTKVLLNVTIQGSVGIVHVIINPELTVKDLISATVKQYVKEGRRPMISCSNFD 120

Query: 121 DFDLHYSQFSLESLDRGEKIAELGSRNFFLCKKRKEVVETA------SSCAKQAEQATKV 180
           DFDLHYSQFSLESL+R EKIAELGSRNFFLCKK++EV ETA      SSC+KQAE+A ++
Sbjct: 121 DFDLHYSQFSLESLEREEKIAELGSRNFFLCKKKQEVAETAASSSSMSSCSKQAEKAAQL 180

Query: 181 DS---PWLKFMSFLF 187
            S   PWLKFMSFLF
Sbjct: 181 GSPCPPWLKFMSFLF 192
[Close]
BLAST of Spo07074.1 vs. UniProtKB/TrEMBL
Match: K4ATD9_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 1.800e-44
Identity = 105/189 (55.56%), Postives = 133/189 (70.37%), Query Frame = 1 

		  

Query: 1   MPSPKSNRNGLSSFSR----VTERSMSFNGRTVVSPTAEKLRRPKTVPDLSSAMRNAAVN 60
           MPSP+++R G    +R    ++E+S SF+G++  S   E LRRPKTVPDL +  RN+A  
Sbjct: 2   MPSPRTHRRGNDEKNRKDMRLSEKSKSFHGQSSGSSKTELLRRPKTVPDLLAGGRNSAGE 61

Query: 61  SPPKEEVKPKKLTKVLLNVMIQGSVGAVQVLISPELTVRELVSAAIKQYVKEGRRPVLSS 120
           S     ++P KLTK+LLNV IQ SVG VQVLIS E TV +L++AA++QY KEGRRPVLSS
Sbjct: 62  SS-SANIRPMKLTKLLLNVTIQRSVGPVQVLISLESTVADLIAAALRQYTKEGRRPVLSS 121

Query: 121 AIVDDFDLHYSQFSLESLDRGEKIAELGSRNFFLCKKRKEVVETASSCAKQAEQATKVDS 180
               D+DLHYSQFSLESL+R E +  LGSRNFF+C K      ++ SC KQA+  TK+  
Sbjct: 122 INAGDYDLHYSQFSLESLEREENLNALGSRNFFMCPKNVASTTSSLSCGKQADTTTKIPL 181

Query: 181 PWLKFMSFL 186
           PWLKFM FL
Sbjct: 182 PWLKFMDFL 189
[Close]
BLAST of Spo07074.1 vs. UniProtKB/TrEMBL
Match: Q2VCL4_SOLTU (Putative uncharacterized protein OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 6.900e-44
Identity = 105/189 (55.56%), Postives = 133/189 (70.37%), Query Frame = 1 

		  

Query: 1   MPSPKSNRNGLSSFSR----VTERSMSFNGRTVVSPTAEKLRRPKTVPDLSSAMRNAAVN 60
           MPSP+++R G    +R    ++E+S SF+G+   S   E LRRPKTVPDL +  RN+A  
Sbjct: 2   MPSPRTHRRGNDEKNRKDMRLSEKSKSFHGQISGSSKTEVLRRPKTVPDLLAGGRNSAGE 61

Query: 61  SPPKEEVKPKKLTKVLLNVMIQGSVGAVQVLISPELTVRELVSAAIKQYVKEGRRPVLSS 120
           S   + ++P KLTK+LLNV IQ SVG VQVLIS E TV +L++AA++QY KEGRRPVLSS
Sbjct: 62  STAVK-IRPMKLTKLLLNVTIQRSVGPVQVLISLESTVADLIAAALRQYSKEGRRPVLSS 121

Query: 121 AIVDDFDLHYSQFSLESLDRGEKIAELGSRNFFLCKKRKEVVETASSCAKQAEQATKVDS 180
               D+DLHYSQFSLESL+R E +  LGSRNFF+C K      ++ SC KQA+  TK+  
Sbjct: 122 VDAADYDLHYSQFSLESLEREENLNALGSRNFFMCPKNVASTTSSLSCGKQADTTTKIPL 181

Query: 181 PWLKFMSFL 186
           PWLKFM FL
Sbjct: 182 PWLKFMDFL 189
[Close]
BLAST of Spo07074.1 vs. UniProtKB/TrEMBL
Match: M1CPS1_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400028068 PE=4 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 6.900e-44
Identity = 105/189 (55.56%), Postives = 133/189 (70.37%), Query Frame = 1 

		  

Query: 1   MPSPKSNRNGLSSFSR----VTERSMSFNGRTVVSPTAEKLRRPKTVPDLSSAMRNAAVN 60
           MPSP+++R G    +R    ++E+S SF+G++  S   E LRRPKTVPDL +  RN+A  
Sbjct: 2   MPSPRTHRRGNDEKNRKDMRLSEKSKSFHGQSSGSSKTELLRRPKTVPDLLAGGRNSAGE 61

Query: 61  SPPKEEVKPKKLTKVLLNVMIQGSVGAVQVLISPELTVRELVSAAIKQYVKEGRRPVLSS 120
           S     ++P KLTK+LLNV IQ SVG VQVLIS E TV +L++AA++QY KEGRRPVLSS
Sbjct: 62  STAVN-IRPMKLTKLLLNVTIQRSVGPVQVLISLESTVADLIAAALQQYSKEGRRPVLSS 121

Query: 121 AIVDDFDLHYSQFSLESLDRGEKIAELGSRNFFLCKKRKEVVETASSCAKQAEQATKVDS 180
               D+DLHYSQFSLESL+R E +  LGSRNFF+C K      ++ SC KQA+  TK+  
Sbjct: 122 VDAADYDLHYSQFSLESLEREENLNALGSRNFFMCPKNVASTTSSLSCGKQADTTTKIPL 181

Query: 181 PWLKFMSFL 186
           PWLKFM FL
Sbjct: 182 PWLKFMDFL 189
[Close]
BLAST of Spo07074.1 vs. ExPASy Swiss-Prot
Match: Y4276_ARATH (Uncharacterized protein At4g22758 OS=Arabidopsis thaliana GN=At4g22758 PE=2 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.000e-11
Identity = 41/110 (37.27%), Postives = 64/110 (58.18%), Query Frame = 1 

		  

Query: 56  NSPPKEEVKPKKLTKVLLNVMIQGSVGAVQVLISPELTVRELVSAAIKQYVKEGRRPVLS 115
           +SP  +E   K+  KV+++V ++GS G V+ ++     V E +   + +Y KEGR P L 
Sbjct: 109 SSPINQEGNTKEAPKVIISVAVEGSPGPVRAMVKLSCNVEETIKIVVDKYCKEGRTPKLD 168

Query: 116 SAIVDDFDLHYSQFSLESLDRGEKIAELGSRNFFLCKKRKEVVETASSCA 166
                 F+LH S FS++ L++ E I ELGSR+F++   RK+  ET  S A
Sbjct: 169 RDSA--FELHQSHFSIQCLEKREIIGELGSRSFYM---RKKAPETGGSFA 213
[Close]
BLAST of Spo07074.1 vs. TAIR (Arabidopsis)
Match: AT2G27830.1 (unknown protein)

HSP 1 Score: 155.2 bits (391), Expect = 3.900e-38
Identity = 87/175 (49.71%), Postives = 120/175 (68.57%), Query Frame = 1 

		  

Query: 16  RVTERSMSFNGR-TVVSPTAEKLRRPKTVPDLSSAMRNAAVNSPPKEEVKPKKLTKVLLN 75
           +++E++MSF+GR T       +LRRPKT+P+L S  ++  V   P+    P +LTK+LLN
Sbjct: 19  KLSEKAMSFHGRGTTPLSNPGELRRPKTLPELFSTGQSITV---PETVSLPPRLTKLLLN 78

Query: 76  VMIQGSVGAVQVLISPELTVRELVSAAIKQYVKEGRRPVLSSAIVDDFDLHYSQFSLESL 135
           V +QGS+GAVQ++ISPE TV +L+ AA++QYVKE RRP L  +    FDLHYSQFSLES+
Sbjct: 79  VTVQGSLGAVQIIISPESTVSDLIDAAVRQYVKEARRPFLPESEPSRFDLHYSQFSLESI 138

Query: 136 DRGEKIAELGSRNFFLCKKRKE-----VVETASSCAKQAEQATKVDSPWLKFMSF 185
            R EK+  LGSRNFFLC +++         ++ SC+K+AE+  K    WLKFM F
Sbjct: 139 VRDEKLISLGSRNFFLCGRKETGGFIGCGLSSESCSKEAEKVAKTGFHWLKFMGF 190
[Close]
BLAST of Spo07074.1 vs. TAIR (Arabidopsis)
Match: AT4G22758.1 (unknown protein)

HSP 1 Score: 71.6 bits (174), Expect = 5.600e-13
Identity = 41/110 (37.27%), Postives = 64/110 (58.18%), Query Frame = 1 

		  

Query: 56  NSPPKEEVKPKKLTKVLLNVMIQGSVGAVQVLISPELTVRELVSAAIKQYVKEGRRPVLS 115
           +SP  +E   K+  KV+++V ++GS G V+ ++     V E +   + +Y KEGR P L 
Sbjct: 109 SSPINQEGNTKEAPKVIISVAVEGSPGPVRAMVKLSCNVEETIKIVVDKYCKEGRTPKLD 168

Query: 116 SAIVDDFDLHYSQFSLESLDRGEKIAELGSRNFFLCKKRKEVVETASSCA 166
                 F+LH S FS++ L++ E I ELGSR+F++   RK+  ET  S A
Sbjct: 169 RDSA--FELHQSHFSIQCLEKREIIGELGSRSFYM---RKKAPETGGSFA 213
[Close]
BLAST of Spo07074.1 vs. TAIR (Arabidopsis)
Match: AT1G70780.1 (unknown protein)

HSP 1 Score: 56.6 bits (135), Expect = 1.900e-8
Identity = 31/90 (34.44%), Postives = 52/90 (57.78%), Query Frame = 1 

		  

Query: 67  KLTKVLLNVMIQGSVGAVQVLISPELTVRELVSAAIKQYVKEGRRPVLSSAIVDDFDLHY 126
           K  ++L++V + GS G ++ +   +  V  ++  A+K Y +EGR P+L S   +DF L+ 
Sbjct: 14  KGNRILISVTVLGSAGPIRFVAYEDDLVASVIDTALKGYAREGRLPLLGSDF-NDFLLYC 73

Query: 127 SQFSLESLDRGEKIAELGSRNFFLCKKRKE 157
                E+L   + I  LG+RNF LC+K +E
Sbjct: 74  PMVGPEALSTWDAIGSLGARNFMLCRKPEE 102
The following BLAST results are available for this feature:
BLAST of Spo07074.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902235801|gb|KNA24095.1|6.1e-94100.hypothetical protein SOVF_0189... [more]
gi|731357085|ref|XP_010690021.1|1.6e-6269.7PREDICTED: uncharacterized pro... [more]
gi|460365130|ref|XP_004228457.1|2.6e-4455.5PREDICTED: uncharacterized pro... [more]
gi|697158598|ref|XP_009588059.1|7.6e-4454.9PREDICTED: uncharacterized pro... [more]
gi|82623367|gb|ABB87098.1|9.9e-4455.5hypothetical protein [Solanum ... [more]
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BLAST of Spo07074.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RX34_SPIOL4.3e-94100.Uncharacterized protein OS=Spi... [more]
A0A0J8BJQ9_BETVU1.1e-6269.7Uncharacterized protein OS=Bet... [more]
K4ATD9_SOLLC1.8e-4455.5Uncharacterized protein OS=Sol... [more]
Q2VCL4_SOLTU6.9e-4455.5Putative uncharacterized prote... [more]
M1CPS1_SOLTU6.9e-4455.5Uncharacterized protein OS=Sol... [more]
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BLAST of Spo07074.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y4276_ARATH1.0e-1137.2Uncharacterized protein At4g22... [more]
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BLAST of Spo07074.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 3
Match NameE-valueIdentityDescription
AT2G27830.13.9e-3849.7unknown protein[more]
AT4G22758.15.6e-1337.2unknown protein[more]
AT1G70780.11.9e-834.4unknown protein[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33270FAMILY NOT NAMEDcoord: 1..185
score: 4.7
NoneNo IPR availablePANTHERPTHR33270:SF3EXPRESSED PROTEINcoord: 1..185
score: 4.7

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000902 cell morphogenesis
biological_process GO:0090503 RNA phosphodiester bond hydrolysis, exonucleolytic
biological_process GO:0048193 Golgi vesicle transport
biological_process GO:0007030 Golgi organization
biological_process GO:0030968 endoplasmic reticulum unfolded protein response
biological_process GO:0016049 cell growth
biological_process GO:0007033 vacuole organization
biological_process GO:0010228 vegetative to reproductive phase transition of meristem
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0006468 protein phosphorylation
biological_process GO:0016567 protein ubiquitination
biological_process GO:0009972 cytidine deamination
biological_process GO:0008152 metabolic process
biological_process GO:0006206 pyrimidine nucleobase metabolic process
biological_process GO:0009863 salicylic acid mediated signaling pathway
biological_process GO:0009646 response to absence of light
biological_process GO:0006612 protein targeting to membrane
biological_process GO:0034051 negative regulation of plant-type hypersensitive response
biological_process GO:0009867 jasmonic acid mediated signaling pathway
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
cellular_component GO:0005737 cytoplasm
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005886 plasma membrane
molecular_function GO:0004674 protein serine/threonine kinase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0046872 metal ion binding
molecular_function GO:0004535 poly(A)-specific ribonuclease activity
molecular_function GO:0003723 RNA binding
molecular_function GO:0016740 transferase activity
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0016779 nucleotidyltransferase activity
molecular_function GO:0030246 carbohydrate binding
molecular_function GO:0016597 amino acid binding
molecular_function GO:0004126 cytidine deaminase activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo121450.78Barchart | Table
Spo049680.78Barchart | Table
Spo254830.75Barchart | Table
Spo248080.75Barchart | Table
Spo016860.71Barchart | Table
Spo189100.71Barchart | Table
Spo048380.71Barchart | Table
Spo072520.71Barchart | Table
Spo095770.71Barchart | Table
Spo195990.71Barchart | Table
Spo184750.70Barchart | Table
Spo173230.70Barchart | Table
Spo072360.69Barchart | Table
Spo007250.69Barchart | Table
Spo049010.69Barchart | Table
Spo095070.69Barchart | Table
Spo108640.69Barchart | Table
Spo118250.69Barchart | Table
Spo133930.69Barchart | Table
Spo139410.69Barchart | Table
Spo150650.69Barchart | Table
Spo136140.68Barchart | Table
Spo107370.68Barchart | Table
Spo012610.68Barchart | Table
Spo197510.68Barchart | Table
Spo075140.67Barchart | Table
Spo132020.67Barchart | Table
Spo173380.67Barchart | Table
Spo187780.67Barchart | Table
Spo052190.67Barchart | Table
Spo193140.67Barchart | Table
Spo193720.67Barchart | Table
Spo197880.67Barchart | Table
Spo238180.67Barchart | Table
Spo242550.67Barchart | Table
Spo054020.66Barchart | Table
Spo229200.66Barchart | Table
Spo251710.66Barchart | Table
Spo002830.66Barchart | Table
Spo156430.66Barchart | Table
Spo071810.66Barchart | Table
Spo247960.66Barchart | Table
Spo179400.66Barchart | Table
Spo089350.66Barchart | Table
Spo250780.66Barchart | Table
Spo093810.66Barchart | Table
Spo100530.65Barchart | Table
Spo082050.65Barchart | Table
Spo083250.65Barchart | Table
Spo271220.65Barchart | Table
Spo013410.65Barchart | Table
Spo232380.65Barchart | Table
Spo003620.65Barchart | Table