Spo06811 (gene)

Overview
NameSpo06811
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
Locationchr5 : 36493837 .. 36496819 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGAGCCGATGTCTAGGTTTGGTTTGGTTTCATTCTTTAATTGTTGAATTTCTGAAGTGAAGTTATGTTAATTACATGAAATATTCTAAATAGTAATTACTACCAAAATGTAATTTATAGCTTCTAAAGTGATTTCACATTGAATTTCAAATGTTGACGACCTTGACCTTTTAGCTGACGATTAGTCAAAAAAATTAATGTCGACTTCTGCAAACGTAATTGATTATACGCTCTTGAAAAAATACAGCAAGAACATAGGAATTCAATGTATCGAAATCGAAAACCATCCTTGCAAATATGACAAATTTGGAAATCAAATTGAAGAAAATTAAATCTCTCAAAAATAAAACGCTTGCATTTTTAAATTCAAAGAATTTACTATAGAAGAAAACAATACACAATAACAACTAAATCAAAACATGAAGAAAAATATGATTAGCAACCCGAAAATTTTCAATTTTCATCTCGCAGTTTGATTTTTTATTTAGATCTCATATATGCTTTGACATTCAATTCTTAGTCATTTGATCTTTGATTTCATTCTCTATTGGTGAAAGTGATGGGAAAATTAAGGTATTAGATTTTGAAATATTTTCTTTTTATTTTTTAATTTAATAAATCGAGATGATCTTGTACATCTTTGGGTTTTTTGGGTATGTTCTTCTTCCATTTCTCTCATTATGTTTTAACTGTTGCCTTGATTTGCATAATATATAAGTTTAAATATTAGGTTTTCTAAATTAAATTCTGATTTAGGCTTAGATCTTAGGGTTTTTCATAATTGGGTTTGAGTTTTTTATGAAAATATTTTTTTTCTTCATAATTTGATTTTTCTGCTTAAATTGACGACCTGGGTAGCCTGAGGCAGGTATTTCAACTTTCATTCTTTTCAAGTTTCTCTAAAGATTGAGCTTGAGCAAAACTCAAATTTGGTGGGTTTAGTTTATGTTATGACTGGGTATTTGAAGCTCATTATAGCACAAGTTCCATACGGAGAGCTAAATTTACTCTTTAATTTGGAGGTTTGAAAATGTAAGGTAGTCCTGATATTTATGTGTTTGTGTGTGTATATGTTATACAAAAGATGTGAATTTTTATTACATATTTACGAATTGCATTATACTACGTAATAATGCTAACTTGTTATTAACGCATGTGAATAAAGTAAAATAATTTACTCTCTTGTCCTACATGATCTTTTACAGTTGTACAAATCAAAGAAAAGAGAGTGCGAGAGGGAATCTATACTTAAATGAAAAGAAAAGACAATATATGACCTATAAAAGAGGGCAGCGTATCTATTGGATGTGTGGCAGTTGACACGAGCCAAAGATTAGAGGAAAACCAACTCAATAAGATGTTATTCTACTTCAGGCATGTAATCTTTCTAGTTATTCATCTTCACCGCGGTTGAAAATATTATTGTAGAATGATGAGGAAACAACATTAGCCCTTGGGTTACCATTTCATTACCACCTCCAATATCATTTCTATTGTTGCCACACGTATCGAAGTTATTGTTCGTGGTGATAGACTCTGCACTTTGCAGTAGAGGTGTATCTGCAAAGCCAAAGTAATGGCTTTGAGGATTTTTCCTGATCCTAAATTTAGTTACCTTGTTGTATATATGACTGTTGTGCTAGTTTAGATTAGATTGTTCTCTTGTTTGCTATCCTAATAATATATTGGCTCATTTCATTTGTTCTAGAAGTATATATATGTATCAAGATTTTCCCGTAATCAGTTTAAGTACATATACTATATCTTTCAATGTGTTCTAAATAATATTATATTTATGTTCTTAAGGTATAGATGCACCCCCAAAGAAAAACCTAAGCCAGTGGGAGCTCTATCAACTTCCCAAGCATGTTCCGGATTTTGATCTTAATCTTAAATTTCCCCCAACTTCAGACCTTTTTGTTAAACTGATGTTCTAACTCTGATTTATGAGGAGCTATCAGGGGTACATTGGTGGTACAAGATCGATAGTCATGCAGCTGAACTAACAGCAGGGTTCTGCAACCTATGTAACCGTGATGGTATGCTGCAATGATGTCCATGTTGAAGAAACATGGAGTTGCTTTGACCTTCACGCCTGCAGAAGTGGACTTGTTGGATCAGCTTGAGGATTCTTCTAAACCACTTGTCGTTCCCGAAAGACTGGCTTGGCAAGTAAGTACTGCATAACATTTTATTATTTGCATCATTTTTTCCTCTAATCGACAACGTTGAAACACTTGTTTTGAGTAAAAAGAAAGCATTTCCTAATATTTTTTGGTTGAGTAAAGATAGCATTTTACTTGAATCTTCTATAATGCATTGTAGATATAGTAGAAGGTTTGAGACTTTACTGGTCTAGTTTTGTTTCTCCTTTTTTTGCCTTATAGTGCAAATTTAACCTTTTGGTCTGTCTGATCTCCTCTTGAACCTTCAAAGCAAAACAAGAGATGGAGAGAATTTTAGTACATCACCATCAATCACTTTTTCTGATGGGTTGCATAATTTGGTTTATAGCTTAGGATCTTAAAATGTCTCAGAGTTGGCCTAATACCCTTTAGAACAGTGGCACTTTAGGATATTAGGGAAGGTACAGGGATCATGACCTTCAAATTGATTTTGCAAGCTCCCTTCTAGGTTTTGTGTTGTGAAAATCTGTGAGCAAATTGTTTGAGCTACAAATTCATCTTCTGTTGATTATTGATTGGAATCGTCTTCTTCTTCGATTGGTTGCCCTTGATTAAAAGATGAAGAAAATATGGGGAGACAATTATTGGAAGATATTGGTTTTACTGGGAAACTATGGGGCCATTGATATTTTTGTTATTTCTAGTTTTAAGTTATAGCAATCGATAATCCTCTTTGCTGCACAATTTTTTTTTACTAATTATACTGGTTTTGAGAGAACACCCCTCTAATAAACCGTGCTTTTTTTTCTAGAATTAATGGGACTCGTCATAACTTGGAATGGAGCAGCCACTAA

mRNA sequence

ATGAAGAGCCGATGTCTAGGTATAGATGCACCCCCAAAGAAAAACCTAAGCCAGTGGGAGCTCTATCAACTTCCCAAGCATGTTCCGGATTTTGATCTTAATCTTAAATTTCCCCCAACTTCAGACCTTTTTAAGTGGACTTGTTGGATCAGCTTGAGGATTCTTCTAAACCACTTGTCGTTCCCGAAAGACTGGCTTGGCAAAATTAATGGGACTCGTCATAACTTGGAATGGAGCAGCCACTAA

Coding sequence (CDS)

ATGAAGAGCCGATGTCTAGGTATAGATGCACCCCCAAAGAAAAACCTAAGCCAGTGGGAGCTCTATCAACTTCCCAAGCATGTTCCGGATTTTGATCTTAATCTTAAATTTCCCCCAACTTCAGACCTTTTTAAGTGGACTTGTTGGATCAGCTTGAGGATTCTTCTAAACCACTTGTCGTTCCCGAAAGACTGGCTTGGCAAAATTAATGGGACTCGTCATAACTTGGAATGGAGCAGCCACTAA

Protein sequence

MKSRCLGIDAPPKKNLSQWELYQLPKHVPDFDLNLKFPPTSDLFKWTCWISLRILLNHLSFPKDWLGKINGTRHNLEWSSH
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo06811.1Spo06811.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo06811.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo06811.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo06811.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo06811.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045454 cell redox homeostasis
biological_process GO:0006432 phenylalanyl-tRNA aminoacylation
biological_process GO:0009058 biosynthetic process
biological_process GO:0006260 DNA replication
biological_process GO:0090305 nucleic acid phosphodiester bond hydrolysis
biological_process GO:0034655 nucleobase-containing compound catabolic process
biological_process GO:0005975 carbohydrate metabolic process
biological_process GO:0034645 cellular macromolecule biosynthetic process
biological_process GO:0009987 cellular process
biological_process GO:0009094 L-phenylalanine biosynthetic process
biological_process GO:0000162 tryptophan biosynthetic process
biological_process GO:0006470 protein dephosphorylation
biological_process GO:0006571 tyrosine biosynthetic process
biological_process GO:0016049 cell growth
biological_process GO:0000902 cell morphogenesis
biological_process GO:0006888 ER to Golgi vesicle-mediated transport
biological_process GO:0061025 membrane fusion
biological_process GO:0006913 nucleocytoplasmic transport
biological_process GO:0006623 protein targeting to vacuole
biological_process GO:0032482 Rab protein signal transduction
biological_process GO:0044265 cellular macromolecule catabolic process
biological_process GO:0006281 DNA repair
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0006487 protein N-linked glycosylation
biological_process GO:0042967 obsolete acyl-carrier-protein biosynthetic process
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0019048 modulation by virus of host morphology or physiology
biological_process GO:0042546 cell wall biogenesis
biological_process GO:0008152 metabolic process
biological_process GO:0006468 protein phosphorylation
biological_process GO:0016998 cell wall macromolecule catabolic process
biological_process GO:0007020 microtubule nucleation
biological_process GO:0044036 cell wall macromolecule metabolic process
cellular_component GO:0005634 nucleus
cellular_component GO:0005886 plasma membrane
cellular_component GO:0009507 chloroplast
cellular_component GO:0044444 cytoplasmic part
cellular_component GO:0031981 nuclear lumen
cellular_component GO:0005737 cytoplasm
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005794 Golgi apparatus
cellular_component GO:0005789 endoplasmic reticulum membrane
cellular_component GO:0000139 Golgi membrane
cellular_component GO:0005773 vacuole
cellular_component GO:0009328 phenylalanine-tRNA ligase complex
molecular_function GO:0004674 protein serine/threonine kinase activity
molecular_function GO:0000049 tRNA binding
molecular_function GO:0004826 phenylalanine-tRNA ligase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0005515 protein binding
molecular_function GO:0004527 exonuclease activity
molecular_function GO:0004519 endonuclease activity
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding
molecular_function GO:0004721 phosphoprotein phosphatase activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0008080 N-acetyltransferase activity
molecular_function GO:0019003 GDP binding
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo218650.75Barchart | Table
Spo038650.75Barchart | Table
Spo216000.74Barchart | Table
Spo182850.74Barchart | Table
Spo244300.74Barchart | Table
Spo181300.73Barchart | Table
Spo218330.73Barchart | Table
Spo182230.73Barchart | Table
Spo084350.73Barchart | Table
Spo081820.73Barchart | Table
Spo189430.72Barchart | Table
Spo041040.72Barchart | Table
Spo092140.71Barchart | Table
Spo172090.71Barchart | Table
Spo172200.71Barchart | Table
Spo168040.70Barchart | Table
Spo162180.70Barchart | Table
Spo114490.70Barchart | Table
Spo272390.70Barchart | Table
Spo179790.70Barchart | Table
Spo070790.70Barchart | Table
Spo052690.69Barchart | Table
Spo031490.69Barchart | Table
Spo012980.69Barchart | Table
Spo022010.69Barchart | Table
Spo165760.69Barchart | Table
Spo018410.69Barchart | Table
Spo161860.69Barchart | Table
Spo082750.69Barchart | Table
Spo034160.69Barchart | Table
Spo031630.69Barchart | Table
Spo106610.69Barchart | Table
Spo052270.68Barchart | Table
Spo007160.68Barchart | Table
Spo028550.68Barchart | Table
Spo039840.68Barchart | Table
Spo001460.68Barchart | Table
Spo105680.68Barchart | Table
Spo131610.68Barchart | Table
Spo255730.68Barchart | Table
Spo261310.68Barchart | Table
Spo081470.67Barchart | Table
Spo065800.67Barchart | Table
Spo173860.67Barchart | Table
Spo132380.67Barchart | Table
Spo237450.67Barchart | Table
Spo179800.67Barchart | Table
Spo006530.67Barchart | Table
Spo040820.67Barchart | Table
Spo109650.67Barchart | Table
Spo209300.67Barchart | Table
Spo196900.67Barchart | Table
Spo200450.67Barchart | Table
Spo255750.67Barchart | Table
Spo115340.67Barchart | Table
Spo134920.67Barchart | Table
Spo233800.66Barchart | Table
Spo142400.66Barchart | Table
Spo146300.66Barchart | Table
Spo146950.66Barchart | Table
Spo158420.66Barchart | Table
Spo159960.66Barchart | Table
Spo104210.66Barchart | Table
Spo098420.66Barchart | Table
Spo096840.66Barchart | Table
Spo175490.66Barchart | Table
Spo056030.66Barchart | Table
Spo037350.66Barchart | Table
Spo016060.66Barchart | Table
Spo232370.66Barchart | Table
Spo233260.66Barchart | Table
Spo002830.66Barchart | Table
Spo247360.66Barchart | Table
Spo248410.66Barchart | Table
Spo253300.66Barchart | Table
Spo001730.66Barchart | Table
Spo022800.66Barchart | Table
Spo035050.65Barchart | Table
Spo237720.65Barchart | Table
Spo121070.65Barchart | Table
Spo053070.65Barchart | Table
Spo125430.65Barchart | Table
Spo133180.65Barchart | Table
Spo145890.65Barchart | Table
Spo144030.65Barchart | Table