Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGAATTAAGTGTGGTGTCAGCGCTAAAGTATCCAGTGAAATTCAAATTCTTTTGAATATCTCATCATCTTCAGTCTTCCTCAGTCCTAGACAGTACTACCAGAAAAAGAGAAAAAAAAAAAAAAGTAGTGAGGAGAGAGAAAGCAGAAGATCTTCAAAAATGGCGGAGAGAGCAAGAGCTGGTCAAAAATCTCACACATCAACAGCTGATCTACTCACTTGGACCGAAGCATCTTCGTATGATTCACCTGCTCCTTCCTCCGCCTCTCGTTCTCACCAGGTTCTTTTTCCGATAATTACAATTAGAAATTAATTCAATAATTTTTCTTTATGGTTCATTTTTTCTATTTGATAGCTTGCTAAATTAATTAATTTACTTATTGATTGTGTTGTTTGATTTGAACCTCAGCCGTCGGACGGGGTGAGTAAGGTGTTGTTTGGTGGTCAGATCACTGAGGAGGAAGCTCAGAGTCTTGCTTCGAGGTTTATGATCTGCTTTTCTTTTCTCCATATATTGTTTTCTTCCAATTTGATGGAGTATTTTTGCTGCAGTCTGTGCTTTGATTCCTTTAAATTATTAGATTAATCTAAATAATAACTATAATGATCCCTATATTGCAGTGGGAAGCATTACATCTGGTAATTGGAGTTTGTTGAGATGTAATGCTTCCAACAGTCTACCAAAACGACTCAACAAATCATTAATTTGCTAATATTGGATTTGCTGTTTGGTAGATTTGCTAAATGGGTGTAGTTAATGTCCGAGTTTCTTTCTAGAGATTGTTAGTTTCCGGATTTTTAGGTTAAGTTTAGAGCCAACGAGGGAAAATATTATAGTAAGTTGAGATAAGTAGATTTCACGCCAAAAGAACACACCCTAATGTTAATACTTGGAAGCATTGAAGTCCATAAATTTAAAGTTGTTTATATCAAGAGGTTTCATAGAAGTCCATCTTATATAAGCTTGCATGTATGGTAGAATCTTCACACTAATTCATGAATCAGTGTAGCGATTGCAGATTTCGTTTAAGCTCCTACTTTCTTTAAAATGGTACTTTCTCCGTTGCAACACTTTTAGTTTTGCCACTATTCATATACCAACTTTGACCATATAAAGTGAAAGGTCGTTGAATTGGTCTCACTATGTACTTTCATAATGTTAAATTTTAAGTTTCTTTTAGAACAAGATAATTAGAGATAATTATGGCCAAAGTTATACCTCGGAAAACGTGCTAGTCAAATCATTCAAGACTATCTATTTGCGTTTGTTAGCTACTTCCCATACTATGCCCTTTCTATTTTCGTCAACAAAACACCAACATGCATGATTTAAACATGCTCAAAAGATGCCCAGATACAGAATTTCCAAATTTGGTTGATAGTTAAGCCCTTATCTTGTTTATTTAGTGTCCCCTCAATTTTTGATTGATTTGATTTCCTTCAAATCATGATAATCTTGTTGATGTTGGAGCTCAAGTTGCATTTAAAATCTGATTGAGGCACTACAATATCCCAAACACACCTTCTTCTTGATTCATGACTGAAACCTTTGTTGTTCATCATATTGGTTATGCACTTATGCTGCCTAGCTATATGGCCTATGTCTTATCTAGTTTTGTTGAATATCCACCTCAGATCAGTCATTTTGGCACATTGGTTTGTCATTCTTCATACTCAAGAAAAGAACATGACCAGCAGGTCCAGCACAAACCAATTCGTCATATGGACTGTTGGTCTATGCTAATCCAGCTACATCAATATGGTTTTGTTAAAATATCTTGTATGATCCAAATTCATCTGCTTTTAAAAGATATACGACGTATATTTATTCCTTGCTCTTGTTATAGTAATATGCTGCACTGATTCTTATTAGACTAATCAGTGATTCTTCAGAACATCTGGATCATTTACTTCTCTGTATAACCGGCCTATTTATTTTCTACTTCAGGAAGCCTTGTTCCGGATATAAAATGAAGGAAATGACTGGAAGTGGAATATTTGCTGGATCTGGTGATGATTCTACAACAGAATCTGGTAGTGCTAATCCCCATTCTAATAAAACTGGATTGCGCGTTTATCAGGTTTATTCTAATTTATATACTTCGTATAAAGTACTTCGTATATTTTACTGTAAGAAGTTAAGAACACACCAGAGCAACTCTTGACTCACACTGTTGTAACTCTAAACCTGCAGCAAGCTGTTAATGGAATTAGCCAGATTTCTTTTAGTGTTGACGAAAGTGTGACTCCCAAGAAACCCACATCTGTACCGGAAGTTGCAAAGCAACGCGAACTGAGTGGCACTCTAGAAGCAGAGGCAGACTCAAGGATCAAAAAGGGATTGTCAGATGCCAAGTGTAAGGAGCTCAGTGGAAATGACATTTTTGGCCCACCACCAGAAAATCCTCCTCGTTCATTGGCTGCTGCGCGTTCATTGGAGTCAAAAGAAAAGGACATGGGAGAGCCAGCGCCGCGAGCTGTCCGGACCTCCGTTAGAGTTTCCAATGTGAGTATATTTCGTGTATATATCTTTTACTTCTCCGATTCTCCTGAGTTTGTTTACCCCCTATCCTATCCTATATTCCTATTTGTTTGCTCAGAAACGCTTATAAGTTATAACATCTTAACTGTTGATTGCCTTGAGCTTGCTGGGTGTACTTATAGGACAACTGTTACAGGAAGGTAGGGTCTAAAGTGGCCTAACAGAATATGAACATCTAAATATGAAAAATTCCATGTGTGTTTACAGCTAGTTTCCTGCACAGTAAGTAGGTTATTGATAAAGCATTTGATCCCTTTGTAGCCTGCGGGAGGGCAGAGTAATATTATGTTTGGTGATGAACCTGTGGTGAAGTCATCAAGAAAGCTTCATGATCAGAAGTTCCAAGAACTGACTGGTAACGATATATTCAAAGGGGATGCACCTGAAGGGTCAACAGAGAAGTCTCTCAGCAAGGCCAAGCTGAGAGAGATGAGTGGCAGCAATATATTTGCCGAGGGAGAGAAAGTGGAACCCCGAGATTATTTTGGTGGTGTTCGCAAGCCACCTGGCGGGGAAAGCAGCATTGCTTTGGTTTAACCGAGATCCTACGCTGCTAACCATGGCTTATGGCTATATATTGACCAACTTTTATCTGTAGGATCAATGAAGGCTCTTCCTGCCTTCTATGCCACTGCCCTTTGAGGGGTTTGTGAGCTAGTTATAGTTAGCTTAACCATCACGGTAGTAGGTTTTAGCTTTGTAACCTGAATAAATTAGCTTCAGACTATGGCATTATGCCATTATGTTAATTTTAAGGATTTCTGCATGCTCTGTGGCTATATTAGCAGAATCCTCTTATGTATGATTGTATTTTACCTTCAAATCCTCCTTTCATGTATGACTATACGTTTACCGCCAGTTCATGTTGCCTGATTGCTGTATGCTGATTAGTGACTAGCTCTATCTCACCATACGTTCACATTCTTTTTCTTGCAAAGCCCTTAAACAAAGTAAAGAAACAAACCGCTACAGAAAATCGGAAAATCACCTTTTGTTATGATAGAACTCCGTAGTTGGGCCAACCAATCA TGAATTAAGTGTGGTGTCAGCGCTAAAGTATCCAGTGAAATTCAAATTCTTTTGAATATCTCATCATCTTCAGTCTTCCTCAGTCCTAGACAGTACTACCAGAAAAAGAGAAAAAAAAAAAAAAGTAGTGAGGAGAGAGAAAGCAGAAGATCTTCAAAAATGGCGGAGAGAGCAAGAGCTGGTCAAAAATCTCACACATCAACAGCTGATCTACTCACTTGGACCGAAGCATCTTCGTATGATTCACCTGCTCCTTCCTCCGCCTCTCGTTCTCACCAGCCGTCGGACGGGGTGAGTAAGGTGTTGTTTGGTGGTCAGATCACTGAGGAGGAAGCTCAGAGTCTTGCTTCGAGGAAGCCTTGTTCCGGATATAAAATGAAGGAAATGACTGGAAGTGGAATATTTGCTGGATCTGGTGATGATTCTACAACAGAATCTGGTAGTGCTAATCCCCATTCTAATAAAACTGGATTGCGCGTTTATCAGCAAGCTGTTAATGGAATTAGCCAGATTTCTTTTAGTGTTGACGAAAGTGTGACTCCCAAGAAACCCACATCTGTACCGGAAGTTGCAAAGCAACGCGAACTGAGTGGCACTCTAGAAGCAGAGGCAGACTCAAGGATCAAAAAGGGATTGTCAGATGCCAAGTGTAAGGAGCTCAGTGGAAATGACATTTTTGGCCCACCACCAGAAAATCCTCCTCGTTCATTGGCTGCTGCGCGTTCATTGGAGTCAAAAGAAAAGGACATGGGAGAGCCAGCGCCGCGAGCTGTCCGGACCTCCGTTAGAGTTTCCAATCCTGCGGGAGGGCAGAGTAATATTATGTTTGGTGATGAACCTGTGGTGAAGTCATCAAGAAAGCTTCATGATCAGAAGTTCCAAGAACTGACTGGTAACGATATATTCAAAGGGGATGCACCTGAAGGGTCAACAGAGAAGTCTCTCAGCAAGGCCAAGCTGAGAGAGATGAGTGGCAGCAATATATTTGCCGAGGGAGAGAAAGTGGAACCCCGAGATTATTTTGGTGGTGTTCGCAAGCCACCTGGCGGGGAAAGCAGCATTGCTTTGGTTTAACCGAGATCCTACGCTGCTAACCATGGCTTATGGCTATATATTGACCAACTTTTATCTGTAGGATCAATGAAGGCTCTTCCTGCCTTCTATGCCACTGCCCTTTGAGGGGTTTGTGAGCTAGTTATAGTTAGCTTAACCATCACGGTAGTAGGTTTTAGCTTTGTAACCTGAATAAATTAGCTTCAGACTATGGCATTATGCCATTATGTTAATTTTAAGGATTTCTGCATGCTCTGTGGCTATATTAGCAGAATCCTCTTATGTATGATTGTATTTTACCTTCAAATCCTCCTTTCATGTATGACTATACGTTTACCGCCAGTTCATGTTGCCTGATTGCTGTATGCTGATTAGTGACTAGCTCTATCTCACCATACGTTCACATTCTTTTTCTTGCAAAGCCCTTAAACAAAGTAAAGAAACAAACCGCTACAGAAAATCGGAAAATCACCTTTTGTTATGATAGAACTCCGTAGTTGGGCCAACCAATCA ATGGCGGAGAGAGCAAGAGCTGGTCAAAAATCTCACACATCAACAGCTGATCTACTCACTTGGACCGAAGCATCTTCGTATGATTCACCTGCTCCTTCCTCCGCCTCTCGTTCTCACCAGCCGTCGGACGGGGTGAGTAAGGTGTTGTTTGGTGGTCAGATCACTGAGGAGGAAGCTCAGAGTCTTGCTTCGAGGAAGCCTTGTTCCGGATATAAAATGAAGGAAATGACTGGAAGTGGAATATTTGCTGGATCTGGTGATGATTCTACAACAGAATCTGGTAGTGCTAATCCCCATTCTAATAAAACTGGATTGCGCGTTTATCAGCAAGCTGTTAATGGAATTAGCCAGATTTCTTTTAGTGTTGACGAAAGTGTGACTCCCAAGAAACCCACATCTGTACCGGAAGTTGCAAAGCAACGCGAACTGAGTGGCACTCTAGAAGCAGAGGCAGACTCAAGGATCAAAAAGGGATTGTCAGATGCCAAGTGTAAGGAGCTCAGTGGAAATGACATTTTTGGCCCACCACCAGAAAATCCTCCTCGTTCATTGGCTGCTGCGCGTTCATTGGAGTCAAAAGAAAAGGACATGGGAGAGCCAGCGCCGCGAGCTGTCCGGACCTCCGTTAGAGTTTCCAATCCTGCGGGAGGGCAGAGTAATATTATGTTTGGTGATGAACCTGTGGTGAAGTCATCAAGAAAGCTTCATGATCAGAAGTTCCAAGAACTGACTGGTAACGATATATTCAAAGGGGATGCACCTGAAGGGTCAACAGAGAAGTCTCTCAGCAAGGCCAAGCTGAGAGAGATGAGTGGCAGCAATATATTTGCCGAGGGAGAGAAAGTGGAACCCCGAGATTATTTTGGTGGTGTTCGCAAGCCACCTGGCGGGGAAAGCAGCATTGCTTTGGTTTAA MAERARAGQKSHTSTADLLTWTEASSYDSPAPSSASRSHQPSDGVSKVLFGGQITEEEAQSLASRKPCSGYKMKEMTGSGIFAGSGDDSTTESGSANPHSNKTGLRVYQQAVNGISQISFSVDESVTPKKPTSVPEVAKQRELSGTLEAEADSRIKKGLSDAKCKELSGNDIFGPPPENPPRSLAAARSLESKEKDMGEPAPRAVRTSVRVSNPAGGQSNIMFGDEPVVKSSRKLHDQKFQELTGNDIFKGDAPEGSTEKSLSKAKLREMSGSNIFAEGEKVEPRDYFGGVRKPPGGESSIALV Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo06731.1 vs. NCBI nr
Match: gi|902225029|gb|KNA19943.1| (hypothetical protein SOVF_056840 [Spinacia oleracea]) HSP 1 Score: 585.5 bits (1508), Expect = 5.400e-164 Identity = 304/304 (100.00%), Postives = 304/304 (100.00%), Query Frame = 1
BLAST of Spo06731.1 vs. NCBI nr
Match: gi|731338884|ref|XP_010680556.1| (PREDICTED: uncharacterized protein LOC104895683 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 498.4 bits (1282), Expect = 8.700e-138 Identity = 264/305 (86.56%), Postives = 283/305 (92.79%), Query Frame = 1
BLAST of Spo06731.1 vs. NCBI nr
Match: gi|731438661|ref|XP_010647631.1| (PREDICTED: uncharacterized protein LOC104878720 [Vitis vinifera]) HSP 1 Score: 425.2 bits (1092), Expect = 9.300e-116 Identity = 226/307 (73.62%), Postives = 261/307 (85.02%), Query Frame = 1
BLAST of Spo06731.1 vs. NCBI nr
Match: gi|719969340|ref|XP_010268114.1| (PREDICTED: uncharacterized protein LOC104605175 isoform X1 [Nelumbo nucifera]) HSP 1 Score: 421.4 bits (1082), Expect = 1.300e-114 Identity = 224/310 (72.26%), Postives = 258/310 (83.23%), Query Frame = 1
BLAST of Spo06731.1 vs. NCBI nr
Match: gi|641837633|gb|KDO56584.1| (hypothetical protein CISIN_1g022179mg [Citrus sinensis]) HSP 1 Score: 420.6 bits (1080), Expect = 2.300e-114 Identity = 223/298 (74.83%), Postives = 259/298 (86.91%), Query Frame = 1
BLAST of Spo06731.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RKB8_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_056840 PE=4 SV=1) HSP 1 Score: 585.5 bits (1508), Expect = 3.800e-164 Identity = 304/304 (100.00%), Postives = 304/304 (100.00%), Query Frame = 1
BLAST of Spo06731.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C9V2_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g135170 PE=4 SV=1) HSP 1 Score: 498.4 bits (1282), Expect = 6.000e-138 Identity = 264/305 (86.56%), Postives = 283/305 (92.79%), Query Frame = 1
BLAST of Spo06731.1 vs. UniProtKB/TrEMBL
Match: A0A067EN26_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g022179mg PE=4 SV=1) HSP 1 Score: 420.6 bits (1080), Expect = 1.600e-114 Identity = 223/298 (74.83%), Postives = 259/298 (86.91%), Query Frame = 1
BLAST of Spo06731.1 vs. UniProtKB/TrEMBL
Match: V4SL91_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026169mg PE=4 SV=1) HSP 1 Score: 419.5 bits (1077), Expect = 3.600e-114 Identity = 223/298 (74.83%), Postives = 258/298 (86.58%), Query Frame = 1
BLAST of Spo06731.1 vs. UniProtKB/TrEMBL
Match: A0A067LEN8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24051 PE=4 SV=1) HSP 1 Score: 417.2 bits (1071), Expect = 1.800e-113 Identity = 218/303 (71.95%), Postives = 260/303 (85.81%), Query Frame = 1
BLAST of Spo06731.1 vs. ExPASy Swiss-Prot
Match: ALKB2_ARATH (DNA oxidative demethylase ALKBH2 OS=Arabidopsis thaliana GN=ALKBH2 PE=2 SV=2) HSP 1 Score: 53.9 bits (128), Expect = 3.500e-6 Identity = 33/62 (53.23%), Postives = 47/62 (75.81%), Query Frame = 1
BLAST of Spo06731.1 vs. TAIR (Arabidopsis)
Match: AT4G39860.1 (unknown protein) HSP 1 Score: 360.1 bits (923), Expect = 1.300e-99 Identity = 194/302 (64.24%), Postives = 231/302 (76.49%), Query Frame = 1
BLAST of Spo06731.1 vs. TAIR (Arabidopsis)
Match: AT1G78150.3 (unknown protein) HSP 1 Score: 273.9 bits (699), Expect = 1.200e-73 Identity = 167/334 (50.00%), Postives = 216/334 (64.67%), Query Frame = 1
BLAST of Spo06731.1 vs. TAIR (Arabidopsis)
Match: AT1G35780.1 (unknown protein) HSP 1 Score: 260.8 bits (665), Expect = 1.100e-69 Identity = 157/303 (51.82%), Postives = 205/303 (67.66%), Query Frame = 1
BLAST of Spo06731.1 vs. TAIR (Arabidopsis)
Match: AT2G22270.1 (unknown protein) HSP 1 Score: 229.2 bits (583), Expect = 3.500e-60 Identity = 157/328 (47.87%), Postives = 204/328 (62.20%), Query Frame = 1
BLAST of Spo06731.1 vs. TAIR (Arabidopsis)
Match: AT2G22260.1 (oxidoreductase, 2OG-Fe(II) oxygenase family protein) HSP 1 Score: 53.9 bits (128), Expect = 2.000e-7 Identity = 33/62 (53.23%), Postives = 47/62 (75.81%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo06731.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo06731.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo06731.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 1
BLAST of Spo06731.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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