Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CAGATACCTGGGTAATCGGGATATCCTCATTCTCGCGCTTTCTCAACGGTTCCATTCAACTCTCATTTCACCATTTCACTCCCTCCGGTATCATGGTGGAACCTCACACCACGACCACCGTCGCTGCCGCCAACGCCACCACAACCACTCGCTTCGGCATCCTAGGATGCGCTGGGATCGCCCGCAAAGTCTCCCGCGCGATCACTCTCTCTCCAAACTCCACCCTCCACGCCATCGGCAGCCGTTCCATCGAGAAAGCCCGAACGTACGCCACCGCTAACGGCTTCCCCTCGTCCACTAAAATCTACGGAAGCTACGACGAAGTCCTCGACGACCCAGAAATCGATGCGGTGTACATCCCTTTACCTACTAGCCTCCACCTCCATTGGGTGGTTCGTGCGGCGGAGAAGAAAAAACATGTTCTTGTTGAGAAACCCCCTGCTTTAAATGTTAAAGAATTGGATGTGATTTTGAACGCTTGTGAGGTTAATGGGGTTCAATTTATGGATGGCACAATGTGGATGCACCACCCACGGACTAAAATTATGGCTGATTTTTTGGGTAATTCTCAGCTTTTCGGCCAGCTCAAGGCTGTAAGTATCGTTCTAAACTAATACTCCCTCCGTTTCTAAATAAATATTCATAAATTACGATCGTTTTTCATACACATCTTACACTTTTACCATTTTTCCATCCCACTTCTCATTTTTGTAATTCCTGCACATTCTTCTAGATAGTATACTTATTTAGGGACTGAGGGAGTACGAAGTATCAATTTTTGTTTTGTTTTTCTTTGTTTAGTTTTATTGATTGATGGATTCAATTGTAAATTTAAATGTATTCTTGGGTTAAATTCAAGTGAAATGATGATTAATAGTGATAATTGTAATTGCAGTAGTAAAATTGACATTTGATTCGGGTAAGATAGATTTGGGGAACAGGGTGCAAGTGCTTAAAAATTGATAGTGGTGTGGAAACAATAATTTACAGGCGGCAGGATTATTTATGAGGCGGATACTAAAAGCTTGTATAATGTAAGTAGCTTGATAGTTTGCTGAGGCCATGTTTGTGGATTTCATTGAGGACAATAAGTTTGTTTTTGGACTAACATCTAGAGGACCCTTGTTTCCATTGCATTCCATATTGATGCGTCCAAACAAGAGGTTAATGTGTTTCTTGTATTATGAGGGCATGAAACACTGTTGTCTAAAATGCTCATGAACTAGCTGTGCCTGTCACTTTCCAGCTATGTATTGTACAGCATACACAAGAATCCTCTGTACAAGTATTGACTATTAATCCTAGAGGACCTAGAATGTCAAAGAACCTTGAACACCATACTTATTAATTGATCACAATGTTAGTGTTTTAGTACCCTGATACACGAATAGCAAACAATCAGGAAAGAAAGTTAATGTTCAAAGCCTACCAACTGTCAGGCCTGCGGTTTGACTTTTTGAGGTTTATTGCTGATATCTTGGAGGTAAAGGCAACTGATGTTTGAAATTATTGCAGAAAGCTTGATGTAGACTAGTGTTGGCATACCACTTTATTACAGAACAGAGTACAATGAGCTCTTGGTGGCATTTAATACCATTTTGTAGGTCTCTTTTATGCAGTGTGCACTGTGCAGTATTGGAGCTTGTCTGTTGTATTGCTTAGAGTCTTCATTTTACCTCAAGTACTTGTGTCAGATCCTCAAACACTTGGACATGGGTATGGACACTGGACACTTCATTTTGGACCAAAGCCATGAATTTTTTTCACAAAATGGCCGAGTCAGACACTTGGCACGTACTCGTGTCCGAGTAACGTAGGTTGCATGTACTAAAAGGATGATAGTTTCTTATTTCATGAAAAGGAATTGGTTTAGAAGAGGTGCATTCCAGAAACAGGTTTCTGTAATAAATAACAGAATCATGTATGTTTCACAGTGAGATTAATTATGACACCCTTCTTTACTGTTTATTGCCATTGCCAGAAAGCCTAGATCCCGTTAAGTACTCTTCTGTCCCGAGACTCCCACGTTGGGTAAAATCATTTGAGTGATTTTTTATGTTTGGGACAGATATTCGTGTTCCTTTCTGTCACTATCTTATTGTGATATTATTCCTAATGTCTGTTAATTGTTACTCGGCCTATAAATTGTTTGTTTGTACCAAAACATCTTTCTTGCGGCTTAACGCTAAGGTGAATTTCAGGTAGAACCAATTATGATGTATGGCTTTGTGCTAGAAGTCCGAAACTCCAAATTTCCATCGTCGATCATGTGTTAGGACGTAACTCACGTTAGTGTAGTTGGAATGAGGAATCAAAATCAAACCTAATTATTGAGAGTTGAGGGATAAATTTTGTGAAGTGCTGAATTTGTGTTAGGATTTTTACTTGATTATATGTATTTTCATTACTGAGGTCTATGCTAGTTGTGGTGCTAAATGATGAATGTTTCTGGTATTCACATATGCCTTGTTTGAGGTTAAGTATTTATTGAGGGGGACACAGTGTCACGGTTCGAATTTTTTGGGCACCGGATCGTGCGGAAGGTTGGGTGAGTTTTTTTGAACCAGATTTTAGTATTTTACTGAAGGTTGGGTGAGTTTTTTTGAAGGGAAGATTGAGTGAACCTCTTAGCTTGGAGATCAGGGGAAAAAAGATTTAGGCTCTTCTCACCCTCGGTGTAAAAAAGAACCGAGAGAATCTTTTAATACCCAATATGATTTATAGGGTCTTAAGTATCGATTATTATAAAGGAAATGCTGACACGTTAGATCATAAATTTCTTGCTACATTGGGCTTCTTGCAATGTTTGTTTGATCGCCTTGTTGCTTATCTTAAGTTGTGATCAATCAGAGGATCTATTCTGATAGAGTCCTGGTGTTTACAGGTACAATCATCCTTCACCTTTTCTGCAGACAGTGAGTTCCTTGAAAATGACATCCGGGTGAAACCCGATCTTGATGCCCTTGGTGCTCTGGGTGATGCTGGCTGGTACTGCATCAGGGCATGTCTGTGGGCTGCAAATTATGAACTGCCAAAGTTTGTGACTGCTCTAAGGAATCCCATTAAGAATTCTGTTGGGGTGTTGTTATCTGTTGATGCTTCTTTGCACTGGGAAGATGGTAAAGTAGCCACCTTCCACTGCTCTTTTCTCTCCAACTTAACCATGGATATAACAGCTATTGGCACCAAAGGAACCTTGCGAGTTAATGATTTCATTATTCCATATAAAGAAGCGGAGGCCTCATTTTCAACAGTATCTGAAGCTTGGTTCACTGACATGGACTTGGAATGGAATCGAAAACCAAGTGAGCACATTGTGAGTGCGGATCTTCCCCAGGAAGCTCTTTTGGTTAAGGAGTTTTCGGCTTTGGTTGATGCTATAAAACACGGTGGTGCCCTAGCACCAGAGAATAAGTGGCCTACTCTTAGTAGGAAAACTCAACTTATAATCGATGCAGTAGTTGCTTCCATTGATAAAGGCTTTCTGCCTGTCGAGGTGGTCTACTGATTGTCAATAATTGTCCTTGGTAGTGTAAATTCGACGCTTGTGTTCTCTTTTGTTGCCTACTGTTGGTCGGTCTTAAATTCTTAATACATACTAATATACTATTGTATTATGGAACTGCTAAAGCATTTACTTGCATTCTTTTGTCCTGTTTTGCTAGGACAATAAGCTAAGCTGGTACAGTTGA CAGATACCTGGGTAATCGGGATATCCTCATTCTCGCGCTTTCTCAACGGTTCCATTCAACTCTCATTTCACCATTTCACTCCCTCCGGTATCATGGTGGAACCTCACACCACGACCACCGTCGCTGCCGCCAACGCCACCACAACCACTCGCTTCGGCATCCTAGGATGCGCTGGGATCGCCCGCAAAGTCTCCCGCGCGATCACTCTCTCTCCAAACTCCACCCTCCACGCCATCGGCAGCCGTTCCATCGAGAAAGCCCGAACGTACGCCACCGCTAACGGCTTCCCCTCGTCCACTAAAATCTACGGAAGCTACGACGAAGTCCTCGACGACCCAGAAATCGATGCGGTGTACATCCCTTTACCTACTAGCCTCCACCTCCATTGGGTGGTTCGTGCGGCGGAGAAGAAAAAACATGTTCTTGTTGAGAAACCCCCTGCTTTAAATGTTAAAGAATTGGATGTGATTTTGAACGCTTGTGAGGTTAATGGGGTTCAATTTATGGATGGCACAATGTGGATGCACCACCCACGGACTAAAATTATGGCTGATTTTTTGGGTAATTCTCAGCTTTTCGGCCAGCTCAAGGCTGTACAATCATCCTTCACCTTTTCTGCAGACAGTGAGTTCCTTGAAAATGACATCCGGGTGAAACCCGATCTTGATGCCCTTGGTGCTCTGGGTGATGCTGGCTGGTACTGCATCAGGGCATGTCTGTGGGCTGCAAATTATGAACTGCCAAAGTTTGTGACTGCTCTAAGGAATCCCATTAAGAATTCTGTTGGGGTGTTGTTATCTGTTGATGCTTCTTTGCACTGGGAAGATGGTAAAGTAGCCACCTTCCACTGCTCTTTTCTCTCCAACTTAACCATGGATATAACAGCTATTGGCACCAAAGGAACCTTGCGAGTTAATGATTTCATTATTCCATATAAAGAAGCGGAGGCCTCATTTTCAACAGTATCTGAAGCTTGGTTCACTGACATGGACTTGGAATGGAATCGAAAACCAAGTGAGCACATTGTGAGTGCGGATCTTCCCCAGGAAGCTCTTTTGGTTAAGGAGTTTTCGGCTTTGGTTGATGCTATAAAACACGGTGGTGCCCTAGCACCAGAGAATAAGTGGCCTACTCTTAGTAGGAAAACTCAACTTATAATCGATGCAGTAGTTGCTTCCATTGATAAAGGCTTTCTGCCTGTCGAGGACAATAAGCTAAGCTGGTACAGTTGA ATGGTGGAACCTCACACCACGACCACCGTCGCTGCCGCCAACGCCACCACAACCACTCGCTTCGGCATCCTAGGATGCGCTGGGATCGCCCGCAAAGTCTCCCGCGCGATCACTCTCTCTCCAAACTCCACCCTCCACGCCATCGGCAGCCGTTCCATCGAGAAAGCCCGAACGTACGCCACCGCTAACGGCTTCCCCTCGTCCACTAAAATCTACGGAAGCTACGACGAAGTCCTCGACGACCCAGAAATCGATGCGGTGTACATCCCTTTACCTACTAGCCTCCACCTCCATTGGGTGGTTCGTGCGGCGGAGAAGAAAAAACATGTTCTTGTTGAGAAACCCCCTGCTTTAAATGTTAAAGAATTGGATGTGATTTTGAACGCTTGTGAGGTTAATGGGGTTCAATTTATGGATGGCACAATGTGGATGCACCACCCACGGACTAAAATTATGGCTGATTTTTTGGGTAATTCTCAGCTTTTCGGCCAGCTCAAGGCTGTACAATCATCCTTCACCTTTTCTGCAGACAGTGAGTTCCTTGAAAATGACATCCGGGTGAAACCCGATCTTGATGCCCTTGGTGCTCTGGGTGATGCTGGCTGGTACTGCATCAGGGCATGTCTGTGGGCTGCAAATTATGAACTGCCAAAGTTTGTGACTGCTCTAAGGAATCCCATTAAGAATTCTGTTGGGGTGTTGTTATCTGTTGATGCTTCTTTGCACTGGGAAGATGGTAAAGTAGCCACCTTCCACTGCTCTTTTCTCTCCAACTTAACCATGGATATAACAGCTATTGGCACCAAAGGAACCTTGCGAGTTAATGATTTCATTATTCCATATAAAGAAGCGGAGGCCTCATTTTCAACAGTATCTGAAGCTTGGTTCACTGACATGGACTTGGAATGGAATCGAAAACCAAGTGAGCACATTGTGAGTGCGGATCTTCCCCAGGAAGCTCTTTTGGTTAAGGAGTTTTCGGCTTTGGTTGATGCTATAAAACACGGTGGTGCCCTAGCACCAGAGAATAAGTGGCCTACTCTTAGTAGGAAAACTCAACTTATAATCGATGCAGTAGTTGCTTCCATTGATAAAGGCTTTCTGCCTGTCGAGGACAATAAGCTAAGCTGGTACAGTTGA MVEPHTTTTVAAANATTTTRFGILGCAGIARKVSRAITLSPNSTLHAIGSRSIEKARTYATANGFPSSTKIYGSYDEVLDDPEIDAVYIPLPTSLHLHWVVRAAEKKKHVLVEKPPALNVKELDVILNACEVNGVQFMDGTMWMHHPRTKIMADFLGNSQLFGQLKAVQSSFTFSADSEFLENDIRVKPDLDALGALGDAGWYCIRACLWAANYELPKFVTALRNPIKNSVGVLLSVDASLHWEDGKVATFHCSFLSNLTMDITAIGTKGTLRVNDFIIPYKEAEASFSTVSEAWFTDMDLEWNRKPSEHIVSADLPQEALLVKEFSALVDAIKHGGALAPENKWPTLSRKTQLIIDAVVASIDKGFLPVEDNKLSWYS Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo06714.1 vs. NCBI nr
Match: gi|902169875|gb|KNA07724.1| (hypothetical protein SOVF_169260 [Spinacia oleracea]) HSP 1 Score: 749.6 bits (1934), Expect = 2.700e-213 Identity = 371/371 (100.00%), Postives = 371/371 (100.00%), Query Frame = 1
BLAST of Spo06714.1 vs. NCBI nr
Match: gi|731375349|ref|XP_010667224.1| (PREDICTED: uncharacterized oxidoreductase At4g09670 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 584.7 bits (1506), Expect = 1.100e-163 Identity = 288/356 (80.90%), Postives = 312/356 (87.64%), Query Frame = 1
BLAST of Spo06714.1 vs. NCBI nr
Match: gi|1009137514|ref|XP_015886092.1| (PREDICTED: uncharacterized oxidoreductase At4g09670-like [Ziziphus jujuba]) HSP 1 Score: 517.7 bits (1332), Expect = 1.700e-143 Identity = 243/360 (67.50%), Postives = 293/360 (81.39%), Query Frame = 1
BLAST of Spo06714.1 vs. NCBI nr
Match: gi|697118715|ref|XP_009613295.1| (PREDICTED: uncharacterized oxidoreductase At4g09670-like [Nicotiana tomentosiformis]) HSP 1 Score: 512.7 bits (1319), Expect = 5.500e-142 Identity = 246/357 (68.91%), Postives = 290/357 (81.23%), Query Frame = 1
BLAST of Spo06714.1 vs. NCBI nr
Match: gi|698507495|ref|XP_009799087.1| (PREDICTED: uncharacterized oxidoreductase At4g09670 [Nicotiana sylvestris]) HSP 1 Score: 511.9 bits (1317), Expect = 9.400e-142 Identity = 243/357 (68.07%), Postives = 290/357 (81.23%), Query Frame = 1
BLAST of Spo06714.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QKF6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_169260 PE=4 SV=1) HSP 1 Score: 749.6 bits (1934), Expect = 1.900e-213 Identity = 371/371 (100.00%), Postives = 371/371 (100.00%), Query Frame = 1
BLAST of Spo06714.1 vs. UniProtKB/TrEMBL
Match: A0A0J8B6X8_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_007450 PE=4 SV=1) HSP 1 Score: 584.7 bits (1506), Expect = 8.000e-164 Identity = 288/356 (80.90%), Postives = 312/356 (87.64%), Query Frame = 1
BLAST of Spo06714.1 vs. UniProtKB/TrEMBL
Match: I1JD96_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_02G076500 PE=4 SV=1) HSP 1 Score: 510.0 bits (1312), Expect = 2.500e-141 Identity = 238/356 (66.85%), Postives = 292/356 (82.02%), Query Frame = 1
BLAST of Spo06714.1 vs. UniProtKB/TrEMBL
Match: A5ASV7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g01490 PE=4 SV=1) HSP 1 Score: 503.4 bits (1295), Expect = 2.300e-139 Identity = 246/357 (68.91%), Postives = 286/357 (80.11%), Query Frame = 1
BLAST of Spo06714.1 vs. UniProtKB/TrEMBL
Match: K4DG11_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1) HSP 1 Score: 502.3 bits (1292), Expect = 5.200e-139 Identity = 239/357 (66.95%), Postives = 291/357 (81.51%), Query Frame = 1
BLAST of Spo06714.1 vs. ExPASy Swiss-Prot
Match: Y4967_ARATH (Uncharacterized oxidoreductase At4g09670 OS=Arabidopsis thaliana GN=At4g09670 PE=1 SV=1) HSP 1 Score: 473.8 bits (1218), Expect = 1.800e-132 Identity = 220/351 (62.68%), Postives = 279/351 (79.49%), Query Frame = 1
BLAST of Spo06714.1 vs. ExPASy Swiss-Prot
Match: YMO1_RHIML (Uncharacterized oxidoreductase ORF334 OS=Rhizobium meliloti PE=3 SV=1) HSP 1 Score: 143.3 bits (360), Expect = 5.500e-33 Identity = 116/351 (33.05%), Postives = 178/351 (50.71%), Query Frame = 1
BLAST of Spo06714.1 vs. ExPASy Swiss-Prot
Match: XDH2_HALVD (D-xylose 1-dehydrogenase (NADP(+)) 2 OS=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) GN=HVO_B0029 PE=1 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 1.100e-25 Identity = 90/272 (33.09%), Postives = 127/272 (46.69%), Query Frame = 1
BLAST of Spo06714.1 vs. ExPASy Swiss-Prot
Match: DHDH_DANRE (Trans-1,2-dihydrobenzene-1,2-diol dehydrogenase OS=Danio rerio GN=dhdh PE=2 SV=2) HSP 1 Score: 96.7 bits (239), Expect = 5.900e-19 Identity = 73/257 (28.40%), Postives = 127/257 (49.42%), Query Frame = 1
BLAST of Spo06714.1 vs. ExPASy Swiss-Prot
Match: DHDH_PIG (Trans-1,2-dihydrobenzene-1,2-diol dehydrogenase OS=Sus scrofa GN=DHDH PE=1 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 2.500e-17 Identity = 68/259 (26.25%), Postives = 116/259 (44.79%), Query Frame = 1
BLAST of Spo06714.1 vs. TAIR (Arabidopsis)
Match: AT4G09670.1 (Oxidoreductase family protein) HSP 1 Score: 473.8 bits (1218), Expect = 1.000e-133 Identity = 220/351 (62.68%), Postives = 279/351 (79.49%), Query Frame = 1
BLAST of Spo06714.1 vs. TAIR (Arabidopsis)
Match: AT1G34200.1 (Glyceraldehyde-3-phosphate dehydrogenase-like family protein) HSP 1 Score: 378.3 bits (970), Expect = 5.700e-105 Identity = 189/352 (53.69%), Postives = 245/352 (69.60%), Query Frame = 1
BLAST of Spo06714.1 vs. TAIR (Arabidopsis)
Match: AT1G66130.1 (NAD(P)-binding Rossmann-fold superfamily protein) HSP 1 Score: 309.7 bits (792), Expect = 2.500e-84 Identity = 163/358 (45.53%), Postives = 224/358 (62.57%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo06714.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo06714.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo06714.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo06714.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 3
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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