Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AATTCTACTTTTAAAAAGGGGTAAAATTCTCCTCAACTGTTAGAACTCCACACTTACCAAAGCGAGAGAAGTCCCAGAAATACAATCCCCCTAAACCTCCCCAAATTCAATTGCTTAGGGTTTTTTCTCGCACCCCAAAATTCATCATCATCAATGGAGAACGACGAGGAAACGAGTTCAGCCCAGATGATGGACGAGATCTACGCCAACGGTGACGAGAAGCAACCTCACAGACGAATCATAAGCAGCGGAGAACAACTCGACGTTGAGGCTTACGCTTCACTCTACTCCGGTAGGACGAAGATTATGCGGCTGTTATTCATCGCCGAGAGATGCGATAGCAACCCTTCGATGCAATTGGAAGCCCTAAGGATGGCGTATGATGAAATCAAAAAGGGGGAGGATTCTCAGTTGTTTAAGGAAGCGGCGCAGAGGACTGATGGTAGATTAGGGCCTAATTATGGGTTCGATTCTTCGTGGATTGAGGCTGTTGAGAGGCGTGCTGAGCAGAGGAAAGAGAAACTTGATAATGAACTCAATGCTTATAGGGTATGATTTTTTATGTGTTTGTAAGTTGTTTTTAGTTTGTTAAATTTGTTGGAATTACGTAGTGTTGTTCTTATATCTTGTGAAGTTTTGATTTTTTAGTTGATGAGATGGGTTAGGTTAGGATTGTAGATTTGGAATGTCAATTTACAACTGTGTGATGGAAAATTTAATGGTTATTAGGGGTTTCATGAATGAAGTTGCGAAGATGAAGCAATCATAATCCGATTCCCCGGACCCCAAAAGAGAACATGGTAGTTGAGTTATGGTAGTATGCTTTTGGGGATGTACTCATGTACGAAATCATGCCTACATAGAAGGAATACATAATTGCTCATTCAAGACAAATGCTTCACAGATTTTGTTATCACAAAGCAAAGTGCTGATTCAGTTAGGGTTTTTGTGATTAAAAAAATTATGGTTATTAGGAAATTCATGAATGAAGTTGCTAAGATGAAGGGAAATTAAAGTCTGATTCTCTGCACCCTGAAGGACACTATTGTAGTTGAGTTATGGTGGTCTGCGTTTTCCGTTGGTTGGGATGAACGAAGTTTAGTGCCTACATAGAAAGAATCTATCATTGCTCACCAAGAAGAAATGCGGATGTTGTAATCAGGAGCAAAGCGCTGCCTGGTTAGGGATTTTATCATGTTGAACTTTGGTATTTATTTTGTCGATGACCACATGTGATAGACTCTCGGTTCATGCAACCAACCTCATCTATTTGGGAATAAGGCTATGTCGTTGTTGTTGTGGTTGGAAATTTGGTATATATGGTTCCTAGTTTGGTCGTATGCAATTTTATTGTCAAAGTTTTGTTAATGGTCTTTGTGACTTGGTGGCATGCATTTTGTTGCGAGGATGGAGCTTTGATGCTTTTCATTCCTTGAGTCGCCTACGCATTGTTGGTGAATTTATAGTTTTGCTTTTCCTTTTAGTTGTGTTACTACTTGGTTTTTGCTATATTCCAGTAGTAGTAGTTCTAAGTTTATTCAAGAAGCTTCTTACTGTAGTTCTTTGATAAGTATGGGCTTACTGATTCAGTTTGCAATTAATGTTGTTGGTTTGAGAACGATGGTGGTGCATAAATAGTTTGGATGAGGATATGATAAATTAGAGATTTTTTTGTCAGTGGAGATGTTGGATGAAAGGGAGATCAGGTGGGTTTTTTTGTCGTTGTTGTTTTAGAAGTTGTTTTGGGTAAAATATGGAATAGGGTAAGTGTGGGTCAAATTCTAATATGTACTAAAATCAATGTGGTTAGTTTCCTTTTCTAGTTCCATCTTGCCCTTTCTAGGGACGTGCCTTTGTGAATGGTGAGATCTCAACCAATCAATATTTGATATGGGAGTAAGATTTTATTCTGCACATGCTTAGCTCTGTTGTGGTTTGGGGACATTGGACATGTGTAGTAATTTTACTATGTTTTGACCTCTGTTATTTCCATTCGTATTTAATCAGTTTTGAGTCCATGTGTTTTGGTATACCTTTTCTGGGTAGTTTGTGGAATGTTGAGAATAGCCTGATTTTTTTGGATGGAATACCACAATATGCATCCGACTTCTAGTACCCTTTAATCTCTTCGTGTGACACTAATGTGATGTACAAATATATTTACCAGGTTCCCAACCTTCTATGGAAGGAATAGCATGTGTGGTTTCTTCTTTTGTGGAGGGAACAATCTATTATGTTAGGTTGATTTTCCATATGTGTTTTGTTCTATAAATATAATAGATGGATGTTATTGTGAGATAGATGGAAGACAGAAAATATTCTATTTGCTTAGCAAAACTGTATTCATAAAAGGAAATTGGGCTGTTAATATCGGGATTTGTGGTTGACACATGACTTAGTTGTATTTGGGATAAGTATACCAGCTAAGTCCTTGTGAAGCTTTTATACTTTGAGTTGGTTTATTCTGTAAGCCATCTAAGAAATGAAGCATAATGTACAGCAGGGTAATTTTATTTAAGGCAAGAGTGCTGTCTTCTACTCTTCTCTATGTTCCGATTCCTGATAAGTTGACTTTCATGTCTGAAAATTTTGGTATAATTGGAGGTCTAAGGCCTATTAAAAAAATTCTGGATGAAGCTTAAATGTGTGGTGTATCTGTTTTGGAAGTGGGTGTTACGGTCCATTGTAAGGTATGGGACTTAAGTCCCACATCGGTCATATGGGTGGCTGATGTGGGGTTTATATAGGATCATGGGCTCTCCTCCCCTTGAGCTAGCTTTTGGGGATGGTTCTCCTGTGGTCCTGTATCAATGGTATCAGAGCCGACCACCGCTCCTAGCACCACATGTGACCGATGGAGGTGACGCCGGTGCTCGTCCGGGGCTAGGAACCTTCTCTCTTTGCCTAGCGCAAAGCCTGCCACATGAGGGCATGTGGCTGCGAAGAGGGGTGGTATGTTACGGTCCATTGTAAGGTATGGGACTTAAGTCCCACATCGGTCATATGGGTGGCTGATGTGGGGTTTATATAGGATCATGGGCTCTCCTCCCCTTGAGCTAGCTTTTGGGGATGGTTCTCCTGTGGTCCTGTATCAGTGGGACGCTTGCCTTAACTGATTTGTTTTGATTGATACAATTAATGTTGTGTATAATACGATTGGTGATCCCGTGATAATTATCTAATCCACTAGTATGAGATTGGGTAAGGGTCGCAGTTGGCCATCTCTTTTGCTAAGTTTGTCAAAAATGCTCCACTTTCATGTTTTAATTCTCCTTTTTTGGTTTGTGTGTGTGTTGGGGGGTGCGGGGTTAGGTAACTCCCAGTTGACTTGCATTCTGATTTTTGTAAGTACAAAATTTTATTTTAGTTCTCCAGGTGCACCTGTTATACTGCATCTTCCTCAGTTCTTTTATTCTTATTTTCAATTACTGGCTAGTTGTTTTTGTATTTTCCTTTTAGGGCTACCTTTCTGATTTTCACAAGCTTATGCTAATTCTATCGCCTTTTGTTTGTGCAGACAAATTTGATTAAAGAAAGCATTAGGATGGGATACAATGATTTTGGAGATTTCTATTATGCTCATGGGCAGCTTGGAGATGCCTTCAAGAGTTACGTCCGTACTCGTGATTACTGCACCACTGCAAAGCATGTCGTTACTATGTGCTTAAATGCAATTCTAGTCAGTATTGAGATGGGTCAGTTTTCACATGTCACTAGCTATATAAGCAAAGCAGAGCAAACACCAGAGGGACTAGACCCTGTCATTATTGCAAAACTTCGTTGTGTAGCTGGATTGGCTCACTTAGAGACTAAGAAGTACAAACTTGCTGCCCGTAAGGTTTGTTTTCTCCTGTTCCTTTCTCAAACCCCTGCTTGTATGGTTGGTTTTAATAGTGCTGTTGTAGTGTGGTTTATTTATTTGTAAGCATAACTGTCACATGGAAAGATCTAACTAGAACTTTTTAGGTTTTGTATTTCTTGGCTATTGAGTTCAGACTTCTAGATAATTCTTTTCAATGTTGTGTTATTGTTAAATGACATGGTCAAGCTAGAAAGGTGCTACAAGGATTAGGGATGTATTTGCGATGTTCTCATGGATGGATGAGAAGTGCCTAATTTTGTTATCGTCTTCCTTGCTTGACTGCTATTTTAGATTTGTTAGATTTTTTTCATGCACACAAGTGGTAAAAATTTGTTAATTGCTAAGCAATTGCTCTATATTAATGCTTCTGATGTTTCTGCAGTTCTTAGAAGTTGGTCCCGAGCTGGCTAACCATTATTCTGAAGTGATTGCACCACAAGATGTTGCAACTTATGGTGGACTTTGTGCACTTGCTACGTTTGATCGGACAGAACTCAAGGCATGTACTGGACATCTGTCTTTCTGATAATTCATATTTTTTGTTCTACTGTTAAGAGTGTTTTTCTTTGATTCTGCAGAATAAAGTTATTGACAACCTCAACTACAGAAACTTTTTGGAGCTGGTGCCGGAGATAAGGGAGCTCATTAATGATTTCTATTCAAGGTAGTTGAAAAATTCTCAAACTAGCCCCTTTTCCTTTATAGCTGGGGAATGGTCTTTCTCCACATTTTAGCTATTGCTTCTTGAGGCCTTCTTTTACTTGTTATCTAAGTTGTTTAACCGGTGAGCATGGTGGTTCTATCTGTTTTGTGCATGATCGTGAAATGTGTGTTATTCCCACACACACATATGCAACACTGCCTTTGACCTGCCTGAGTGATCTGGCTTTTCTTTTTGTGGTATTTGGTCTTACTGTTGGCTCTTTGATCTGAGCTTAATGGCTTAAGACACTGAAACCCTCACTTTCTGTGACCTGGACTCTCTTTAGGGTTCTTATTTTCATCCCCTTCGCATAATTTGAGCTGGGTGCATACTGATATCTAGGAAAAGTGATCAGTTTGTGCTGGAGCCTTGTTTGCAGAGAAGGATTAGGTTCTGGCTTCTATAAACTGTACTTGTGTTTGGTGAAAAAGTTTATTCCTTATTTCTTAGTGTCTGATAGTATCTAGTCTTTTGATCGGCCTTCTGCTCTCTTACCCTTCTGTTGAGTTCTTTGTTCTCCCGTCCATTTGAAATACATGGTAATTAGGTAGCTTTGTAAAGTATTATTGCTTTTTGGTTACAGATTCGGTACCATGTCTAAAGAGATTCGATTCGGAACTATAATATGTAAAAGCATGTTGCTTGCTTAGTGATTAATACTGTTAATGGAGCATCATTTTACACATGAACCTTTTCCTTTCTTTATGGGCGGTAGTGGTATTTTGTTTTTATAAGTGGCATATTCTTCTTTTTTTCGTGGAAATTGGCTAACAAAAGATGGATATCATACTGGTTCCTCTGTTTTCATGGCTGAGCTTTTTTTTTTCCCCTTGCCTCCTTCCCAGTTCACACCTTTTTTTTTATAGTGTGCTTGAATGATGTTGATGACCTATCATGCATATTGTTGCAGCCGTTATGCATCTTGCCTCGACTATTTGGGAAATCTAAAAGCCAATCTGTTGCTTGACATCCATCTACATGACCATGTTGAGACTCTATACAAAGATATTCGTCACAAGGCACTCATTCAATATACGCTTCCTTTTGTGTCGGTTGATCTTAACATGATGGCAAATGCTTTCAAAACAAGTGTGTCAGGCTTACAGAAGGAGCTTGAGGCTTTGATTACAGACAACCAAATACAGGTATTCTTTCTCGCAGCTCATAAACTGGACCTTTCAAAATAGAACTTCATTTAATTACTTATGTGAATTGGTGTTGACCATTCTAATATTCTTTGCAGGCTAGGATTGACTCCCACAACAAAATCCTGTATGCACGTCATGCAGACCAGAGAAATGCCACTTTCCACCGCGTGCTACAGACAGGAACTACATTTGACCGGGATATCAAGTCGATGTTGCTCAGAGCAAATATAATCAAGCACGATTTTGGTCAGAGACAGCCAAGAAAGATATGATCTTTGAGTTTTTTCAACATTGATCGGCGCAAGTATGGATTACAGAAGCATTTTTTAACAATTCAAGAGTTGAGATGTTTCTGCTTTGCACAGTTCTTATGTTTCTCATTTTGTGCATACTTACACTTTCGATTTAGTAGCCGGAGTTTAGATATTTGCTCGCTCCCCACCCTTTTTTCATCCTTAGATCAGTTGGATGGTATTATTATGGAAATAGAAAAGCTGATTCAAGGATTTCATTTCCTCTTTGATCATGTGTACGGCAGAGACTTCACCCACTATGCAATGTTCTGCTTTTAACAGTCTGTCCATTTTGGTTATAAATGAGAAAAATTGTGATAAGTAGATAGTGCTCGATGGAAGTTGCCCACAATGTAGACCTGATCAACATGAGCCGGGCTCGAAATTTGGCAGGTTTGGGCAGAAACTTTTAGGCCCGAAAATTTTAAAGGGTTTGGGCAATGTAAAAAACTAAAAACTACACTTCTAGTTATAAATTTG AATTCTACTTTTAAAAAGGGGTAAAATTCTCCTCAACTGTTAGAACTCCACACTTACCAAAGCGAGAGAAGTCCCAGAAATACAATCCCCCTAAACCTCCCCAAATTCAATTGCTTAGGGTTTTTTCTCGCACCCCAAAATTCATCATCATCAATGGAGAACGACGAGGAAACGAGTTCAGCCCAGATGATGGACGAGATCTACGCCAACGGTGACGAGAAGCAACCTCACAGACGAATCATAAGCAGCGGAGAACAACTCGACGTTGAGGCTTACGCTTCACTCTACTCCGGTAGGACGAAGATTATGCGGCTGTTATTCATCGCCGAGAGATGCGATAGCAACCCTTCGATGCAATTGGAAGCCCTAAGGATGGCGTATGATGAAATCAAAAAGGGGGAGGATTCTCAGTTGTTTAAGGAAGCGGCGCAGAGGACTGATGGTAGATTAGGGCCTAATTATGGGTTCGATTCTTCGTGGATTGAGGCTGTTGAGAGGCGTGCTGAGCAGAGGAAAGAGAAACTTGATAATGAACTCAATGCTTATAGGACAAATTTGATTAAAGAAAGCATTAGGATGGGATACAATGATTTTGGAGATTTCTATTATGCTCATGGGCAGCTTGGAGATGCCTTCAAGAGTTACGTCCGTACTCGTGATTACTGCACCACTGCAAAGCATGTCGTTACTATGTGCTTAAATGCAATTCTAGTCAGTATTGAGATGGGTCAGTTTTCACATGTCACTAGCTATATAAGCAAAGCAGAGCAAACACCAGAGGGACTAGACCCTGTCATTATTGCAAAACTTCGTTGTGTAGCTGGATTGGCTCACTTAGAGACTAAGAAGTACAAACTTGCTGCCCGTAAGTTCTTAGAAGTTGGTCCCGAGCTGGCTAACCATTATTCTGAAGTGATTGCACCACAAGATGTTGCAACTTATGGTGGACTTTGTGCACTTGCTACGTTTGATCGGACAGAACTCAAGAATAAAGTTATTGACAACCTCAACTACAGAAACTTTTTGGAGCTGGTGCCGGAGATAAGGGAGCTCATTAATGATTTCTATTCAAGCCGTTATGCATCTTGCCTCGACTATTTGGGAAATCTAAAAGCCAATCTGTTGCTTGACATCCATCTACATGACCATGTTGAGACTCTATACAAAGATATTCGTCACAAGGCACTCATTCAATATACGCTTCCTTTTGTGTCGGTTGATCTTAACATGATGGCAAATGCTTTCAAAACAAGTGTGTCAGGCTTACAGAAGGAGCTTGAGGCTTTGATTACAGACAACCAAATACAGGCTAGGATTGACTCCCACAACAAAATCCTGTATGCACGTCATGCAGACCAGAGAAATGCCACTTTCCACCGCGTGCTACAGACAGGAACTACATTTGACCGGGATATCAAGTCGATGTTGCTCAGAGCAAATATAATCAAGCACGATTTTGGTCAGAGACAGCCAAGAAAGATATGATCTTTGAGTTTTTTCAACATTGATCGGCGCAAGTATGGATTACAGAAGCATTTTTTAACAATTCAAGAGTTGAGATGTTTCTGCTTTGCACAGTTCTTATGTTTCTCATTTTGTGCATACTTACACTTTCGATTTAGTAGCCGGAGTTTAGATATTTGCTCGCTCCCCACCCTTTTTTCATCCTTAGATCAGTTGGATGGTATTATTATGGAAATAGAAAAGCTGATTCAAGGATTTCATTTCCTCTTTGATCATGTGTACGGCAGAGACTTCACCCACTATGCAATGTTCTGCTTTTAACAGTCTGTCCATTTTGGTTATAAATGAGAAAAATTGTGATAAGTAGATAGTGCTCGATGGAAGTTGCCCACAATGTAGACCTGATCAACATGAGCCGGGCTCGAAATTTGGCAGGTTTGGGCAGAAACTTTTAGGCCCGAAAATTTTAAAGGGTTTGGGCAATGTAAAAAACTAAAAACTACACTTCTAGTTATAAATTTG ATGGAGAACGACGAGGAAACGAGTTCAGCCCAGATGATGGACGAGATCTACGCCAACGGTGACGAGAAGCAACCTCACAGACGAATCATAAGCAGCGGAGAACAACTCGACGTTGAGGCTTACGCTTCACTCTACTCCGGTAGGACGAAGATTATGCGGCTGTTATTCATCGCCGAGAGATGCGATAGCAACCCTTCGATGCAATTGGAAGCCCTAAGGATGGCGTATGATGAAATCAAAAAGGGGGAGGATTCTCAGTTGTTTAAGGAAGCGGCGCAGAGGACTGATGGTAGATTAGGGCCTAATTATGGGTTCGATTCTTCGTGGATTGAGGCTGTTGAGAGGCGTGCTGAGCAGAGGAAAGAGAAACTTGATAATGAACTCAATGCTTATAGGACAAATTTGATTAAAGAAAGCATTAGGATGGGATACAATGATTTTGGAGATTTCTATTATGCTCATGGGCAGCTTGGAGATGCCTTCAAGAGTTACGTCCGTACTCGTGATTACTGCACCACTGCAAAGCATGTCGTTACTATGTGCTTAAATGCAATTCTAGTCAGTATTGAGATGGGTCAGTTTTCACATGTCACTAGCTATATAAGCAAAGCAGAGCAAACACCAGAGGGACTAGACCCTGTCATTATTGCAAAACTTCGTTGTGTAGCTGGATTGGCTCACTTAGAGACTAAGAAGTACAAACTTGCTGCCCGTAAGTTCTTAGAAGTTGGTCCCGAGCTGGCTAACCATTATTCTGAAGTGATTGCACCACAAGATGTTGCAACTTATGGTGGACTTTGTGCACTTGCTACGTTTGATCGGACAGAACTCAAGAATAAAGTTATTGACAACCTCAACTACAGAAACTTTTTGGAGCTGGTGCCGGAGATAAGGGAGCTCATTAATGATTTCTATTCAAGCCGTTATGCATCTTGCCTCGACTATTTGGGAAATCTAAAAGCCAATCTGTTGCTTGACATCCATCTACATGACCATGTTGAGACTCTATACAAAGATATTCGTCACAAGGCACTCATTCAATATACGCTTCCTTTTGTGTCGGTTGATCTTAACATGATGGCAAATGCTTTCAAAACAAGTGTGTCAGGCTTACAGAAGGAGCTTGAGGCTTTGATTACAGACAACCAAATACAGGCTAGGATTGACTCCCACAACAAAATCCTGTATGCACGTCATGCAGACCAGAGAAATGCCACTTTCCACCGCGTGCTACAGACAGGAACTACATTTGACCGGGATATCAAGTCGATGTTGCTCAGAGCAAATATAATCAAGCACGATTTTGGTCAGAGACAGCCAAGAAAGATATGA MENDEETSSAQMMDEIYANGDEKQPHRRIISSGEQLDVEAYASLYSGRTKIMRLLFIAERCDSNPSMQLEALRMAYDEIKKGEDSQLFKEAAQRTDGRLGPNYGFDSSWIEAVERRAEQRKEKLDNELNAYRTNLIKESIRMGYNDFGDFYYAHGQLGDAFKSYVRTRDYCTTAKHVVTMCLNAILVSIEMGQFSHVTSYISKAEQTPEGLDPVIIAKLRCVAGLAHLETKKYKLAARKFLEVGPELANHYSEVIAPQDVATYGGLCALATFDRTELKNKVIDNLNYRNFLELVPEIRELINDFYSSRYASCLDYLGNLKANLLLDIHLHDHVETLYKDIRHKALIQYTLPFVSVDLNMMANAFKTSVSGLQKELEALITDNQIQARIDSHNKILYARHADQRNATFHRVLQTGTTFDRDIKSMLLRANIIKHDFGQRQPRKI Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo06672.1 vs. NCBI nr
Match: gi|902198014|gb|KNA13579.1| (hypothetical protein SOVF_115340 [Spinacia oleracea]) HSP 1 Score: 879.0 bits (2270), Expect = 3.400e-252 Identity = 443/443 (100.00%), Postives = 443/443 (100.00%), Query Frame = 1
BLAST of Spo06672.1 vs. NCBI nr
Match: gi|731361489|ref|XP_010692381.1| (PREDICTED: COP9 signalosome complex subunit 1 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 804.3 bits (2076), Expect = 1.100e-229 Identity = 404/443 (91.20%), Postives = 422/443 (95.26%), Query Frame = 1
BLAST of Spo06672.1 vs. NCBI nr
Match: gi|694447783|ref|XP_009349943.1| (PREDICTED: COP9 signalosome complex subunit 1-like [Pyrus x bretschneideri]) HSP 1 Score: 718.4 bits (1853), Expect = 7.800e-204 Identity = 357/445 (80.22%), Postives = 399/445 (89.66%), Query Frame = 1
BLAST of Spo06672.1 vs. NCBI nr
Match: gi|802696919|ref|XP_012083472.1| (PREDICTED: COP9 signalosome complex subunit 1 [Jatropha curcas]) HSP 1 Score: 716.1 bits (1847), Expect = 3.800e-203 Identity = 351/430 (81.63%), Postives = 391/430 (90.93%), Query Frame = 1
BLAST of Spo06672.1 vs. NCBI nr
Match: gi|657968406|ref|XP_008375905.1| (PREDICTED: COP9 signalosome complex subunit 1-like [Malus domestica]) HSP 1 Score: 715.7 bits (1846), Expect = 5.000e-203 Identity = 357/445 (80.22%), Postives = 396/445 (88.99%), Query Frame = 1
BLAST of Spo06672.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R3P4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_115340 PE=4 SV=1) HSP 1 Score: 879.0 bits (2270), Expect = 2.400e-252 Identity = 443/443 (100.00%), Postives = 443/443 (100.00%), Query Frame = 1
BLAST of Spo06672.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BJF9_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g020190 PE=4 SV=1) HSP 1 Score: 804.3 bits (2076), Expect = 7.500e-230 Identity = 404/443 (91.20%), Postives = 422/443 (95.26%), Query Frame = 1
BLAST of Spo06672.1 vs. UniProtKB/TrEMBL
Match: A0A067KA51_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14455 PE=4 SV=1) HSP 1 Score: 716.1 bits (1847), Expect = 2.700e-203 Identity = 351/430 (81.63%), Postives = 391/430 (90.93%), Query Frame = 1
BLAST of Spo06672.1 vs. UniProtKB/TrEMBL
Match: D7U7I9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0048g01980 PE=4 SV=1) HSP 1 Score: 714.9 bits (1844), Expect = 6.000e-203 Identity = 354/442 (80.09%), Postives = 396/442 (89.59%), Query Frame = 1
BLAST of Spo06672.1 vs. UniProtKB/TrEMBL
Match: B9RDL0_RICCO (Cop9 signalosome complex subunit, putative OS=Ricinus communis GN=RCOM_1613810 PE=4 SV=1) HSP 1 Score: 714.1 bits (1842), Expect = 1.000e-202 Identity = 348/430 (80.93%), Postives = 391/430 (90.93%), Query Frame = 1
BLAST of Spo06672.1 vs. ExPASy Swiss-Prot
Match: CSN1_ARATH (COP9 signalosome complex subunit 1 OS=Arabidopsis thaliana GN=CSN1 PE=1 SV=2) HSP 1 Score: 670.6 bits (1729), Expect = 1.200e-191 Identity = 328/443 (74.04%), Postives = 383/443 (86.46%), Query Frame = 1
BLAST of Spo06672.1 vs. ExPASy Swiss-Prot
Match: CSN1_DICDI (COP9 signalosome complex subunit 1 OS=Dictyostelium discoideum GN=csn1 PE=1 SV=1) HSP 1 Score: 398.3 bits (1022), Expect = 1.100e-109 Identity = 204/412 (49.51%), Postives = 286/412 (69.42%), Query Frame = 1
BLAST of Spo06672.1 vs. ExPASy Swiss-Prot
Match: CSN1_XENLA (COP9 signalosome complex subunit 1 OS=Xenopus laevis GN=csn1 PE=2 SV=1) HSP 1 Score: 366.3 bits (939), Expect = 4.700e-100 Identity = 205/443 (46.28%), Postives = 279/443 (62.98%), Query Frame = 1
BLAST of Spo06672.1 vs. ExPASy Swiss-Prot
Match: CSN1_MOUSE (COP9 signalosome complex subunit 1 OS=Mus musculus GN=Gps1 PE=1 SV=1) HSP 1 Score: 359.4 bits (921), Expect = 5.700e-98 Identity = 197/442 (44.57%), Postives = 277/442 (62.67%), Query Frame = 1
BLAST of Spo06672.1 vs. ExPASy Swiss-Prot
Match: CSN1_RAT (COP9 signalosome complex subunit 1 OS=Rattus norvegicus GN=Gps1 PE=1 SV=1) HSP 1 Score: 358.2 bits (918), Expect = 1.300e-97 Identity = 196/442 (44.34%), Postives = 277/442 (62.67%), Query Frame = 1
BLAST of Spo06672.1 vs. TAIR (Arabidopsis)
Match: AT3G61140.1 (26S proteasome, regulatory subunit Rpn7;Proteasome component (PCI) domain) HSP 1 Score: 670.6 bits (1729), Expect = 6.500e-193 Identity = 328/443 (74.04%), Postives = 383/443 (86.46%), Query Frame = 1
BLAST of Spo06672.1 vs. TAIR (Arabidopsis)
Match: AT4G24820.1 (26S proteasome, regulatory subunit Rpn7;Proteasome component (PCI) domain) HSP 1 Score: 88.2 bits (217), Expect = 1.400e-17 Identity = 69/310 (22.26%), Postives = 127/310 (40.97%), Query Frame = 1
BLAST of Spo06672.1 vs. TAIR (Arabidopsis)
Match: AT3G12850.1 (COP9 signalosome complex-related / CSN complex-related) HSP 1 Score: 69.7 bits (169), Expect = 5.100e-12 Identity = 64/233 (27.47%), Postives = 102/233 (43.78%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo06672.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo06672.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo06672.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo06672.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 3
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
|