Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTTTAGGGAAATTGACACATTGGGTCTCTCTCCTCTTTCTGGGCTTTGCTGTTACCCTTTTCTACATCTACCCATCTCCATCTTCTCAACAATCAGCTGAAGAATTGCCCAATTCCATTTATGATTTCACTGTTAAGGTAATTGTCAACTGTCAATCAGATTATTTGTTTTTAGGGTTCAGTTTTTTTTGCTCATTACTTGCTAATTACTTACTAGTTACAACTATGCATTACCCCTTTTATAGTTTATGATGAGTGTGTTAATTGTAGTGTTCAATTTCAAATTCCCATATTTTTAGGGGTTTCCGATTATATTTATGATTTATACACCATTTGTTAAGCTTGAACTTGTTCAGAATTGGGTTTTATATTTATGATTTGATTTGTACACCATTTGTTAAGCTTGAACTTGTTCAGAATTGGGTTTAATAAAAATGTGTTGTGTTTGATTGCAAAAAGGTACTTGTGATTTTCTAATTTGGGGTGATTTACCCCTTTTGGATCAAAGGAAGGGATATATATGATGTCAAGTTGCGTTGTAGTTGTCTAAATAGGTGTTAATGGTTTGATCGTATTTTGTCTTGTCATGTACAAAGTACTACGGAGTAATCTTGTGGCGTTGATTCTTTGATTTTCAAGCCTCAGTATGAGCCTATGAGGTGATACCGCAATAATGTAAAGTAGATATTGATGTTGTTCTTGGGATGATCCTTTTTTTAGTATGATATTGTGAAAACATACAACCTTTGAAATTGGCTGTTGATTCTAGGATTACCCTTCTTGAGTAGTATGAAATATCCTAAACAACCTTGTTTGGTTCAACTATTTCAACTAGTGTGTGAAATTGTGAATTAATAAGGCGGCTTATTGATGTCTGATTTGTTGTTCACTTCTTATGGATAAACAGGATATCCATGGTAAAGATGTAAGCCTCAGTACTTACAAGGAAAAGGTTCTTCTGATTGTCAATGTCGCTTCCCAATGGTAAATACAATTCTCAATTCCCTTTGTATTCTCTAGTGGCGTGCTGTTATGTGTTTCCTTGAATCCTTATATGCATCAATCTCATCAGTTTTCTAAGAACAGCCTTTTGATGTTTCTGTAGACACTATCATTTTCATTAAAGGTGGTGAAATATCTTTGCTGAATTTTAGTTTTATTGCATAGAAAAGCGGAAGAGTATTACCTATTCACAAGAACTACCCAGTAGAGTTCATCTGGATGGATTTGGAATAGGCTAAAGCTAAACCGTGTGAACCCACATCACTTTAGTTAAGGGCTTAAGGCCTGGTAATTGAACCATAACGTGCAGAAAAAATACCCTCTCTCCAAGTCTTGCCTGATACACCATATATTTCTCATAATCTAGTTTTACCATGTATCTTTTCTCGCGTTGAAATTTTTTAGAACGACCTATACAGACTTGCTTGCCATCGATCATCTGGATGCATTTTGCAACCCACAAATGCAAGTAATCTGAATATTTTTACTTTCTCCTAGAAGTTTGCGAGAGGTCATTGAATTTAACTTAACTGCTGTCAGATTTTATTAGAGTAACAACAACAACAACAAAGCCTTAGTCCCAAAATGATTTGGGGTCAGATTTTATTAGAATGCTCTTGAAATTTATTTGATTAGGTTAATTCCTGTTGATCCTCACAGAGTCACGGGTCAGTCCAACATGATTTTTTTTATTAGAGTGCTCGCTATGATGTGGTCCCATGTGGATACATAAATCTGTTTTTCCCCTCAAAGGTTTTTCCCTTTGGATTTTTCTCATTTGAGGATTTCGTTTTCTTAAAAGTGCAGTGGTTTAACAAAGTCGAACTACAAGGAATTGAACATTTTGTATAAGAACTACAAGGACCAAGGTTTGTTCTTTCTCCAACAGTACACTTTTGTAAAGTTTTTCTTACAGTATCTAATTGTCTTAGATGTATGTTGGTGTGTATGTCATCTATGTGATAGGCTTTGAAATATTAGCCTTCCCATGTAACCAGTTTGGATGGCAAGAACCAGGAAGTAATGAAGAAATCAATGAAGCAGTCTGTTCTTCTTTTAAAGCAGAATTCCCTTTATTTCAGAAGGTAATACATCTCTCAAAGCATGAAACGAGACCCAGCTGGTGAATAACGTACCGCTAAATGAAACACAATCATATTATATGTGCTTTTTATTTGTTCAATCAATTAGATCTTACACTTTTTCTTCTTTTACTGAGGGTTGGCTTAACTAAGTATCTGTTATCTGGTATTTGCTTAATTTCTGTTTCTCTGTCCTTTTTTAAAATAATTTTCTTATATGTGTGTGTGTGTGGGAGTTTAGGTGTGTGTGTTTCCGTTCCTGTATTTCGACCAGGTTTCCTGTCAAACGATTATATATTTACCTTCTTTTCTTGAAATAACTTAAAATTACTTTTAAGGGTTTTTGTTTGACTTTTTGTACGAGTAATGAATGGAACGGAACCATTGATATCATTTTTTACAAGAATTTCCCTCTAGTGAAAATATTGGAATTTAATAATCTTCAGAAAATATTTTGCGTAGGAGGTTTCCAGATTAAAAGATGATACCACTGGTAGAATAATCTGACATTTCTCATCTTTGTTTCCTGTTTATCTGCATCTGCAATTATTGAAAGTTGAAAGTTGAAAGAGAGACTTGTCTTTCAATTTGATAATAGGTCTTAACTCTAAGATCTTGACACAAGATTACTAGAGAATGGCATTTGCTCTAAATGTGTATCAATACCTGCTGAGACTTCACACTGTAGCTCAAGTAAAATAGACACCGATTGAAAACCATCTGAGGACCTACAGACTAGCAAATGAAACTCGTTTATTCATAAATAGCTTCATCATCATTTTTAATGCAAGCTTGTATTGCTACCATAAGAATGTATCTTTCCTGGAAAGTTTTTGCCTCGCCTTCTAGTGGAAAATTAACTTTATTAATACCCTACTCTTACTGAACTGGAAAACATATGTAAAATAAAGTTGTAGGAAAAGAAAAACACAAGCTGTTTATCTCCAAGCCATAGATGAGCTCATGAGCCCTTGATGCAGATTTTGTCCTTTGGTCAATCTCTTTTGTTCTTATAGAGTAGAAATTCATTGTTTAGTTTCCCATCCTTGCTTGACCCTGAAGTTTCTTCTAATTTGTGATTGTTGTGAATCTCAACAATTCCATGGAGTATATACAACTTACAAGCTGGTTATGTAAACTCCGCAGATAGATGTCAACGGGAAGAATGCAGCACCACTTTACAAGTTTTTAAAATCAAAGAAATCCGGCGTAATATTAGATGAGATCAAATGGAACTTTGCGAAATTTTTGGTGGACAGACAAGGAAATGTTGTTGAGAGATATGCTCCTGTGACCTCCCCCCTGAAAATTGAGGTTTGATTCAGTACTTTCTTCTGTTTTCCTGTCAAAAGTTTCTTGTTTTTCCCCCCTTCTCTGAATTCTGTTTCCTCCCTCCAATTATTTGTTGCAGAGTGAGATTCAAAACCTCCTGGAATCATCTTAGATCCGAGACTCGCAAATTGTGAAGAGAAAACATGCAGGACTTGATTTTTGAAGTCTGTTATTGTAATTCTGGTTGATTTTGGAAATTGTGGATGTGTGATGATGAAAATTGACTCGCCTTACGATTATTGTATGATGGAAATGATGTTGTAGTTGGAAAAGGGTTAAGGGGTGAAGGAATTGAACATCAATATCAGCAAAGAAACACTGATGTTTTAGTGTAGGCTTCAACAAGGTAGAGGGAAAGTTTATAGTGGGATTAGGAGCATTGTTCAACCTCGATGAATTAAGCAGCTTTCAGTTCCCTGCAATAATTCTACCGTACCTCTGTTAAGGCCATTAGCTCATAACAACCTTATGTTGTTGGAAGTAACATTCTGTCTGGCTCTGCTGCATGCATACCCTTAAGAGGGTGTTTGGTTTGCGGATTTTTGGTTGTGAGGTATGGGTTTGGACTTTGGAATGGGCAAAACCTATGCCTTTTATTTGGTTTATAAAATTTCATTCTCCGATATAACCAAACACATGCTATTAGGAATCAAGTTCCAAGACTTCCAACCCCAAACCATCATAGTTTCATTTCTGATTCCAAACCACACCACTATGGGAATCAAATACCCCCTAAAAGATAACAATGCCGTCTTAGCTTAATGATTAAAAGTTTAAAACCAAGGGCTCATATGTACAATATATTATATATGCCTGAATTCCCCTATCCATTTGTAATTTGTAGATATCCGTACCTAAAAACATATTACGTTTAGAGATCAAAAAATGTACTACGTATAAATTAATTGGAATTACC ATGGGTTTAGGGAAATTGACACATTGGGTCTCTCTCCTCTTTCTGGGCTTTGCTGTTACCCTTTTCTACATCTACCCATCTCCATCTTCTCAACAATCAGCTGAAGAATTGCCCAATTCCATTTATGATTTCACTGTTAAGGATATCCATGGTAAAGATGTAAGCCTCAGTACTTACAAGGAAAAGGTTCTTCTGATTGTCAATGTCGCTTCCCAATGTGGTTTAACAAAGTCGAACTACAAGGAATTGAACATTTTGTATAAGAACTACAAGGACCAAGGCTTTGAAATATTAGCCTTCCCATGTAACCAGTTTGGATGGCAAGAACCAGGAAGTAATGAAGAAATCAATGAAGCAGTCTGTTCTTCTTTTAAAGCAGAATTCCCTTTATTTCAGAAGATAGATGTCAACGGGAAGAATGCAGCACCACTTTACAAGTTTTTAAAATCAAAGAAATCCGGCGTAATATTAGATGAGATCAAATGGAACTTTGCGAAATTTTTGGTGGACAGACAAGGAAATGTTGTTGAGAGATATGCTCCTGTGACCTCCCCCCTGAAAATTGAGAGTGAGATTCAAAACCTCCTGGAATCATCTTAGATCCGAGACTCGCAAATTGTGAAGAGAAAACATGCAGGACTTGATTTTTGAAGTCTGTTATTGTAATTCTGGTTGATTTTGGAAATTGTGGATGTGTGATGATGAAAATTGACTCGCCTTACGATTATTGTATGATGGAAATGATGTTGTAGTTGGAAAAGGGTTAAGGGGTGAAGGAATTGAACATCAATATCAGCAAAGAAACACTGATGTTTTAGTGTAGGCTTCAACAAGGTAGAGGGAAAGTTTATAGTGGGATTAGGAGCATTGTTCAACCTCGATGAATTAAGCAGCTTTCAGTTCCCTGCAATAATTCTACCGTACCTCTGTTAAGGCCATTAGCTCATAACAACCTTATGTTGTTGGAAGTAACATTCTGTCTGGCTCTGCTGCATGCATACCCTTAAGAGGGTGTTTGGTTTGCGGATTTTTGGTTGTGAGGTATGGGTTTGGACTTTGGAATGGGCAAAACCTATGCCTTTTATTTGGTTTATAAAATTTCATTCTCCGATATAACCAAACACATGCTATTAGGAATCAAGTTCCAAGACTTCCAACCCCAAACCATCATAGTTTCATTTCTGATTCCAAACCACACCACTATGGGAATCAAATACCCCCTAAAAGATAACAATGCCGTCTTAGCTTAATGATTAAAAGTTTAAAACCAAGGGCTCATATGTACAATATATTATATATGCCTGAATTCCCCTATCCATTTGTAATTTGTAGATATCCGTACCTAAAAACATATTACGTTTAGAGATCAAAAAATGTACTACGTATAAATTAATTGGAATTACC ATGGGTTTAGGGAAATTGACACATTGGGTCTCTCTCCTCTTTCTGGGCTTTGCTGTTACCCTTTTCTACATCTACCCATCTCCATCTTCTCAACAATCAGCTGAAGAATTGCCCAATTCCATTTATGATTTCACTGTTAAGGATATCCATGGTAAAGATGTAAGCCTCAGTACTTACAAGGAAAAGGTTCTTCTGATTGTCAATGTCGCTTCCCAATGTGGTTTAACAAAGTCGAACTACAAGGAATTGAACATTTTGTATAAGAACTACAAGGACCAAGGCTTTGAAATATTAGCCTTCCCATGTAACCAGTTTGGATGGCAAGAACCAGGAAGTAATGAAGAAATCAATGAAGCAGTCTGTTCTTCTTTTAAAGCAGAATTCCCTTTATTTCAGAAGATAGATGTCAACGGGAAGAATGCAGCACCACTTTACAAGTTTTTAAAATCAAAGAAATCCGGCGTAATATTAGATGAGATCAAATGGAACTTTGCGAAATTTTTGGTGGACAGACAAGGAAATGTTGTTGAGAGATATGCTCCTGTGACCTCCCCCCTGAAAATTGAGAGTGAGATTCAAAACCTCCTGGAATCATCTTAG MGLGKLTHWVSLLFLGFAVTLFYIYPSPSSQQSAEELPNSIYDFTVKDIHGKDVSLSTYKEKVLLIVNVASQCGLTKSNYKELNILYKNYKDQGFEILAFPCNQFGWQEPGSNEEINEAVCSSFKAEFPLFQKIDVNGKNAAPLYKFLKSKKSGVILDEIKWNFAKFLVDRQGNVVERYAPVTSPLKIESEIQNLLESS Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo06637.1 vs. NCBI nr
Match: gi|902177672|gb|KNA08986.1| (hypothetical protein SOVF_157760 [Spinacia oleracea]) HSP 1 Score: 403.3 bits (1035), Expect = 2.500e-109 Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 1
BLAST of Spo06637.1 vs. NCBI nr
Match: gi|731322298|ref|XP_010671813.1| (PREDICTED: probable glutathione peroxidase 2 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 335.5 bits (859), Expect = 6.400e-89 Identity = 163/199 (81.91%), Postives = 182/199 (91.46%), Query Frame = 1
BLAST of Spo06637.1 vs. NCBI nr
Match: gi|584482597|gb|AHJ09680.1| (glutathione peroxidase [Tamarix hispida]) HSP 1 Score: 290.0 bits (741), Expect = 3.100e-75 Identity = 143/195 (73.33%), Postives = 161/195 (82.56%), Query Frame = 1
BLAST of Spo06637.1 vs. NCBI nr
Match: gi|1009157660|ref|XP_015896875.1| (PREDICTED: probable phospholipid hydroperoxide glutathione peroxidase [Ziziphus jujuba]) HSP 1 Score: 288.9 bits (738), Expect = 6.800e-75 Identity = 140/200 (70.00%), Postives = 164/200 (82.00%), Query Frame = 1
BLAST of Spo06637.1 vs. NCBI nr
Match: gi|1000945638|ref|XP_002529755.2| (PREDICTED: probable glutathione peroxidase 2 isoform X1 [Ricinus communis]) HSP 1 Score: 286.6 bits (732), Expect = 3.400e-74 Identity = 142/198 (71.72%), Postives = 160/198 (80.81%), Query Frame = 1
BLAST of Spo06637.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QR23_SPIOL (Glutathione peroxidase OS=Spinacia oleracea GN=SOVF_157760 PE=3 SV=1) HSP 1 Score: 403.3 bits (1035), Expect = 1.700e-109 Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 1
BLAST of Spo06637.1 vs. UniProtKB/TrEMBL
Match: A0A166U850_HEVBR (Glutathione peroxidase OS=Hevea brasiliensis GN=GPX PE=2 SV=1) HSP 1 Score: 290.0 bits (741), Expect = 2.100e-75 Identity = 142/197 (72.08%), Postives = 162/197 (82.23%), Query Frame = 1
BLAST of Spo06637.1 vs. UniProtKB/TrEMBL
Match: W6EJE6_9CARY (Glutathione peroxidase OS=Tamarix hispida GN=GPX PE=2 SV=1) HSP 1 Score: 290.0 bits (741), Expect = 2.100e-75 Identity = 143/195 (73.33%), Postives = 161/195 (82.56%), Query Frame = 1
BLAST of Spo06637.1 vs. UniProtKB/TrEMBL
Match: A0A061EPN7_THECC (Glutathione peroxidase OS=Theobroma cacao GN=TCM_021557 PE=3 SV=1) HSP 1 Score: 280.8 bits (717), Expect = 1.300e-72 Identity = 138/196 (70.41%), Postives = 157/196 (80.10%), Query Frame = 1
BLAST of Spo06637.1 vs. UniProtKB/TrEMBL
Match: M5XGS1_PRUPE (Glutathione peroxidase OS=Prunus persica GN=PRUPE_ppa011682mg PE=3 SV=1) HSP 1 Score: 279.6 bits (714), Expect = 2.900e-72 Identity = 141/200 (70.50%), Postives = 160/200 (80.00%), Query Frame = 1
BLAST of Spo06637.1 vs. ExPASy Swiss-Prot
Match: GPX3_ARATH (Probable glutathione peroxidase 3, mitochondrial OS=Arabidopsis thaliana GN=GPX3 PE=1 SV=1) HSP 1 Score: 260.0 bits (663), Expect = 2.100e-68 Identity = 129/188 (68.62%), Postives = 148/188 (78.72%), Query Frame = 1
BLAST of Spo06637.1 vs. ExPASy Swiss-Prot
Match: GPX4_CITSI (Probable phospholipid hydroperoxide glutathione peroxidase OS=Citrus sinensis GN=CSA PE=1 SV=1) HSP 1 Score: 240.0 bits (611), Expect = 2.300e-62 Identity = 114/166 (68.67%), Postives = 133/166 (80.12%), Query Frame = 1
BLAST of Spo06637.1 vs. ExPASy Swiss-Prot
Match: GPX2_ARATH (Probable glutathione peroxidase 2 OS=Arabidopsis thaliana GN=GPX2 PE=1 SV=1) HSP 1 Score: 240.0 bits (611), Expect = 2.300e-62 Identity = 110/163 (67.48%), Postives = 133/163 (81.60%), Query Frame = 1
BLAST of Spo06637.1 vs. ExPASy Swiss-Prot
Match: GPX4_NICSY (Probable phospholipid hydroperoxide glutathione peroxidase OS=Nicotiana sylvestris PE=2 SV=1) HSP 1 Score: 237.7 bits (605), Expect = 1.100e-61 Identity = 112/164 (68.29%), Postives = 128/164 (78.05%), Query Frame = 1
BLAST of Spo06637.1 vs. ExPASy Swiss-Prot
Match: GPX4_TOBAC (Probable phospholipid hydroperoxide glutathione peroxidase OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 236.9 bits (603), Expect = 1.900e-61 Identity = 111/164 (67.68%), Postives = 128/164 (78.05%), Query Frame = 1
BLAST of Spo06637.1 vs. TAIR (Arabidopsis)
Match: AT2G43350.1 (glutathione peroxidase 3) HSP 1 Score: 260.0 bits (663), Expect = 1.200e-69 Identity = 129/188 (68.62%), Postives = 148/188 (78.72%), Query Frame = 1
BLAST of Spo06637.1 vs. TAIR (Arabidopsis)
Match: AT2G31570.1 (glutathione peroxidase 2) HSP 1 Score: 240.0 bits (611), Expect = 1.300e-63 Identity = 110/163 (67.48%), Postives = 133/163 (81.60%), Query Frame = 1
BLAST of Spo06637.1 vs. TAIR (Arabidopsis)
Match: AT4G11600.1 (glutathione peroxidase 6) HSP 1 Score: 235.0 bits (598), Expect = 4.100e-62 Identity = 112/164 (68.29%), Postives = 129/164 (78.66%), Query Frame = 1
BLAST of Spo06637.1 vs. TAIR (Arabidopsis)
Match: AT2G25080.1 (glutathione peroxidase 1) HSP 1 Score: 226.5 bits (576), Expect = 1.500e-59 Identity = 106/175 (60.57%), Postives = 132/175 (75.43%), Query Frame = 1
BLAST of Spo06637.1 vs. TAIR (Arabidopsis)
Match: AT4G31870.1 (glutathione peroxidase 7) HSP 1 Score: 226.5 bits (576), Expect = 1.500e-59 Identity = 107/157 (68.15%), Postives = 125/157 (79.62%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo06637.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo06637.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo06637.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo06637.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
|