Spo06615 (gene) | SpinachBase

Overview


Name	Spo06615
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	nuclear fusion defective 6
Location	Super_scaffold_101 : 1028378 .. 1030678 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCGCAACACACTCTCGAAGTCTCGAGTAGTCCATTGTATGAATTAAGAGTTGATGTTGGGTTTGGTTGGAATTTGGTAAACCTACGATTTTGAAGCACAACACCACAAACACACTTCACAAAAGCCCACAAAACAAGCTTTGTTACTCGATAAGTCGATAACTCAAAGAGAGAAAACACCAAGCAAATGTTGAAAACGAACCAAAAACCCCAATAGAACCCTCAATCCTCTCTACCACCGATGGCAACCTTCGGTGCGGCAAGGTCATTCCTCCGCTCCACAACCACCGCTAGATCCGCCGTCCCACGATTCGCAGCCGCTTCCAAACCAAAATCCAACACATTTTCTCCCTCCTTCAACCTTCCGAAGCAAAAGAATCTTTCTGCCCCTCGCATTTTCAGGTTACAAAACCTGCATTTGATTCCCTTAATTTATTTAGTCTTGAAATACCCAGAAAATTAGTTAATTTAACTGCATTAGTTCAATTGATTCTATGTTTTGTAATCTGGGGTTGTTTGTAATTAGGTCTCCCGTTGAATTGAGCTGCTGTGTTGAATCGTTGCTGCCGTATCACACGGCCACCGCCTCTGCGTTGCTTACGTCCATGCTCTCCGTCGCGTGCCGTTCCGGTTGGACTCCTGAAGGTATTCTTTCTCTCTCCACCTGCTCATTTTACTCTTTATTTTGAATTTCTGTGCAATTTTATGACAATGTTTTGATGAACTATGCTGATTTTAAGTTTAGAAGGACAGTGATGTACGACGTATGAAGATTAAGCTTTAAATTAACCTAAACAAGTACTCCTTTAGCCCACATTTACAGAACCATTTATTGAGTTCAACATTGCAATCTTTGCTTTATTCATGTATGTGATAATTTATGAATTATTGGGGTATTTATTCTTTTATGAACTATCGGGTTAATGCCCGACTGCCCGAGTGATGGAACTAACAAATTATGCTGAGGAGTAAACAATTTACAATCCCTAATCTTCAGGTTCCTTATACTGGAATACTTAGGCGTGTGGAGATGTTTCTGAATTATATTTGAGACCAAAATGTAGGATGAATTGCAGCATTTGAAGACTGGCATTATGATTTTTTGCAAAGGCTAATGATGGATAGTGCTTTTGCTTCTTTGACATGTAGTTAGGGTCTGGAGATAGTACGATTATAGAGTAATTAGATTGTGTTAAGTGATTGGATCACTGAGTTCTTGTCATAACCATGGAATTATTAGCTCTCTGTGTTGTTTTGTATTATATGTTCGCTATACTTGTGTTCTTGAATTAGTGTTTCAGAGGAATATGGGCTTTGCGTTGTGATGCTTGAGCTTAAGTTCCCTCATATAACTGCCAGTTAGTTATGATAGTCACCCATGTTTTCACTTATGATGATAGAACTTATTTTGTCGTAAACAACTTTGGCGTTACTCTCAACAGATTAACTAGGTCTTGTTTGATTCAATATATATGATCATACTTTAGTTTTTTTATAGCTTTTACTTATGTAGGTCACCTTCGTTCTACCATCTTTCTCTAAAGGAACCATACCCTCTTTCCTCTTGTAGGGAAAGACAAGACTAGATGAAGGGCAAGCTAGCACTGATGGAGAGACTCGGATTTTTGGGTTGAATTTTGTGAGTTTGGTCCTTCTAAATTAGTGGAGTGAGATAATTTGTTATAGACTGAGAAGATGAATCACTAAAGTATACGAATTGATCTCAAATGGCAATTATCAAATTTTCCTTGTTTAAAACTGTGTCATGTAAAGATGTAGGTCAGGTCTTAATGATGTGGGTGTTCTTTAATAATTCAGTTACCTTTCTGTTCACAATGATTATATCTGATTCCTTCAAATAGGTGTTTCGAACCTTAAATATAAAAAATAGATCATTATATCGCTTGCATGAAATGTGGTTTATCTTCTAGCTAACTACATTCATGTGTATGGTACATTGAAACTAATGGATAAGTGAGATTTTGAGGTTTGCAATCGGGATCTCCGCTCACATCATCTTACATGAACAACACTACATTCATTAACAACTTACAAGGAGATAAAATAAATTTTACTTTCCTGTAGGTAGTTTTAGCATGTCAATACTCCAATGCTGGCTCCAAACATATGTCAACTTGAACTTGTTGATTGTTAATCTTTATTGCAATATGATATAAGAGTCACACTAATACGTCATATGCATTCAGATTGCAATGATGATGTATGATGCATATCAGACGGTCGTGCAAAGTATAATGAACTTGGGATTTGTGCATTGGTGATATGCTAAGGGTTTTCAAAG

mRNA sequence

GCGCAACACACTCTCGAAGTCTCGAGTAGTCCATTGTATGAATTAAGAGTTGATGTTGGGTTTGGTTGGAATTTGGTAAACCTACGATTTTGAAGCACAACACCACAAACACACTTCACAAAAGCCCACAAAACAAGCTTTGTTACTCGATAAGTCGATAACTCAAAGAGAGAAAACACCAAGCAAATGTTGAAAACGAACCAAAAACCCCAATAGAACCCTCAATCCTCTCTACCACCGATGGCAACCTTCGGTGCGGCAAGGTCATTCCTCCGCTCCACAACCACCGCTAGATCCGCCGTCCCACGATTCGCAGCCGCTTCCAAACCAAAATCCAACACATTTTCTCCCTCCTTCAACCTTCCGAAGCAAAAGAATCTTTCTGCCCCTCGCATTTTCAGGTCTCCCGTTGAATTGAGCTGCTGTGTTGAATCGTTGCTGCCGTATCACACGGCCACCGCCTCTGCGTTGCTTACGTCCATGCTCTCCGTCGCGTGCCGTTCCGGTTGGACTCCTGAAGGGAAAGACAAGACTAGATGAAGGGCAAGCTAGCACTGATGGAGAGACTCGGATTTTTGGGTTGAATTTTATTGCAATGATGATGTATGATGCATATCAGACGGTCGTGCAAAGTATAATGAACTTGGGATTTGTGCATTGGTGATATGCTAAGGGTTTTCAAAG

Coding sequence (CDS)

ATGGCAACCTTCGGTGCGGCAAGGTCATTCCTCCGCTCCACAACCACCGCTAGATCCGCCGTCCCACGATTCGCAGCCGCTTCCAAACCAAAATCCAACACATTTTCTCCCTCCTTCAACCTTCCGAAGCAAAAGAATCTTTCTGCCCCTCGCATTTTCAGGTCTCCCGTTGAATTGAGCTGCTGTGTTGAATCGTTGCTGCCGTATCACACGGCCACCGCCTCTGCGTTGCTTACGTCCATGCTCTCCGTCGCGTGCCGTTCCGGTTGGACTCCTGAAGGGAAAGACAAGACTAGATGA

Protein sequence

MATFGAARSFLRSTTTARSAVPRFAAASKPKSNTFSPSFNLPKQKNLSAPRIFRSPVELSCCVESLLPYHTATASALLTSMLSVACRSGWTPEGKDKTR

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo06615.1	Spo06615.1	mRNA

Homology

[Close]

BLAST of Spo06615.1 vs. NCBI nr
Match: gi|902238209|gb|KNA25081.1| (hypothetical protein SOVF_009800 isoform C [Spinacia oleracea])

HSP 1 Score: 191.0 bits (484), Expect = 9.600e-46
Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 1


		  
Query: 1   MATFGAARSFLRSTTTARSAVPRFAAASKPKSNTFSPSFNLPKQKNLSAPRIFRSPVELS 60
           MATFGAARSFLRSTTTARSAVPRFAAASKPKSNTFSPSFNLPKQKNLSAPRIFRSPVELS
Sbjct: 1   MATFGAARSFLRSTTTARSAVPRFAAASKPKSNTFSPSFNLPKQKNLSAPRIFRSPVELS 60

Query: 61  CCVESLLPYHTATASALLTSMLSVACRSGWTPEGKDKTR 100
           CCVESLLPYHTATASALLTSMLSVACRSGWTPEGKDKTR
Sbjct: 61  CCVESLLPYHTATASALLTSMLSVACRSGWTPEGKDKTR 99

[Close]

BLAST of Spo06615.1 vs. NCBI nr
Match: gi|902238208|gb|KNA25080.1| (hypothetical protein SOVF_009800 isoform B [Spinacia oleracea])

HSP 1 Score: 178.7 bits (452), Expect = 4.900e-42
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 1


		  
Query: 1  MATFGAARSFLRSTTTARSAVPRFAAASKPKSNTFSPSFNLPKQKNLSAPRIFRSPVELS 60
          MATFGAARSFLRSTTTARSAVPRFAAASKPKSNTFSPSFNLPKQKNLSAPRIFRSPVELS
Sbjct: 1  MATFGAARSFLRSTTTARSAVPRFAAASKPKSNTFSPSFNLPKQKNLSAPRIFRSPVELS 60

Query: 61 CCVESLLPYHTATASALLTSMLSVACRSGWTPE 94
          CCVESLLPYHTATASALLTSMLSVACRSGWTPE
Sbjct: 61 CCVESLLPYHTATASALLTSMLSVACRSGWTPE 93

[Close]

BLAST of Spo06615.1 vs. NCBI nr
Match: gi|902238207|gb|KNA25079.1| (hypothetical protein SOVF_009800 isoform A [Spinacia oleracea])

HSP 1 Score: 178.7 bits (452), Expect = 4.900e-42
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 1


		  
Query: 1  MATFGAARSFLRSTTTARSAVPRFAAASKPKSNTFSPSFNLPKQKNLSAPRIFRSPVELS 60
          MATFGAARSFLRSTTTARSAVPRFAAASKPKSNTFSPSFNLPKQKNLSAPRIFRSPVELS
Sbjct: 1  MATFGAARSFLRSTTTARSAVPRFAAASKPKSNTFSPSFNLPKQKNLSAPRIFRSPVELS 60

Query: 61 CCVESLLPYHTATASALLTSMLSVACRSGWTPE 94
          CCVESLLPYHTATASALLTSMLSVACRSGWTPE
Sbjct: 61 CCVESLLPYHTATASALLTSMLSVACRSGWTPE 93

[Close]

BLAST of Spo06615.1 vs. NCBI nr
Match: gi|902222410|gb|KNA19164.1| (hypothetical protein SOVF_064130 isoform A [Spinacia oleracea])

HSP 1 Score: 152.1 bits (383), Expect = 5.000e-34
Identity = 83/95 (87.37%), Postives = 88/95 (92.63%), Query Frame = 1


		  
Query: 1  MATFGAARSFLRSTTTARSAVPRFAAASKPKSNTFSPS-FNLPKQKNLSAPRIFRSPVEL 60
          MA+F AARSFLRS+TTARSAVPRF+AASKPKSN FSPS FN+PKQ  LSAPRIFRSPVEL
Sbjct: 1  MASFAAARSFLRSSTTARSAVPRFSAASKPKSNPFSPSSFNIPKQNTLSAPRIFRSPVEL 60

Query: 61 SCCVESLLPYHTATASALLTSMLSVA-CRSGWTPE 94
          SCCVESL+PYHTATASALLTSMLSVA CRSGW PE
Sbjct: 61 SCCVESLMPYHTATASALLTSMLSVAPCRSGWFPE 95

[Close]

BLAST of Spo06615.1 vs. NCBI nr
Match: gi|731350250|ref|XP_010686408.1| (PREDICTED: uncharacterized protein LOC104900632 isoform X2 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 140.6 bits (353), Expect = 1.500e-30
Identity = 79/101 (78.22%), Postives = 87/101 (86.14%), Query Frame = 1


		  
Query: 1   MATFGAARSFLRSTTTARSAVPRFAAASKPKSN-TFSPSFNLPKQKNLSAPRIFRSPVEL 60
           MATF AARS LRS+ TARSA PRF+AA K KSN +F+ +F+LPKQ  LSAPRIFRSPVEL
Sbjct: 1   MATFAAARSILRSSATARSAAPRFSAAPKTKSNPSFNSTFHLPKQNPLSAPRIFRSPVEL 60

Query: 61  SCCVESLLPYHTATASALLTSMLSVACRS-GWTPEGKDKTR 100
           SCCVESL+PYHTATASALLTSMLS A R  GWTPEGKD+TR
Sbjct: 61  SCCVESLMPYHTATASALLTSMLSGAPRRFGWTPEGKDQTR 101

[Close]

BLAST of Spo06615.1 vs. UniProtKB/TrEMBL
Match: A0A0K9S005_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_009800 PE=4 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 6.700e-46
Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 1


		  
Query: 1   MATFGAARSFLRSTTTARSAVPRFAAASKPKSNTFSPSFNLPKQKNLSAPRIFRSPVELS 60
           MATFGAARSFLRSTTTARSAVPRFAAASKPKSNTFSPSFNLPKQKNLSAPRIFRSPVELS
Sbjct: 1   MATFGAARSFLRSTTTARSAVPRFAAASKPKSNTFSPSFNLPKQKNLSAPRIFRSPVELS 60

Query: 61  CCVESLLPYHTATASALLTSMLSVACRSGWTPEGKDKTR 100
           CCVESLLPYHTATASALLTSMLSVACRSGWTPEGKDKTR
Sbjct: 61  CCVESLLPYHTATASALLTSMLSVACRSGWTPEGKDKTR 99

[Close]

BLAST of Spo06615.1 vs. UniProtKB/TrEMBL
Match: A0A0K9S1K7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_009800 PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 3.400e-42
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 1


		  
Query: 1  MATFGAARSFLRSTTTARSAVPRFAAASKPKSNTFSPSFNLPKQKNLSAPRIFRSPVELS 60
          MATFGAARSFLRSTTTARSAVPRFAAASKPKSNTFSPSFNLPKQKNLSAPRIFRSPVELS
Sbjct: 1  MATFGAARSFLRSTTTARSAVPRFAAASKPKSNTFSPSFNLPKQKNLSAPRIFRSPVELS 60

Query: 61 CCVESLLPYHTATASALLTSMLSVACRSGWTPE 94
          CCVESLLPYHTATASALLTSMLSVACRSGWTPE
Sbjct: 61 CCVESLLPYHTATASALLTSMLSVACRSGWTPE 93

[Close]

BLAST of Spo06615.1 vs. UniProtKB/TrEMBL
Match: A0A0K9S003_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_009800 PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 3.400e-42
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 1


		  
Query: 1  MATFGAARSFLRSTTTARSAVPRFAAASKPKSNTFSPSFNLPKQKNLSAPRIFRSPVELS 60
          MATFGAARSFLRSTTTARSAVPRFAAASKPKSNTFSPSFNLPKQKNLSAPRIFRSPVELS
Sbjct: 1  MATFGAARSFLRSTTTARSAVPRFAAASKPKSNTFSPSFNLPKQKNLSAPRIFRSPVELS 60

Query: 61 CCVESLLPYHTATASALLTSMLSVACRSGWTPE 94
          CCVESLLPYHTATASALLTSMLSVACRSGWTPE
Sbjct: 61 CCVESLLPYHTATASALLTSMLSVACRSGWTPE 93

[Close]

BLAST of Spo06615.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RJS4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_064130 PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 3.500e-34
Identity = 83/95 (87.37%), Postives = 88/95 (92.63%), Query Frame = 1


		  
Query: 1  MATFGAARSFLRSTTTARSAVPRFAAASKPKSNTFSPS-FNLPKQKNLSAPRIFRSPVEL 60
          MA+F AARSFLRS+TTARSAVPRF+AASKPKSN FSPS FN+PKQ  LSAPRIFRSPVEL
Sbjct: 1  MASFAAARSFLRSSTTARSAVPRFSAASKPKSNPFSPSSFNIPKQNTLSAPRIFRSPVEL 60

Query: 61 SCCVESLLPYHTATASALLTSMLSVA-CRSGWTPE 94
          SCCVESL+PYHTATASALLTSMLSVA CRSGW PE
Sbjct: 61 SCCVESLMPYHTATASALLTSMLSVAPCRSGWFPE 95

[Close]

BLAST of Spo06615.1 vs. UniProtKB/TrEMBL
Match: A0A0J8ENP9_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g182610 PE=4 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 3.700e-28
Identity = 75/96 (78.12%), Postives = 82/96 (85.42%), Query Frame = 1


		  
Query: 1  MATFGAARSFLRSTTTARSAVPRFAAASKPKSN-TFSPSFNLPKQKNLSAPRIFRSPVEL 60
          MATF AARS LRS+ TARSA PRF+AA K KSN +F+ +F+LPKQ  LSAPRIFRSPVEL
Sbjct: 1  MATFAAARSILRSSATARSAAPRFSAAPKTKSNPSFNSTFHLPKQNPLSAPRIFRSPVEL 60

Query: 61 SCCVESLLPYHTATASALLTSMLSVACRS-GWTPEG 95
          SCCVESL+PYHTATASALLTSMLS A R  GWTPEG
Sbjct: 61 SCCVESLMPYHTATASALLTSMLSGAPRRFGWTPEG 96

[Close]

BLAST of Spo06615.1 vs. ExPASy Swiss-Prot
Match: NFD6_ARATH (Protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=NFD6 PE=2 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 2.300e-7
Identity = 42/92 (45.65%), Postives = 59/92 (64.13%), Query Frame = 1


		  
Query: 2  ATFGAARSFLR--STTTARSAVPRFAAASKPKSNTFSPSFNLPKQKNLSAPRIFRSPVEL 61
          A    ARS LR  S+ +A ++  RFA+ +K     F  +    ++  L +P   R+PVEL
Sbjct: 5  AVLSGARSMLRAASSRSAAASTGRFASQAKSAPPLFRAT---ARRSPLLSP--LRNPVEL 64

Query: 62 SCCVESLLPYHTATASALLTSMLSVACRS-GW 91
          S CVESLLPYH+ATASAL+TS LS++ ++ GW
Sbjct: 65 SFCVESLLPYHSATASALMTSKLSISGQTYGW 91

[Close]

BLAST of Spo06615.1 vs. TAIR (Arabidopsis)
Match: AT1G28395.2 (unknown protein)

HSP 1 Score: 91.7 bits (226), Expect = 2.800e-19
Identity = 56/95 (58.95%), Postives = 68/95 (71.58%), Query Frame = 1


		  
Query: 6   AARSFLRSTTT-ARSAVPRFAAASKPKSNTFSPSFNLPKQKNLSAPRIFRSPVELSCCVE 65
           AARS  RS  + A S   RF+A  KP  ++   +F +PKQ  L+  RIFRSPVELSCCVE
Sbjct: 3   AARSVFRSAASRASSTAFRFSAGPKPMPSSARTAFRMPKQSPLTN-RIFRSPVELSCCVE 62

Query: 66  SLLPYHTATASALLTSMLSVACRSGWTPEGKDKTR 100
           ++LPYHTATASALL SMLSV+ R GW  +G D+TR
Sbjct: 63  TMLPYHTATASALLNSMLSVS-RRGWIVDGLDETR 95

[Close]

BLAST of Spo06615.1 vs. TAIR (Arabidopsis)
Match: AT2G33847.1 (unknown protein)

HSP 1 Score: 82.8 bits (203), Expect = 1.300e-16
Identity = 54/86 (62.79%), Postives = 62/86 (72.09%), Query Frame = 1


		  
Query: 6  AARSFLRSTTTARSAVPRFAAASKPKSNTFSPSFNLPKQKNLSAPRIFRSPVELSCCVES 65
          AARS  RS    R+AV    + +KP  ++   SF LPKQ  LS  RIFRSPVELSCCVE+
Sbjct: 3  AARSVFRSGV-GRAAVAALRS-TKPMPSSARSSFKLPKQSPLSH-RIFRSPVELSCCVET 62

Query: 66 LLPYHTATASALLTSMLSVACRSGWT 92
          +LPYHTATASALL SMLSV+ RS WT
Sbjct: 63 MLPYHTATASALLNSMLSVSGRSIWT 85

[Close]

BLAST of Spo06615.1 vs. TAIR (Arabidopsis)
Match: AT2G20585.1 (nuclear fusion defective 6)

HSP 1 Score: 56.2 bits (134), Expect = 1.300e-8
Identity = 42/92 (45.65%), Postives = 59/92 (64.13%), Query Frame = 1


		  
Query: 2  ATFGAARSFLR--STTTARSAVPRFAAASKPKSNTFSPSFNLPKQKNLSAPRIFRSPVEL 61
          A    ARS LR  S+ +A ++  RFA+ +K     F  +    ++  L +P   R+PVEL
Sbjct: 5  AVLSGARSMLRAASSRSAAASTGRFASQAKSAPPLFRAT---ARRSPLLSP--LRNPVEL 64

Query: 62 SCCVESLLPYHTATASALLTSMLSVACRS-GW 91
          S CVESLLPYH+ATASAL+TS LS++ ++ GW
Sbjct: 65 SFCVESLLPYHSATASALMTSKLSISGQTYGW 91

The following BLAST results are available for this feature:

BLAST of Spo06615.1 vs. NCBI nr
BLAST of Spo06615.1 vs. UniProtKB/TrEMBL
BLAST of Spo06615.1 vs. ExPASy Swiss-Prot
BLAST of Spo06615.1 vs. TAIR (Arabidopsis)

BLAST of Spo06615.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902238209\|gb\|KNA25081.1\|	9.6e-46	100.	hypothetical protein SOVF_0098...	[more]
gi\|902238208\|gb\|KNA25080.1\|	4.9e-42	100.	hypothetical protein SOVF_0098...	[more]
gi\|902238207\|gb\|KNA25079.1\|	4.9e-42	100.	hypothetical protein SOVF_0098...	[more]
gi\|902222410\|gb\|KNA19164.1\|	5.0e-34	87.3	hypothetical protein SOVF_0641...	[more]
gi\|731350250\|ref\|XP_010686408.1\|	1.5e-30	78.2	PREDICTED: uncharacterized pro...	[more]

BLAST of Spo06615.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9S005_SPIOL	6.7e-46	100.	Uncharacterized protein OS=Spi...	[more]
A0A0K9S1K7_SPIOL	3.4e-42	100.	Uncharacterized protein OS=Spi...	[more]
A0A0K9S003_SPIOL	3.4e-42	100.	Uncharacterized protein OS=Spi...	[more]
A0A0K9RJS4_SPIOL	3.5e-34	87.3	Uncharacterized protein OS=Spi...	[more]
A0A0J8ENP9_BETVU	3.7e-28	78.1	Uncharacterized protein OS=Bet...	[more]

BLAST of Spo06615.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 1


Match Name	E-value	Identity	Description
NFD6_ARATH	2.3e-7	45.6	Protein NUCLEAR FUSION DEFECTI...	[more]

BLAST of Spo06615.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 3


Match Name	E-value	Identity	Description
AT1G28395.2	2.8e-19	58.9	unknown protein	[more]
AT2G33847.1	1.3e-16	62.7	unknown protein	[more]
AT2G20585.1	1.3e-8	45.6	nuclear fusion defective 6	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33156	FAMILY NOT NAMED	coord: 1..93 score: 7.0
None	No IPR available	PANTHER	PTHR33156:SF10	SUBFAMILY NOT NAMED	coord: 1..93 score: 7.0

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006090	pyruvate metabolic process
biological_process	GO:0009086	methionine biosynthetic process
biological_process	GO:0009098	leucine biosynthetic process
biological_process	GO:0009793	embryo development ending in seed dormancy
biological_process	GO:0000478	endonucleolytic cleavage involved in rRNA processing
biological_process	GO:0009220	pyrimidine ribonucleotide biosynthetic process
biological_process	GO:0009088	threonine biosynthetic process
biological_process	GO:0009099	valine biosynthetic process
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0006164	purine nucleotide biosynthetic process
biological_process	GO:0009089	lysine biosynthetic process via diaminopimelate
biological_process	GO:0006563	L-serine metabolic process
biological_process	GO:0009097	isoleucine biosynthetic process
biological_process	GO:0006544	glycine metabolic process
biological_process	GO:0015931	nucleobase-containing compound transport
biological_process	GO:0006812	cation transport
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
cellular_component	GO:0005654	nucleoplasm
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0044444	cytoplasmic part
cellular_component	GO:0009941	chloroplast envelope
molecular_function	GO:0003942	N-acetyl-gamma-glutamyl-phosphate reductase activity
molecular_function	GO:0003852	2-isopropylmalate synthase activity
molecular_function	GO:0003690	double-stranded DNA binding
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0050661	NADP binding
molecular_function	GO:0051287	NAD binding
molecular_function	GO:0004073	aspartate-semialdehyde dehydrogenase activity
molecular_function	GO:0015391	nucleobase:cation symporter activity
molecular_function	GO:0005488	binding

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo15150	0.79	Barchart \| Table
Spo26185	0.76	Barchart \| Table
Spo05862	0.76	Barchart \| Table
Spo25451	0.76	Barchart \| Table
Spo25158	0.73	Barchart \| Table
Spo07928	0.73	Barchart \| Table
Spo10461	0.73	Barchart \| Table
Spo17903	0.72	Barchart \| Table
Spo07490	0.72	Barchart \| Table
Spo00568	0.72	Barchart \| Table
Spo25805	0.71	Barchart \| Table
Spo06614	0.71	Barchart \| Table
Spo02922	0.71	Barchart \| Table
Spo00806	0.71	Barchart \| Table
Spo14353	0.71	Barchart \| Table
Spo16806	0.71	Barchart \| Table
Spo16134	0.71	Barchart \| Table
Spo07537	0.70	Barchart \| Table
Spo19901	0.70	Barchart \| Table
Spo10961	0.69	Barchart \| Table
Spo22145	0.69	Barchart \| Table
Spo14742	0.68	Barchart \| Table
Spo02706	0.68	Barchart \| Table
Spo18209	0.68	Barchart \| Table
Spo18908	0.68	Barchart \| Table
Spo21580	0.68	Barchart \| Table
Spo24044	0.68	Barchart \| Table
Spo25351	0.68	Barchart \| Table
Spo16184	0.67	Barchart \| Table
Spo16150	0.67	Barchart \| Table
Spo25135	0.67	Barchart \| Table
Spo26857	0.67	Barchart \| Table
Spo22182	0.67	Barchart \| Table
Spo20053	0.67	Barchart \| Table
Spo19500	0.66	Barchart \| Table
Spo22452	0.66	Barchart \| Table
Spo24573	0.66	Barchart \| Table
Spo09146	0.66	Barchart \| Table
Spo16470	0.65	Barchart \| Table
Spo01061	0.65	Barchart \| Table
Spo15711	0.65	Barchart \| Table
Spo07920	0.65	Barchart \| Table
Spo13707	0.65	Barchart \| Table