Spo06553 (gene)

Overview
NameSpo06553
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
Locationchr3 : 27484773 .. 27492643 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCAGGTCTCCACCCTCAAGATATACTCCAGCACTTACCGCTGGTAAACGATAGAAGCCCTCATTTGGCTCATTATAGGTACAGGTTAGATCTCTCATCATTTGTATTCCTTGCAGAGCTGCACTTGTTTTTTCAGAATATGCATCTGCATGTCAAGTCCATCAGCTGTCTGTAGGTTTTACACAGTAAATTATCTGCACTACTGCAGAATGCAGACATCACAAGTTCACTGTCCCTGATATTTTTTTTATTAGTATACATGATACATTAGGAAATTGAAAGACATCAAAGGGGTGTCACCCATGAACAAAACAAGGGTAAAGGACAAAAAGCTCATGCTCTCGAACTATCATATATGCAATTTTTCTACAATATCATGAAAAGTTAAGTGTTGCACATAACCTAATACTTTACTCATGGCTACAGCTATCCAGAAAGCCCCCCAAAAAAAAAGAAACTCAAAAACTTGACATGGGGAGCCTTGAGGCTATACCGAAAGAGTTCAATGTTTCCTTTCTACCAAAAATCATTCCACCTTACGCAATAAGCTTATACTCCGCAAGTGTTTTAGCAGCGAATGCTTAGTAACAGCAGTACTTGTTTAAAGATACTTGAATTTCCGAATCAATAATCCTTGGTTGGTGACTTTCTGCTCCTAATGACTGTAGATGGCTATTGGCAATATTTAAGTTGCACAAGCCACAAAGTGCTAAATCTGTACAGGTTCCTTCTGTTTAATATTTTATTTTGACATTTTCAGACCTTTTACTTATTTTACCCCGTTGGAACACATATAGATTCCATAATATTATGCCCTTGAAAACTCAAACTGTATACTTCATACATCTCAAGCTTTGTGATTGTTGTTGATTTATTTCACTGAAGTGATTTATAGTGTTAGCCTATTGTTTGTTGCTAAAAAACAGAGTTAAGCTCATTATTGGGGTTTAAGTTTTGCAATAAATCACCAATTGGGACCTCACTTTTTTTTGGTCAATAATTGGGACCTAAGGTTAGATTTTTGGTAGGTTAACTCACCTTTAACTCAAGGTTGACTATTCAAACTAATAAAATAAATCAAAAATAAATTACANCCCTTCCTAGTGGAGAAATAGTGAAATGTAGAACCATGTATAGAGATTGTCCCATTCTAATAGAAAAAGTAGAGTTTCTAGCAGACTTAGTAGCTTTTGACCTATCTGAATTTGATATAATCTTGGGAATGAATTGGTTGACTAAGTATGAAGCTAACCTTAATTGTTCGAGGCAAAGTGTGACCCTTAGAACACCAAATGGAGATAGAGTTTCCTTCCATAAGTTAGTAAGAAAACCAACGATTCAAATTGTCCATGCTTTGAGAGCACGTAAAATGATTGAGAGTGGTTTATCTGGTTATCTATGTAGTGTTGTTGACCTAAATACCCCTGCATCTTCCATTACTGACATACCTGTTGTTTGTGAATACCCACATGTTTTTCCAGAAGAAATACCTAGTATGCCCCCACCAAGAGAATTATATTTCAGCATTGAATTAATCCCAAGATCCACCCCTATTTATAAGGCACCATATAGAATGGCACCAGCTGAGTTACAAGAATTAAAGAAACAATTAGATGAGTTANTAAGGCACCATATAGAATGGCACCAGCTGAGTTACAAGAATTAAAGAAACAATTAGATGAGTTACTTGGAAAAGGATATATCCGACCTAGTGTTTCACCTTGGGGAGCCCCTGTATTGTTTGTGAAGAAAAAGGACGGAACTTTGAGGTTATGCATAGACTATAGAGAGTTAAACAAGATTACTATTAAGAATAAGTATCCTTTACCCCGTATTGATGATTTGTTTGACCAACTTAGAGGTGCATAAGTGTTTTCAAAGATTGACTTGAGGTCTGTATACCATCAACTTCGAATTAAACCCGAGGATATTCCAAAGACAACCTTTAGAACTAGATATGTTCACTATGAGTTTGTCGTGATGCCATTTGGGTTAACCAATGCGCCAGCTGTATTTATGGATTTAATGAACCGCATTTTCAAACCATACCTCGATAAGTTTGTAGTTGTTTTTATTGATGATATTTTAGTATATTCTAAGGGTAATGAGGAACACGAGGAGCATCTGAGAAAAGTGTTAGATATGTTGATTGAAAACCAGTTATANGAGCATCTGAGAAAAGTGTTAGATATGTTGATTGAAAACCAGTTATATGCCAAGTTGTCGAAATGTGAATTCTGGCTTAAGGAAATATCATTTTTAGGTCATATTATTTCCGAGAAAGGTGTATCGGTTGATCCCGAGAAAATAAAAGCAATTGTGGAATGGCCTAGACCAACCAATGTACCTCAAGTACGGAGTTTTATGGGTTTAGCTGGATATTATCGAAGATCCGTTCAAGACTTTTCTAAGGTTGCCTTACCCATAACCCGATTAGTTAGGAATTTGTGTGGAACGATGATTGTGAATGTGCATTTCAAGAACTTAAGAAACGTCTCACCACTGCCCCTATTCTTACCCTTCCATCTGGAACTGAGGGATTTGTGATTTATAGTGATGCTTCTAAGAATGGGTTAGGATGTGTCTTAATGCAAAAGGAAAAAGTTATAGCTTATGCTTCACGTCAACTCAAAATTCATGAACAAAACTACCCTACCCATGACCCCGAACTTGCAGCTGTCGTTTTCGCTCTCAGAATTTGGAGACATTATTTGTACGGAACATCGTGTCAAATTTTCACTGACCATAAAAGTCTTAAGTATATTTTCACCCAAAAAGAACTCAACATGAGACAACGTAGGTGGTTAGAACTTCTTAAAGATTATGACCTTGATATTCAATACCATCCCGGAAAGGCTAACGTTGTTGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCCTTCTGTTTAATATTTTATTTTGACATTTTCAGACCTTTTACTTATTTTACCCCGTTGGAACACATATAGATTCCATAATATTATGCCCTTGAAAACTCAAACTGTATACTTCATACATCTCAAGCTTTGTGATTGTTGTTGATTTATTTCACTGAAGTGATTTATAGTGTTAGCCTATTGTTTGTTGCTAAAAAACAGAGTTAAGCTCATTATTGGGGTTTAAGTTTTGCAATAAATCACCAATTGGGACCTCACTTTTTTTTGGTCAATAATTGGGACCTAAGGTTAGATTTTTGGTAGGTTAACTCACCTTTAACTCAAGGTTGACTATTCAAACTAATAAAATAAATCAAAAATAAATTACAAGAGTTATGACTTAATAAGTACGGAGTAGTATTATTTGCAATTATTTAGGGGTTTTATTTGGGTTTATTGGGCACTTGTTAAGTTTGTGATTTTTTGTTCCCCTCAAAAAAAAAAAAATGTGATTTTTTGTGAGATTTATGATTGAATTGGTTAATTTTGTGATTTTGTATGATATTAATGCTGCTAAATTTTATTGTTTTTGTGTTGATTTTGATCGATTTGTTATTGTTTGATTTTTTTTTTGTTCTTTTTAATTTTTTTTAATTTTTTATGTTTACTTCGTGATGTTTATACCTTAATCACTTAAGGAGAGCAAAATTTTTGCATACTTTATAAATTGATTGAAAGTAAAATGTGGTTCGACCATTGTTTCAAATGAAAATGCCTTTTAAAGGGGTGACATACAGCGAGAAGTATGATAGATTGATACAGACTACGAAGTATTTTTAGGATGTGACTCGTATACTCATTTTCTTTTAAAAAAACATGGGTCGGAACGGGCTGGGCTATGATAAATAGTTCACTTAAACTGACTAAATATGACTTGTTTTTTACCTGAACAGACCAATTTCATTAAGTTTGGGCCAGAGCCGCCCTTGACATGACCCATTTTATAGCTCTATGTTAAAACACTCAAGGGAACATTTTGGTTTTGTTGGTTTCGAAGTAAAATTGTGTAAATATTAGAAATTAGTTACTAACATTTTTTTTTATCAATTTATCATTGAACTGTGAACTATAAATCTATAATGGACGAACTTCATTAATAAAGAAAATACTCCCTCCGTATTTTTTTAAGAGATACACTTGCCTTTTCCGGCCGTATTTATTTAAGAGATACACTTGCCATTTTTAGTAACTTATCAACCCCACCATCTAATTAAATAATACATCTAATATACCCTATCACCCACCATCCTATTAAACAAATATTTTCATAAACCCACCCCACCCTCCACCCACCAAAATGACATGGTCCCCACATATTTAATTATTAAAATATCTATCCAACCCCACTTGCTTTATTATTTTATTTCATTCAATTATTCTTCTTAATACCCATGCCCGGCCAAGTGTATCTCTTAAAAAAATACGGAGGGAGTAGAAATTAATGTGGTGTTGGTAGTTTTTGATGATGTTTGTTCAAGAGGGGATATTGGAGGTGTAAGAATAACAATTAATTAATTAAATTAGTATTGTATTTTTACAAAAATAAAATGTTATAATTATATTTCTTATTTCTTAACCCAAGGACTTAACATTTTTTTAACCACCATAGTTAACTTTTTCTAAAAAAGTAAGATGAGGTCCCAATAATTAACCAAAAAAAAGTGAGGTCCCAATTGGTGATTTTTTGTAAAACTTGGACCCCAATCATGGGGTTAACTCCTAAAAAACATTATATCTTCCAAAGAAGTTTAACGTTGTTCTAAGACTCGATTTTTTTATTTAAAAAGACTTTTGATTGTTTCTGTTCCGAGTCTTTGATCTCTTATGTCTTTGTGTAAGTAATACTTTGATACTCCTAGGCTATGAAATCTAGTACTCCCTCCATTCCTGAATACTCGCAACACTTGCCTTTTTCGGCCATTTATGAATTCATGCAACACTTCCTATTTTGGCACTAGACCACTAATTCTTTATTGTTTCTCTTTCCCACTAACCTCACTTCACTTGTACCAATTCTTTATTTTTTTCTCTCTCCTACTAACCCCTTGCACCACTTCTTTATTGTTTCTCTCTTCCACAAACAATTAAAATATATCATTACTCTTCTTGCACACATTAATTTAAAATATCTCATTACTACCCACAAACCTTCCATAAACTATGCGCAAACACAAGTGTTGCACGTATTCCGGAAAAAATGGAGTATTGAAGAGGAAATTAAATGTTTACTTTTGTAGTGTTTCTCATTTAGGTTTTAGGTTTTTGTCTGTATATTGGAAAAATACAATTGTGAAGATAGTACAGTTGTCAACTAGTGAGATGCAGGTAATTATGCAGTAAACATGTGATTTTAACATATGAAGAACTGGCAGATGTTGAAAAATAGTCGTAAAAAACAACACCTGAGACTCGTGTGAATGATTTTGATGGGAATCTTTTTGTTTGTTGTTATCGGTACAAGCAGAAAACTCACACTAAACTCATACTCCTTTAATGCGAACGGGAGGAATGAACTGACTGAGATCAAGAACAAGAAGAGAAGGCACAGGCACCACAGAGTAACATTCTATTCATGTGAGTAGCAGTAGTACACTAGTACTCATATGGCACGTATCTACACACTTGCAATTTATTTCAACAAAAAAATTGTTTTTGTGTTGAGTTTGAATTGTTAATTTCCTTCCAAGTAAATAGATAAAATCACAAAAATCAATTCCATGTTTATTTTGCAATACAAATATAAGAATTATAATTTCATACTACAAATATGTCGTGTTTGATTTTTTTATTTTAATAAATTGATTGTCAAATGTTTGTGTGGGAAAAATGCAGACAAAAAATAGTCAGATGGAGGGAGTGATTTCATATGCAGGAACTTCTAATGGCTTAATGCACCAACGTTTTGCAGTGTGAATGTAGGCTTGTACTCCGGATGTTCAAATGTTCCTATGGTCCGACTTCTGAGGAAGGAAAATAATGGAGATAAGACATGCTCCTTTCACAAGGATGAAGTGTAAGGAGACTTCACTGGCAAGTCTTCACAGTTTTCATTCCAAGCTTGGGCTTTTCATGTTTCCGTAGCTGAGATATCATCTTCTTTGAAACTTGTTTTTCTGTATGGTCCTACATATGCTCAAGTACACTCAAACTTACTGCTGATGGACAATTTGGGTATGGAGAAGTGTTCCTTCTCAGAGCTGCCCTGTTTTTTCTGCAAGTACCGTGACAACCTCAGGAAAGAAGAAAACTTTTGA

mRNA sequence

ATGTCAGGTCTCCACCCTCAAGATATACTCCAGCACTTACCGCTGGTAAACGATAGAAGCCCTCATTTGGCTCATTATAGAAAACTCACACTAAACTCATACTCCTTTAATGCGAACGGGAGGAATGAACTGACTGAGATCAAGAACAAGAAGAGAAGGCACAGGCACCACAGAGTAACATTCTATTCATACTTCACTGGCAAGTCTTCACAGTTTTCATTCCAAGCTTGGGCTTTTCATGTTTCCGTAGCTGAGATATCATCTTCTTTGAAACTTGTTTTTCTGTATGGTCCTACATATGCTCAAGTACACTCAAACTTACTGCTGATGGACAATTTGGGTATGGAGAAGTGTTCCTTCTCAGAGCTGCCCTGTTTTTTCTGCAAGTACCGTGACAACCTCAGGAAAGAAGAAAACTTTTGA

Coding sequence (CDS)

ATGTCAGGTCTCCACCCTCAAGATATACTCCAGCACTTACCGCTGGTAAACGATAGAAGCCCTCATTTGGCTCATTATAGAAAACTCACACTAAACTCATACTCCTTTAATGCGAACGGGAGGAATGAACTGACTGAGATCAAGAACAAGAAGAGAAGGCACAGGCACCACAGAGTAACATTCTATTCATACTTCACTGGCAAGTCTTCACAGTTTTCATTCCAAGCTTGGGCTTTTCATGTTTCCGTAGCTGAGATATCATCTTCTTTGAAACTTGTTTTTCTGTATGGTCCTACATATGCTCAAGTACACTCAAACTTACTGCTGATGGACAATTTGGGTATGGAGAAGTGTTCCTTCTCAGAGCTGCCCTGTTTTTTCTGCAAGTACCGTGACAACCTCAGGAAAGAAGAAAACTTTTGA

Protein sequence

MSGLHPQDILQHLPLVNDRSPHLAHYRKLTLNSYSFNANGRNELTEIKNKKRRHRHHRVTFYSYFTGKSSQFSFQAWAFHVSVAEISSSLKLVFLYGPTYAQVHSNLLLMDNLGMEKCSFSELPCFFCKYRDNLRKEENF
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo06553.1Spo06553.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo06553.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of Spo06553.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of Spo06553.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of Spo06553.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
cellular_component GO:0009535 chloroplast thylakoid membrane
molecular_function GO:0005524 ATP binding
molecular_function GO:0005516 calmodulin binding
molecular_function GO:0008568 microtubule-severing ATPase activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo036650.67Barchart | Table
Spo241480.66Barchart | Table
Spo013440.65Barchart | Table