Spo06488 (gene) | SpinachBase

Overview


Name	Spo06488
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	TRNA/rRNA methyltransferase family protein
Location	SpoScf_02436 : 12074 .. 18225 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATACGAGTAAACTTGTTTTTGTTTCCGTCGATCTTCATTCCTCTAACATTACTCTTTAAGTCTTAAGCTTTGGCGCCAGAAGCACAGTTAAGCAATAAGCACCACTCTTCTTTGTCGTATCATACACAATGAACATCTCCCAAACCCTAACTCGAACTTCACTCTTATCTTCTCATTTCTCCATTCTTAATCTCCCAAAGCTTCCTTTTCCTCACGGTATTCTCTCTCTTCTCTCTCTCGTTCTGCATTGATGTTTTCCTCTAATTTTCTCCAACTTTTCCATTTTTAGGGTTCCAGCAAAATTGCCGAAGAATACGATGCATACCAGAGCTCTCAATCCCAGAATCCATCGCAATTTCCGAACCCTTAATCCCCAACTCAACCGAAGATTCGGCGGAAGACACAGTGGAGCAATTACTCTCTCCCCAGGACAACAAAATCGTCTCTAAAATGATGAAAATGGAGAGAAAACCAAGTGGTGGTGCTGTTCTACGGGATAATAATGGCCGTTGGTTTCCGTACCTTGATAAATTTAAGGTGAATGATGTTTATTTGAGTAGTGCTGAAGTATTGGAGGCGATTGATCCTCTTATATTGGATGTGAGGAAAGAGAGGTTCAGGAATGTGGTGAGGAATCGGAGTTTTGGTGTTTGTCTTGTTGTTGAAGGATTGAGCGATTACGGAAACGTTTCGGCTGTGTGTCGGTCTGCAGATGCTCTTGGCTTGCAGTCTGTCCATGCTGTTTCTTGCGATAGCTCGAAAAGGTGGTGGAACATCACTTTTTTAGGTGAAAGAGTTTTTCTTTCTTTTGCCTCGTGTTTTTGTTTAAGTACATTTGCTTTGATTTTCGGTCCTTTGCAGTTTTAACACTTGTTTAATAAGTATTTGATCAAGCTATAGAATTTGTTTATGCTGCTACAGTATTTAAAATGCTAGTTCAATTATGAAGGGTGTTCAGTTTTCTTATCTAAAGCCGAGGCAGAATACAGTTTAGTTTGACATCTCTGATGTTTGATATATGTTGGAGGAACTGAGTCTCTTGCAACAAAAAACACAGATATAATAAATTGATACAATTTCCTATTATTTTTGTATGTCATGTAATTAGTAAGTATGGAATTGATGATTGCAAGGAGCTAAGGAACGGTCACGTTTAATTGTTATTGTAGGGTACCTTGCACAGTAATCCACAGCTTACTAGACTCCTGTTATTCCAGATTCGAACTGAGATAGGCCCCTGGATTGGAGGGGAGCTCTACCAACAATTGTGGTTGTATTCCTGCCCTGTTGTTAAGCTAAAACAGCTCCTTACTAGCTGATCTAAGCACTTGTTAGGAGATTGATAGAATTGATAACTAATACAATTGTATAATTTTCTTGCCATTAGTTATTAGAAACTATGGCGTTGTCATGTTATAATTTACATCAGCAGAAAATGAATGCCTTAGGTGAATAACTGTTGTAGTTGTTTTCACGAGTAAGTTGTTAATGGAAATCTTATTTGTTCTTTTAGAAAGAATAAAATATGGCAGTGTTGTGTATCAATTACTTTCAACTGTTTCTGACGTTCTGTAACCTTTTTGTGTCTTGATTTTTAGTCTTAAGTTGTTTTTTTAAGGCTTCTGCTTGTGTGCACAGGTTTAGAGATAATCGACATGTCAGCATGGGTTCAGAAAAGTGGCTGGATATTGAGGTCTGGAACTCAACCCCAGAATGCTTTAATGTTCTGAAGTCACGTGGTTACAGAATAGCTACTACACATCTGGGAAAGAATACAGTAATAATCGATTTTCTTTTTGAGAATTTATTTTATCGCTTGGGCCTCTCTGTCATCATTCTTCTGCATAATGTGGATCTCATTGATTTATTTATGTTCTTTTGTACTTTTCTTCTACTGCTCTCAGGCTTCTATACATGACATAGATTGGTCATGCCCAACTGCCATTGTTGTTGGTAACGAGAACAGGTGATTGTTCTTTATACGCATCAATTTCATGATATAGATTTATTTTTTTTTATACATTTTTCTCTTCTTCTACAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCTTATCAAGGATGATAACATTATTTTCCCTTATCTGATATTTTGCCAGTAAACTTCTTTTTTGCTATCTTCCATGAGAAGATAGGATATCTGATATCCATAATGAGTGTACTCTTGAGTTTTGATTAAGTCTTTTTCAATAAAAGGAACTCATCTTTCTGGATTTTCTGATTTTTCATTAGTATTACTGTATATGTTTATTACTGATACGGAGTATAAGATGACATTGACATTTATCTTCCTGTAAATAACTGAATATGCACTGTGTTACCTGGGGTTTTTTTTGGGTCATTTGAGAATCTTAGTCCTTGTAGCTTCTGTTGTATTTATTATCGTCTGTGATACGTCATGAACTTTTCTAAACTATCGACTAATTGTTGCAAATTGTTAAGATTGAAAATGTTCATTAAAAGGATGACATGAAGGTTTCCTAATGTTTGACATAACCTGGTGATGACATTCCCGCATATGCTTTGTTTTATTATTCCCCTATATGAAGGAAAAAAATGATTGTAAAGTAGTATATTCCCCTATGTTACCTGGGACTTGGATACCTATACCGGACACGGGTACGTGGCCAAGTGTCCGACAGCATGTCAGGGTGTCAAGGATACGACATGGGTTTTTGAGTAAAGTGAAGAGTTCATGTAACATAGTACATTCCCTCTAGCATATTCTTTGCTTTATTAATCCCCTGTGTAAAGGAAAAATAATTGCAGAGTACTCCCTTCGTCCCTTTTTTATTGCTCCATTAAAGAAACTTCACTTTATTAAGAGTTGGGTGTAAATAATGCACATGGAGTAGTGAAGTGGTCCCATGAGGAGAGAGATAGAGAGAGAACAAGTGGAAAAACCTACCATTTAAGTTATGGAGCAATCTCAAAGGGACAACCAACAAAGGAAAATGGGGAAAACATAAAGGGGCGGAGGGAGTAGTACATAAACCTTTGTGTTATCTTTTCTTCTACACCAATGAGTATTACTCTATAAAAAGAACGGTGGGCATGTATATTCATTTTACTTTCTTTATATTCTCTATTTCCGGTAAGATTAGATTGTTAAAGTTTTTCATTGTGTAACATGAGAGTATTTCTTGTCATATCCGAAGGATTTGTCTTAAAGTCCAATAGGAGGCTCGACACCTTTCAGGGTATCAGTTTTGATTAAGTCTTTTTCAATAAAAGGAACTCATCTTTCTGGATTTTCTGATTTTTCATTAGTATTACTGTATATGTTTATTACTGATACGGAGTATAAGATGACATTGACATTTTTCTTCCTGTAAATAACTGAATATGCACTGTGTTACCTGGGGGTTTTTTTGGGTCATTTGAGAATCTTAGTCCTTGTAGCTTCTGTTGTATTTATTATCGTCTGTGATACGTCATGAACTTTTCTAAACTATCGACTAATTGTTGCAAATTGTTAAGATTGAAAATGTTCATTTAAAAGGATGACATGAAGGTTTCCTAATGTTTGACATAACCTGGTGATGACATTCCCGCATATGCTTTGTTTTATTATTCCCCTATATGAAGGGAAAAAATGATTGTAAAGTAGTATATTCCCCTATGTTACCTGGACTTGGATACCTATACCGGACACGGGTACGTGGCCAAGTGTCCGACAGCATGTCAGGGTGTCAAGGATACGACATGGGTTTTTGAGTAAAGTGAAGAGTTCATGTGACATAGTACATTCCCTCTAGCATATTCTTTGCTTTATTAATCCCCTGTGTAAAGGAAAAATAATTGCAGAGTACTCCCTTCGTCCCTTTTTTATTGCTCCATTAAAGAAACTTCACTTTATTAAGAGTTGGGTGTAAATAATGCACATGGAGTAGTGAAGTGGTCCCATGAGGAGAGAGATAGAGAGAGAACAAGTGGAAAAACCTACCATTTAAGTTATGGAGCAATCTCAAAGGGACAACCAACAAAGGAAAATGGGGAAAACATAAAGGGGCGGAGGGAGTAGTACATAGACCTTTGTGTTATCTTTTCTTCTACACCAATGAGTATTACTCTATAAAAAGAACGGTGGGCATGTATATTCATTTTACTTTCTTTATATTCTCTATTTCCGGTAAGATTAGATTGTTAAAGTTTTTCATTGTGTAACATGAGAGTATTTCTTGTCATATCCGAAGGATTTGTCTTAAAGTCCAATAGGAGGTTCGACACCTTTCAGGGGAATCTGCGCAAAAGCAATGATTGGATTGTTACTTGAAATTACGAAGAAAGATGAGTACATAGCTGCTTCCTTGCGTGGCGCATGCTACTTTGATATTTTCACTTGAATTCCCCTTATCTGAGCTTGTATTTGACTGTATTTATCTCCTGGAAGGTTATTTGAACTTATTGTACTTGTAAAATGGATCCTGTAGCCCTTATCTGACGTATGTATGTTTACTAGGGTAAAAGAAGAATGGAACAAAAACATAGCTACTCAATAGGTAATATGAACTGTAAAGTTTTAGAGTTTACTCATTTTCTTTTTTTGGAAATTATTAAGCTATTTTAGCATATTTTTAGGGGTAGGTTCATGCTGGTTAGTAAACTGCAAAAGTTTTTTAATCTTGTTGATTTTTAGTATAGGTTGCCTGTGTAATCTATTGTTAGGTGAGTAGGGAATACAATTCCAGCTTCAAGTTTATTGTTTCAGCAATATAATGCCCATTGTGTGTGATGACGGTATGAAAATTGTTCCTTCATGTAATGGGAAGATTTAAGTGCTGCAAGTGATCATGTGTCTGATGTCGCTTGCCTGAGTAATCTATTTTTAAGTGAGTAGGGAATACAATTCCAGCTTCAATTTTTTTGTTTCAGCTATATAATGCCCATTGTGTGTGTACGACGGTATGAAAACTGTTCGTTGATGAAACGGGAAGATTAGGTAATGTCTATAGCTTGTGGACAGTTATGGAAACAAGTATGCTGACATGCCTGATAATATGTGCATTCCTGCAGGGGAATTAGTGAAGAAGCTTTAGAGTTGTCAGACTTGCACTGCAGCATTCCTATGAACGGCATGGTTGATTCTTTCAATGTTTCAGTTGCTGCTGGGATACTGATGCATCAAGCCGTTTTTGACAGAACACTACGCCTGGTGAGGTTGAAATGCTTTAGTTTTCATTGCTTGTTAGGGGCAGTCAAGTAAAATATTTTTGTAATCAGTTTATCACCTCTGCTTTTTAACGGCTGCTTCCATTCCAAAACCCTCTTTAATAGAAAATTATGTTTTATTCATCTAGTTGCTTCTGCTTGCTTTTGCATTCAGATTTTCTGTATGCCAATTGAGGTCCTAATAGTTTTTTAGCAGTTATGTCACTTACGTATAGTGTAGTTTTTTTTATTTCCGACTTTTTTTCTTTTTCTTTTTCGTTTTCTTTTTCTTAATATATTAGATCTTCTTAGTAATTGCGAGCTTTGTGTGTTCAAAAGAATGGTGCTCAGTCAAAAGAAAAATCTGTTTTTCTTGGTGTCAGCAATCATTTTGTCTTAGTAACTTATTCAATTGATATGTTAGATGATTTTATGTTAACTGAGGTTGTAACTAGTCTAGATATTCGGAAGCTTATTATGAAGGTAGAATTTAAGGTCTTCAGTAGAATTTGATGACGGTGCTTGAAGCTTCTGTTCTGATTATAGAACTGTCAAAATGTTTCTGCATGCAACTGGTTCTTTTGTTTATATTTTTAATCCCATTTGCAGGGGTCTCATGGGGATCTAACATCAGAAGAAAGTCAAATCTTACTAGCAGAATTTTTTCTTCGTCATAGCAAGAGTGCAATCAGCATGGCCTACGAGTATGCTAAAAGGAAGTTGTCCAACCCAACGCCGAAGCTTTGATTCATCACCTTGCAAAGTTTCAATATTTAGAGGCAGGGGCATTTTAGGTAGTAGAAATGTAGAATTGTAATCAATTTGCTAGTAGAATGAAGGATAAGATAGGTAGTAGAAATTATTTTTTTGCGAACGATTTCTTATAATTGCTAAAAGCAAAAATTAATTCCCCATTACATTGGTTAAAAAACTATTTCCGATAATACTATCCAGGTAGAGCGGTTTATAACG

mRNA sequence

ATACGAGTAAACTTGTTTTTGTTTCCGTCGATCTTCATTCCTCTAACATTACTCTTTAAGTCTTAAGCTTTGGCGCCAGAAGCACAGTTAAGCAATAAGCACCACTCTTCTTTGTCGTATCATACACAATGAACATCTCCCAAACCCTAACTCGAACTTCACTCTTATCTTCTCATTTCTCCATTCTTAATCTCCCAAAGCTTCCTTTTCCTCACGGGTTCCAGCAAAATTGCCGAAGAATACGATGCATACCAGAGCTCTCAATCCCAGAATCCATCGCAATTTCCGAACCCTTAATCCCCAACTCAACCGAAGATTCGGCGGAAGACACAGTGGAGCAATTACTCTCTCCCCAGGACAACAAAATCGTCTCTAAAATGATGAAAATGGAGAGAAAACCAAGTGGTGGTGCTGTTCTACGGGATAATAATGGCCGTTGGTTTCCGTACCTTGATAAATTTAAGGTGAATGATGTTTATTTGAGTAGTGCTGAAGTATTGGAGGCGATTGATCCTCTTATATTGGATGTGAGGAAAGAGAGGTTCAGGAATGTGGTGAGGAATCGGAGTTTTGGTGTTTGTCTTGTTGTTGAAGGATTGAGCGATTACGGAAACGTTTCGGCTGTGTGTCGGTCTGCAGATGCTCTTGGCTTGCAGTCTGTCCATGCTGTTTCTTGCGATAGCTCGAAAAGGTTTAGAGATAATCGACATGTCAGCATGGGTTCAGAAAAGTGGCTGGATATTGAGGTCTGGAACTCAACCCCAGAATGCTTTAATGTTCTGAAGTCACGTGGTTACAGAATAGCTACTACACATCTGGGAAAGAATACAGCTTCTATACATGACATAGATTGGTCATGCCCAACTGCCATTGTTGTTGGTAACGAGAACAGGGGAATTAGTGAAGAAGCTTTAGAGTTGTCAGACTTGCACTGCAGCATTCCTATGAACGGCATGGTTGATTCTTTCAATGTTTCAGTTGCTGCTGGGATACTGATGCATCAAGCCGTTTTTGACAGAACACTACGCCTGGGGTCTCATGGGGATCTAACATCAGAAGAAAGTCAAATCTTACTAGCAGAATTTTTTCTTCGTCATAGCAAGAGTGCAATCAGCATGGCCTACGAGTATGCTAAAAGGAAGTTGTCCAACCCAACGCCGAAGCTTTGATTCATCACCTTGCAAAGTTTCAATATTTAGAGGCAGGGGCATTTTAGGTAGTAGAAATGTAGAATTGTAATCAATTTGCTAGTAGAATGAAGGATAAGATAGGTAGTAGAAATTATTTTTTTGCGAACGATTTCTTATAATTGCTAAAAGCAAAAATTAATTCCCCATTACATTGGTTAAAAAACTATTTCCGATAATACTATCCAGGTAGAGCGGTTTATAACG

Coding sequence (CDS)

ATGAACATCTCCCAAACCCTAACTCGAACTTCACTCTTATCTTCTCATTTCTCCATTCTTAATCTCCCAAAGCTTCCTTTTCCTCACGGGTTCCAGCAAAATTGCCGAAGAATACGATGCATACCAGAGCTCTCAATCCCAGAATCCATCGCAATTTCCGAACCCTTAATCCCCAACTCAACCGAAGATTCGGCGGAAGACACAGTGGAGCAATTACTCTCTCCCCAGGACAACAAAATCGTCTCTAAAATGATGAAAATGGAGAGAAAACCAAGTGGTGGTGCTGTTCTACGGGATAATAATGGCCGTTGGTTTCCGTACCTTGATAAATTTAAGGTGAATGATGTTTATTTGAGTAGTGCTGAAGTATTGGAGGCGATTGATCCTCTTATATTGGATGTGAGGAAAGAGAGGTTCAGGAATGTGGTGAGGAATCGGAGTTTTGGTGTTTGTCTTGTTGTTGAAGGATTGAGCGATTACGGAAACGTTTCGGCTGTGTGTCGGTCTGCAGATGCTCTTGGCTTGCAGTCTGTCCATGCTGTTTCTTGCGATAGCTCGAAAAGGTTTAGAGATAATCGACATGTCAGCATGGGTTCAGAAAAGTGGCTGGATATTGAGGTCTGGAACTCAACCCCAGAATGCTTTAATGTTCTGAAGTCACGTGGTTACAGAATAGCTACTACACATCTGGGAAAGAATACAGCTTCTATACATGACATAGATTGGTCATGCCCAACTGCCATTGTTGTTGGTAACGAGAACAGGGGAATTAGTGAAGAAGCTTTAGAGTTGTCAGACTTGCACTGCAGCATTCCTATGAACGGCATGGTTGATTCTTTCAATGTTTCAGTTGCTGCTGGGATACTGATGCATCAAGCCGTTTTTGACAGAACACTACGCCTGGGGTCTCATGGGGATCTAACATCAGAAGAAAGTCAAATCTTACTAGCAGAATTTTTTCTTCGTCATAGCAAGAGTGCAATCAGCATGGCCTACGAGTATGCTAAAAGGAAGTTGTCCAACCCAACGCCGAAGCTTTGA

Protein sequence

MNISQTLTRTSLLSSHFSILNLPKLPFPHGFQQNCRRIRCIPELSIPESIAISEPLIPNSTEDSAEDTVEQLLSPQDNKIVSKMMKMERKPSGGAVLRDNNGRWFPYLDKFKVNDVYLSSAEVLEAIDPLILDVRKERFRNVVRNRSFGVCLVVEGLSDYGNVSAVCRSADALGLQSVHAVSCDSSKRFRDNRHVSMGSEKWLDIEVWNSTPECFNVLKSRGYRIATTHLGKNTASIHDIDWSCPTAIVVGNENRGISEEALELSDLHCSIPMNGMVDSFNVSVAAGILMHQAVFDRTLRLGSHGDLTSEESQILLAEFFLRHSKSAISMAYEYAKRKLSNPTPKL

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo06488.1	Spo06488.1	mRNA

Homology

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BLAST of Spo06488.1 vs. NCBI nr
Match: gi|902153937|gb|KNA05761.1| (hypothetical protein SOVF_187440 [Spinacia oleracea])

HSP 1 Score: 689.5 bits (1778), Expect = 3.000e-195
Identity = 344/346 (99.42%), Postives = 345/346 (99.71%), Query Frame = 1


		  
Query: 1   MNISQTLTRTSLLSSHFSILNLPKLPFPHGFQQNCRRIRCIPELSIPESIAISEPLIPNS 60
           MNISQTLTRTSLLSSHFSILNLPKLP PHGFQQNCRRIRCIPELSIPESIAISEPLIPNS
Sbjct: 1   MNISQTLTRTSLLSSHFSILNLPKLPSPHGFQQNCRRIRCIPELSIPESIAISEPLIPNS 60

Query: 61  TEDSAEDTVEQLLSPQDNKIVSKMMKMERKPSGGAVLRDNNGRWFPYLDKFKVNDVYLSS 120
           TEDSAEDTVEQLLSPQDNKIVSKMMKMERKPSGGAVLRDNNGRWFPYLDKFKVNDVYLSS
Sbjct: 61  TEDSAEDTVEQLLSPQDNKIVSKMMKMERKPSGGAVLRDNNGRWFPYLDKFKVNDVYLSS 120

Query: 121 AEVLEAIDPLILDVRKERFRNVVRNRSFGVCLVVEGLSDYGNVSAVCRSADALGLQSVHA 180
           AEVLEAIDPLILDVRKERFRNVVRNRSFGVCLVVEGLSDYGNVSAVCRSADALGLQSVHA
Sbjct: 121 AEVLEAIDPLILDVRKERFRNVVRNRSFGVCLVVEGLSDYGNVSAVCRSADALGLQSVHA 180

Query: 181 VSCDSSKRFRDNRHVSMGSEKWLDIEVWNSTPECFNVLKSRGYRIATTHLGKNTASIHDI 240
           VSCDSSKRFRDNRHVSMGSEKWLDIEVWNSTPECFNVLKSRGYRIATTHLGKNTASIHDI
Sbjct: 181 VSCDSSKRFRDNRHVSMGSEKWLDIEVWNSTPECFNVLKSRGYRIATTHLGKNTASIHDI 240

Query: 241 DWSCPTAIVVGNENRGISEEALELSDLHCSIPMNGMVDSFNVSVAAGILMHQAVFDRTLR 300
           DWSCPTAIVVGNENRGISEEALELSDLHCSIPMNGMVDSFNVSVAAGILMHQAVFDRTLR
Sbjct: 241 DWSCPTAIVVGNENRGISEEALELSDLHCSIPMNGMVDSFNVSVAAGILMHQAVFDRTLR 300

Query: 301 LGSHGDLTSEESQILLAEFFLRHSKSAISMAYEYAKRKLSNPTPKL 347
           LGSHGDLTSEESQILLAEFFLRHSKSAI+MAYEYAKRKLSNPTPKL
Sbjct: 301 LGSHGDLTSEESQILLAEFFLRHSKSAITMAYEYAKRKLSNPTPKL 346

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BLAST of Spo06488.1 vs. NCBI nr
Match: gi|731319345|ref|XP_010670207.1| (PREDICTED: uncharacterized protein LOC104887293 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 528.5 bits (1360), Expect = 8.900e-147
Identity = 270/351 (76.92%), Postives = 301/351 (85.75%), Query Frame = 1


		  
Query: 1   MNISQTLTRTSLLSSHFSILNLPKLP-FPH----GFQQNCRRIRCIPELSIPESIAISEP 60
           MN+  TL RTSLLSSHFS+L+LPKL  FP     GF QN RRIRCIPELSIPES AISEP
Sbjct: 1   MNLYLTLARTSLLSSHFSLLHLPKLSTFPLISNIGFHQNSRRIRCIPELSIPESAAISEP 60

Query: 61  LIPNSTEDSAEDTVEQLLSPQDNKIVSKMMKMERKPSGGAVLRDNNGRWFPYLDKFKVND 120
           L    +E+S +DTVE+LLSP++   V  +MKMERK      + DN+GRWFPYLDKF  N 
Sbjct: 61  LNFEFSEESEKDTVEELLSPKNKDKVPNLMKMERK---SVCMPDNHGRWFPYLDKFSANG 120

Query: 121 VYLSSAEVLEAIDPLILDVRKERFRNVVRNRSFGVCLVVEGLSDYGNVSAVCRSADALGL 180
           VYL+S E+LEA++PLILDVRKE+FRNVV++RS+GVCLVVEGLSD+GNVSA  RSADALG 
Sbjct: 121 VYLNSGEILEAVNPLILDVRKEKFRNVVKHRSYGVCLVVEGLSDFGNVSAALRSADALGF 180

Query: 181 QSVHAVSCDSSKRFRDNRHVSMGSEKWLDIEVWNSTPECFNVLKSRGYRIATTHLGKNTA 240
           QSVH VSCDSSKR+RDNRHVSMGSEKWLDIEVWNST ECF+VLKSRGYRIA+THLGKNT 
Sbjct: 181 QSVHVVSCDSSKRYRDNRHVSMGSEKWLDIEVWNSTRECFDVLKSRGYRIASTHLGKNTV 240

Query: 241 SIHDIDWSCPTAIVVGNENRGISEEALELSDLHCSIPMNGMVDSFNVSVAAGILMHQAVF 300
           S++D+DWSCPTA+VVGNEN+GISEEALELSDLHCSIPMNGMVDSFNVSVAAGILMH AV 
Sbjct: 241 SVYDMDWSCPTAVVVGNENKGISEEALELSDLHCSIPMNGMVDSFNVSVAAGILMHHAVC 300

Query: 301 DRTLRLGSHGDLTSEESQILLAEFFLRHSKSAISMAYEYAKRKLSNPTPKL 347
           DRT RLGSHGDLTS+ESQILLAEFFLRHSKSAIS A EYA RK S+   KL
Sbjct: 301 DRTSRLGSHGDLTSDESQILLAEFFLRHSKSAISTACEYATRKSSSTMSKL 348

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BLAST of Spo06488.1 vs. NCBI nr
Match: gi|595938113|ref|XP_007215633.1| (hypothetical protein PRUPE_ppa008118mg [Prunus persica])

HSP 1 Score: 425.6 bits (1093), Expect = 8.100e-116
Identity = 229/354 (64.69%), Postives = 268/354 (75.71%), Query Frame = 1


		  
Query: 1   MNISQTLTRTSLLSSHFSI-LNLPKLPFPHGFQQNCRRIRCIPELSIPESIA--ISEPLI 60
           M+  +TL RTSL S   S+  + P +P  H        +R  P LS  +  A    E   
Sbjct: 1   MSACKTLVRTSLSSISSSLRASGPPIPLLHS-----PSLRFSPLLSPNQEAADFTDEAQF 60

Query: 61  PNST----EDSAEDTVEQLLSPQDNKIVSKMMKMERKPSGGAVLRDNNGRWFPYLDKFKV 120
            +ST    E   +DTVEQLL  +++  V ++MKMER P          GRWFPYLDKF  
Sbjct: 61  TDSTLEPPEIPTQDTVEQLLKQKND--VGRLMKMERSPESA---HQRGGRWFPYLDKFSC 120

Query: 121 N-DVYLSSAEVLEAIDPLILDVRKERFRNVVRNRSFGVCLVVEGLSDYGNVSAVCRSADA 180
             D YL+SAEVL+A+DP ILDVRKERFR VV+NRS+ VCLVVEGL D+GNVSA  RSADA
Sbjct: 121 GEDAYLNSAEVLDALDPYILDVRKERFRRVVKNRSYSVCLVVEGLGDFGNVSAAFRSADA 180

Query: 181 LGLQSVHAVSCDSSKRFRDNRHVSMGSEKWLDIEVWNSTPECFNVLKSRGYRIATTHLGK 240
           LG QSVH +SCDSSKR+RDNRHVSMG+EKWLDIE+W+STPECF VLKSRGYRIATTH+G 
Sbjct: 181 LGFQSVHVLSCDSSKRYRDNRHVSMGAEKWLDIELWDSTPECFEVLKSRGYRIATTHVGM 240

Query: 241 NTASIHDIDWSCPTAIVVGNENRGISEEALELSDLHCSIPMNGMVDSFNVSVAAGILMHQ 300
           +  S++D+DWSCPTAIVVGNENRGIS+EAL+LSDLHCSIPM GMVDSFNVSVAAGILMH 
Sbjct: 241 DAVSVYDMDWSCPTAIVVGNENRGISDEALDLSDLHCSIPMKGMVDSFNVSVAAGILMHH 300

Query: 301 AVFDRTLRLGSHGDLTSEESQILLAEFFLRHSKSAISMAYEYAKRKLSNPTPKL 347
           AV DRT RLG HGDLT EESQILLAEF LRHSKS++S+A+EYAKRK +  TP++
Sbjct: 301 AVCDRTSRLGCHGDLTFEESQILLAEFSLRHSKSSMSIAHEYAKRKAAVLTPRI 344

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BLAST of Spo06488.1 vs. NCBI nr
Match: gi|296082972|emb|CBI22273.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 420.2 bits (1079), Expect = 3.400e-114
Identity = 226/373 (60.59%), Postives = 275/373 (73.73%), Query Frame = 1


		  
Query: 1   MNISQTLTRTSLLSSHFSIL----NLPKLPFPH--GFQQNCRRIRCIPELSIPESIAI-- 60
           M+  +TL R S+ S  FS++    N   +P P+   F      +R    LS   SI++  
Sbjct: 1   MSACKTLVRISISSLEFSLVCNQRNFSFIPLPNHPSFSPISSSLRFASLLSPASSISLGL 60

Query: 61  ------SEPLI----------PNSTEDSAEDTVEQLLSPQDNKIVSKMMKMERKP---SG 120
                 S P +           +  +DS +D VE LL+  D+  V ++MKMER+     G
Sbjct: 61  TRHKLHSRPYVHVAESVGVETTDLEDDSNKDIVEHLLTNTDD--VGRLMKMERRSMTGDG 120

Query: 121 GAVLRDNNGRWFPYLDKFKVNDVYLSSAEVLEAIDPLILDVRKERFRNVVRNRSFGVCLV 180
           G +++    RWFPYLDKFK    +LSS+E+LEA+DP I++VRKERFRNVV++RS+ VCLV
Sbjct: 121 GELIQSK--RWFPYLDKFKTGTTFLSSSEILEAMDPYIMEVRKERFRNVVKSRSYSVCLV 180

Query: 181 VEGLSDYGNVSAVCRSADALGLQSVHAVSCDSSKRFRDNRHVSMGSEKWLDIEVWNSTPE 240
           VEGL D+GNVSA  RSADALG QSVH VSCDSSKR++DNRHVSMG+EKWLDIE+WNST E
Sbjct: 181 VEGLCDFGNVSAAFRSADALGFQSVHVVSCDSSKRYKDNRHVSMGAEKWLDIELWNSTQE 240

Query: 241 CFNVLKSRGYRIATTHLGKNTASIHDIDWSCPTAIVVGNENRGISEEALELSDLHCSIPM 300
           CF VLKSRGYRIATTH+G +  SI+D+DW+CPTAIVVGNENRGIS+EALELSDLHCSIPM
Sbjct: 241 CFEVLKSRGYRIATTHVGMDAVSIYDMDWTCPTAIVVGNENRGISDEALELSDLHCSIPM 300

Query: 301 NGMVDSFNVSVAAGILMHQAVFDRTLRLGSHGDLTSEESQILLAEFFLRHSKSAISMAYE 347
            GMVDSFNVSVAAGILMH AV DRT RLGSHGDL+ EES+ILLAEF LRHSKSA S+A+E
Sbjct: 301 KGMVDSFNVSVAAGILMHHAVCDRTSRLGSHGDLSLEESRILLAEFSLRHSKSANSIAHE 360

[Close]

BLAST of Spo06488.1 vs. NCBI nr
Match: gi|731419694|ref|XP_010661108.1| (PREDICTED: uncharacterized protein LOC100259259 [Vitis vinifera])

HSP 1 Score: 420.2 bits (1079), Expect = 3.400e-114
Identity = 226/373 (60.59%), Postives = 275/373 (73.73%), Query Frame = 1


		  
Query: 1   MNISQTLTRTSLLSSHFSIL----NLPKLPFPH--GFQQNCRRIRCIPELSIPESIAI-- 60
           M+  +TL R S+ S  FS++    N   +P P+   F      +R    LS   SI++  
Sbjct: 26  MSACKTLVRISISSLEFSLVCNQRNFSFIPLPNHPSFSPISSSLRFASLLSPASSISLGL 85

Query: 61  ------SEPLI----------PNSTEDSAEDTVEQLLSPQDNKIVSKMMKMERKP---SG 120
                 S P +           +  +DS +D VE LL+  D+  V ++MKMER+     G
Sbjct: 86  TRHKLHSRPYVHVAESVGVETTDLEDDSNKDIVEHLLTNTDD--VGRLMKMERRSMTGDG 145

Query: 121 GAVLRDNNGRWFPYLDKFKVNDVYLSSAEVLEAIDPLILDVRKERFRNVVRNRSFGVCLV 180
           G +++    RWFPYLDKFK    +LSS+E+LEA+DP I++VRKERFRNVV++RS+ VCLV
Sbjct: 146 GELIQSK--RWFPYLDKFKTGTTFLSSSEILEAMDPYIMEVRKERFRNVVKSRSYSVCLV 205

Query: 181 VEGLSDYGNVSAVCRSADALGLQSVHAVSCDSSKRFRDNRHVSMGSEKWLDIEVWNSTPE 240
           VEGL D+GNVSA  RSADALG QSVH VSCDSSKR++DNRHVSMG+EKWLDIE+WNST E
Sbjct: 206 VEGLCDFGNVSAAFRSADALGFQSVHVVSCDSSKRYKDNRHVSMGAEKWLDIELWNSTQE 265

Query: 241 CFNVLKSRGYRIATTHLGKNTASIHDIDWSCPTAIVVGNENRGISEEALELSDLHCSIPM 300
           CF VLKSRGYRIATTH+G +  SI+D+DW+CPTAIVVGNENRGIS+EALELSDLHCSIPM
Sbjct: 266 CFEVLKSRGYRIATTHVGMDAVSIYDMDWTCPTAIVVGNENRGISDEALELSDLHCSIPM 325

Query: 301 NGMVDSFNVSVAAGILMHQAVFDRTLRLGSHGDLTSEESQILLAEFFLRHSKSAISMAYE 347
            GMVDSFNVSVAAGILMH AV DRT RLGSHGDL+ EES+ILLAEF LRHSKSA S+A+E
Sbjct: 326 KGMVDSFNVSVAAGILMHHAVCDRTSRLGSHGDLSLEESRILLAEFSLRHSKSANSIAHE 385

[Close]

BLAST of Spo06488.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QGS6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_187440 PE=4 SV=1)

HSP 1 Score: 689.5 bits (1778), Expect = 2.100e-195
Identity = 344/346 (99.42%), Postives = 345/346 (99.71%), Query Frame = 1


		  
Query: 1   MNISQTLTRTSLLSSHFSILNLPKLPFPHGFQQNCRRIRCIPELSIPESIAISEPLIPNS 60
           MNISQTLTRTSLLSSHFSILNLPKLP PHGFQQNCRRIRCIPELSIPESIAISEPLIPNS
Sbjct: 1   MNISQTLTRTSLLSSHFSILNLPKLPSPHGFQQNCRRIRCIPELSIPESIAISEPLIPNS 60

Query: 61  TEDSAEDTVEQLLSPQDNKIVSKMMKMERKPSGGAVLRDNNGRWFPYLDKFKVNDVYLSS 120
           TEDSAEDTVEQLLSPQDNKIVSKMMKMERKPSGGAVLRDNNGRWFPYLDKFKVNDVYLSS
Sbjct: 61  TEDSAEDTVEQLLSPQDNKIVSKMMKMERKPSGGAVLRDNNGRWFPYLDKFKVNDVYLSS 120

Query: 121 AEVLEAIDPLILDVRKERFRNVVRNRSFGVCLVVEGLSDYGNVSAVCRSADALGLQSVHA 180
           AEVLEAIDPLILDVRKERFRNVVRNRSFGVCLVVEGLSDYGNVSAVCRSADALGLQSVHA
Sbjct: 121 AEVLEAIDPLILDVRKERFRNVVRNRSFGVCLVVEGLSDYGNVSAVCRSADALGLQSVHA 180

Query: 181 VSCDSSKRFRDNRHVSMGSEKWLDIEVWNSTPECFNVLKSRGYRIATTHLGKNTASIHDI 240
           VSCDSSKRFRDNRHVSMGSEKWLDIEVWNSTPECFNVLKSRGYRIATTHLGKNTASIHDI
Sbjct: 181 VSCDSSKRFRDNRHVSMGSEKWLDIEVWNSTPECFNVLKSRGYRIATTHLGKNTASIHDI 240

Query: 241 DWSCPTAIVVGNENRGISEEALELSDLHCSIPMNGMVDSFNVSVAAGILMHQAVFDRTLR 300
           DWSCPTAIVVGNENRGISEEALELSDLHCSIPMNGMVDSFNVSVAAGILMHQAVFDRTLR
Sbjct: 241 DWSCPTAIVVGNENRGISEEALELSDLHCSIPMNGMVDSFNVSVAAGILMHQAVFDRTLR 300

Query: 301 LGSHGDLTSEESQILLAEFFLRHSKSAISMAYEYAKRKLSNPTPKL 347
           LGSHGDLTSEESQILLAEFFLRHSKSAI+MAYEYAKRKLSNPTPKL
Sbjct: 301 LGSHGDLTSEESQILLAEFFLRHSKSAITMAYEYAKRKLSNPTPKL 346

[Close]

BLAST of Spo06488.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CYU2_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g039990 PE=4 SV=1)

HSP 1 Score: 528.5 bits (1360), Expect = 6.200e-147
Identity = 270/351 (76.92%), Postives = 301/351 (85.75%), Query Frame = 1


		  
Query: 1   MNISQTLTRTSLLSSHFSILNLPKLP-FPH----GFQQNCRRIRCIPELSIPESIAISEP 60
           MN+  TL RTSLLSSHFS+L+LPKL  FP     GF QN RRIRCIPELSIPES AISEP
Sbjct: 1   MNLYLTLARTSLLSSHFSLLHLPKLSTFPLISNIGFHQNSRRIRCIPELSIPESAAISEP 60

Query: 61  LIPNSTEDSAEDTVEQLLSPQDNKIVSKMMKMERKPSGGAVLRDNNGRWFPYLDKFKVND 120
           L    +E+S +DTVE+LLSP++   V  +MKMERK      + DN+GRWFPYLDKF  N 
Sbjct: 61  LNFEFSEESEKDTVEELLSPKNKDKVPNLMKMERK---SVCMPDNHGRWFPYLDKFSANG 120

Query: 121 VYLSSAEVLEAIDPLILDVRKERFRNVVRNRSFGVCLVVEGLSDYGNVSAVCRSADALGL 180
           VYL+S E+LEA++PLILDVRKE+FRNVV++RS+GVCLVVEGLSD+GNVSA  RSADALG 
Sbjct: 121 VYLNSGEILEAVNPLILDVRKEKFRNVVKHRSYGVCLVVEGLSDFGNVSAALRSADALGF 180

Query: 181 QSVHAVSCDSSKRFRDNRHVSMGSEKWLDIEVWNSTPECFNVLKSRGYRIATTHLGKNTA 240
           QSVH VSCDSSKR+RDNRHVSMGSEKWLDIEVWNST ECF+VLKSRGYRIA+THLGKNT 
Sbjct: 181 QSVHVVSCDSSKRYRDNRHVSMGSEKWLDIEVWNSTRECFDVLKSRGYRIASTHLGKNTV 240

Query: 241 SIHDIDWSCPTAIVVGNENRGISEEALELSDLHCSIPMNGMVDSFNVSVAAGILMHQAVF 300
           S++D+DWSCPTA+VVGNEN+GISEEALELSDLHCSIPMNGMVDSFNVSVAAGILMH AV 
Sbjct: 241 SVYDMDWSCPTAVVVGNENKGISEEALELSDLHCSIPMNGMVDSFNVSVAAGILMHHAVC 300

Query: 301 DRTLRLGSHGDLTSEESQILLAEFFLRHSKSAISMAYEYAKRKLSNPTPKL 347
           DRT RLGSHGDLTS+ESQILLAEFFLRHSKSAIS A EYA RK S+   KL
Sbjct: 301 DRTSRLGSHGDLTSDESQILLAEFFLRHSKSAISTACEYATRKSSSTMSKL 348

[Close]

BLAST of Spo06488.1 vs. UniProtKB/TrEMBL
Match: M5WSN7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008118mg PE=4 SV=1)

HSP 1 Score: 425.6 bits (1093), Expect = 5.700e-116
Identity = 229/354 (64.69%), Postives = 268/354 (75.71%), Query Frame = 1


		  
Query: 1   MNISQTLTRTSLLSSHFSI-LNLPKLPFPHGFQQNCRRIRCIPELSIPESIA--ISEPLI 60
           M+  +TL RTSL S   S+  + P +P  H        +R  P LS  +  A    E   
Sbjct: 1   MSACKTLVRTSLSSISSSLRASGPPIPLLHS-----PSLRFSPLLSPNQEAADFTDEAQF 60

Query: 61  PNST----EDSAEDTVEQLLSPQDNKIVSKMMKMERKPSGGAVLRDNNGRWFPYLDKFKV 120
            +ST    E   +DTVEQLL  +++  V ++MKMER P          GRWFPYLDKF  
Sbjct: 61  TDSTLEPPEIPTQDTVEQLLKQKND--VGRLMKMERSPESA---HQRGGRWFPYLDKFSC 120

Query: 121 N-DVYLSSAEVLEAIDPLILDVRKERFRNVVRNRSFGVCLVVEGLSDYGNVSAVCRSADA 180
             D YL+SAEVL+A+DP ILDVRKERFR VV+NRS+ VCLVVEGL D+GNVSA  RSADA
Sbjct: 121 GEDAYLNSAEVLDALDPYILDVRKERFRRVVKNRSYSVCLVVEGLGDFGNVSAAFRSADA 180

Query: 181 LGLQSVHAVSCDSSKRFRDNRHVSMGSEKWLDIEVWNSTPECFNVLKSRGYRIATTHLGK 240
           LG QSVH +SCDSSKR+RDNRHVSMG+EKWLDIE+W+STPECF VLKSRGYRIATTH+G 
Sbjct: 181 LGFQSVHVLSCDSSKRYRDNRHVSMGAEKWLDIELWDSTPECFEVLKSRGYRIATTHVGM 240

Query: 241 NTASIHDIDWSCPTAIVVGNENRGISEEALELSDLHCSIPMNGMVDSFNVSVAAGILMHQ 300
           +  S++D+DWSCPTAIVVGNENRGIS+EAL+LSDLHCSIPM GMVDSFNVSVAAGILMH 
Sbjct: 241 DAVSVYDMDWSCPTAIVVGNENRGISDEALDLSDLHCSIPMKGMVDSFNVSVAAGILMHH 300

Query: 301 AVFDRTLRLGSHGDLTSEESQILLAEFFLRHSKSAISMAYEYAKRKLSNPTPKL 347
           AV DRT RLG HGDLT EESQILLAEF LRHSKS++S+A+EYAKRK +  TP++
Sbjct: 301 AVCDRTSRLGCHGDLTFEESQILLAEFSLRHSKSSMSIAHEYAKRKAAVLTPRI 344

[Close]

BLAST of Spo06488.1 vs. UniProtKB/TrEMBL
Match: D7SXH6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0108g01380 PE=4 SV=1)

HSP 1 Score: 420.2 bits (1079), Expect = 2.400e-114
Identity = 226/373 (60.59%), Postives = 275/373 (73.73%), Query Frame = 1


		  
Query: 1   MNISQTLTRTSLLSSHFSIL----NLPKLPFPH--GFQQNCRRIRCIPELSIPESIAI-- 60
           M+  +TL R S+ S  FS++    N   +P P+   F      +R    LS   SI++  
Sbjct: 1   MSACKTLVRISISSLEFSLVCNQRNFSFIPLPNHPSFSPISSSLRFASLLSPASSISLGL 60

Query: 61  ------SEPLI----------PNSTEDSAEDTVEQLLSPQDNKIVSKMMKMERKP---SG 120
                 S P +           +  +DS +D VE LL+  D+  V ++MKMER+     G
Sbjct: 61  TRHKLHSRPYVHVAESVGVETTDLEDDSNKDIVEHLLTNTDD--VGRLMKMERRSMTGDG 120

Query: 121 GAVLRDNNGRWFPYLDKFKVNDVYLSSAEVLEAIDPLILDVRKERFRNVVRNRSFGVCLV 180
           G +++    RWFPYLDKFK    +LSS+E+LEA+DP I++VRKERFRNVV++RS+ VCLV
Sbjct: 121 GELIQSK--RWFPYLDKFKTGTTFLSSSEILEAMDPYIMEVRKERFRNVVKSRSYSVCLV 180

Query: 181 VEGLSDYGNVSAVCRSADALGLQSVHAVSCDSSKRFRDNRHVSMGSEKWLDIEVWNSTPE 240
           VEGL D+GNVSA  RSADALG QSVH VSCDSSKR++DNRHVSMG+EKWLDIE+WNST E
Sbjct: 181 VEGLCDFGNVSAAFRSADALGFQSVHVVSCDSSKRYKDNRHVSMGAEKWLDIELWNSTQE 240

Query: 241 CFNVLKSRGYRIATTHLGKNTASIHDIDWSCPTAIVVGNENRGISEEALELSDLHCSIPM 300
           CF VLKSRGYRIATTH+G +  SI+D+DW+CPTAIVVGNENRGIS+EALELSDLHCSIPM
Sbjct: 241 CFEVLKSRGYRIATTHVGMDAVSIYDMDWTCPTAIVVGNENRGISDEALELSDLHCSIPM 300

Query: 301 NGMVDSFNVSVAAGILMHQAVFDRTLRLGSHGDLTSEESQILLAEFFLRHSKSAISMAYE 347
            GMVDSFNVSVAAGILMH AV DRT RLGSHGDL+ EES+ILLAEF LRHSKSA S+A+E
Sbjct: 301 KGMVDSFNVSVAAGILMHHAVCDRTSRLGSHGDLSLEESRILLAEFSLRHSKSANSIAHE 360

[Close]

BLAST of Spo06488.1 vs. UniProtKB/TrEMBL
Match: B9T3S9_RICCO (rRNA methylase, putative OS=Ricinus communis GN=RCOM_0169110 PE=4 SV=1)

HSP 1 Score: 419.5 bits (1077), Expect = 4.100e-114
Identity = 209/287 (72.82%), Postives = 240/287 (83.62%), Query Frame = 1


		  
Query: 60  STEDSAEDTVEQLLSPQDNKIVSKMMKMERKPSGGAVLRDNNGRWFPYLDKFKVNDVYLS 119
           S +DS  +TVE LLS +D+  V ++MKMER+P        +  RWFPYLD++K     LS
Sbjct: 54  SADDSKNETVEHLLSNRDD--VLRLMKMERRPDA----EKSGSRWFPYLDRYKCGSGELS 113

Query: 120 SAEVLEAIDPLILDVRKERFRNVVRNRSFGVCLVVEGLSDYGNVSAVCRSADALGLQSVH 179
            +EVLEA+ P I++ RKERF NVV+NRS+ VCLVVEGLSD+GNVSA  RSADALG QSVH
Sbjct: 114 GSEVLEAVGPYIMEDRKERFANVVKNRSYSVCLVVEGLSDFGNVSAAFRSADALGFQSVH 173

Query: 180 AVSCDSSKRFRDNRHVSMGSEKWLDIEVWNSTPECFNVLKSRGYRIATTHLGKNTASIHD 239
            VSCDSSKR+RDNRHVSMG+EKWLDIE+W+ST ECF VLKSRGYRIATTH+G +  SI+D
Sbjct: 174 VVSCDSSKRYRDNRHVSMGAEKWLDIELWDSTQECFEVLKSRGYRIATTHVGMDAVSIYD 233

Query: 240 IDWSCPTAIVVGNENRGISEEALELSDLHCSIPMNGMVDSFNVSVAAGILMHQAVFDRTL 299
           +DWSCPTAIVVGNENRGIS+EALELSDLHCSIPM GMVDSFNVSVAAGILMHQAV DRT 
Sbjct: 234 MDWSCPTAIVVGNENRGISDEALELSDLHCSIPMKGMVDSFNVSVAAGILMHQAVCDRTS 293

Query: 300 RLGSHGDLTSEESQILLAEFFLRHSKSAISMAYEYAKRKLSNPTPKL 347
           RLGSHGDLT  ES++LLAEF LRHSKSAIS+A+EYAKRK + P PKL
Sbjct: 294 RLGSHGDLTLAESRVLLAEFSLRHSKSAISIAHEYAKRKAATPMPKL 334

[Close]

BLAST of Spo06488.1 vs. ExPASy Swiss-Prot
Match: TRMH_AQUAE (tRNA (guanosine(18)-2'-O)-methyltransferase OS=Aquifex aeolicus (strain VF5) GN=trmH PE=1 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 3.900e-25
Identity = 63/191 (32.98%), Postives = 112/191 (58.64%), Query Frame = 1


		  
Query: 130 LILDVRKERFRNVVRNRSFGVCLVVEGLSDYGNVSAVCRSADALGLQSVHAVSCDSSKRF 189
           L+L+ R +R R V+  R   + +  + + +  N SA+ R+ DA+G+  ++    +  K+ 
Sbjct: 6   LVLEKRLKRLREVLEKRQKDLIVFADNVKNEHNFSAIVRTCDAVGVLYLYYYHAEG-KKA 65

Query: 190 RDNRHVSMGSEKWLDIEVWNSTPECFNVLKSRGYRIATTHLGKNTASIHDIDWSCPTAIV 249
           + N  ++ GS KW+ IE  ++  +     K+RG++I  T L K + +  ++D++ PT +V
Sbjct: 66  KINEGITQGSHKWVFIEKVDNPVQKLLEFKNRGFQIVATWLSKESVNFREVDYTKPTVLV 125

Query: 250 VGNENRGISEEALELSDLHCSIPMNGMVDSFNVSVAAGILMHQAVFDRTLR-LGSHGDLT 309
           VGNE +G+S E +E++D    IPM GM  S NVSVA GI++++A   R  + + S   L+
Sbjct: 126 VGNELQGVSPEIVEIADKKIVIPMYGMAQSLNVSVATGIILYEAQRQREEKGMYSRPSLS 185

Query: 310 SEESQILLAEF 320
            EE Q +L ++
Sbjct: 186 EEEIQKILKKW 195

[Close]

BLAST of Spo06488.1 vs. ExPASy Swiss-Prot
Match: TRMH_ECO57 (tRNA (guanosine(18)-2'-O)-methyltransferase OS=Escherichia coli O157:H7 GN=trmH PE=3 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 4.700e-23
Identity = 66/187 (35.29%), Postives = 100/187 (53.48%), Query Frame = 1


		  
Query: 135 RKERFRNVVRNRSFGVCLVVEGLSDYGNVSAVCRSADALGLQSVHAVSCDSSKRFRDNRH 194
           R  R   ++  R   + + +E +    NVSA+ R+ADA+G+  VHAV   S  R R    
Sbjct: 5   RYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGS--RMRTMAS 64

Query: 195 VSMGSEKWLDIEVWNSTPECFNVLKSRGYRIATTHLGKNTASIHDIDWSCPTAIVVGNEN 254
            + GS  W+ ++   +  +    LK +G +I  THL  N     +ID++ PT I++G E 
Sbjct: 65  AAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEK 124

Query: 255 RGISEEALELSDLHCSIPMNGMVDSFNVSVAAGILMHQAVFDRT---LRLGSHGDLTSEE 314
            GI++EAL L+D    IPM GMV S NVSVA+ +++++A   R    + L  +  L   E
Sbjct: 125 TGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPEAE 184

Query: 315 SQILLAE 319
            Q LL E
Sbjct: 185 QQRLLFE 189

[Close]

BLAST of Spo06488.1 vs. ExPASy Swiss-Prot
Match: TRMH_ECOLI (tRNA (guanosine(18)-2'-O)-methyltransferase OS=Escherichia coli (strain K12) GN=trmH PE=1 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 4.700e-23
Identity = 66/187 (35.29%), Postives = 100/187 (53.48%), Query Frame = 1


		  
Query: 135 RKERFRNVVRNRSFGVCLVVEGLSDYGNVSAVCRSADALGLQSVHAVSCDSSKRFRDNRH 194
           R  R   ++  R   + + +E +    NVSA+ R+ADA+G+  VHAV   S  R R    
Sbjct: 5   RYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGS--RMRTMAS 64

Query: 195 VSMGSEKWLDIEVWNSTPECFNVLKSRGYRIATTHLGKNTASIHDIDWSCPTAIVVGNEN 254
            + GS  W+ ++   +  +    LK +G +I  THL  N     +ID++ PT I++G E 
Sbjct: 65  AAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEK 124

Query: 255 RGISEEALELSDLHCSIPMNGMVDSFNVSVAAGILMHQAVFDRT---LRLGSHGDLTSEE 314
            GI++EAL L+D    IPM GMV S NVSVA+ +++++A   R    + L  +  L   E
Sbjct: 125 TGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPEAE 184

Query: 315 SQILLAE 319
            Q LL E
Sbjct: 185 QQRLLFE 189

[Close]

BLAST of Spo06488.1 vs. ExPASy Swiss-Prot
Match: TRMH_SHIFL (tRNA (guanosine(18)-2'-O)-methyltransferase OS=Shigella flexneri GN=trmH PE=3 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 4.700e-23
Identity = 66/187 (35.29%), Postives = 100/187 (53.48%), Query Frame = 1


		  
Query: 135 RKERFRNVVRNRSFGVCLVVEGLSDYGNVSAVCRSADALGLQSVHAVSCDSSKRFRDNRH 194
           R  R   ++  R   + + +E +    NVSA+ R+ADA+G+  VHAV   S  R R    
Sbjct: 5   RYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGS--RMRTMAS 64

Query: 195 VSMGSEKWLDIEVWNSTPECFNVLKSRGYRIATTHLGKNTASIHDIDWSCPTAIVVGNEN 254
            + GS  W+ ++   +  +    LK +G +I  THL  N     +ID++ PT I++G E 
Sbjct: 65  AAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEK 124

Query: 255 RGISEEALELSDLHCSIPMNGMVDSFNVSVAAGILMHQAVFDRT---LRLGSHGDLTSEE 314
            GI++EAL L+D    IPM GMV S NVSVA+ +++++A   R    + L  +  L   E
Sbjct: 125 TGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPEAE 184

Query: 315 SQILLAE 319
            Q LL E
Sbjct: 185 QQRLLFE 189

[Close]

BLAST of Spo06488.1 vs. ExPASy Swiss-Prot
Match: TRMH_THET2 (tRNA (guanosine(18)-2'-O)-methyltransferase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=trmH PE=1 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 1.400e-22
Identity = 59/162 (36.42%), Postives = 92/162 (56.79%), Query Frame = 1


		  
Query: 133 DVRKERFRNVVRNRSFGVCLVVEGLSDYGNVSAVCRSADALGLQSVHAVSCDSS-KRFRD 192
           + R+ R   V+R R   + +++E +    N+SA+ R+ DA+G+   HAV+       F +
Sbjct: 6   EARRRRIEEVLRRRQPDLTVLLENVHKPHNLSAILRTCDAVGVLEAHAVNPTGGVPTFNE 65

Query: 193 NRHVSMGSEKWLDIEVWNSTPECFNVLKSRGYRIATTHLGKNTASIHDIDWSCPTAIVVG 252
               S GS KW+ + V     E F  LK RG+ +  T L ++     ++D++ PTA++ G
Sbjct: 66  T---SGGSHKWVYLRVHPDLHEAFRFLKERGFTVYATALREDARDFREVDYTKPTAVLFG 125

Query: 253 NENRGISEEALELSDLHCSIPMNGMVDSFNVSVAAGILMHQA 294
            E  G+SEEAL L+D    IPM GMV S NVSVAA +++ +A
Sbjct: 126 AEKWGVSEEALALADGAIKIPMLGMVQSLNVSVAAAVILFEA 164

[Close]

BLAST of Spo06488.1 vs. TAIR (Arabidopsis)
Match: AT5G15390.1 (tRNA/rRNA methyltransferase (SpoU) family protein)

HSP 1 Score: 391.7 bits (1005), Expect = 4.600e-109
Identity = 212/356 (59.55%), Postives = 256/356 (71.91%), Query Frame = 1


		  
Query: 1   MNISQTLTRTSLLSSHFSILNLPKLPFPH-GFQQNCRRIRCIPELSI--PESIAI----- 60
           MN  ++L R S+ S        P +P P+  F      +R    LS+  P S  I     
Sbjct: 1   MNSCKSLIRASISS-------FPFVPLPNPNFSITFISVRAFSPLSVLHPNSSCIVTARR 60

Query: 61  ----SEPLIPNS-TEDSAEDTVEQLLSPQDNKIVSKMMKMERKPSGGAVLRDNNGRWFPY 120
               +  L P S TE+S +DTV+ LL+    +  S +MKMER+ S      D  G WFPY
Sbjct: 61  TFHGAVALSPESLTEESPKDTVKGLLTTNRGE-ASSLMKMERRCSLSNGEGDCRGSWFPY 120

Query: 121 LDKFKVNDVYLSSAEVLEAIDPLILDVRKERFRNVVRNRSFGVCLVVEGLSDYGNVSAVC 180
            D+F+  +V+LSS EVLEA+ P +++ R +RFR VV NRS+ VCLVVEGLSD+GN+SA  
Sbjct: 121 EDRFRCGEVHLSSREVLEAVSPHMMEERTDRFRRVVENRSYSVCLVVEGLSDFGNISAAF 180

Query: 181 RSADALGLQSVHAVSCDSSKRFRDNRHVSMGSEKWLDIEVWNSTPECFNVLKSRGYRIAT 240
           RSADALG+QSVH VSCDSSKR+  NRHVSMG+EKWLDIE W++  ECF VLKSRGYRIAT
Sbjct: 181 RSADALGIQSVHVVSCDSSKRYNGNRHVSMGAEKWLDIEFWDTPKECFKVLKSRGYRIAT 240

Query: 241 THLGKNTASIHDIDWSCPTAIVVGNENRGISEEALELSDLHCSIPMNGMVDSFNVSVAAG 300
           THLG +T SI+D+DWSCPTAIVVGNE RGIS+EALELSDL CSIPMNGMVDSFNVSVAAG
Sbjct: 241 THLGMDTVSIYDMDWSCPTAIVVGNEGRGISDEALELSDLRCSIPMNGMVDSFNVSVAAG 300

Query: 301 ILMHQAVFDRTLRLGSHGDLTSEESQILLAEFFLRHSKSAISMAYEYAKRKLSNPT 344
           ILMH AV DRT RLGSHGDL+  E +IL+AEF LRHS+S+I +AYE+AKRK  + T
Sbjct: 301 ILMHHAVSDRTTRLGSHGDLSEAEKEILMAEFSLRHSRSSICIAYEFAKRKQQHST 348

The following BLAST results are available for this feature:

BLAST of Spo06488.1 vs. NCBI nr
BLAST of Spo06488.1 vs. UniProtKB/TrEMBL
BLAST of Spo06488.1 vs. ExPASy Swiss-Prot
BLAST of Spo06488.1 vs. TAIR (Arabidopsis)

BLAST of Spo06488.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902153937\|gb\|KNA05761.1\|	3.0e-195	99.4	hypothetical protein SOVF_1874...	[more]
gi\|731319345\|ref\|XP_010670207.1\|	8.9e-147	76.9	PREDICTED: uncharacterized pro...	[more]
gi\|595938113\|ref\|XP_007215633.1\|	8.1e-116	64.6	hypothetical protein PRUPE_ppa...	[more]
gi\|296082972\|emb\|CBI22273.3\|	3.4e-114	60.5	unnamed protein product [Vitis...	[more]
gi\|731419694\|ref\|XP_010661108.1\|	3.4e-114	60.5	PREDICTED: uncharacterized pro...	[more]

BLAST of Spo06488.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9QGS6_SPIOL	2.1e-195	99.4	Uncharacterized protein OS=Spi...	[more]
A0A0J8CYU2_BETVU	6.2e-147	76.9	Uncharacterized protein OS=Bet...	[more]
M5WSN7_PRUPE	5.7e-116	64.6	Uncharacterized protein OS=Pru...	[more]
D7SXH6_VITVI	2.4e-114	60.5	Putative uncharacterized prote...	[more]
B9T3S9_RICCO	4.1e-114	72.8	rRNA methylase, putative OS=Ri...	[more]

BLAST of Spo06488.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
TRMH_AQUAE	3.9e-25	32.9	tRNA (guanosine(18)-2'-O)-meth...	[more]
TRMH_ECO57	4.7e-23	35.2	tRNA (guanosine(18)-2'-O)-meth...	[more]
TRMH_ECOLI	4.7e-23	35.2	tRNA (guanosine(18)-2'-O)-meth...	[more]
TRMH_SHIFL	4.7e-23	35.2	tRNA (guanosine(18)-2'-O)-meth...	[more]
TRMH_THET2	1.4e-22	36.4	tRNA (guanosine(18)-2'-O)-meth...	[more]

BLAST of Spo06488.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1


Match Name	E-value	Identity	Description
AT5G15390.1	4.6e-109	59.5	tRNA/rRNA methyltransferase (S...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001537	tRNA/rRNA methyltransferase, SpoU type	PFAM	PF00588	SpoU_methylase	coord: 150..291 score: 8.6
None	No IPR available	PANTHER	PTHR12029	RNA METHYLTRANSFERASE	coord: 59..318 score: 8.5E
None	No IPR available	PANTHER	PTHR12029:SF45	RRNA METHYLASE-LIKE PROTEIN	coord: 59..318 score: 8.5E

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006396	RNA processing
biological_process	GO:0043085	positive regulation of catalytic activity
biological_process	GO:0009658	chloroplast organization
biological_process	GO:0016556	mRNA modification
biological_process	GO:0051252	regulation of RNA metabolic process
biological_process	GO:0030488	tRNA methylation
biological_process	GO:0034414	tRNA 3'-trailer cleavage, endonucleolytic
biological_process	GO:0045036	protein targeting to chloroplast
biological_process	GO:0006399	tRNA metabolic process
biological_process	GO:0000023	maltose metabolic process
biological_process	GO:0006098	pentose-phosphate shunt
biological_process	GO:0019252	starch biosynthetic process
biological_process	GO:0006766	vitamin metabolic process
biological_process	GO:0009793	embryo development ending in seed dormancy
biological_process	GO:0010103	stomatal complex morphogenesis
biological_process	GO:0042967	obsolete acyl-carrier-protein biosynthetic process
biological_process	GO:0042793	plastid transcription
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0019430	removal of superoxide radicals
biological_process	GO:0006855	drug transmembrane transport
biological_process	GO:0006457	protein folding
biological_process	GO:0009408	response to heat
biological_process	GO:0006351	transcription, DNA-templated
biological_process	GO:0006364	rRNA processing
biological_process	GO:0006636	unsaturated fatty acid biosynthetic process
biological_process	GO:0009965	leaf morphogenesis
biological_process	GO:0009073	aromatic amino acid family biosynthetic process
biological_process	GO:0030154	cell differentiation
biological_process	GO:0042545	cell wall modification
biological_process	GO:0015995	chlorophyll biosynthetic process
biological_process	GO:0019748	secondary metabolic process
biological_process	GO:0019344	cysteine biosynthetic process
biological_process	GO:0006546	glycine catabolic process
biological_process	GO:0016226	iron-sulfur cluster assembly
biological_process	GO:0019288	isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process	GO:0009695	jasmonic acid biosynthetic process
biological_process	GO:0009108	coenzyme biosynthetic process
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0009106	lipoate metabolic process
biological_process	GO:0009117	nucleotide metabolic process
biological_process	GO:0006733	oxidoreduction coenzyme metabolic process
biological_process	GO:0016310	phosphorylation
biological_process	GO:0010207	photosystem II assembly
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0009534	chloroplast thylakoid
cellular_component	GO:0042644	chloroplast nucleoid
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0009536	plastid
cellular_component	GO:0009295	nucleoid
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0015238	drug transmembrane transporter activity
molecular_function	GO:0051082	unfolded protein binding
molecular_function	GO:0031072	heat shock protein binding
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0009020	tRNA (guanosine-2'-O-)-methyltransferase activity
molecular_function	GO:0008168	methyltransferase activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0015297	antiporter activity
molecular_function	GO:0004784	superoxide dismutase activity
molecular_function	GO:0042781	3'-tRNA processing endoribonuclease activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0016301	kinase activity
molecular_function	GO:0008080	N-acetyltransferase activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008173	RNA methyltransferase activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo15841	0.82	Barchart \| Table
Spo08998	0.80	Barchart \| Table
Spo00921	0.78	Barchart \| Table
Spo02001	0.77	Barchart \| Table
Spo27291	0.75	Barchart \| Table
Spo20889	0.74	Barchart \| Table
Spo14310	0.74	Barchart \| Table
Spo15766	0.74	Barchart \| Table
Spo11933	0.73	Barchart \| Table
Spo26644	0.72	Barchart \| Table
Spo02922	0.72	Barchart \| Table
Spo09441	0.72	Barchart \| Table
Spo13374	0.71	Barchart \| Table
Spo19220	0.71	Barchart \| Table
Spo18908	0.71	Barchart \| Table
Spo17496	0.71	Barchart \| Table
Spo17081	0.71	Barchart \| Table
Spo09784	0.71	Barchart \| Table
Spo10702	0.71	Barchart \| Table
Spo18598	0.70	Barchart \| Table
Spo08879	0.70	Barchart \| Table
Spo08903	0.70	Barchart \| Table
Spo03358	0.70	Barchart \| Table
Spo03057	0.70	Barchart \| Table
Spo02964	0.70	Barchart \| Table
Spo01831	0.70	Barchart \| Table
Spo08165	0.70	Barchart \| Table
Spo18150	0.70	Barchart \| Table
Spo19859	0.69	Barchart \| Table
Spo08288	0.69	Barchart \| Table
Spo18296	0.69	Barchart \| Table
Spo21501	0.69	Barchart \| Table
Spo23127	0.69	Barchart \| Table
Spo24750	0.69	Barchart \| Table
Spo26857	0.69	Barchart \| Table
Spo15135	0.68	Barchart \| Table
Spo12071	0.68	Barchart \| Table
Spo11221	0.68	Barchart \| Table
Spo10623	0.68	Barchart \| Table
Spo25913	0.68	Barchart \| Table
Spo15025	0.68	Barchart \| Table
Spo18479	0.68	Barchart \| Table
Spo00155	0.67	Barchart \| Table
Spo23441	0.67	Barchart \| Table
Spo11928	0.67	Barchart \| Table
Spo16686	0.67	Barchart \| Table
Spo00616	0.67	Barchart \| Table
Spo16904	0.67	Barchart \| Table
Spo23227	0.67	Barchart \| Table
Spo26195	0.67	Barchart \| Table
Spo14747	0.67	Barchart \| Table
Spo18860	0.67	Barchart \| Table
Spo25123	0.67	Barchart \| Table
Spo14013	0.67	Barchart \| Table
Spo23933	0.67	Barchart \| Table
Spo17348	0.67	Barchart \| Table
Spo12778	0.66	Barchart \| Table
Spo09493	0.66	Barchart \| Table
Spo08599	0.66	Barchart \| Table
Spo16892	0.66	Barchart \| Table
Spo17114	0.66	Barchart \| Table
Spo06162	0.66	Barchart \| Table
Spo18480	0.66	Barchart \| Table
Spo05510	0.66	Barchart \| Table
Spo02601	0.66	Barchart \| Table
Spo19776	0.66	Barchart \| Table
Spo20515	0.66	Barchart \| Table
Spo02271	0.66	Barchart \| Table
Spo20995	0.66	Barchart \| Table
Spo26727	0.66	Barchart \| Table
Spo26978	0.66	Barchart \| Table
Spo26008	0.66	Barchart \| Table
Spo11445	0.66	Barchart \| Table
Spo12610	0.66	Barchart \| Table
Spo14159	0.65	Barchart \| Table
Spo02816	0.65	Barchart \| Table
Spo06287	0.65	Barchart \| Table
Spo15631	0.65	Barchart \| Table
Spo07928	0.65	Barchart \| Table
Spo16184	0.65	Barchart \| Table
Spo00263	0.65	Barchart \| Table
Spo22284	0.65	Barchart \| Table
Spo20295	0.65	Barchart \| Table
Spo19418	0.65	Barchart \| Table