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Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGAACTTTGGAATAAGCCCAGGGCTTCTCCCCTCTGCATCTCCCCGATTCTTTCCCACGACAACCCACCTTACTCACCACCGTCGTTGCTTCCCTCTTCTCTCCTGTGTCCCATCTTCTCTCCTCTCCAGCAGTCAAGACGCCGACTTGCTACTTAACACCGCCGACACCGACTTGATACTGCTTAACACCACCGACGCCGAGTTGCTACTGTTTAACACCGTCGACGCCACCGCCTCCTCTCCTGGGCAAATAATCATGTGCACCGCCACCGTCGCGGACTTGCCTCCTTCTTTACACCTCTAAGAGGTAGTTCATACATTATTCTCTTCTCTAATTCTAGGTTTTCTACCTATTATGTATTTTTGCAATTCAAATTAAATTTCTCACCATTTTGAATTGGAAAATATTTTTGTGATAAATATTAATTTTTCAGATTAATTCATATTGAATTTCTGTAATCAAAATAATTGAATTTTTGTAATTTTATCAAGCTCTATAATAATTTTACCAGCTTTTAGTTTTTCTGTTTTATTGCCTTTCTGGGGATGTGCAGGAACGCAGAGGTTCAGGACTGAGTTAAAGAAGACATTGTTGAGAGATGAAGATGCATTAGGGGATGAACTTGATCGGGTTGTAAATGTTTTCAACGAGGTGATTACAGCTCAACTGTCCTTATGGTGTTGTTTATTGTGTCTTACATTTTTATGTTCCCTTAAGGTGCTTAATGAGTTGCTTGACTAAACTTATTTGTGTGAATTTGTAGTTTGGTGTGGTAAAAACCTGACTATATTGGTTGTAGTTAGCAGGAACTGGTTTTGTTTGACATGTCTGATATTAGAGTGAGTTAGTTGGTAGTTGGGTTAGTTGAAGGTAGTTGCTAAATTGGTTAATTTTCTAGTTTTCCATGAAATTCTGTTAGCTTTAGGTTCGTTAATTATATAAAGAGAGGAAAAAGGCAAGGAATTTCATTCCTTTTCCAAATATTTTTGTAACGTTGTAGTCGAAAAGACTAGTCTGTTGGGAATTGGGATGAGATGGTTAGCATATTGGTGATCAAGGCCTAGTCCCGTCAGTTCTGCAATTTCCAACTTGCCTATTGTAATGTCATGGAGTTTCCTTATTGCTGTCAGAGTATTACTTCTAACATTCAAGCTGTAGAAAATTTTATGCAGAAAAACGGGGGTCACATAACAGGTAGTGAAGTGTTGATATCTGCTGAAATTGAATCATCTCTTTTATGTTGGTTGATCTAAAACTCTGAAGCTATTACATCTTTATCACGTACATTATGAGTAATTGTGTAGCTATGCTGATTTTGTAGGATGTTACATTAACCAGTCAGAGGATTGATCATGATACATTGGAGATATGGGTATGCTAGCCCATGTAACTTCAAAGAGTCTTGTGCCCGATATTATTTTTCCGGGTTAATTTGCATTATCTTACCAAGTTACCTACGTAGCAATTAGACGCATGTGTAAAACCAGTTGTTACTTATCCCCTTTGGTTTTGTTTATCATTACTGAAGTCAACTTGAATATCTTTTGTTCACTTTCTCTAAGTGATTTTTCATCGTGAAAACCATGTCTTCGCCTTGATGCAAATTAGAGACTGTCTCACTTATAGACTGTCTACTGGAAGAGTGAACTAGTATTGAGATTGTAATAAGCTTCTTTTTATTTTGATTTTCCTTTTCGGGTTTTTGCTGTGTTTTCTGTGTGTTTCTGCTCTGTTTGCTTCTGCTGCTGCTCTGTATGTTATTGTTTCTGCTTTTCTTCTGCTGCTGCTCTGTGTGTTGTTTTTTCTGCTTTGCTTCTTTTGTTTTCTCGGCACTTGGATTGCAGGGTTCTCTTTGACAACAACTTCACTGATGAGGAACATATAAAGAACGGTTCTTGTACTTCAAGCTGTTCTATACTGACTTCCGATGTTTCAAAAAGAGAGTTAGTAAAATGCATTGATGCATCATATACAGTAAGCTGATCTCTTGCCTTTGACTGTCTTGAATGTGTTGTTACTTTGAATTCACTTTTGTTTACTTGCTTTATGTACATAAATTGGTTCTCATGAAGCAGTTTCAAGGACAAGTCTTCTTAACTTTTGGTTTGCTGTTTGGTGATGTTTTAGCTGCTAATGCAACATTCAACAAGGTCATTTGTGGGTTAGTAATCAATATCCTTCCCTTCTTAGCTTCACTTCTATAACTTTTTCTAATTAATGGTTTTTGATTGAAGTTTGTACTATTAATAACTTCCATTCCCAACACACATACCCACACATTCACACCAACCTCCTATGTAACAACAGAAATGGCAAGTTGTGAAGGTCTGGAATCCTTGATACACCATTTTTCTTGTTGTTGTAGAACTTCAATTACCATTACCACAATTCCTTAGCACTTACCAATTCCATTGTCAAAGAAATTACTTATTTTCCTCAAAGGCTAATTTCTTATTATATGAAACCAATTCTTAGTTTCTTAGTTCTTACCAATAATTTTCATCTAACTGAACGAGTAGGTACGAGTAGGTACTTCTGCTAGTGCACCTCTAACTAATACGAATTATGATGTTATGTTTATGATCTACTTCTCTTCTAAGATCTACTTATGTTAATCCTAATATTCTGCCTTAACTCCAGGATTTTTTTAGCACCACTGATGAGGTCGAAGTCTTACGGAAATATACCTCAACCACATGTAATTTTATATTACTCTCAGCGTGCTACAAATGGAGGTTTGCTCATAGCTGAAGCAACTGGATTTTCTGAAACTTCTCAAGGGTATGTTTTAGGCACCGATTTTGTATAAGACTGCAGATAACTCTGTTCTATTAGAAGACTTTGTGATGTGGATCAGTTTGAAAACTTGCAGACGATCCCTGTCATCGACAAGAAATTCTCCTGCGAACTTAAATTGGTTTGACCTGTGCAGGTATCCAGACAGACCTGGTATATGGACGAAAGAACAAGTTAAAGCCTGGAAACCTATTTTTTTTGCATGCTAAAGGTGGTGTATTTTTTTTTGTCACCTGTGGCATGTTGGACGAGTTTCTAATCAAGGTAATCACCTTGAACCTTTTACTCGTAATGACTCATCATAGTTTTGGGGTGTTTTGGCATATTGATTGAAACTGAAATTTAAGGTCTAGATTAAAAATTAGTAGCTTTATAGAATATATAGTTGTATGGTTTCCCTACAGATATATGGAGTTGTTTATTTTTGTCCGAAACACAATTAGAAATTCATAATAATTTGCTTGTTTTGTAAATACAACCTGTTAAGTTTTTTTTGGGAGAGAGGGAGTATCAAATTTTCTTTCTAGCTGGATTTCAAGCATAGATAAATATGTTTTATGTTATTCTCATAGACTCGTGATATTTTTCATCTTTCTTAGTTTTTGGACTGTGCTAAGAGTAACCAATTTTTCATATTGCAAAAGATTTCCATCCAAAGCAGCAAGCTCCAATCTCGTGCACCGATAAGCCTCTAAAACCTCAAGTTTGGGGAAATGACTCTGATACTTCATAGCATTCAAACCCCAAGGCGGCTAAGAGAGGATGAGATACCTTTAGTTGTAAATGATTTCAGACTTGCTAGAAGGAATGCCATAGAAGCTGGTAAGTTTTTTCATGGATTCTTAATTAGTTAATCAACTCCTATTCTAACTAACACAACGCCAAAAGCTCTTCTTAATGCTTTGAATTTGAATTTATATATATTTTCGTTTGCTTCTACCCCATGATTACCTAAAATTTCAGAGACTAAACTTGATGTCCAGGCTTTGACGGTGTTGAAATCCATGGAGATAATGGCTACCTCATCGATCAGTTTATGAAAGACCAAGTCAATGATCGAACATACAACTATAGTGGATATCTTGAGAACCGTTGCAGATATGCTCTAAAAGCAGTTGAGGCAATTGTAAAGGAGACTGGGGCAGATAGAGTTGGG ATGAACTTTGGAATAAGCCCAGGGCTTCTCCCCTCTGCATCTCCCCGATTCTTTCCCACGACAACCCACCTTACTCACCACCGTCGTTGCTTCCCTCTTCTCTCCTGTGTCCCATCTTCTCTCCTCTCCAGCAGTCAAGACGCCGACTTGCTACTTAACACCGCCGACACCGACTTGATACTGCTTAACACCACCGACGCCGAGTTGCTACTGTTTAACACCGTCGACGCCACCGCCTCCTCTCCTGGGCAAATAATCATGTGCACCGCCACCAGGTTCAGGACTGAGTTAAAGAAGACATTGTTGAGAGATGAAGATGCATTAGGGGATGAACTTGATCGGGTTGTAAATGTTTTCAACGAGGATGTTACATTAACCAGTCAGAGGATTGATCATGATACATTGGAGATATGGTTTCAAGGACAAGTCTTCTTAACTTTTGGTTTGCTGTTTGGTGATGTTTTAGCTGCTAATGCAACATTCAACAAGGTCATTTGTGGGATTTTTTTAGCACCACTGATGAGGTCGAAGTCTTACGGAAATATACCTCAACCACATGTAATTTTATATTACTCTCAGCGTGCTACAAATGGAGGTTTGCTCATAGCTGAAGCAACTGGATTTTCTGAAACTTCTCAAGGGTATCCAGACAGACCTGTTTCTAATCAAGATTTCCATCCAAAGCAGCAAGCTCCAATCTCGTGCACCGATAAGCCTCTAAAACCTCAAGTTTGGGGAAATGACTCTGATACTTCATAGCATTCAAACCCCAAGGCGGCTAAGAGAGGATGAGATACCTTTAGTTGTAAATGATTTCAGACTTGCTAGAAGGAATGCCATAGAAGCTGGCTTTGACGGTGTTGAAATCCATGGAGATAATGGCTACCTCATCGATCAGTTTATGAAAGACCAAGTCAATGATCGAACATACAACTATAGTGGATATCTTGAGAACCGTTGCAGATATGCTCTAAAAGCAGTTGAGGCAATTGTAAAGGAGACTGGGGCAGATAGAGTTGGG ATGAACTTTGGAATAAGCCCAGGGCTTCTCCCCTCTGCATCTCCCCGATTCTTTCCCACGACAACCCACCTTACTCACCACCGTCGTTGCTTCCCTCTTCTCTCCTGTGTCCCATCTTCTCTCCTCTCCAGCAGTCAAGACGCCGACTTGCTACTTAACACCGCCGACACCGACTTGATACTGCTTAACACCACCGACGCCGAGTTGCTACTGTTTAACACCGTCGACGCCACCGCCTCCTCTCCTGGGCAAATAATCATGTGCACCGCCACCAGGTTCAGGACTGAGTTAAAGAAGACATTGTTGAGAGATGAAGATGCATTAGGGGATGAACTTGATCGGGTTGTAAATGTTTTCAACGAGGATGTTACATTAACCAGTCAGAGGATTGATCATGATACATTGGAGATATGGTTTCAAGGACAAGTCTTCTTAACTTTTGGTTTGCTGTTTGGTGATGTTTTAGCTGCTAATGCAACATTCAACAAGGTCATTTGTGGGATTTTTTTAGCACCACTGATGAGGTCGAAGTCTTACGGAAATATACCTCAACCACATGTAATTTTATATTACTCTCAGCGTGCTACAAATGGAGGTTTGCTCATAGCTGAAGCAACTGGATTTTCTGAAACTTCTCAAGGGTATCCAGACAGACCTGTTTCTAATCAAGATTTCCATCCAAAGCAGCAAGCTCCAATCTCGTGCACCGATAAGCCTCTAAAACCTCAAGTTTGGGGAAATGACTCTGATACTTCATAG MNFGISPGLLPSASPRFFPTTTHLTHHRRCFPLLSCVPSSLLSSSQDADLLLNTADTDLILLNTTDAELLLFNTVDATASSPGQIIMCTATRFRTELKKTLLRDEDALGDELDRVVNVFNEDVTLTSQRIDHDTLEIWFQGQVFLTFGLLFGDVLAANATFNKVICGIFLAPLMRSKSYGNIPQPHVILYYSQRATNGGLLIAEATGFSETSQGYPDRPVSNQDFHPKQQAPISCTDKPLKPQVWGNDSDTS Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo06449.1 vs. NCBI nr
Match: gi|902203597|gb|KNA14604.1| (hypothetical protein SOVF_105700 [Spinacia oleracea]) HSP 1 Score: 126.7 bits (317), Expect = 5.700e-26 Identity = 69/116 (59.48%), Postives = 75/116 (64.66%), Query Frame = 1
BLAST of Spo06449.1 vs. NCBI nr
Match: gi|902208232|gb|KNA15893.1| (hypothetical protein SOVF_094220 isoform B [Spinacia oleracea]) HSP 1 Score: 109.4 bits (272), Expect = 9.400e-21 Identity = 56/100 (56.00%), Postives = 64/100 (64.00%), Query Frame = 1
BLAST of Spo06449.1 vs. NCBI nr
Match: gi|698554279|ref|XP_009770174.1| (PREDICTED: 12-oxophytodienoate reductase 1-like isoform X2 [Nicotiana sylvestris]) HSP 1 Score: 108.2 bits (269), Expect = 2.100e-20 Identity = 59/130 (45.38%), Postives = 71/130 (54.62%), Query Frame = 1
BLAST of Spo06449.1 vs. NCBI nr
Match: gi|902208231|gb|KNA15892.1| (hypothetical protein SOVF_094220 isoform A [Spinacia oleracea]) HSP 1 Score: 108.2 bits (269), Expect = 2.100e-20 Identity = 58/117 (49.57%), Postives = 66/117 (56.41%), Query Frame = 1
BLAST of Spo06449.1 vs. NCBI nr
Match: gi|697112782|ref|XP_009610272.1| (PREDICTED: 12-oxophytodienoate reductase 1-like isoform X2 [Nicotiana tomentosiformis]) HSP 1 Score: 107.8 bits (268), Expect = 2.700e-20 Identity = 58/120 (48.33%), Postives = 68/120 (56.67%), Query Frame = 1
BLAST of Spo06449.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R6P3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_105700 PE=4 SV=1) HSP 1 Score: 126.7 bits (317), Expect = 4.000e-26 Identity = 69/116 (59.48%), Postives = 75/116 (64.66%), Query Frame = 1
BLAST of Spo06449.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R8L6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_094220 PE=4 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 6.500e-21 Identity = 56/100 (56.00%), Postives = 64/100 (64.00%), Query Frame = 1
BLAST of Spo06449.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RAS5_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_094220 PE=4 SV=1) HSP 1 Score: 108.2 bits (269), Expect = 1.500e-20 Identity = 58/117 (49.57%), Postives = 66/117 (56.41%), Query Frame = 1
BLAST of Spo06449.1 vs. UniProtKB/TrEMBL
Match: K3Y851_SETIT (Uncharacterized protein OS=Setaria italica GN=SETIT_010392mg PE=4 SV=1) HSP 1 Score: 106.3 bits (264), Expect = 5.500e-20 Identity = 59/119 (49.58%), Postives = 65/119 (54.62%), Query Frame = 1
BLAST of Spo06449.1 vs. UniProtKB/TrEMBL
Match: Q49HE0_MAIZE (12-oxo-phytodienoic acid reductase OS=Zea mays GN=OPR5 PE=2 SV=1) HSP 1 Score: 106.3 bits (264), Expect = 5.500e-20 Identity = 59/119 (49.58%), Postives = 65/119 (54.62%), Query Frame = 1
BLAST of Spo06449.1 vs. ExPASy Swiss-Prot
Match: OPR2_ARATH (12-oxophytodienoate reductase 2 OS=Arabidopsis thaliana GN=OPR2 PE=1 SV=2) HSP 1 Score: 103.6 bits (257), Expect = 3.200e-21 Identity = 55/117 (47.01%), Postives = 66/117 (56.41%), Query Frame = 1
BLAST of Spo06449.1 vs. ExPASy Swiss-Prot
Match: OPR1_ARATH (12-oxophytodienoate reductase 1 OS=Arabidopsis thaliana GN=OPR1 PE=1 SV=2) HSP 1 Score: 97.4 bits (241), Expect = 2.300e-19 Identity = 52/117 (44.44%), Postives = 61/117 (52.14%), Query Frame = 1
BLAST of Spo06449.1 vs. ExPASy Swiss-Prot
Match: OPR11_ORYSJ (Putative 12-oxophytodienoate reductase 11 OS=Oryza sativa subsp. japonica GN=OPR11 PE=2 SV=1) HSP 1 Score: 92.8 bits (229), Expect = 5.700e-18 Identity = 53/119 (44.54%), Postives = 60/119 (50.42%), Query Frame = 1
BLAST of Spo06449.1 vs. ExPASy Swiss-Prot
Match: OPR8_ORYSJ (Putative 12-oxophytodienoate reductase 8 OS=Oryza sativa subsp. japonica GN=OPR8 PE=2 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 2.800e-17 Identity = 50/108 (46.30%), Postives = 56/108 (51.85%), Query Frame = 1
BLAST of Spo06449.1 vs. ExPASy Swiss-Prot
Match: OPR6_ORYSJ (Putative 12-oxophytodienoate reductase 6 OS=Oryza sativa subsp. japonica GN=OPR6 PE=2 SV=1) HSP 1 Score: 89.7 bits (221), Expect = 4.800e-17 Identity = 49/113 (43.36%), Postives = 58/113 (51.33%), Query Frame = 1
BLAST of Spo06449.1 vs. TAIR (Arabidopsis)
Match: AT1G76690.1 (12-oxophytodienoate reductase 2) HSP 1 Score: 103.6 bits (257), Expect = 1.800e-22 Identity = 55/117 (47.01%), Postives = 66/117 (56.41%), Query Frame = 1
BLAST of Spo06449.1 vs. TAIR (Arabidopsis)
Match: AT1G76680.2 (12-oxophytodienoate reductase 1) HSP 1 Score: 97.4 bits (241), Expect = 1.300e-20 Identity = 52/117 (44.44%), Postives = 61/117 (52.14%), Query Frame = 1
BLAST of Spo06449.1 vs. TAIR (Arabidopsis)
Match: AT1G17990.1 (FMN-linked oxidoreductases superfamily protein) HSP 1 Score: 77.4 bits (189), Expect = 1.400e-14 Identity = 48/106 (45.28%), Postives = 58/106 (54.72%), Query Frame = 1
BLAST of Spo06449.1 vs. TAIR (Arabidopsis)
Match: AT1G18020.1 (FMN-linked oxidoreductases superfamily protein) HSP 1 Score: 77.4 bits (189), Expect = 1.400e-14 Identity = 48/106 (45.28%), Postives = 58/106 (54.72%), Query Frame = 1
BLAST of Spo06449.1 vs. TAIR (Arabidopsis)
Match: AT1G09400.1 (FMN-linked oxidoreductases superfamily protein) HSP 1 Score: 75.5 bits (184), Expect = 5.300e-14 Identity = 43/106 (40.57%), Postives = 53/106 (50.00%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo06449.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo06449.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo06449.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo06449.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
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