Spo06181 (gene)

Overview
NameSpo06181
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionReplication protein A 32 kDa subunit-like protein
Locationchr2 : 21667343 .. 21676786 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATTGGAAGCACGAAACGAGCGATGGACCATCGCACGAAGCAATGACCCATCGCTCGACGGGCCGTAGCGCAACGCCTAGCTCGATGGGCCAGCGTGCCAAGCAAGCAAGGCCAGCTGCTGCCCAGCGTGCATGGGCCAGCGCTGTTGCGCCTAGCACACGGGCCATCGCTGTTGTGCCTGTTGCTTGGCCAGCGCGGTTGGGCCTACGCGTGCAAGGCCATAGTTGGTCGGTTTACTTGCTATGCAAGCAGCCTGCCAACCCTAGTGTTTTAGGGTTTTGGTTTTTGGTATATATTCAAAACTTTCCTAAATCGTTCTAGGGGTTTTGGCTCCTAGGGTTTTTCCTATTTCCTATAAATACATGGCTTATGGTCATGAATTAAAATACACAATTCAATGCACTTTGCCTATCACCTAAAAGTGAGACCCCGAAATCATAAACCTTATTGTATATCCTATTTGGTACGATCTAAGACGAATCCGAACGTACTGTTGACTTTCTATGGAGGGACGACGTTTGGCAAGGGAAGGCACTCATCACAAAGTGTGTTCACTAAATTATGCTAAATGATTATGTGCATTAATTTGGATTTTGGCATTTATGGTTTATTCCGCATGACATTAGATTTTTCATAACCTAACAAAGTTCTGGTTCTCAATTTTTCGGAACGGGTACCCTGTACACACCAATTCTAATATGGAGTACCCAAAATAAGGATTCGGGCCATATAAAATAACTTCATCTGCCCAAGATATACGGAGTACAATCCAAGCTAATTTTTGGAAAATAATTAAATATAAAATTATAATCTAAGCCCAACCTATAAAACAATCAAAGTCCAAACCTTAAAGTAGATTTTTTTTCCCAATTAATTAGCAATATTTATTAAATATTTTAAAATGACAGAAGTTCTGGTTATCATTTTAAAACTTGTTGAAATAGGTTACGATTCAAATTCCGATTCCTGAAGTTTGACATAACCCTGTTACAGTTGTGCTCAACCCTATTAGATAGCAAGCCCAAAACTTACTCCCTAAAAAACGCGGGAAATGCTAGTCGTACTTGGTACGTAACTCTACTAACATCACCACTCCGTCACTTACGCTCTCACAATCTCACACAGCTGCGTAAACCGCCTTTTCCCTCTCACTTGTTCAAAATCAATTTCTAGGGTTTCGAATTCTCGCAGTAGTTGCACAATTCATTACTCAATCACATCAGAAATGTTTAACAGCCAATTCGACGGAAACGCCGCCTTCTCCGGTGGCGGTTTCATGCCTTCTCAAGCCACTCAGTCCGCCGACCCTTCCTATTCTACCGCGAAAGTATTTTCTCCCTCGCATTTCCCTTTTTTTGTGTGTGTTTTAAATCATCGTAATGCTATTTTCGTTCCTAAATTTAGTGTTTGTTGACGTGAATTGAGAATTTATATTAATTAGGGTTTTCATTTTCATTTGGTGTTTGAATTAATTGATGCGTGTTACAGAATCGTGATGCTCAGGCATTAGTGCCATTGACAGTGAAGCAGATGAATGAAGCTGTTTCAGCTTCCAACGAGAGTGGAACTTTCCTGGTTGACGGTGTTGATGTTAGCAATGTATGCTGTTCTTTTTTCTCTTGATTGTTGTTTTGAAAGTTAATTGAATTGTTGGTCCTATAGTTGTAAATTTAATTTCAGCAATGAGAGTTAAGGTTGGAAATTTTGTCGACTTAGGTGACACTTGTTGGGTTGGTGTTTAACAAGACTGAAAGGGTTACTGACGTTGGTTTTGTCCTCGATGATGGAACTGGGAGGATTGATGTTCACAGATGGTAAGGATTTTGATTTTGTGGATTTTTGGGTTTGTGTTATGCGGAATTATTGTTTTAAAGTTATGAAATTTGTTTGTGGCTCAACAGGGTTAATGAACCTCACGACTCGAATGAATTGTCAAAGATTATGTGAGTTACTTGATCCTTTTATTCTCGCAGCATATTTTTTGTTATGACTTTTAGATTAAGACAGGTCACTTGTGTGTTTTCCTTGATATTTAGATACTGATTGTAATTTTTTAGTACACTCTCTGTCTTATAAGGTGTGAAACAATTTTCTAATATTGGTTGTCGTGAAAGATGGTTAAAATTGCACTGGAGTCATGCATAACTGTTGTATATATAGGGCTAGTTATCATGGTAGCCAGCGATCTACATGTTCCTTATGCAATTCTATTTTGGAAGTGTCATGAAAGTTTCATGAAAGTTGACTCTGTCCTGTTTAGAGTATTACTGTAAAATGTTGCCAATTATGTAGGACGGAGGGAGTTTTTAGTTTGAGAACTATCTGGGAATGTGGCTTCTGGAGAGATGTTTGCTTTCCATTGTTTATTGTGACAAAGTAGTTTTTTCTAAAGTTACTTTCATCTCTCTGACAACAGGGATGGTATGTATGTACGTATCTATGCAAGTTTGAAAGGGTTTCATGGTAAAAAGCAATTGACGGCATTTTCTGTCAGGTATACTCGAAATTCTTGTAGGTTCTTTTTCTTCTTCATAGATATCTGGAACTTGCGTAAACTAGACACTGATTTTTGTGTTAGCTCGCCGTGTTGTCTGATAACTTTTTGTGTTAGATTGTCCTTTCTTATAAAAAATACTGAGTTTGAAGTTCTCAGTTTTAGACTGTCTTCTAGGGTTGCGTTATTTTTCTTGACGGGTAGAATGGGAAGGTGAGATAGGGGAATTGAAATAGACAAAAAGATAAATTTGTGAGGGAGTATAGTGGCCTTCCAGCTCAACCAGCCAGTTTGTTGGATAGCAAGTTAGTGTTGATCTATCTCAGTGATGTTCTATGTTGTTTTGTTGTGAACCATAAGTCATCTTTTCTGGGGACTGTTAACCGGCAAATGAAGTTATTACATTTTCCTTATTAGAGGTAAAACTGAATTTAGTTATTTGCATACACTGTCATGAGAACTTTTGTATGTTGGGAATCCCTCTAATTTTGGCTTAAAGTGAATGGGTCGTGGTTTGATAGAAGGAAGATATGTTACAAAGTCTTGTCTTGTGTGTCTATGTTATTATGACAAGTATTTAGGTGATCATTGCTATTCCTATATCAGAATCTCAAAGTAGTGGAAATGAAGTGTAACCAGCCATTTTGATTGAGGTATTCATGAAACTTGGAATCTTGTGCTTTCAGAATTGATATTTGAGTGGAAGTAGCATTTGGAAGATATTACAAAGTCTTGTCTTGTGTGTCTATATTATTATGACAAGTAAAGTATTTAGGTGATCGTTGCTATTCCTTATCAGAATCTTAAAGTAGTGGAAATGAAGTGTAACCAGCCATTTTGATTGAGATATTCATGAAACTTGGAATCTTGTGCTTTCAGAATTGATATATGAGTGGAAATTAAGTCACGCATACACTTAATGCACAGGGGTAATGCTTATGTCTTTCACAACAATGTTTAGTAACAAGAAGTGTAGTCATTGCGAAATACTCCTTCTGTCTCTTTTTATTTTTTACGTATTTCGTTTTCAGTGTCCCATCTTAGTCTTTACATTTGGAATATTTCCTTTTATACTATAGAATAAATATCCTTAATATTCTGTCAAAAATCGTGCAATTGATTATTTTCATCAATCAAATTCATTGAGACATTAAATCTTTCACATTTTTCCATTGGAAAATTAGATATTTCACACTTTTCCAATGTCATATTTTGGATAAAAGTGAATATTATCAATAAACGTAATTTGCATTGTTTAAATAAAAAAAGTATAAATCTTTATCAACATTAATTAGTTGTTAAATCGCGTGCATGATACCAAACGTAAAGAAAAAAAGGGACGGAGGAAGTATATATTTTTTAATCCTCCTAGGATCTAGTGATGGATTTTCATGGATCAATCTCTTTTCGAGGGATCGCAGGGCTGGAGAGTTTCCACACTTAGGTTGGTTGAATTAGTGAATGTCTGGAGCTTAGTTTAAAAAGGCGCAAGGCGCACTAAGGCGCACAAGGGTCATGGAGCCTAGGCGCAAGGCACAAGGCACAAGGCTCAGGCGCGCGCCTTTTGGATACAAGGCGCACATAATTTTCTAATAAACCTTAAAATTCGGTAAAGAAAAAAATTAACACAATTTATACGCAAAACAACATATTTCTATTGGAGTGCCATATTTTCTTGCCGGTTCATAAGCATCGCGTGATCCCGTCGATGGAGTGCTAGAATTAGAACCTTCCATGGTAATTACGAGCTAGAAATATGAAAATTAACTCATATTATGCTGCTTCCACTACCCAAAAAGCTAAGGTTGTAGAGATATGACCTTTGATAGGTCACATGGGGTGTGTTTATATCATTAAAAAAGAAAAAAAATGTAAATAAAAGATCCACGTCATCCTACCGCGCCTGAAGACGGAAGGCGCACAAGGCGCAGCGTGCGCCTTACCTAAGGCGCACAAAGGCGCATGAAGGCGCGTGCCTGGTTGACATCAGTGAGCCTTGAGAGCTCAAGGCGCCGAAGGCTGAGCCTAGGTGAGCCTTGCGCCTAGGCGCGCCTTGGGCGCGCTTTTTTAAACTAAGGTCTGGAGGTACAAATGACACTGGACTAATATGGTGTTTCTGTGTTGATATTTTGTTTTCTTGGTTGAGTCCTAGCTCCATGCTGCATACCTCCTGACTCCGGTAGTACAGGGCCTCTTTCCATCCTCACTTTCTGGCACTATGAAATGTGGACACTTTTGAATTGAAACTAAAAAAGTATATGAATAAGTTAGTCCATCCTCCATCCCCTCCTATACACCCCCATATCTCATTCGTGTTCTGTGTTCAAGAATCATAATTCATTGATTATTAGGTTTAGTTATTCCTGAATTTGAATTCTTATGAAATTAGATTCAGCCCTATAATTTTCATTTCTAATTGATACTAGCTTCGCAGTTTACAGAAAATTCATTGATGAATAAGTATCTTGAATTATATCGTGGAAGGTCAGAATTTGACACATAGATTTTCTCTAGTGTCCAAGTTAAAGTCGTCTTAACTAGGCTCTGAATCTCGGTCATTCTGTAAGTGTTTTAGTGCACTTATTGGTTCAGCACTAAGCTTGAGACATGTAACTTTTGATGTCATCCAGTTGGTTTCAGTTAGAAACAAGTACACGGATTTTTATCTGTAAAATCAGTCTCCAAGCTGAAGCTTTTAGCTTGTTCAATAACGTAATGCCGATTCATAAACAAATTGATAATGGATTTATATTAAGGTTGATGTTATTATTTAATTGCTGAGGACAGTATTAACTTAGAAAAGGAGAACTGGCCAAGGCTGCTATTTGGCAGCGCCTGGAAAAACTTTTTCATGATTGACAATATGTCTTTTACGTGGGGTATGCACTTAAGGAATTGAGGTTCTAAATTAGGTGTAAACTAGAGCTGGCAAAATCTATCCTCGATTTGAAATCAAACTTGTTGAAGACAGGCTTTGAAAACGGGCTTTGAAGAGATACTTATGAATCACAACCTTGCTGTAACCTTGCCTATGACTAAATATCATTGGGTACATTAATATATTTTGGTATATGCAAACAATATGCAAACAATATGATATAATAATATAAGGTCATGAACCCAAAAGTAATACCAAAAATTTGAGAAATAGAAAATACGTGAAGTTATTGCATAATGATAAGGGTTAAGTACTTTTGAGGAATTAAAAAAGAAGGGTGTATTACTTTAAGGGTTATGTATCATCGTGTGAGAATGAAGTTTAGAAAAGGTATAAGAAAGAGAGAGACTTTGTTTTCATCACAATTAGGTTGCAAGCAAACTGCATTAAGTTCTTTTCTCTTTGCACTTTGATGGATGAGTTGACAAAGTTTTTACACTATGAGGTTCCTTGGCGTACGTTGTTCACTTGTTTGTAGATGATATTGTTCTAACGGAAGGGTTTGGACCACATTTTGATGACAAGTTAAAATTGTGGGGTCAAGAGTTGGAAATCCGGGACTTAAGGTTGAGCTGAACTAAACAGAATATTTGGAGTGCGAATTTGTTACAGATGAAGGTTTAGATATTAGTGATTTTTTTTATTTTTTGGTGGAAAGATATTAGTGATTATGAATGTAAGCCTGTAAGGCTCTCCCGAGCACAAAAATTAAGATGCTGACCAAGATGTTTACTGTTTAGACTCAAATCATCTGGAAAGGAGCATTTAGACTACAATGTGATCACAATGTTAAAGTTTTATAGGACTTTTCCAGCCAGCTGACAGATTGAAATGTTGGGCTTTTAAGGAAGATCATCTTTGGAAGATAAACCTGGTGAAGATATCTTCGAAGAGGGATGTCTGGTAATACAAAAAGAGAGATTACGTTATGAAAATGTCTGCAGTTGGGTGAGTGGATATCTATTTGATTTAAGGTGAGTGTGAATGGACTGTGGTTCTAACAGCAACATGGCTGTGGTTGATGAATCATGTTGGATTGGACCAGAGTGAATGGAGAACGATGTGAGGGACTCATGGGGCCATGTTGTAAAACTTCCTTTGTTTTGGACTTTTAGGTAAAGAAAATTTTGTTATTAACTTCTAGGGTTGATCTGAAGTTTAAACTAGCCCGAAAACAAAATACTTCAAATTGCTAGACTTGCAGTAGCGGAGCCGGACTATACTTAAATGGCTTCTTTTGCAGGTCTGGGTGAAATGTTTTGAACAATTTTAAGTCTGATTCTTTCACCACCAGGTCTGTGTTAAGCTGGCTTGCTATGTTAATAATGCATGGAAACATAAATAGAGAATTTCCAAAATTATGGGTACAAAACTTGGTCTAAATTAATGAGATCTGTGGAACATTCTAGTGAATTTTTTGCCCCAAATATGACAAGGAAAAATAAATTCTTACCAATGGCTTGATATACCCTATTTATTCAGTCATCCGTTCTCTACTATCCACCATTGTAGATCTTCATATCTAGAGTTTGCATGGGAAAACCTAGATATATAAGTATTTTGATGATCAATGGATGAGTCGGAAAAAAAATTAGGTGAACTGTTTTGTTGTTTATGTCTGCAGTGCCTTTTGCATGCTATATAGCTTTGTTGCGGGGCTTTGTTTTCTATTTTATCTTCTAGCCTTCATTTTATCTAGTAATTTTTGAACAAATGCCACCTCAGTCCGAGTGTCCTCAGTTGGGTGAAGAATGAATGGTGTGTCTTTTCACTTAAGCTGTAACACTTTCTGCTGTTTACCTTGCTCCAACGGGCTCTTATTACCCATGTAGATGCAGTAGATATTTTGCTGCTTCTATAAGCTCTTTTTCTGTTTGTTTGTGGAGAGTGAGTGGGTGAGTTGTGGCATTGGCTCTGGGTTATTAGAGTTTTGCATGTACAAGTTTGTCAGGAACTAAGTGGAGTTGTGTAGACTTCAGTTTGTTGCAATCAATTTCCTCATCTGTCAGTAAGTGTTTTGTGATTGATATCTAATTTCGTCATGCTCTCAGAATCAAAGGTTGAACCACATTGTTACTGTGTTTTACAGACCGCTGACTGACTTTAATGAAGTTACATTTCACTACCTGGAGTGCATGTATGTTCACGTATACTGTACCAAATTGCAGGTATGCAAAATTTTACCCTGTTTTCTATGGATTCTTGAGTACACTGTTTGATTTTATCTTCTCATTTATATGTTATTGCAGCCAGCTAATGTTTCTACTGATGCTCAAATGATCTCTTCAGTAAATGGCACCCCTTTCAGAGGACACCAGGGTATCCAGCAGAATCAAGTATACTTCGTTGTTACTAAAAAGTCTGATCTTTTGTGATTTCTATGTTTAGTTCTTATTTTCTTCTTTTTTTTCTGCTCAGTTTCCTGGACAGTTTGATGAATTAAGGGGCGTTGACCAAATGGTGATGGAGTATCTGCAGCAACCTGCTAACTTGTGAGTTCATCTTGGATTTTATACCGTCTATTGCCCACTCCATCTTTGCTGTTCAACTTTATTCTGCTTTCTGCATTACAGGTTCGTCTATGTTGTTGTGTAAAATCATACCTAAGTATGTCTGGAAATGACAGAATGGACTGGCTCAGCATTCGAAAAACAAATAAGAGGAGTAATTAATATTTAGTCTCTATGAATTGCCTCTATAGTAGTATAACAACATAGACTGTTTTGGGGGTTATTATTAAAAAGTATATACTGTCTTAAGAATGGACAGTTTGGAGAAACAGCATCGACTGTATGTAGCCTTAAATATCCAAAAGTTTCTTACGTAGTCTAGTTAAATAGTATTAAAAGTTTGGGAGACTGATCAAGGAAGGATATTCTGCCAAGCTTAACATCATGTTCTGCTGGTATTGCCTACAAGTCATAAAACTATAGTTATTGTCTGGCGAAGATGTTTAGAAAAAACTTCTCGTTCTCAGAAGTAGTGTGATCCTTCTATAGAGTGGTTCATAGACAAAAACATTGGTGGACTCTTGGATATGGTACCAAGCCAAAATCATTCACGGAACGTGTGTTTCAAGGTTATCGATCTTTTCTAGAAAGCAAGTTGAAGTGGACGCTTGTTTATGGAGAGAATTTGTGCTATAATTAGTGCTTAATTGTTAATATTTTATTAGAAGGGGTAGGAACACCATGTTATCTCAATTCAGCATGTTGCTCCTAGCATTGAAGTTTGTAGGGTTATGTTGTTTTTCTTCTTAGCTTTTAATATGTGGTTTACTGCTTTCTGTGTGATAGAATAATGGAAGGTTTAAACCTGCCATATCAAGTTTCATGGTTATAATATACGAAGTACTTGTTTATTGCTGATCCATTTGTACTTGTCTGTTTTCAGGGCAAAGACAGTAGGGGTGAATGTTAACGAGATTGCACAGCGATTAAGTATTCCACTTGATAAGATCATGTACTTTTCTCTTTTTTTTTTCGTTTCTTTAACTTTGTTGCTTTCAAACGGAAATTATGATTTTGCCGCCTCTGTAAAATTCTAACATATACATCTCCCTTCATGGGCAACCGACAGGACATCGGTAAAACATCTAGAAGAGGAAGGCTTTGCCTACTCAACGCTCGATGAATACCACTACAAATCAACAGCAAATGCTTGATTACCCTGTTTGCTCACTTCTAAAGGCCGGGTTCCTATTCTAGCTGTCTGAAGACTTAACTTTTTATCTGCATACCGCCTGTAAATTTATTTGTGGTTCATTAATGAGCACCTTTCAAGTTTGAACATAATCCAGATCAAGTTTAGACGAGAATTGTAGAAAAGGATATGGAAAACGTGGAGTTTTAGACGAGAATGTAGATCAATACTGGTAGTTCCATGCGGGTGTCCTAAAATGTTCTTTATATTTTTATTTATACTATCATATTAATGCTTTAATATTCTATCAAAATTTGTGTCCAATAATTATGTTAACCAATTAAATTCATTGGATTTTTTAATCTCT

mRNA sequence

ATGAATTGGAAGCACGAAACGAGCGATGGACCATCGCACGAAGCAATGACCCATCGCTCGACGGGCCGTAGCGCAACGCCTAGCTCGATGGGCCAGCGTGCCAAGCAAGCAAGGCCAGCTGCTGCCCAGCGTGCATGGGCCAGCGCTGTTGCGCCTAGCACACGGGCCATCGCTGTTGTGCCTGTTGCTTGGCCAGCGCGGTTGGGCCTACGCGTGCAAGGCCATAGTTGGTCGGTTTACTTGCTATGCAAGCAGCCTGCCAACCCTAGTGTTTTAGGCTGCGTAAACCGCCTTTTCCCTCTCACTTGTTCAAAATCAATTTCTAGGGTTTCGAATTCTCGCAGTAGTTGCACAATTCATTACTCAATCACATCAGAAATGTTTAACAGCCAATTCGACGGAAACGCCGCCTTCTCCGGTGGCGGTTTCATGCCTTCTCAAGCCACTCAGTCCGCCGACCCTTCCTATTCTACCGCGAAAAATCGTGATGCTCAGGCATTAGTGCCATTGACAGTGAAGCAGATGAATGAAGCTGTTTCAGCTTCCAACGAGAGTGGAACTTTCCTGGTTGACGGTGTTGATGTTAGCAATGTGACACTTGTTGGGTTGGTGTTTAACAAGACTGAAAGGGTTACTGACGTTGGTTTTGTCCTCGATGATGGAACTGGGAGGATTGATGTTCACAGATGGGTTAATGAACCTCACGACTCGAATGAATTGTCAAAGATTATGGATGGTATGTATGTACGTATCTATGCAAGTTTGAAAGGGTTTCATGGTAAAAAGCAATTGACGGCATTTTCTGTCAGACCGCTGACTGACTTTAATGAAGTTACATTTCACTACCTGGAGTGCATGTATGTTCACGTATACTGTACCAAATTGCAGCCAGCTAATGTTTCTACTGATGCTCAAATGATCTCTTCAGTAAATGGCACCCCTTTCAGAGGACACCAGGGTATCCAGCAGAATCAATTTCCTGGACAGTTTGATGAATTAAGGGGCGTTGACCAAATGGTGATGGAGTATCTGCAGCAACCTGCTAACTTGGCAAAGACAGTAGGGGTGAATGTTAACGAGATTGCACAGCGATTAAGTATTCCACTTGATAAGATCATGTACTTTTCTCTTTTTTTTTTCGACATCGGTAAAACATCTAGAAGAGGAAGGCTTTGCCTACTCAACGCTCGATGAATACCACTACAAATCAACAGCAAATGCTTGATTACCCTGTTTGCTCACTTCTAAAGGCCGGGTTCCTATTCTAGCTGTCTGAAGACTTAACTTTTTATCTGCATACCGCCTGTAAATTTATTTGTGGTTCATTAATGAGCACCTTTCAAGTTTGAACATAATCCAGATCAAGTTTAGACGAGAATTGTAGAAAAGGATATGGAAAACGTGGAGTTTTAGACGAGAATGTAGATCAATACTGGTAGTTCCATGCGGGTGTCCTAAAATGTTCTTTATATTTTTATTTATACTATCATATTAATGCTTTAATATTCTATCAAAATTTGTGTCCAATAATTATGTTAACCAATTAAATTCATTGGATTTTTTAATCTCT

Coding sequence (CDS)

ATGAATTGGAAGCACGAAACGAGCGATGGACCATCGCACGAAGCAATGACCCATCGCTCGACGGGCCGTAGCGCAACGCCTAGCTCGATGGGCCAGCGTGCCAAGCAAGCAAGGCCAGCTGCTGCCCAGCGTGCATGGGCCAGCGCTGTTGCGCCTAGCACACGGGCCATCGCTGTTGTGCCTGTTGCTTGGCCAGCGCGGTTGGGCCTACGCGTGCAAGGCCATAGTTGGTCGGTTTACTTGCTATGCAAGCAGCCTGCCAACCCTAGTGTTTTAGGCTGCGTAAACCGCCTTTTCCCTCTCACTTGTTCAAAATCAATTTCTAGGGTTTCGAATTCTCGCAGTAGTTGCACAATTCATTACTCAATCACATCAGAAATGTTTAACAGCCAATTCGACGGAAACGCCGCCTTCTCCGGTGGCGGTTTCATGCCTTCTCAAGCCACTCAGTCCGCCGACCCTTCCTATTCTACCGCGAAAAATCGTGATGCTCAGGCATTAGTGCCATTGACAGTGAAGCAGATGAATGAAGCTGTTTCAGCTTCCAACGAGAGTGGAACTTTCCTGGTTGACGGTGTTGATGTTAGCAATGTGACACTTGTTGGGTTGGTGTTTAACAAGACTGAAAGGGTTACTGACGTTGGTTTTGTCCTCGATGATGGAACTGGGAGGATTGATGTTCACAGATGGGTTAATGAACCTCACGACTCGAATGAATTGTCAAAGATTATGGATGGTATGTATGTACGTATCTATGCAAGTTTGAAAGGGTTTCATGGTAAAAAGCAATTGACGGCATTTTCTGTCAGACCGCTGACTGACTTTAATGAAGTTACATTTCACTACCTGGAGTGCATGTATGTTCACGTATACTGTACCAAATTGCAGCCAGCTAATGTTTCTACTGATGCTCAAATGATCTCTTCAGTAAATGGCACCCCTTTCAGAGGACACCAGGGTATCCAGCAGAATCAATTTCCTGGACAGTTTGATGAATTAAGGGGCGTTGACCAAATGGTGATGGAGTATCTGCAGCAACCTGCTAACTTGGCAAAGACAGTAGGGGTGAATGTTAACGAGATTGCACAGCGATTAAGTATTCCACTTGATAAGATCATGTACTTTTCTCTTTTTTTTTTCGACATCGGTAAAACATCTAGAAGAGGAAGGCTTTGCCTACTCAACGCTCGATGA

Protein sequence

MNWKHETSDGPSHEAMTHRSTGRSATPSSMGQRAKQARPAAAQRAWASAVAPSTRAIAVVPVAWPARLGLRVQGHSWSVYLLCKQPANPSVLGCVNRLFPLTCSKSISRVSNSRSSCTIHYSITSEMFNSQFDGNAAFSGGGFMPSQATQSADPSYSTAKNRDAQALVPLTVKQMNEAVSASNESGTFLVDGVDVSNVTLVGLVFNKTERVTDVGFVLDDGTGRIDVHRWVNEPHDSNELSKIMDGMYVRIYASLKGFHGKKQLTAFSVRPLTDFNEVTFHYLECMYVHVYCTKLQPANVSTDAQMISSVNGTPFRGHQGIQQNQFPGQFDELRGVDQMVMEYLQQPANLAKTVGVNVNEIAQRLSIPLDKIMYFSLFFFDIGKTSRRGRLCLLNAR
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo06181.1Spo06181.1mRNA


Homology
[Close]
BLAST of Spo06181.1 vs. NCBI nr
Match: gi|902229911|gb|KNA21647.1| (hypothetical protein SOVF_041380 [Spinacia oleracea])

HSP 1 Score: 495.0 bits (1273), Expect = 1.300e-136
Identity = 247/247 (100.00%), Postives = 247/247 (100.00%), Query Frame = 1 

		  

Query: 127 MFNSQFDGNAAFSGGGFMPSQATQSADPSYSTAKNRDAQALVPLTVKQMNEAVSASNESG 186
           MFNSQFDGNAAFSGGGFMPSQATQSADPSYSTAKNRDAQALVPLTVKQMNEAVSASNESG
Sbjct: 1   MFNSQFDGNAAFSGGGFMPSQATQSADPSYSTAKNRDAQALVPLTVKQMNEAVSASNESG 60

Query: 187 TFLVDGVDVSNVTLVGLVFNKTERVTDVGFVLDDGTGRIDVHRWVNEPHDSNELSKIMDG 246
           TFLVDGVDVSNVTLVGLVFNKTERVTDVGFVLDDGTGRIDVHRWVNEPHDSNELSKIMDG
Sbjct: 61  TFLVDGVDVSNVTLVGLVFNKTERVTDVGFVLDDGTGRIDVHRWVNEPHDSNELSKIMDG 120

Query: 247 MYVRIYASLKGFHGKKQLTAFSVRPLTDFNEVTFHYLECMYVHVYCTKLQPANVSTDAQM 306
           MYVRIYASLKGFHGKKQLTAFSVRPLTDFNEVTFHYLECMYVHVYCTKLQPANVSTDAQM
Sbjct: 121 MYVRIYASLKGFHGKKQLTAFSVRPLTDFNEVTFHYLECMYVHVYCTKLQPANVSTDAQM 180

Query: 307 ISSVNGTPFRGHQGIQQNQFPGQFDELRGVDQMVMEYLQQPANLAKTVGVNVNEIAQRLS 366
           ISSVNGTPFRGHQGIQQNQFPGQFDELRGVDQMVMEYLQQPANLAKTVGVNVNEIAQRLS
Sbjct: 181 ISSVNGTPFRGHQGIQQNQFPGQFDELRGVDQMVMEYLQQPANLAKTVGVNVNEIAQRLS 240

Query: 367 IPLDKIM 374
           IPLDKIM
Sbjct: 241 IPLDKIM 247
[Close]
BLAST of Spo06181.1 vs. NCBI nr
Match: gi|731354248|ref|XP_010688480.1| (PREDICTED: replication protein A 32 kDa subunit B-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 377.5 bits (968), Expect = 2.900e-101
Identity = 183/247 (74.09%), Postives = 218/247 (88.26%), Query Frame = 1 

		  

Query: 127 MFNSQFDGNAAFSGGGFMPSQATQSADPSYSTAKNRDAQALVPLTVKQMNEAVSASNESG 186
           M +SQFDGNAAFSGGGFMPSQATQSADPS+S AKNRDAQALVPLTVKQ+NEA+ A++E+ 
Sbjct: 1   MHSSQFDGNAAFSGGGFMPSQATQSADPSFSHAKNRDAQALVPLTVKQINEALLATSENA 60

Query: 187 TFLVDGVDVSNVTLVGLVFNKTERVTDVGFVLDDGTGRIDVHRWVNEPHDSNELSKIMDG 246
            F+VDGVDV+NVT+VGLV NK ERVTDVGFVLDDGTGR+DVHRWV+EP DSNE++ I DG
Sbjct: 61  NFVVDGVDVNNVTIVGLVCNKVERVTDVGFVLDDGTGRVDVHRWVHEPFDSNEMATIKDG 120

Query: 247 MYVRIYASLKGFHGKKQLTAFSVRPLTDFNEVTFHYLECMYVHVYCTKLQPANVSTDAQM 306
           MYVR+YA+LKGF GK+QL AF+VRPLTDFNE+++H+LECMYVH+Y TKL+ A+V +DAQM
Sbjct: 121 MYVRVYANLKGFQGKRQLIAFAVRPLTDFNELSYHFLECMYVHMYNTKLKAASVPSDAQM 180

Query: 307 ISSVNGTPFRGHQGIQQNQFPGQFDELRGVDQMVMEYLQQPANLAKTVGVNVNEIAQRLS 366
            SSVNGTPFRG+QG QQNQF G   +L+ +D++VM++LQQPA LA   GV+VNEI QRL 
Sbjct: 181 TSSVNGTPFRGYQGTQQNQFAGPLSDLKDLDKIVMDFLQQPAYLASDTGVHVNEIVQRLG 240

Query: 367 IPLDKIM 374
           IP DKIM
Sbjct: 241 IPRDKIM 247
[Close]
BLAST of Spo06181.1 vs. NCBI nr
Match: gi|720018422|ref|XP_010261781.1| (PREDICTED: replication protein A 32 kDa subunit A [Nelumbo nucifera])

HSP 1 Score: 316.2 bits (809), Expect = 8.000e-83
Identity = 162/254 (63.78%), Postives = 200/254 (78.74%), Query Frame = 1 

		  

Query: 127 MFNSQFDGNAAFSGGGFMPSQATQSADPSYSTAKNRDAQALVPLTVKQMNEAVSASNESG 186
           M  SQFDGNAAFSGGGFMPSQATQ+ D  +S AKNRDAQ L+PLTVKQ++EA  +S+E  
Sbjct: 1   MHASQFDGNAAFSGGGFMPSQATQTTDTGFSPAKNRDAQGLLPLTVKQISEAFHSSDEKS 60

Query: 187 TFLVDGVDVSNVTLVGLVFNKTERVTDVGFVLDDGTGRIDVHRWVNEPHDSNELSKIMDG 246
            F+VDGVDV+NV+LVG++FNK ERVTDVGFVLDDGTGRID HRWVNE  D+ E+  I DG
Sbjct: 61  NFVVDGVDVNNVSLVGMLFNKAERVTDVGFVLDDGTGRIDCHRWVNETIDTKEMEGIQDG 120

Query: 247 MYVRIYASLKGFHGKKQLTAFSVRPLTDFNEVTFHYLECMYVHVYCTKLQPANVSTDAQM 306
           MYV I+  LKGF GK+QL AFSVRP+TDFN++T H+++C+YVH Y TKLQ     T +QM
Sbjct: 121 MYVEIHGHLKGFQGKRQLVAFSVRPVTDFNQITHHFIQCIYVHTYNTKLQKMQGGT-SQM 180

Query: 307 ISSVNGTPFR-GHQGIQ----QNQFPGQF--DELRGVDQMVMEYLQQPANLAKTVGVNVN 366
           ++ V  TP + G +G Q     NQF GQF  D L+G+DQMV++YLQQP+NLA+  GV+ +
Sbjct: 181 VNPVLNTPLQNGSKGYQAAAIPNQFSGQFSSDGLKGIDQMVLDYLQQPSNLAQEKGVHRD 240

Query: 367 EIAQRLSIPLDKIM 374
           EIA++L IPLDKIM
Sbjct: 241 EIARQLKIPLDKIM 253
[Close]
BLAST of Spo06181.1 vs. NCBI nr
Match: gi|359485014|ref|XP_002268721.2| (PREDICTED: replication protein A 32 kDa subunit B isoform X2 [Vitis vinifera])

HSP 1 Score: 311.2 bits (796), Expect = 2.600e-81
Identity = 149/246 (60.57%), Postives = 198/246 (80.49%), Query Frame = 1 

		  

Query: 129 NSQFDGNAAFSGGGFMPSQATQSADPSYSTAKNRDAQALVPLTVKQMNEAVSASNESGTF 188
           +SQFDGNAAFSGGGFMPSQATQ+A+P +S A+NRD QAL+PLTVKQ++EA  +S++   F
Sbjct: 4   HSQFDGNAAFSGGGFMPSQATQAAEPGFSPARNRDTQALLPLTVKQISEAFLSSDDKSNF 63

Query: 189 LVDGVDVSNVTLVGLVFNKTERVTDVGFVLDDGTGRIDVHRWVNEPHDSNELSKIMDGMY 248
           L+DGV+V+NVTLVG+VFNK ERVTDVGF+LDDGTGRID +RWVNE  D+ E+  I+DGMY
Sbjct: 64  LIDGVEVNNVTLVGMVFNKAERVTDVGFMLDDGTGRIDCNRWVNEAVDTKEMEGILDGMY 123

Query: 249 VRIYASLKGFHGKKQLTAFSVRPLTDFNEVTFHYLECMYVHVYCTKLQPANVSTDAQMIS 308
           VR++  LKGF GK+ L  FS+RP+TDFNE+  H++EC+YVH+Y TK + A   T + + +
Sbjct: 124 VRVHGHLKGFQGKRHLNVFSIRPVTDFNEIASHFIECIYVHIYNTKSR-AGGPTQSHVTN 183

Query: 309 SVNGTPFRGHQGIQQNQFPGQFDE-LRGVDQMVMEYLQQPANLAKTVGVNVNEIAQRLSI 368
              GTP +G+Q  Q NQF GQ+   L+GVDQ+V++YLQQP +LA+  GV  +E+AQ+L++
Sbjct: 184 PAIGTPLKGYQASQPNQFSGQYGAGLKGVDQLVIDYLQQPQSLARDQGVGRDELAQQLNV 243

Query: 369 PLDKIM 374
           P+DKIM
Sbjct: 244 PVDKIM 248
[Close]
BLAST of Spo06181.1 vs. NCBI nr
Match: gi|731408404|ref|XP_010656840.1| (PREDICTED: replication protein A 32 kDa subunit A isoform X1 [Vitis vinifera])

HSP 1 Score: 310.8 bits (795), Expect = 3.300e-81
Identity = 149/247 (60.32%), Postives = 198/247 (80.16%), Query Frame = 1 

		  

Query: 129 NSQFDGNAAFSGGGFMPSQATQSADPSYSTAKNRDAQALVPLTVKQMNEAVSASNESGTF 188
           +SQFDGNAAFSGGGFMPSQATQ+A+P +S A+NRD QAL+PLTVKQ++EA  +S++   F
Sbjct: 4   HSQFDGNAAFSGGGFMPSQATQAAEPGFSPARNRDTQALLPLTVKQISEAFLSSDDKSNF 63

Query: 189 LVDGVDVSNVTLVGLVFNKTERVTDVGFVLDDGTGRIDVHRWVNEPHDSNELSKIMDGMY 248
           L+DGV+V+NVTLVG+VFNK ERVTDVGF+LDDGTGRID +RWVNE  D+ E+  I+DGMY
Sbjct: 64  LIDGVEVNNVTLVGMVFNKAERVTDVGFMLDDGTGRIDCNRWVNEAVDTKEMEGILDGMY 123

Query: 249 VRIYASLKGFHGKKQLTAFSVRPLTDFNEVTFHYLECMYVHVYCTKLQ-PANVSTDAQMI 308
           VR++  LKGF GK+ L  FS+RP+TDFNE+  H++EC+YVH+Y TK +  A   T + + 
Sbjct: 124 VRVHGHLKGFQGKRHLNVFSIRPVTDFNEIASHFIECIYVHIYNTKSRVQAGGPTQSHVT 183

Query: 309 SSVNGTPFRGHQGIQQNQFPGQFDE-LRGVDQMVMEYLQQPANLAKTVGVNVNEIAQRLS 368
           +   GTP +G+Q  Q NQF GQ+   L+GVDQ+V++YLQQP +LA+  GV  +E+AQ+L+
Sbjct: 184 NPAIGTPLKGYQASQPNQFSGQYGAGLKGVDQLVIDYLQQPQSLARDQGVGRDELAQQLN 243

Query: 369 IPLDKIM 374
           +P+DKIM
Sbjct: 244 VPVDKIM 250
[Close]
BLAST of Spo06181.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RS78_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_041380 PE=4 SV=1)

HSP 1 Score: 495.0 bits (1273), Expect = 8.700e-137
Identity = 247/247 (100.00%), Postives = 247/247 (100.00%), Query Frame = 1 

		  

Query: 127 MFNSQFDGNAAFSGGGFMPSQATQSADPSYSTAKNRDAQALVPLTVKQMNEAVSASNESG 186
           MFNSQFDGNAAFSGGGFMPSQATQSADPSYSTAKNRDAQALVPLTVKQMNEAVSASNESG
Sbjct: 1   MFNSQFDGNAAFSGGGFMPSQATQSADPSYSTAKNRDAQALVPLTVKQMNEAVSASNESG 60

Query: 187 TFLVDGVDVSNVTLVGLVFNKTERVTDVGFVLDDGTGRIDVHRWVNEPHDSNELSKIMDG 246
           TFLVDGVDVSNVTLVGLVFNKTERVTDVGFVLDDGTGRIDVHRWVNEPHDSNELSKIMDG
Sbjct: 61  TFLVDGVDVSNVTLVGLVFNKTERVTDVGFVLDDGTGRIDVHRWVNEPHDSNELSKIMDG 120

Query: 247 MYVRIYASLKGFHGKKQLTAFSVRPLTDFNEVTFHYLECMYVHVYCTKLQPANVSTDAQM 306
           MYVRIYASLKGFHGKKQLTAFSVRPLTDFNEVTFHYLECMYVHVYCTKLQPANVSTDAQM
Sbjct: 121 MYVRIYASLKGFHGKKQLTAFSVRPLTDFNEVTFHYLECMYVHVYCTKLQPANVSTDAQM 180

Query: 307 ISSVNGTPFRGHQGIQQNQFPGQFDELRGVDQMVMEYLQQPANLAKTVGVNVNEIAQRLS 366
           ISSVNGTPFRGHQGIQQNQFPGQFDELRGVDQMVMEYLQQPANLAKTVGVNVNEIAQRLS
Sbjct: 181 ISSVNGTPFRGHQGIQQNQFPGQFDELRGVDQMVMEYLQQPANLAKTVGVNVNEIAQRLS 240

Query: 367 IPLDKIM 374
           IPLDKIM
Sbjct: 241 IPLDKIM 247
[Close]
BLAST of Spo06181.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BPY0_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g198540 PE=4 SV=1)

HSP 1 Score: 377.5 bits (968), Expect = 2.000e-101
Identity = 183/247 (74.09%), Postives = 218/247 (88.26%), Query Frame = 1 

		  

Query: 127 MFNSQFDGNAAFSGGGFMPSQATQSADPSYSTAKNRDAQALVPLTVKQMNEAVSASNESG 186
           M +SQFDGNAAFSGGGFMPSQATQSADPS+S AKNRDAQALVPLTVKQ+NEA+ A++E+ 
Sbjct: 1   MHSSQFDGNAAFSGGGFMPSQATQSADPSFSHAKNRDAQALVPLTVKQINEALLATSENA 60

Query: 187 TFLVDGVDVSNVTLVGLVFNKTERVTDVGFVLDDGTGRIDVHRWVNEPHDSNELSKIMDG 246
            F+VDGVDV+NVT+VGLV NK ERVTDVGFVLDDGTGR+DVHRWV+EP DSNE++ I DG
Sbjct: 61  NFVVDGVDVNNVTIVGLVCNKVERVTDVGFVLDDGTGRVDVHRWVHEPFDSNEMATIKDG 120

Query: 247 MYVRIYASLKGFHGKKQLTAFSVRPLTDFNEVTFHYLECMYVHVYCTKLQPANVSTDAQM 306
           MYVR+YA+LKGF GK+QL AF+VRPLTDFNE+++H+LECMYVH+Y TKL+ A+V +DAQM
Sbjct: 121 MYVRVYANLKGFQGKRQLIAFAVRPLTDFNELSYHFLECMYVHMYNTKLKAASVPSDAQM 180

Query: 307 ISSVNGTPFRGHQGIQQNQFPGQFDELRGVDQMVMEYLQQPANLAKTVGVNVNEIAQRLS 366
            SSVNGTPFRG+QG QQNQF G   +L+ +D++VM++LQQPA LA   GV+VNEI QRL 
Sbjct: 181 TSSVNGTPFRGYQGTQQNQFAGPLSDLKDLDKIVMDFLQQPAYLASDTGVHVNEIVQRLG 240

Query: 367 IPLDKIM 374
           IP DKIM
Sbjct: 241 IPRDKIM 247
[Close]
BLAST of Spo06181.1 vs. UniProtKB/TrEMBL
Match: D7SQB0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0052g00850 PE=4 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 2.300e-81
Identity = 149/247 (60.32%), Postives = 198/247 (80.16%), Query Frame = 1 

		  

Query: 129 NSQFDGNAAFSGGGFMPSQATQSADPSYSTAKNRDAQALVPLTVKQMNEAVSASNESGTF 188
           +SQFDGNAAFSGGGFMPSQATQ+A+P +S A+NRD QAL+PLTVKQ++EA  +S++   F
Sbjct: 4   HSQFDGNAAFSGGGFMPSQATQAAEPGFSPARNRDTQALLPLTVKQISEAFLSSDDKSNF 63

Query: 189 LVDGVDVSNVTLVGLVFNKTERVTDVGFVLDDGTGRIDVHRWVNEPHDSNELSKIMDGMY 248
           L+DGV+V+NVTLVG+VFNK ERVTDVGF+LDDGTGRID +RWVNE  D+ E+  I+DGMY
Sbjct: 64  LIDGVEVNNVTLVGMVFNKAERVTDVGFMLDDGTGRIDCNRWVNEAVDTKEMEGILDGMY 123

Query: 249 VRIYASLKGFHGKKQLTAFSVRPLTDFNEVTFHYLECMYVHVYCTKLQ-PANVSTDAQMI 308
           VR++  LKGF GK+ L  FS+RP+TDFNE+  H++EC+YVH+Y TK +  A   T + + 
Sbjct: 124 VRVHGHLKGFQGKRHLNVFSIRPVTDFNEIASHFIECIYVHIYNTKSRVQAGGPTQSHVT 183

Query: 309 SSVNGTPFRGHQGIQQNQFPGQFDE-LRGVDQMVMEYLQQPANLAKTVGVNVNEIAQRLS 368
           +   GTP +G+Q  Q NQF GQ+   L+GVDQ+V++YLQQP +LA+  GV  +E+AQ+L+
Sbjct: 184 NPAIGTPLKGYQASQPNQFSGQYGAGLKGVDQLVIDYLQQPQSLARDQGVGRDELAQQLN 243

Query: 369 IPLDKIM 374
           +P+DKIM
Sbjct: 244 VPVDKIM 250
[Close]
BLAST of Spo06181.1 vs. UniProtKB/TrEMBL
Match: M1CQ28_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400028143 PE=4 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 1.800e-73
Identity = 143/248 (57.66%), Postives = 189/248 (76.21%), Query Frame = 1 

		  

Query: 129 NSQFDGNAAFSGGGFMPSQATQSA-DPSYSTAKNRDAQALVPLTVKQMNEAVSASNESGT 188
           N+QFDGNAAFSGGGFMPSQATQ+A D S+S AKNRD+Q L+PLTVKQ++EA  +S++   
Sbjct: 5   NNQFDGNAAFSGGGFMPSQATQTAGDHSFSPAKNRDSQTLIPLTVKQISEAFQSSDDKTN 64

Query: 189 FLVDGVDVSNVTLVGLVFNKTERVTDVGFVLDDGTGRIDVHRWVNEPHDSNELSKIMDGM 248
           FL+DGVDV+NV LVG++ NK ERVTDV FV+DDGTGR+D  RWVNE  D+ E+  + +GM
Sbjct: 65  FLIDGVDVNNVKLVGILCNKMERVTDVSFVVDDGTGRLDCFRWVNEAVDTKEMEAVTNGM 124

Query: 249 YVRIYASLKGFHGKKQLTAFSVRPLTDFNEVTFHYLECMYVHVYCTKL--QPANVSTDAQ 308
           YVR++  LKGFHGKKQL A+SVRP+ D+NE+ +H+ + +YVH Y + L  Q  + S  AQ
Sbjct: 125 YVRVHGHLKGFHGKKQLMAYSVRPVDDYNEIAYHFAQVIYVHSYNSSLRKQHDSSSMPAQ 184

Query: 309 MISSVNGTPFRGHQGIQQNQFPG-QFDELRGVDQMVMEYLQQPANLAKTVGVNVNEIAQR 368
           + SS   TP +G+Q    NQFPG   D +RGVD+MV+++LQQP+ LA   GV+ NE+ Q+
Sbjct: 185 VPSSAFNTPLKGYQASASNQFPGYSMDGIRGVDKMVLDFLQQPSCLALEKGVHRNELVQQ 244

Query: 369 LSIPLDKI 373
           L +P +KI
Sbjct: 245 LQLPSEKI 252
[Close]
BLAST of Spo06181.1 vs. UniProtKB/TrEMBL
Match: A0A103YMI1_CYNCS (Nucleic acid-binding, OB-fold OS=Cynara cardunculus var. scolymus GN=Ccrd_009772 PE=4 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 2.300e-73
Identity = 148/260 (56.92%), Postives = 196/260 (75.38%), Query Frame = 1 

		  

Query: 126 EMFNSQFDGNAAFSGGGFMPSQATQSADPSYST-AKNRDAQALVPLTVKQMNEAVSASNE 185
           +M+ SQFDG AAFSGGGFMPSQATQ+ADPS S  +KNRD Q LVPLTVKQ+++A+ ++++
Sbjct: 31  KMYASQFDGAAAFSGGGFMPSQATQTADPSPSVFSKNRDTQTLVPLTVKQISKALLSNDD 90

Query: 186 SGTFLVDGVDVSNVTLVGLVFNKTERVTDVGFVLDDGTGRIDVHRW------VNEPHDSN 245
              FL+DGVDV+NV LVG++FNK ERVTD+ FVLDDGTGRID +RW      V+EP D+ 
Sbjct: 91  KVNFLIDGVDVNNVKLVGMIFNKAERVTDISFVLDDGTGRIDCNRWYQSFIVVHEPVDTK 150

Query: 246 ELSKIMDGMYVRIYASLKGFHGKKQLTAFSVRPLTDFNEVTFHYLECMYVHVY---CTKL 305
           E+  ++DGMYVR++  LKGF GKKQL  F ++PLTDF+E+T H++EC+YVH Y    TKL
Sbjct: 151 EMEAMVDGMYVRVHGQLKGFQGKKQLVVFGIKPLTDFDEITHHFVECIYVHSYNTKLTKL 210

Query: 306 QPANVSTDAQMISSVNGTPFRGHQGIQQNQFPGQF--DELRGVDQMVMEYLQQPANLAKT 365
           QP++ S  A M SS   T  + +Q    NQF GQ+  D LRG+D+MV++YLQ P +LA+ 
Sbjct: 211 QPSS-SNQAHMPSSAVST--QSYQTAPSNQFTGQYVADGLRGIDKMVLDYLQLPGSLARE 270

Query: 366 VGVNVNEIAQRLSIPLDKIM 374
            GV+  E+ ++L IPLDKI+
Sbjct: 271 SGVHQEELVKQLGIPLDKIL 287
[Close]
BLAST of Spo06181.1 vs. ExPASy Swiss-Prot
Match: RFA2B_ARATH (Replication protein A 32 kDa subunit B OS=Arabidopsis thaliana GN=RPA2B PE=2 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 2.000e-57
Identity = 118/249 (47.39%), Postives = 160/249 (64.26%), Query Frame = 1 

		  

Query: 127 MFNSQFDGNAAFSGGGFMPSQATQSADPSYSTAKNRDAQALVPLTVKQMNEAVSASNESG 186
           M+   FDGNAAF+GGGFMPSQAT  A  S S+ KNRD + L+PLT+KQ++ A S + ES 
Sbjct: 1   MYGGDFDGNAAFAGGGFMPSQATTQAHESSSSLKNRDVRTLLPLTLKQLSSA-STTGESN 60

Query: 187 TFLVDGVDVSNVTLVGLVFNKTERVTDVGFVLDDGTGRIDVHRWVNEPHDSNELSKIMDG 246
            F +DGVD+  V +VG +     R+T V FV+DDGTG +D  RW +   ++ E+  +  G
Sbjct: 61  -FSIDGVDIKTVVIVGRISRMENRITQVDFVVDDGTGWVDCVRWCHARQETEEMEAVKLG 120

Query: 247 MYVRIYASLKGFHGKKQLTAFSVRPLTDFNEVTFHYLECMYVHVYCTKLQPANVSTDA-- 306
           MYVR++  LK F GK+ +  FSVRP+TDFNE+  H+ ECMYVH+Y TKL+  +++ D   
Sbjct: 121 MYVRLHGHLKIFQGKRSVNVFSVRPVTDFNEIVHHFTECMYVHMYNTKLRGGSITQDTAT 180

Query: 307 ---QMISSVNGTPFRGHQGIQQNQFPGQF-DELRGVDQMVMEYLQQPANLAKTVGVNVNE 366
              QM  S   TP + +Q    NQFP QF D + GV Q V+ YL QP ++    GV+ + 
Sbjct: 181 PRPQMPYSTMPTPAKPYQTGPSNQFPNQFNDSMHGVKQTVLNYLNQPMHIVSEAGVHCDI 240

Query: 367 IAQRLSIPL 370
           IA+ L IPL
Sbjct: 241 IARELRIPL 247
[Close]
BLAST of Spo06181.1 vs. ExPASy Swiss-Prot
Match: RFA2A_ARATH (Replication protein A 32 kDa subunit A OS=Arabidopsis thaliana GN=RPA2A PE=1 SV=2)

HSP 1 Score: 214.5 bits (545), Expect = 2.000e-54
Identity = 117/253 (46.25%), Postives = 165/253 (65.22%), Query Frame = 1 

		  

Query: 129 NSQFDGNAAFSGGGFMPSQATQSADPSYSTAKNRDAQALVPLTVKQMNEAVSASNESGTF 188
           +SQF+ N+ FSGGGFM SQ +Q+ + S STAKNRD Q LVP+TVKQ+ E   +S E    
Sbjct: 4   SSQFEPNSGFSGGGFMSSQPSQAYESSSSTAKNRDFQGLVPVTVKQITECFQSSGEKSGL 63

Query: 189 LVDGVDVSNVTLVGLVFNKTE-RVTDVGFVLDDGTGRIDVHRWVNEPHDSNELSKIMDGM 248
           +++G+ ++NV+LVGLV +K E +VT+V F LDDGTGRID  RWV+E  D+ E+  + DG 
Sbjct: 64  VINGISLTNVSLVGLVCDKDESKVTEVRFTLDDGTGRIDCKRWVSETFDAREMESVRDGT 123

Query: 249 YVRIYASLKGFHGKKQLTAFSVRPLTDFNEVTFHYLECMYVHVYCTKLQPANVSTDAQMI 308
           YVR+   LK F GK QL  FSVRP+ DFNEVTFHY+EC++ +   ++ Q   V    Q  
Sbjct: 124 YVRLSGHLKTFQGKTQLLVFSVRPIMDFNEVTFHYIECIHFYSQNSESQRQQVGDVTQ-- 183

Query: 309 SSVNGTPFRGHQGIQQ--------NQFPGQFDELRGVDQMVMEYLQQPANLAKTVGVNVN 368
            SVN T F+G     Q        +      +  + +D M+++YL+QPA  A+  G++++
Sbjct: 184 -SVN-TTFQGGSNTNQATLLNPVVSSQNNDGNGRKNLDDMILDYLKQPACTARQQGIHID 243

Query: 369 EIAQRLSIPLDKI 373
           EIAQ+L IP +K+
Sbjct: 244 EIAQQLKIPKNKL 252
[Close]
BLAST of Spo06181.1 vs. ExPASy Swiss-Prot
Match: RFA2B_ORYSJ (Replication protein A 32 kDa subunit B OS=Oryza sativa subsp. japonica GN=RPA2B PE=1 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 1.400e-42
Identity = 101/265 (38.11%), Postives = 154/265 (58.11%), Query Frame = 1 

		  

Query: 134 GNAA--FSGGGFMPSQATQSADPSYSTA----KNRDAQALVPLTVKQMNEAVSASNESGT 193
           GNA+  F GGGFMPSQAT +A+ +        K+R+AQAL+PLTVKQ+ +A   +++   
Sbjct: 19  GNASSLFGGGGFMPSQATNAAEGTSGGGGGFPKSRNAQALLPLTVKQIMDASQTNDDKSN 78

Query: 194 FLVDGVDVSNVTLVGLVFNKTERVTDVGFVLDDGTGRIDVHRWVNEPHDSNELSKIMDGM 253
           F V+G++VS V LVG + NK +RVTDV F LDDGTGR+ V+RW N+  D+ E++ I +G 
Sbjct: 79  FAVNGMEVSTVRLVGRMLNKLDRVTDVSFTLDDGTGRVPVNRWENDSTDTKEMADIQNGD 138

Query: 254 YVRIYASLKGFHGKKQLTAFSVRPLTDFNEVTFHYLECMYVHVYCTKLQPANVSTDAQMI 313
           YV +   LKGF GK+Q+ A+SVR +T+FN+VT H+L C++VH+  T+  P +        
Sbjct: 139 YVIVNGGLKGFQGKRQVVAYSVRRITNFNDVTHHFLHCVHVHLELTR--PKSQVNANTAT 198

Query: 314 SSVNGTPFRGHQGIQQNQFPGQFDEL---------RGVDQMVMEYLQQPANLAKTVGVNV 373
            + N T  R      Q+    Q               +  +V+     PA +    GV V
Sbjct: 199 GTPNQTMPRDSMAYNQSPLTNQASTFSAPQNTGTGTNMIDLVLNVFHDPAVMNDDHGVGV 258

Query: 374 NEIAQRLSIPLDKIMYFSLFFFDIG 384
           + +++RL++P + +    +   D+G
Sbjct: 259 DYVSRRLNLPEETVGKIIIDQVDLG 281
[Close]
BLAST of Spo06181.1 vs. ExPASy Swiss-Prot
Match: RFA2A_ORYSJ (Replication protein A 32 kDa subunit A OS=Oryza sativa subsp. japonica GN=RPA2A PE=1 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 3.400e-41
Identity = 104/256 (40.62%), Postives = 151/256 (58.98%), Query Frame = 1 

		  

Query: 143 FMPSQATQS---ADPSYSTAKNRDAQALVPLTVKQMNEAVSA--SNESGT-FLVDGVDVS 202
           F PSQ T S   A  S + +K+R A + +PLTVKQ++EA  +  + E G  F+VDGV+ +
Sbjct: 10  FSPSQFTSSQNAAADSTTPSKSRGASSTMPLTVKQISEAQQSGITGEKGAPFVVDGVETA 69

Query: 203 NVTLVGLVFNKTERVTDVGFVLDDGTGRIDVHRWVNEPHDSNELSKIMDGMYVRIYASLK 262
           NV LVGLV  KTER TDV F +DDGTGR+D  RWVN+  DS E + + +GMYV +  SLK
Sbjct: 70  NVRLVGLVSGKTERNTDVSFTIDDGTGRLDFIRWVNDGADSAETAAVQNGMYVSVIGSLK 129

Query: 263 GFHGKKQLTAFSVRPLTDFNEVTFHYLECMYVHVYCTKLQ---PANVSTDAQMISSVNGT 322
           G   +K+ TAF++RP+TD+NEVT H+++C+ +H+  TK Q   PA   +     SS   +
Sbjct: 130 GLQERKRATAFAIRPVTDYNEVTLHFIQCVRMHLENTKSQIGSPAKTYSAMGSSSSNGFS 189

Query: 323 PFRGHQGIQQNQFP------GQFDELRGVDQMVMEYLQQPANLAKTVGVNVNEIAQRLSI 382
                  ++ N  P      G   +L   +  V+   ++PAN+    GV+++EI +R  +
Sbjct: 190 EMTTPTSVKSNPAPVLSVTNGSKTDL---NTEVLNVFREPANVESEHGVHIDEIVKRFRL 249

Query: 383 PLDKIMYFSLFFFDIG 384
           P  KI     +  DIG
Sbjct: 250 PEAKIKVAIDYLADIG 262
[Close]
BLAST of Spo06181.1 vs. ExPASy Swiss-Prot
Match: RFA2C_ORYSJ (Replication protein A 32 kDa subunit C OS=Oryza sativa subsp. japonica GN=RPA2C PE=1 SV=2)

HSP 1 Score: 119.4 bits (298), Expect = 8.900e-26
Identity = 66/171 (38.60%), Postives = 99/171 (57.89%), Query Frame = 1 

		  

Query: 138 FSGGGFMPSQATQSADPSYSTA-----------KNRDAQ--ALVPLTVKQMNEAVSASNE 197
           FSG   MPSQ + +  P YS A           K RD +    VP TV  ++ + +A+  
Sbjct: 8   FSGTALMPSQRSGAPAPEYSAAGTGAAAAPSPSKPRDPRFSGCVPATVLHISRSFAAALA 67

Query: 198 SG-----TFLVDGVDVSNVTLVGLVFNKTERVTDVGFVLDDGTGRIDVHRWVNEPHDSNE 257
           +       F +DGV+ +NV ++G V +   R TDV F LDD TG+I + RW+ +  D+ +
Sbjct: 68  ADGGGDPVFSIDGVETTNVRVLGRVVSVVSRDTDVCFTLDDSTGKIPLVRWITDQSDTRD 127

Query: 258 LSKIMDGMYVRIYASLKGFHGKKQLTAFSVRPLTDFNEVTFHYLECMYVHV 291
            S I +G+YV++  +L GF  KKQ  A S+RP+ +FNEV  H++ECM+VH+
Sbjct: 128 TSYIQEGVYVKVQVNLMGFQAKKQGLARSIRPINNFNEVVLHFIECMHVHL 178
[Close]
BLAST of Spo06181.1 vs. TAIR (Arabidopsis)
Match: AT2G24490.1 (replicon protein A2)

HSP 1 Score: 214.5 bits (545), Expect = 1.200e-55
Identity = 117/253 (46.25%), Postives = 165/253 (65.22%), Query Frame = 1 

		  

Query: 129 NSQFDGNAAFSGGGFMPSQATQSADPSYSTAKNRDAQALVPLTVKQMNEAVSASNESGTF 188
           +SQF+ N+ FSGGGFM SQ +Q+ + S STAKNRD Q LVP+TVKQ+ E   +S E    
Sbjct: 4   SSQFEPNSGFSGGGFMSSQPSQAYESSSSTAKNRDFQGLVPVTVKQITECFQSSGEKSGL 63

Query: 189 LVDGVDVSNVTLVGLVFNKTE-RVTDVGFVLDDGTGRIDVHRWVNEPHDSNELSKIMDGM 248
           +++G+ ++NV+LVGLV +K E +VT+V F LDDGTGRID  RWV+E  D+ E+  + DG 
Sbjct: 64  VINGISLTNVSLVGLVCDKDESKVTEVRFTLDDGTGRIDCKRWVSETFDAREMESVRDGT 123

Query: 249 YVRIYASLKGFHGKKQLTAFSVRPLTDFNEVTFHYLECMYVHVYCTKLQPANVSTDAQMI 308
           YVR+   LK F GK QL  FSVRP+ DFNEVTFHY+EC++ +   ++ Q   V    Q  
Sbjct: 124 YVRLSGHLKTFQGKTQLLVFSVRPIMDFNEVTFHYIECIHFYSQNSESQRQQVGDVTQ-- 183

Query: 309 SSVNGTPFRGHQGIQQ--------NQFPGQFDELRGVDQMVMEYLQQPANLAKTVGVNVN 368
            SVN T F+G     Q        +      +  + +D M+++YL+QPA  A+  G++++
Sbjct: 184 -SVN-TTFQGGSNTNQATLLNPVVSSQNNDGNGRKNLDDMILDYLKQPACTARQQGIHID 243

Query: 369 EIAQRLSIPLDKI 373
           EIAQ+L IP +K+
Sbjct: 244 EIAQQLKIPKNKL 252
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BLAST of Spo06181.1 vs. TAIR (Arabidopsis)
Match: AT3G02920.2 (Replication protein A, subunit RPA32)

HSP 1 Score: 212.6 bits (540), Expect = 4.400e-55
Identity = 118/269 (43.87%), Postives = 160/269 (59.48%), Query Frame = 1 

		  

Query: 127 MFNSQFDGNAAFSGGGFMPSQATQSADPSYSTAK--------------------NRDAQA 186
           M+   FDGNAAF+GGGFMPSQAT  A  S S+ K                    NRD + 
Sbjct: 1   MYGGDFDGNAAFAGGGFMPSQATTQAHESSSSLKVYVSDSRRFSGISAAKSSIRNRDVRT 60

Query: 187 LVPLTVKQMNEAVSASNESGTFLVDGVDVSNVTLVGLVFNKTERVTDVGFVLDDGTGRID 246
           L+PLT+KQ++ A S + ES  F +DGVD+  V +VG +     R+T V FV+DDGTG +D
Sbjct: 61  LLPLTLKQLSSA-STTGESN-FSIDGVDIKTVVIVGRISRMENRITQVDFVVDDGTGWVD 120

Query: 247 VHRWVNEPHDSNELSKIMDGMYVRIYASLKGFHGKKQLTAFSVRPLTDFNEVTFHYLECM 306
             RW +   ++ E+  +  GMYVR++  LK F GK+ +  FSVRP+TDFNE+  H+ ECM
Sbjct: 121 CVRWCHARQETEEMEAVKLGMYVRLHGHLKIFQGKRSVNVFSVRPVTDFNEIVHHFTECM 180

Query: 307 YVHVYCTKLQPANVSTDA-----QMISSVNGTPFRGHQGIQQNQFPGQF-DELRGVDQMV 366
           YVH+Y TKL+  +++ D      QM  S   TP + +Q    NQFP QF D + GV Q V
Sbjct: 181 YVHMYNTKLRGGSITQDTATPRPQMPYSTMPTPAKPYQTGPSNQFPNQFNDSMHGVKQTV 240

Query: 367 MEYLQQPANLAKTVGVNVNEIAQRLSIPL 370
           + YL QP ++    GV+ + IA+ L IPL
Sbjct: 241 LNYLNQPMHIVSEAGVHCDIIARELRIPL 267
The following BLAST results are available for this feature:
BLAST of Spo06181.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902229911|gb|KNA21647.1|1.3e-136100.hypothetical protein SOVF_0413... [more]
gi|731354248|ref|XP_010688480.1|2.9e-10174.0PREDICTED: replication protein... [more]
gi|720018422|ref|XP_010261781.1|8.0e-8363.7PREDICTED: replication protein... [more]
gi|359485014|ref|XP_002268721.2|2.6e-8160.5PREDICTED: replication protein... [more]
gi|731408404|ref|XP_010656840.1|3.3e-8160.3PREDICTED: replication protein... [more]
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BLAST of Spo06181.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RS78_SPIOL8.7e-137100.Uncharacterized protein OS=Spi... [more]
A0A0J8BPY0_BETVU2.0e-10174.0Uncharacterized protein OS=Bet... [more]
D7SQB0_VITVI2.3e-8160.3Putative uncharacterized prote... [more]
M1CQ28_SOLTU1.8e-7357.6Uncharacterized protein OS=Sol... [more]
A0A103YMI1_CYNCS2.3e-7356.9Nucleic acid-binding, OB-fold ... [more]
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BLAST of Spo06181.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
RFA2B_ARATH2.0e-5747.3Replication protein A 32 kDa s... [more]
RFA2A_ARATH2.0e-5446.2Replication protein A 32 kDa s... [more]
RFA2B_ORYSJ1.4e-4238.1Replication protein A 32 kDa s... [more]
RFA2A_ORYSJ3.4e-4140.6Replication protein A 32 kDa s... [more]
RFA2C_ORYSJ8.9e-2638.6Replication protein A 32 kDa s... [more]
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BLAST of Spo06181.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2
Match NameE-valueIdentityDescription
AT2G24490.11.2e-5546.2replicon protein A2[more]
AT3G02920.24.4e-5543.8Replication protein A, subunit... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012340Nucleic acid-binding, OB-foldGENE3D2.40.50.140coord: 163..294
score: 1.8
IPR012340Nucleic acid-binding, OB-foldunknownSSF50249Nucleic acid-binding proteinscoord: 167..294
score: 1.31
IPR014892Replication protein A, C-terminalPFAMPF08784RPA_Ccoord: 289..372
score: 6.
NoneNo IPR availablePANTHERPTHR13989REPLICATION PROTEIN A-RELATEDcoord: 102..373
score: 6.8
NoneNo IPR availablePANTHERPTHR13989:SF20REPLICATION PROTEIN A 32 KDA SUBUNIT Bcoord: 102..373
score: 6.8

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006310 DNA recombination
biological_process GO:0006228 UTP biosynthetic process
biological_process GO:0010389 regulation of G2/M transition of mitotic cell cycle
biological_process GO:0009909 regulation of flower development
biological_process GO:0006275 regulation of DNA replication
biological_process GO:0051567 histone H3-K9 methylation
biological_process GO:0006268 DNA unwinding involved in DNA replication
biological_process GO:0006270 DNA replication initiation
biological_process GO:0006306 DNA methylation
biological_process GO:0000911 cytokinesis by cell plate formation
biological_process GO:0008283 cell proliferation
biological_process GO:0006281 DNA repair
biological_process GO:0016567 protein ubiquitination
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0001510 RNA methylation
biological_process GO:0009585 red, far-red light phototransduction
biological_process GO:0006183 GTP biosynthetic process
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
biological_process GO:0006206 pyrimidine nucleobase metabolic process
biological_process GO:0006241 CTP biosynthetic process
biological_process GO:0006260 DNA replication
biological_process GO:0006144 purine nucleobase metabolic process
biological_process GO:0006165 nucleoside diphosphate phosphorylation
cellular_component GO:0022625 cytosolic large ribosomal subunit
cellular_component GO:0005730 nucleolus
cellular_component GO:0046809 replication compartment
cellular_component GO:0000785 chromatin
cellular_component GO:0005743 mitochondrial inner membrane
cellular_component GO:0042555 MCM complex
cellular_component GO:0005657 replication fork
cellular_component GO:0005840 ribosome
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005634 nucleus
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003682 chromatin binding
molecular_function GO:0003678 DNA helicase activity
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0003677 DNA binding
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0005515 protein binding
molecular_function GO:0004550 nucleoside diphosphate kinase activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0005524 ATP binding
molecular_function GO:0003688 DNA replication origin binding
RNA-Seq Expression