Spo06170 (gene)

Overview
NameSpo06170
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
Locationchr2 : 42452107 .. 42459116 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAATGCCGTCTTCTCCAGAAGAACCCGTTGCACCACTAACAGTGCCTTGGGAGGTTTGGGTTCTTCACATGATCCATTTTTTAGGAAATAACTCGATGTATGCCACCAAATTCATACTAATATGGCCCTGTTTTGTTCACCTTATTTCCACTTATTTCAGAAAAAATAAGTTCAGTTAAGTTCAGATAAGATAAGTTCAGGAAAAATAAGGGTTGACCAAGAACAACATATAAGTGAAATAAGTTTTGACAAGTTTTAATAAGTTCAGTTAAGTTCAGATAAGTTCAGATAAGATAAGTTCAGAAAAAACAAGTGAAAATCAGGTGAATAGAACGGAGAATCTCAAAAAAACCACAAAATGTATAGAAAGATGGAATACAACCACCACAATATCCATGAATTCCCTAGCTAAGATTGATCTACTTTCCTGAAGAAATCCATGAGACGATCATAAACGAATTCCTTAGCATTCATAGCCAGTACATAATCAGCATGCGCGTAGTCTTCTATGAAATGAAGGAAAAACTTGTCCCTATCATGATTTTTAAGGTTATCAAGCAGGAACTTGACATCGTCAACATCAGCAAGCTCATCCCTTCCTCCATGAGCAATGAACAACGGGAGGTTGTTTGGAATATTTGTCAGGTCATATTCCGGGGGCTTAGCTTGTCCGTACTGTTCCTTGTTCTTGTTTGGGTCTAGATAATCATACCTTGCTATTGTTCCGTCTCTTGCCACTGTTAATCCATAAACAACAATTACTATTATCACCTAAAAGCATTAAAGTTTATAAGGAGGCACATACTTTGGGAATAATGGATCATGTTTTTAGTAGCGGTTGACTGAGGTTCGTGCTGCAAAAATGTAGAAACCGTTGATGTACTCAAGCAACAGTTTACACCTACATCATTCGCAATTTATGTTAGTCCGTATAATTGATAAAAATTCACCACCAGCTTTGAAAATCAGTTAGCTTAATTTAATACCAGTAAAAGACGTCAAAAAATCAGTGCAGTCAATTCCCTGCTTCCTGCATATTTCTTTAAGAAGCGTCATTACAGCCTCTCTGTTCAATGACAAACAGAAAAGAAAACAAATCTCATTCTGGTTAAACCAGATACCCAAAACATGCACATCATAATCAGGTGTGTTGTGTTACTTGACAATAACAGAAGGAATATATCATTATTTCTAGTTTCTACCTGCTGGCTAATACCTAAACAATACGGTGTAATTCAGAATTGCCAAAAATAGGGAATTGAGAAAATCCAAAGCTTTTCTGAAGCCCAGTACAACAGAGAATTTAGAGAGTGGTTTCTCACCCACGCGGTACAAATTCATGTAGTCCAGACCAGTACATAAACTGTTGACAAGGGAAAATTTACACATTAAGTATTCGGTAATATGACTCAGAGAAAGAGAAAAAGGAAAGGATATGATGTCTTTACTTCAGTTACAAAGTTTTCAGCAGCATTTTTAGCAAGCGGGGAGGTCATTCGACTAAGATAAGCAATTGGACAGAGCAAGCCGGCTGATTTCACCATGTTCAACAACTTCTGCTGGGAAAATGCAGTCAGGGCTATTAATGTTCCCTGCATTTATAAACTGATTTAGTACTTGCTAATTATCATGAGAGTAACAAGGAAACTGGGAATAAGGAATTGTGAATGAGCAGTAATAATATTCAGCACTTTTTACCTGTGAATGTCCAACATAATGCAGCTTCTGTTCACCAGATTGATTGTACACATATTGGACTATTTCTGGAAGATCATATTCCATCAGCTCATCCCATGACCAATCCCAATATGCCTAGAAAATTATTGATGCATCAAACTAGACAATTTGATATAATCTCACATGTCTATATATATTCCTAATAGATCACCCTATTCAGTAACAAAATTTGACAATGAAAGAGTGCAGGTTTTTGGCAATGGAAAAGAGAGATTACCGAGTCATTAAAGCTTAGTGTCATATGGCCGAGGCTATATTTGGTGCCACGGGAGTTGGCAACCCAAACATCAAAACCACTGTCTGCTAAAATGAATGCCAAGGATTGATCTGGAGGATTAAGCAGCCATGTGACTCCATCCTACATCCCAAACAAAAACAAAAAGAAAAAGAAAAAGATGGTGAAGAAAATAGTAATCCCTCCATCCCACAAAATATAGTGCCTGTTTTCCATTTTGGGTGTCCCAAAATGTTGTGCCTGTTTTTTCATTTTGGGTGTCCCAAAATGTTGTGCCTGTTTTCCATTTTGGGTGTCCCAAAATGTTGTGCCTGTTTTCCATTTTGGGTGTCCCAAAATGTTGTGCCTGTTTTCCATTTTGTTTATACCTAGAAAATAGCGTGGTCCTATCATTAATGTTTCTATCATGAAAATGTTGTCCCATAATTTATTAGTTTTTGTCTTTTTGTTTAAAAAATACGGAGTAAAATAAATTGTGTACTTTTCTACTAAAACAATAACATTAATAGTTCATCATGTTATTTTTCAAGTTTCTTAATTCCCGTGAAAAAAGGTCAAACGGGCACTATATTATGGGACGGAGGGAGTATACGTTACGTGACTATAGATTTCAGAGAAACAGTGTATAATACTAACCATTAAAACACCATGCTGCAAAAGCACTGGTGGCTTGCTGTCTTCAAGTGTATAGTTTGTCAAGCCTGTTGGAATTCGTTGCAAGCTGAGAATATAACCATCTTTTGTTGTCACCTGAATCTCTCCAACAACAGCATTTTAGTTAACCAACTAAGATTAAAGAGATACAGACAAAAAAAAACGGTTTAATTTAAGAAGAAGAGTGTGCAGATTAACTGTGTGCTCCTCGCAGACATAGCCGCGTGACTCCACCAACAATTTACAGATGCCTTCATCAGAAGTTAATTGACCACGAGTCTGTGTGGAAATCAGCCTTGTTTTAACTCCAATTATTTCATGAAAGAAGAAGAATACTAGCACAACTGAGCTCAGAATTCCAGTCATTTTCATAAACATAAAGAATGCTTCCTATTCAGTTCACTACTGAAACAGACTCTTGTATTTCTGGTAAGAAAGCTATAAACTATAGCAAGAGAATCCAGCATGTGATACATAAAACAATATGGAACTTTTGTCTATAAGTGAAATGGTGGATCAAGTTTCTTAACCAAAACAAATATGGCACATAGTATTACAAAAGTTTGGATGATTGATTTCTTGTTCTATGAACCATGTAAAATGGGAAACAGACTTCTGAACATTTATTCACCTGAAACCTAAATATTAGCCGCACATAAAATCGAAAATGGTCAAAGTGAACAATGGATCTCATGGTGTTACATTCACCATTATACTCTTTTGTTGGAGATATTCCTTGAGAGGAGTAAAAACACAACTAAGGCCAATAAAAGCTGCGCGAAAATGAGAAGACGAAGAGGATACAAATTACAAAGAGCAAAAGATACATTCAAATAGTAGGTACAATTTTTTATATATGCATTATTCCTTGATTCAATGAAAAATTTGTATAGGCCTATGTGTAAGACCTATACATACAATTCTTAGCATGAATTTCGTACTTCTATACTAGGGGCTGCTGCTGCTCTATCTTTTGATTCTTTTTGTAATGCTTCCGAACTTTTAACTGAATCTTTAGACGATTTGTTTCTCAGTAATGGTATTCTAATGGACTGGAGATTTGGCCTTTTTAAGAAATGCAATCTCCATCTTCTGGGTTTGACCTGTCCTAGTAACTTCATCTGCTCCCTCCTGAATTTTCTGTTTGTGTACCATTTTCCACCTCGCCATCCCAAGGCATACCTGCATCAGCAAAAGAGTCATAAGAAACTTGCCCGAATGTCAAGCAAAGCAACACATAAATTATTAGCCTTATGATTAAAGGTAGAGAAAAGTTTGTGAAGGTGTCTAGAGGCTACCTTATAAATTATACTCCTTATTTTCCAGTTTTATTAGAAGTACGAGTGGAGATAAGAATAGTAATAAAATGTCATCAATACTAAGTATTCGCTATTGACAGAAGAATACACATAGGATCAACTATGACTTATCGAACATACGAGGCCAATCGAAAGGATATGCCATTTTTCATGAAATACGCAGATGAAAGTGTTTTATATAATGATACGAGAGAACAAACCAAAATTTATAAATTTGGAATTTATGAGTTTTAAGTTGATCTCAAACAAATTGGGCTGCATGAATAAAATAATAACTTCATAGGAGATAGGTCGATAGGGATGCCTTCAGATACAGTTACGCGTTCAGTACTAAGGAGAATATCATAAACCAAAAAAGATATAGCAGGTAAACTCAGGATAATTGATACAGAACTTATTAAGGAGAAATGAATTTGCCAGAATCTCTCTGTGAGAAGAAGATTTTTGTATTGATATTATGGTAGTTGGGCTTTAGAGTTCTAGACCAGTGTTCTCTAACAATTGTTTTTGTGGAATCTTTCCTTCAAAATGCTAGCTCAGATTCATATTCTTTAGTTTCATTGTTTCGATTTGGTATTAATTCCATTACTCCGTATAATTCTTAAAAGTATTTATTTATATCTTTTATCATAACAAACATACAAACAAAAAGATTTGTCTCAAAAGTTGCATTGTTGAAATGAACAGGCATCAAGAGAGAGTTTAGTTGTGCCAGTCAAACTCAAAAGGAAACCAACCCGCAATTCTATTTGATTTCCCTTCACACCCAAATTATTTTAACAAAGATCAAAGCAAAAGGTGGCAAAGGTAAAAACTGTTGCATTTGAAAAGCAAACTTAAACGTTTGAAGTACCCCAAATTGAAGGTAAGATGCAAATGACAAGGCTTAGGTGATTCAAACAGCGAAAGAGATAATTATCCAAATGTTTTATTGAGGAGATGAGAGGATAGTTAAACAGATTACAAGAAAGAAAAGTTAGACAGTAAAAGTTGGAGGAAGTTATTCAAAAAAGACCTGGCTTATTAAGAAATTATGGGTTACATGATTTAAAGTTGTGGCGCCCTCAAATTCGTGTGGTTCATTCATATTTTAAAAATTAAATAAATAAATAATTTCCATGCAGTTCATTCCATATAGGTGCTCTTCTTAGTCTAGGCATTTCTGTAGGGACTAGGGAGTTTTCCCCCTATGCTGCGCCTACCAACCTTTTTTATCATCTTGTATCCATATACTCTAGGCGCTATTAATTCAGGCTTCTCAGTTTCTAATTTCTAGTAGAGTGTGAGTGTCCTGTACCTATTCCTCCCTCTCCTTAGCCCTCCCTTTTCATTTATTACTATAATGACTAATGAGTGATATTGGGTAGTAGCATGACTACTGAATATTATGCTAAATTGGTTAGCTTAATTGCTTGCTTCTACTTTCCCTAAATTTTGAATTTTTTCCTTTTTGTAAATGACTTCAGCAAAAGGGGTTATTGGTGCTTTCTGAAAATACTCTCTTGACCTCTGTCCAACTAACAAGTATCTTAGGGTAATAGAGCATAGGTGTGCCAAACTTGGTATGATACAGTTCAGACTTACAGTACAAAAAAATAATTGAGTCCCACGAGATGATAAAGAGATATTGAGTTTCTGTAGAGGAATAAATGAATGCAGAAATCAGGCTAGTAGATATGCAGCACACGCAAAAAATCGTGAATAGAAAAGAAAGAATATGATTTCATAAAAGTGGCTAGAATATGCATATTGTGAAAAGGTTGGTTACCCCTGATTGATAAGTCTCATTGGGAGATAACAACATTCCCTCTTTTTATCTTCGATAAGCCAATAAACACAGGGTCAACAAGGGTTTACACTTGCATGCCGATATTGCACACCCTCCCGGACAAGCCCTCATTCTTCAACACACAATACTAACCCATGTATGTAAAAGCTGATCAGTACGAAGTATATGTTAAACAGGAAAGCTGGAAGTTTTCCTCAAATTAAGAAACAGGCTTCAAGTACTCAAAATGGAGGTTAATGTCACTTTGGATCAACTTAAATTATGAGTTATGACCTTATCATACGAGCTACGTCACATAAAAAAAAAGAAAAAAAGAGTCCAGTCTGTTCAACAATGAGAAAATACCCATGATGTGAAAGCAAGAGGTGGTTCAAGGAGACGTATGGATGTTGCTTCGATTTTCCCAACAGTGTTTCTATTTTCTCTCAAAGGCCCAGATAAAATCTCTCTGTTGCCAAGATGATTAACAAATCCCAGCACACCCCTGGTTGGGATGGGTAGGCGCCACAAAGGGCTATCTCAATGAATTCTAATTTCATTCATGGGAAGGTTTCACTCCTGAAAGAAGCATTAGCTCATATTATAAGCTTTTATGTTCTAAGTCATAACTGAATCTTCCATGAGCCCTTGTATAGCCTACCAATCTTTAAGCCCTCACTCCTTTCATATTCGTGTTACCAACTATCTTAGTATAAATTACTTTGGGGTGGGGGGGGGGNGGGTAACTAGTGTCTGCATATGCATATATATATTTGTATAAGTAACAGAACAAAAGAAAACATGAAAACAAGGAGATAAAAGGTGCAGTAAATTTTCAATTTATCCCAAAGCAATAAAGTAAAAGAAAAAAACTACTGAACACCACCTAAGAAGTAAGAAGACATAAGAGAATGTACCCAATAACAAGAGTCGTCCCTGCAGTGGCAGCACAAGCTGCAGTGCTATAACTTCCTGAACCTACAATCTTCTGAATTTCCTCTCTTTCAATTTGGTAGTTGCTTTTCATCTGCCACAAGGATATCGAATAATTCAAGCCCATTATACGGACAAGAAATGTAACATGAATAGGATATATCATACATAAAGCTCAAGTAGACGCATAAACAGGAAACCATATTTTATCCTATACTTCAGATGCCTATGGAAAAGAAGCCACGGACCACAGAAATAAACCATATCTGTGCAATCCCAACTAGCCAAAACAATCAAATTCAGCCTCATGTGACTAGCCAAAACAGGGTCTGCCTTATTAAACAAGAAATCTGGAACTAA

mRNA sequence

ATGGGAATGCCGTCTTCTCCAGAAGAACCCGTTGCACCACTAACAGTGCCTTGGGAGGAACTTGACATCGTCAACATCAGCAAGCTCATCCCTTCCTCCATGAGCAATGAACAACGGGAGATGCCTATGGAAAAGAAGCCACGGACCACAGAAATAAACCATATCTGTGCAATCCCAACTAGCCAAAACAATCAAATTCAGCCTCATGTGACTAGCCAAAACAGGGTCTGCCTTATTAAACAAGAAATCTGGAACTAA

Coding sequence (CDS)

ATGGGAATGCCGTCTTCTCCAGAAGAACCCGTTGCACCACTAACAGTGCCTTGGGAGGAACTTGACATCGTCAACATCAGCAAGCTCATCCCTTCCTCCATGAGCAATGAACAACGGGAGATGCCTATGGAAAAGAAGCCACGGACCACAGAAATAAACCATATCTGTGCAATCCCAACTAGCCAAAACAATCAAATTCAGCCTCATGTGACTAGCCAAAACAGGGTCTGCCTTATTAAACAAGAAATCTGGAACTAA

Protein sequence

MGMPSSPEEPVAPLTVPWEELDIVNISKLIPSSMSNEQREMPMEKKPRTTEINHICAIPTSQNNQIQPHVTSQNRVCLIKQEIWN
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo06170.1Spo06170.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo06170.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo06170.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo06170.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo06170.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016556 mRNA modification
biological_process GO:0043085 positive regulation of catalytic activity
biological_process GO:0000398 mRNA splicing, via spliceosome
biological_process GO:0051604 protein maturation
biological_process GO:0010207 photosystem II assembly
biological_process GO:0019760 glucosinolate metabolic process
biological_process GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process GO:0000023 maltose metabolic process
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0019252 starch biosynthetic process
biological_process GO:0006886 intracellular protein transport
biological_process GO:0006913 nucleocytoplasmic transport
biological_process GO:0007264 small GTPase mediated signal transduction
biological_process GO:0006468 protein phosphorylation
biological_process GO:0045454 cell redox homeostasis
biological_process GO:0006662 glycerol ether metabolic process
biological_process GO:0006979 response to oxidative stress
biological_process GO:0009414 response to water deprivation
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0016192 vesicle-mediated transport
biological_process GO:0006364 rRNA processing
biological_process GO:0009231 riboflavin biosynthetic process
biological_process GO:0009658 chloroplast organization
biological_process GO:0032984 protein-containing complex disassembly
biological_process GO:0006470 protein dephosphorylation
biological_process GO:0035265 organ growth
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0006457 protein folding
cellular_component GO:0009523 photosystem II
cellular_component GO:0032040 small-subunit processome
cellular_component GO:0009349 riboflavin synthase complex
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0009507 chloroplast
cellular_component GO:0005730 nucleolus
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0016020 membrane
cellular_component GO:0005622 intracellular
cellular_component GO:0009534 chloroplast thylakoid
molecular_function GO:0009055 electron transfer activity
molecular_function GO:0015035 protein disulfide oxidoreductase activity
molecular_function GO:0042393 histone binding
molecular_function GO:0005509 calcium ion binding
molecular_function GO:0004721 phosphoprotein phosphatase activity
molecular_function GO:0004672 protein kinase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0005525 GTP binding
molecular_function GO:0003924 GTPase activity
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0004746 riboflavin synthase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0046872 metal ion binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003756 protein disulfide isomerase activity
molecular_function GO:0043621 protein self-association
molecular_function GO:0005484 SNAP receptor activity
molecular_function GO:0016787 hydrolase activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo009430.80Barchart | Table
Spo116880.78Barchart | Table
Spo042000.77Barchart | Table
Spo002140.77Barchart | Table
Spo093870.76Barchart | Table
Spo216740.75Barchart | Table
Spo269750.75Barchart | Table
Spo153900.74Barchart | Table
Spo084780.74Barchart | Table
Spo190180.74Barchart | Table
Spo251960.74Barchart | Table
Spo066370.74Barchart | Table
Spo097690.74Barchart | Table
Spo053070.73Barchart | Table
Spo137830.73Barchart | Table
Spo069530.73Barchart | Table
Spo250080.73Barchart | Table
Spo256330.72Barchart | Table
Spo108350.72Barchart | Table
Spo232370.72Barchart | Table
Spo229990.72Barchart | Table
Spo229980.72Barchart | Table
Spo097980.72Barchart | Table
Spo201060.72Barchart | Table
Spo146300.72Barchart | Table
Spo139810.72Barchart | Table
Spo012520.72Barchart | Table
Spo263550.71Barchart | Table
Spo013420.71Barchart | Table
Spo084070.71Barchart | Table
Spo029180.71Barchart | Table
Spo149140.71Barchart | Table
Spo026960.71Barchart | Table
Spo154990.71Barchart | Table
Spo075480.70Barchart | Table
Spo007430.70Barchart | Table
Spo023960.70Barchart | Table
Spo094340.70Barchart | Table
Spo173370.70Barchart | Table
Spo233320.70Barchart | Table
Spo233820.70Barchart | Table
Spo242140.70Barchart | Table
Spo244300.70Barchart | Table
Spo246750.70Barchart | Table
Spo249130.70Barchart | Table
Spo253950.70Barchart | Table
Spo259850.70Barchart | Table
Spo264230.70Barchart | Table
Spo200500.69Barchart | Table
Spo002050.69Barchart | Table
Spo218330.69Barchart | Table
Spo064530.69Barchart | Table
Spo151300.69Barchart | Table
Spo266970.69Barchart | Table
Spo051250.69Barchart | Table
Spo022320.69Barchart | Table
Spo273640.69Barchart | Table
Spo175770.69Barchart | Table
Spo181040.69Barchart | Table
Spo005390.69Barchart | Table
Spo182230.69Barchart | Table
Spo186050.69Barchart | Table
Spo187780.69Barchart | Table
Spo050320.69Barchart | Table
Spo204580.68Barchart | Table
Spo041230.68Barchart | Table
Spo224510.68Barchart | Table
Spo176120.68Barchart | Table
Spo128750.68Barchart | Table
Spo221670.68Barchart | Table
Spo126820.68Barchart | Table
Spo191230.68Barchart | Table
Spo063980.68Barchart | Table
Spo002560.68Barchart | Table
Spo104910.68Barchart | Table
Spo089350.68Barchart | Table
Spo182850.68Barchart | Table
Spo194570.68Barchart | Table
Spo237120.68Barchart | Table
Spo095540.67Barchart | Table
Spo134990.67Barchart | Table
Spo135830.67Barchart | Table
Spo142320.67Barchart | Table
Spo193040.67Barchart | Table
Spo215660.67Barchart | Table
Spo220040.67Barchart | Table
Spo026480.67Barchart | Table
Spo257170.67Barchart | Table
Spo012810.67Barchart | Table
Spo255730.67Barchart | Table
Spo111960.67Barchart | Table
Spo115240.67Barchart | Table
Spo094280.67Barchart | Table
Spo122280.67Barchart | Table
Spo129450.66Barchart | Table
Spo041420.66Barchart | Table
Spo181300.66Barchart | Table
Spo029470.66Barchart | Table
Spo231540.66Barchart | Table
Spo108980.66Barchart | Table
Spo238070.66Barchart | Table
Spo163610.66Barchart | Table
Spo199380.66Barchart | Table
Spo123320.66Barchart | Table
Spo154610.66Barchart | Table
Spo243240.66Barchart | Table
Spo240160.66Barchart | Table
Spo258040.65Barchart | Table
Spo192880.65Barchart | Table
Spo259870.65Barchart | Table
Spo007610.65Barchart | Table
Spo142560.65Barchart | Table
Spo063350.65Barchart | Table
Spo044330.65Barchart | Table
Spo232490.65Barchart | Table
Spo131710.65Barchart | Table