Spo05843 (gene)

Overview
NameSpo05843
Typegene
OrganismSpinacia oleracea (Spinach)
Description(BnaA02g13350D protein) (BnaAnng14150D protein) (BnaC02g17510D protein) (BnaC06g26380D protein) (BnaC06g28890D protein)
Locationchr1 : 49690588 .. 49696306 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAAGAAATGCAATTACAACCCACAATCTATGTTACTTGGACTCGGCTACAAGTATCCGGTAAAGGTACTCGTGCAATTGGCCATCCGAGTGTAATACCAACTACGAACACGAGTATTTGAGGTCAAATGTAGAGTCGGAGTAACATAGCCCTTAATTTCAAGTTCCTAATCCATTTTCAATGATTAGCCGGATTTCAGTCTCTTAACCCAACATAAATCACTATTCTATAACATTTCGCAATCGAATAAAATTCTCACTCACATTATCTCTAATTATAAATTTAGTTGCATTCAAACTATGAAAAAAATGACGAATCATCAACCAGAAACCAAATAAGTGAAATAATCAAATAACAAATGTAACAATGAGCAACTTCTCAAAAAATTAAGCAATATGACAAATTAAATTCGATCATTGTCATCATTCACATAATCCTCGTTCTTCGAGCACAATCTAACTGCTCCAGATCACAAATTATGATCAAATTAATGCCTCGACTCTATACAAAAACACTGATTACCGACGAACAATCAATGTCCAGATAAATCTGAAGGTAACGGATAAAATTGAAGAAACTCAAACAAATTGAAGTGAAAAATTGCAACATATCAGTAATTCTGAAACAAATCTTTGAAATGAAAATATACAACCCGGCTACAGGAGTACTCACCGGTTGTCCGGCTGCCGCGGCGGCGGGATTCCGGCGGATAAAATGTGGGGATCGCGGTTTCCACTCCGATTGTCCCTTGCTAAGTGTCCAGCGGCGAAGGCAGAGAGAACTTGGAGGAGAGAGAAAGGGGCGGAAGAAGGTGGAAGATCGGACTTCAAAGGTCGAAGGTGCCAAGGCCAGGGTGGTCGCGTGAGAAAGGGGTTAGGTTTTTAGGGGGGTTTTGGGGGGGCATTGTGAGTCTGTGACAACATATTTTAGTCGTATAATGTATAATTTTAGACATCTTTAAGGATTATAGATTTATGGTGGAAAAAGAAAAAAGAAATTTCGATTAAAAAAAATAAAAAAATCTGTAATTTGGAAAATATTATCCCTAATATTTTACTCCGTAATTCTTAGCTTAACCCAAAATTCATATTTTCCCACTTTTATTAGGGATAAAATTGTAAAAGTTTGGTATCAATGACCATTTATACGTGTGTTGTCTAATCTTTTATTTTACTTGATTTTAACGCATTTTCTTTTTCTATAAAAAGCACTATGGATTTGTTACCACTTTATTATTCCTCTAGTATGGACAAAGTGTGTGGCATCCTTTACCTCTTGTGACTCTAAATTTCTCACCAAGCCCTCAAGTGTAATAAAATAGAAACCGTGATCATTTTATTGATCGGTATTTGTCGACAAATTGATGACGAGTAAGAGTAAAACTAAGTTATTAGAGCATAATTGCAAAGGTATCACTATTTTTTCACGTGCAAGTTACATAATTTCTAGTAATTTACTTGACTTTAGCACCATTTTTTCTTTCTATAATAAGCATTCTGGATTTGTTACTACTTTATTCCTCTAGGATGGTATGTGAGAACCCCTTGTCTTTCGTGACTTTAAAATTCTCACTAAGGGTAATAGACTAGAAATTTGTTGATAAACCGATAACGAGTAAGAATAAAACTAAGTTATTTAAAGTTAATGTTATTCTAATTTGTTTTATATAAAAGTAAACTGTAATGTATTAAGAAAATGGTTTTGTATAAGAATTAGCATGTTTGAGAAAATTCAACTCTGGTTCAACCATCTAAGAATCTAAGATCTATAAGTAACTTAACATGAACAATATATTTCAAGCCCAATAACTATACTATAAGCCAATCTCAAAACAATATAGCATGTAGAGTTTGTAGCACGTTGACCATCATTTGATCTTTGTGACACGACACTAGAGTCAAGACATATTAAATTACAGTTTTATTTTAGACTGTTTGAAATATTACTATGTCTCTGCTAAATATTTATAAATATACTAATTTGAGATTTTTGATGTTTCAAAACCTATGTTTTTATCATTTTTTATTTTTATTAATATTCGATATATCAGAAGATCACACTTATTAGACGGTCCGATAGGAGAAATTGTGCAAAGAAAAATAATGAACAAAAAGGCCAGGCGTATGGGCTTTTGAAGGGGAAAGCCCTTAAAACATAAATCCGAATAATATACGGACCTCTCTAGTTTGTACCATTCCAAAATCGGTCTCCAATCGATCTCAATTCATCTTCTCCAAATTATCTGAAGAGAGAAAAAGAAGAAAGAGAAAAATGGTGAAAATGGGAACATTCTTCGGGATGTCATTGGGTGCATTCGTTTTCTGGCAATCTATGGACAAAGTTCACGTTTGGATCGCGCTTCACCAAGATGAAAAGGTCCCCCTTTTTCTTACACTCTTTTTCTGCTTCCGAAATTTTGATCTTTTGAAACCCTAATTTCTTAATTAGTGCTATTTATCAGCTTAATTTCGTTTGTCCAACTTCAATTTTCTTTGAATTAAGTTATCTCTATGAAAATCGGGAATTTTAATTTATTTGTAGGCTTGTAGCTGGTGGTTTAGCTGGAAATGTGGTAGGAAATCCGTTGATGTAGGGGGAAAAGACAGAAATTTTTTCTGGGGAAACAAATTAGAATCCCATTGTGGTTTAGGAATTGTTAATTTTTTGGGAAGATCATGTTGGTGGTTTAAAATTTAGGAATTAAGAATTGAACCAGATTAATAATATTTGTTCATTCTACCAGAGATCGATCAGTTTGATTATATTTTTTTTAATAGTTAAACTAAGAATTGGGTCCTCTGTTTGTGTGTTACTACCTTCATCTGGGTTTAGTTGCAATGACAGTGGTTTAGAATGCACAATCAATGCGACTATTAATCCCGGAATTCTCAACTTCGTAATGTTTGTCTCAAGATCAACATCATTTTACCCCATTTTGGTTAGGGGCATGTTTGGAGTATCTTCGCCACAGGGCCATACAATCGGTTGTATATGGGAAATTGCCACATATTTGGTGTTAAATTAGGGTCTTTTCCTCGTGAAATTTGTATAAAAGATGAACTTAGATGTTGTGTTCTTATATTTTAGCTCTGTTTTGGGTGAGGATTCATTTCAAGCATTGAAAAGATGGATATATTGCTGGGATAATTGAAACTGGACCTCCTTCCCCTCTCTCCCCCAAATAAAAAGATAGAAATGTTGCTTGGAGAACTGCCTAAGATATTGGAGAATGATTTATTCGGGTTGGGAGTTTAGGAAGTTTAGTATAGATTCTTTATTTATTATGTTGTAGCATTTCGGTTCTCTTTCCGCTTTCTCTTGGCATTTCAGTTGCCAACTTCACTTTATGATGTTGGTTTACTCCAGTTAAATTCTGGAGCAGACTTTATTGTCTACTGTCTAGTACCCTGGCCTGTTTTCATAATGTTTCATCTTGTGAGAAGTTATTCGTTTGATATGTTGCTTGAGAGTTGAGACTTAAAAGTTGGGTTGTATGTGTTTCTTGTAAGCTCTAGGTTCATTGATATATATGATCCAGAATCTTCTGATTACAGGCATTTTCTGAAGTTTCCTGCTTCTGTTGTGTTGCAGATTTTACTTTATTACCTAACTCATCATAAGTGGGTTTTTTCTCTTGTATATTTAATATCTTTATTAGCTCCCTTGATTAGCTTGAATGATAAAATCAAACTTAAAATGTATGAGCATGTAACTTTGGAGCTAAAGGTGAACCTTGATGAGAGCAACAAAGCCTGATTTGGGAAAGAATTTAGGAGAAAAAAAAAATCATTTTTAGTTTTTTACATGTGTGATCGAAAAAGAAAAGGTTGGATGGATGGAAGGTTTTGTACTGAGAGAGAGGAGTATAAAAAAAATGCCTTACAACCACCCTGTTGCCCATTCTGTCCAATAAAAAGTTCTATTAGCGCTTGCAAGAAGTCAATTTTTCTGTCAATTATATCTGAACCAAGCATGCTGGAATGGTTGGGATTACTCTTTTATGTAAAATAACAAGACTACAAGAGTGTGTTCCGTTTCTCTTTCTGCTTTCTCTGTTCGTTTCATTCACCAATTCACTTTATGATGTTGATGGGATTACTCTAGTGAGAAGTAGACTGTATCCTGGCTTTTTTCAAAATGTCTCATTTGTGAAATATTGCTTGGGACTTAAAAGTTGGCTTCTGTGTGTTTCGTGTAAATTCTGGATTGATTAGCTGGTGATCCATTCAGTTTAATGTTGATCACATATGATTGTGTTTATGTTTTTCCTGCTTCGCTTGTGGTAGATTTACATCTTGATTAGCTTAACTTTTGTAAATGGGGATTCTCTCATGTATATGTATTATGTAATTGGTATTGAATCCCTTGGTTGGCTTGAATGATAGTAGTAAGAACCTATGTTACTTCGACCCGTCGGTTGACAGAGGGTGTCAGATCCTCCGATCCTTCGACACGACATGACACCCCCAAATATATCGTGGCCTTATATGAAGCTTATTACATCCCGAGTGCCGGAGGAGGATCCTCCAATCCCTTATCGTACACGACACCCAAATAAGAGTCCGAGCAACATAGGTAACAACTAATTTTGAATGCACGGTCATTTAACTTTGGAGCTGAAGGTAAACCTTTTGATGCGAGTAGTTAACTCGCATAGCTTATAAGGATCCAAGTTTTGCTTAAGTTTGGATGGAGTTATTTGGAGAAGAATGTGGGAGAAAAAAATATGATTTCTTACATTTGAATAATCGAATAAGACAAAGTTTGGGTAGGTGAAAGGTTTTGTACTTCATTACCTCCTGCAATAGACTGAAATAGAGAATCTACCCTCTTGTTGATGGTTGTCTAAAAACGTCTTCAACCTAGCGTTGATTGTCTGATCATACGTCAATGACATTTCTCAAAAAGACCCCTTTAAATACATGGAAACTCACTCTTTTCCTCCCCTCGCCTTTCTGTAGCAGTGGATTCTTCCTTTTATCCGGACTGACTCTAATCGTGATTTTGACTCTATTATTCTATCTTCCTCTGTCGCAATAGAATGGAGGTGACATGTTTTACCCTCCACAAATGCACCAAATAAAGTGTAAAAGTTCTAATAAGCACTTCACTAGAGGTCAATTTTTGATAGAGAGATTTTGGTTGATGTATTGAGCTTGTTGTATGTTAAATTAAGAAAGCTTGTGGTTTGTTTTTGCAGAAAGAACGAGAGGAGAGGGAAATGGAGGTCAGGAGAGTGAGAGAAGAGCTCATGCAACAAGCACAACAAAGGGATTCTGTTGCATAATTTTGTGTTATAGTAGCTTTACATGGAGCTTTCTATATTTTGCTGTTATCCTTTTGGGTGTTATTTTTGTTCTGACTTTTGATTAACTTCTCATAAATAGCCATCTATTGAATCGATGGAAGGTTTCTTGTTGTGAAGAATGTACTGTCTTGAGCTTATAAGACGCTCAATGTAGCATGTACTCGACTATTGATTTATGGAATATTGGCAAAGTTTCAGATTCACTCCTTTTGTCTCGAATATCTTGGTTTGTTAATTTTATCGCCTTATATGAAGGTAGAAAACACCGAAGATAGGTTTGTGATGACCTGTTTGTTTTTCATCATTATCCGAATTTCTCAGCTCTGTAATTACATGTTAACTGAGACTCATGATGTTAAGGTCATTTTATTCTTAATGGTACTCCCTCTGTCCCTAATTGTTTGCCCC

mRNA sequence

ATGAAAAGAAATGCAATTACAACCCACAATCTATGTTACTTGGACTCGGCTACAAGTATCCGGAGTACTCACCGGTTGTCCGGCTGCCGCGGCGGCGGGATTCCGGCGGATAAAATGTGGGGATCGCGGTTTCCACTCCGATTGTCCCTTGCTAAGTGTCCAGCGGCGAAGGCAGAGAGAACTTGGAGGAGAGAGAAAGGGGCGGAAGAAGGTGGAAGATCGGACTTCAAAGGTCGAAGGTGCCAAGGCCAGGGTGGTCGCGTGAGAAAGGGGTTAGTTTGTACCATTCCAAAATCGGTCTCCAATCGATCTCAATTCATCTTCTCCAAATTATCTGAAGAGAGAAAAAGAAGAAAGAGAAAAATGGTGAAAATGGGAACATTCTTCGGGATGTCATTGGGTGCATTCGTTTTCTGGCAATCTATGGACAAAGTTCACGTTTGGATCGCGCTTCACCAAGATGAAAAGAATGGAGGTGACATGTTTTACCCTCCACAAATGCACCAAATAAAGTGTAAAAGTTCTAATAAGCACTTCACTAGAGAAAGAACGAGAGGAGAGGGAAATGGAGGTCAGGAGAGTGAGAGAAGAGCTCATGCAACAAGCACAACAAAGGGATTCTGTTGCATAATTTTGTGTTATAGTAGCTTTACATGGAGCTTTCTATATTTTGCTGTTATCCTTTTGGGTGTTATTTTTGTTCTGACTTTTGATTAACTTCTCATAAATAGCCATCTATTGAATCGATGGAAGGTTTCTTGTTGTGAAGAATGTACTGTCTTGAGCTTATAAGACGCTCAATGTAGCATGTACTCGACTATTGATTTATGGAATATTGGCAAAGTTTCAGATTCACTCCTTTTGTCTCGAATATCTTGGTTTGTTAATTTTATCGCCTTATATGAAGGTAGAAAACACCGAAGATAGGTTTGTGATGACCTGTTTGTTTTTCATCATTATCCGAATTTCTCAGCTCTGTAATTACATGTTAACTGAGACTCATGATGTTAAGGTCATTTTATTCTTAATGGTACTCCCTCTGTCCCTAATTGTTTGCCCC

Coding sequence (CDS)

ATGAAAAGAAATGCAATTACAACCCACAATCTATGTTACTTGGACTCGGCTACAAGTATCCGGAGTACTCACCGGTTGTCCGGCTGCCGCGGCGGCGGGATTCCGGCGGATAAAATGTGGGGATCGCGGTTTCCACTCCGATTGTCCCTTGCTAAGTGTCCAGCGGCGAAGGCAGAGAGAACTTGGAGGAGAGAGAAAGGGGCGGAAGAAGGTGGAAGATCGGACTTCAAAGGTCGAAGGTGCCAAGGCCAGGGTGGTCGCGTGAGAAAGGGGTTAGTTTGTACCATTCCAAAATCGGTCTCCAATCGATCTCAATTCATCTTCTCCAAATTATCTGAAGAGAGAAAAAGAAGAAAGAGAAAAATGGTGAAAATGGGAACATTCTTCGGGATGTCATTGGGTGCATTCGTTTTCTGGCAATCTATGGACAAAGTTCACGTTTGGATCGCGCTTCACCAAGATGAAAAGAATGGAGGTGACATGTTTTACCCTCCACAAATGCACCAAATAAAGTGTAAAAGTTCTAATAAGCACTTCACTAGAGAAAGAACGAGAGGAGAGGGAAATGGAGGTCAGGAGAGTGAGAGAAGAGCTCATGCAACAAGCACAACAAAGGGATTCTGTTGCATAATTTTGTGTTATAGTAGCTTTACATGGAGCTTTCTATATTTTGCTGTTATCCTTTTGGGTGTTATTTTTGTTCTGACTTTTGATTAA

Protein sequence

MKRNAITTHNLCYLDSATSIRSTHRLSGCRGGGIPADKMWGSRFPLRLSLAKCPAAKAERTWRREKGAEEGGRSDFKGRRCQGQGGRVRKGLVCTIPKSVSNRSQFIFSKLSEERKRRKRKMVKMGTFFGMSLGAFVFWQSMDKVHVWIALHQDEKNGGDMFYPPQMHQIKCKSSNKHFTRERTRGEGNGGQESERRAHATSTTKGFCCIILCYSSFTWSFLYFAVILLGVIFVLTFD
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo05843.1Spo05843.1mRNA


Homology
[Close]
BLAST of Spo05843.1 vs. NCBI nr
Match: gi|902212625|gb|KNA17044.1| (hypothetical protein SOVF_083730 [Spinacia oleracea])

HSP 1 Score: 78.6 bits (192), Expect = 1.700e-11
Identity = 35/35 (100.00%), Postives = 35/35 (100.00%), Query Frame = 1 

		  

Query: 122 MVKMGTFFGMSLGAFVFWQSMDKVHVWIALHQDEK 157
           MVKMGTFFGMSLGAFVFWQSMDKVHVWIALHQDEK
Sbjct: 1   MVKMGTFFGMSLGAFVFWQSMDKVHVWIALHQDEK 35
[Close]
BLAST of Spo05843.1 vs. NCBI nr
Match: gi|870855902|gb|KMT07605.1| (hypothetical protein BVRB_6g147340 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 77.0 bits (188), Expect = 4.900e-11
Identity = 34/35 (97.14%), Postives = 35/35 (100.00%), Query Frame = 1 

		  

Query: 122 MVKMGTFFGMSLGAFVFWQSMDKVHVWIALHQDEK 157
           MVK+GTFFGMSLGAFVFWQSMDKVHVWIALHQDEK
Sbjct: 1   MVKVGTFFGMSLGAFVFWQSMDKVHVWIALHQDEK 35
[Close]
BLAST of Spo05843.1 vs. NCBI nr
Match: gi|976900773|gb|KVH88939.1| (hypothetical protein Ccrd_024686 [Cynara cardunculus var. scolymus])

HSP 1 Score: 73.6 bits (179), Expect = 5.400e-10
Identity = 33/35 (94.29%), Postives = 33/35 (94.29%), Query Frame = 1 

		  

Query: 122 MVKMGTFFGMSLGAFVFWQSMDKVHVWIALHQDEK 157
           MV M TFFGMSLGAFVFWQSMDKVHVWIALHQDEK
Sbjct: 1   MVNMTTFFGMSLGAFVFWQSMDKVHVWIALHQDEK 35
[Close]
BLAST of Spo05843.1 vs. NCBI nr
Match: gi|976911094|gb|KVH97753.1| (hypothetical protein Ccrd_000112 [Cynara cardunculus var. scolymus])

HSP 1 Score: 73.6 bits (179), Expect = 5.400e-10
Identity = 33/35 (94.29%), Postives = 33/35 (94.29%), Query Frame = 1 

		  

Query: 122 MVKMGTFFGMSLGAFVFWQSMDKVHVWIALHQDEK 157
           MV M TFFGMSLGAFVFWQSMDKVHVWIALHQDEK
Sbjct: 1   MVNMTTFFGMSLGAFVFWQSMDKVHVWIALHQDEK 35
[Close]
BLAST of Spo05843.1 vs. NCBI nr
Match: gi|944243922|gb|KQL08230.1| (hypothetical protein SETIT_004287mg, partial [Setaria italica])

HSP 1 Score: 73.2 bits (178), Expect = 7.000e-10
Identity = 30/43 (69.77%), Postives = 38/43 (88.37%), Query Frame = 1 

		  

Query: 114 ERKRRKRKMVKMGTFFGMSLGAFVFWQSMDKVHVWIALHQDEK 157
           ER  +++KMV++ TFF M+ GAF+FWQSMD+VHVWIALHQDEK
Sbjct: 22  ERSEKRKKMVRVATFFAMTFGAFLFWQSMDRVHVWIALHQDEK 64
[Close]
BLAST of Spo05843.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RDH7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_083730 PE=4 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 1.200e-11
Identity = 35/35 (100.00%), Postives = 35/35 (100.00%), Query Frame = 1 

		  

Query: 122 MVKMGTFFGMSLGAFVFWQSMDKVHVWIALHQDEK 157
           MVKMGTFFGMSLGAFVFWQSMDKVHVWIALHQDEK
Sbjct: 1   MVKMGTFFGMSLGAFVFWQSMDKVHVWIALHQDEK 35
[Close]
BLAST of Spo05843.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C1G2_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g147340 PE=4 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 3.400e-11
Identity = 34/35 (97.14%), Postives = 35/35 (100.00%), Query Frame = 1 

		  

Query: 122 MVKMGTFFGMSLGAFVFWQSMDKVHVWIALHQDEK 157
           MVK+GTFFGMSLGAFVFWQSMDKVHVWIALHQDEK
Sbjct: 1   MVKVGTFFGMSLGAFVFWQSMDKVHVWIALHQDEK 35
[Close]
BLAST of Spo05843.1 vs. UniProtKB/TrEMBL
Match: A0A103XDX9_CYNCS (Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_024686 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 3.800e-10
Identity = 33/35 (94.29%), Postives = 33/35 (94.29%), Query Frame = 1 

		  

Query: 122 MVKMGTFFGMSLGAFVFWQSMDKVHVWIALHQDEK 157
           MV M TFFGMSLGAFVFWQSMDKVHVWIALHQDEK
Sbjct: 1   MVNMTTFFGMSLGAFVFWQSMDKVHVWIALHQDEK 35
[Close]
BLAST of Spo05843.1 vs. UniProtKB/TrEMBL
Match: A0A103XVQ5_CYNCS (Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_000112 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 3.800e-10
Identity = 33/35 (94.29%), Postives = 33/35 (94.29%), Query Frame = 1 

		  

Query: 122 MVKMGTFFGMSLGAFVFWQSMDKVHVWIALHQDEK 157
           MV M TFFGMSLGAFVFWQSMDKVHVWIALHQDEK
Sbjct: 1   MVNMTTFFGMSLGAFVFWQSMDKVHVWIALHQDEK 35
[Close]
BLAST of Spo05843.1 vs. UniProtKB/TrEMBL
Match: K3XQV0_SETIT (Uncharacterized protein OS=Setaria italica GN=SETIT_004287mg PE=4 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 4.900e-10
Identity = 30/43 (69.77%), Postives = 38/43 (88.37%), Query Frame = 1 

		  

Query: 114 ERKRRKRKMVKMGTFFGMSLGAFVFWQSMDKVHVWIALHQDEK 157
           ER  +++KMV++ TFF M+ GAF+FWQSMD+VHVWIALHQDEK
Sbjct: 22  ERSEKRKKMVRVATFFAMTFGAFLFWQSMDRVHVWIALHQDEK 64
[Close]
BLAST of Spo05843.1 vs. TAIR (Arabidopsis)
Match: AT1G67785.1 (unknown protein)

HSP 1 Score: 67.0 bits (162), Expect = 1.800e-11
Identity = 29/35 (82.86%), Postives = 32/35 (91.43%), Query Frame = 1 

		  

Query: 122 MVKMGTFFGMSLGAFVFWQSMDKVHVWIALHQDEK 157
           MVK+ T+FGM+L AF FWQSMDKVHVWIALHQDEK
Sbjct: 1   MVKVLTYFGMTLAAFAFWQSMDKVHVWIALHQDEK 35
The following BLAST results are available for this feature:
BLAST of Spo05843.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902212625|gb|KNA17044.1|1.7e-11100.hypothetical protein SOVF_0837... [more]
gi|870855902|gb|KMT07605.1|4.9e-1197.1hypothetical protein BVRB_6g14... [more]
gi|976900773|gb|KVH88939.1|5.4e-1094.2hypothetical protein Ccrd_0246... [more]
gi|976911094|gb|KVH97753.1|5.4e-1094.2hypothetical protein Ccrd_0001... [more]
gi|944243922|gb|KQL08230.1|7.0e-1069.7hypothetical protein SETIT_004... [more]
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BLAST of Spo05843.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RDH7_SPIOL1.2e-11100.Uncharacterized protein OS=Spi... [more]
A0A0J8C1G2_BETVU3.4e-1197.1Uncharacterized protein OS=Bet... [more]
A0A103XDX9_CYNCS3.8e-1094.2Uncharacterized protein OS=Cyn... [more]
A0A103XVQ5_CYNCS3.8e-1094.2Uncharacterized protein OS=Cyn... [more]
K3XQV0_SETIT4.9e-1069.7Uncharacterized protein OS=Set... [more]
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BLAST of Spo05843.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo05843.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1
Match NameE-valueIdentityDescription
AT1G67785.11.8e-1182.8unknown protein[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR37711FAMILY NOT NAMEDcoord: 123..156
score: 6.9
NoneNo IPR availablePANTHERPTHR37711:SF1SUBFAMILY NOT NAMEDcoord: 123..156
score: 6.9

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
biological_process GO:0055085 transmembrane transport
biological_process GO:1902600 proton transmembrane transport
biological_process GO:0042545 cell wall modification
biological_process GO:0009664 plant-type cell wall organization
biological_process GO:0010158 abaxial cell fate specification
biological_process GO:0001510 RNA methylation
biological_process GO:0016049 cell growth
biological_process GO:0010051 xylem and phloem pattern formation
biological_process GO:0000902 cell morphogenesis
biological_process GO:0007030 Golgi organization
biological_process GO:0090503 RNA phosphodiester bond hydrolysis, exonucleolytic
biological_process GO:0007033 vacuole organization
biological_process GO:0010228 vegetative to reproductive phase transition of meristem
biological_process GO:0008152 metabolic process
biological_process GO:0019344 cysteine biosynthetic process
biological_process GO:0015991 ATP hydrolysis coupled proton transport
biological_process GO:0009616 virus induced gene silencing
biological_process GO:0006886 intracellular protein transport
biological_process GO:0009855 determination of bilateral symmetry
biological_process GO:0030244 cellulose biosynthetic process
biological_process GO:0009850 auxin metabolic process
biological_process GO:0009734 auxin-activated signaling pathway
biological_process GO:0048439 flower morphogenesis
biological_process GO:0048193 Golgi vesicle transport
biological_process GO:0048519 negative regulation of biological process
biological_process GO:0048438 floral whorl development
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0046686 response to cadmium ion
biological_process GO:0007264 small GTPase mediated signal transduction
biological_process GO:0010050 vegetative phase change
biological_process GO:0009887 animal organ morphogenesis
biological_process GO:0010582 floral meristem determinacy
cellular_component GO:0005737 cytoplasm
cellular_component GO:0033179 proton-transporting V-type ATPase, V0 domain
cellular_component GO:0022627 cytosolic small ribosomal subunit
cellular_component GO:0009506 plasmodesma
cellular_component GO:0005795 Golgi stack
cellular_component GO:0005618 cell wall
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005634 nucleus
cellular_component GO:0016471 vacuolar proton-transporting V-type ATPase complex
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0015078 proton transmembrane transporter activity
molecular_function GO:0005515 protein binding
molecular_function GO:0016740 transferase activity
molecular_function GO:0003723 RNA binding
molecular_function GO:0004535 poly(A)-specific ribonuclease activity
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0046872 metal ion binding
molecular_function GO:0005525 GTP binding
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:0003677 DNA binding
molecular_function GO:0042626 ATPase activity, coupled to transmembrane movement of substances
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo229550.73Barchart | Table
Spo220520.73Barchart | Table
Spo089970.72Barchart | Table
Spo225830.71Barchart | Table
Spo028900.70Barchart | Table
Spo185780.70Barchart | Table
Spo052350.70Barchart | Table
Spo123760.70Barchart | Table
Spo269860.69Barchart | Table
Spo109400.69Barchart | Table
Spo145370.69Barchart | Table
Spo081970.69Barchart | Table
Spo158730.69Barchart | Table
Spo149800.68Barchart | Table
Spo146670.68Barchart | Table
Spo186940.68Barchart | Table
Spo012610.68Barchart | Table
Spo076190.68Barchart | Table
Spo024800.68Barchart | Table
Spo095590.68Barchart | Table
Spo093870.67Barchart | Table
Spo057280.67Barchart | Table
Spo072450.67Barchart | Table
Spo073900.67Barchart | Table
Spo093810.67Barchart | Table
Spo126590.67Barchart | Table
Spo134900.67Barchart | Table
Spo228110.67Barchart | Table
Spo235180.67Barchart | Table
Spo245900.67Barchart | Table
Spo256590.67Barchart | Table
Spo140840.66Barchart | Table
Spo042540.66Barchart | Table
Spo252300.66Barchart | Table
Spo020850.66Barchart | Table
Spo014480.66Barchart | Table
Spo237120.66Barchart | Table
Spo132810.66Barchart | Table
Spo134410.66Barchart | Table
Spo266400.66Barchart | Table
Spo149420.66Barchart | Table
Spo076090.66Barchart | Table
Spo056570.66Barchart | Table
Spo096740.65Barchart | Table
Spo026960.65Barchart | Table
Spo007480.65Barchart | Table
Spo086030.65Barchart | Table
Spo166410.65Barchart | Table
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Spo132090.65Barchart | Table