Spo05833 (gene) | SpinachBase

Overview


Name	Spo05833
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Ribosomal protein S21 family protein
Location	chr1 : 49892305 .. 49895638 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGAGTCAGTTTTGACAAGTACGTTTCCCACGTATAATTAGGCTAATGGGTTTGGGCCCGATTTGGATTTTACCCATTTAGCCATTTCCCGTCGCTCAACCCATTTATGTTTTTAACGCCACTCTTTCACATCACCGTCACCGGCGACGAATAGTCGAAAACCCCAAAGCAAAACCCCCCCGCAACCCCAGAAAATGAACTCAGCGGCGAGTCACCTAGCGAGTCTGCTGAAGCGTCCGAGTTCAACCTTGAACTCAGTGAGCTCATCTCTCCAACAGTGGCGGGGGATCAGAGTTAGGGTAAAGAACGGGAACCTGGAGCAAGCGCTGTCATTCATGCAGAGAAAGATGACGTCAAGTGGGATCGAACGGATGATAAAAAGAGAAGAAACTCATCACATCAAGAATTCCGAGAAGCGCGTATTAGCACGCAAAGCTCTCCACCGTCGCCTCCAGTCCCAGGACCTTGGTCGCAAGCTCAAATCCATCCTCATCAAGAAAGTCAGGTCCGTATTTTTTTTTGTAGTTTTTGTGATTCATTTGTTGAATTAATGTGATTGTGTTGTTGGAATGTTGTTTTTTTGGTGGCTAAAGAGCCGCAAAAGCAAATTGGTGTAGACGGAATTCGATCCCCGGTCTCAAAAATGTTGTGGGGAGATGTTGTAGGTTGAGTTTTAGTTTGTCACTGTATGATTTTGGGCGAGTTTTAAAATTTCAGTTTGAGTTATCTGTGATTGTTTAGGAAGTTGATGCATTTGTTTTTTAAAGGAATTGTGCTATTTGGGAGAATGGCAGGGCTAATTGCTAGCAAAGTTTATGCTTTTTGAAAGGAATTGTGCTATCTGGGAGAATGGCAGGACTAATTGCTAGCAAAGTTTATGCTTCTAGGTTGTTAGAGATATCTTGTTAATAGGGAATTGTATAGTTGATTGATAAATGTATTTGTGCTTGAATTATATGTTGTAAGGTTAGAGAACTCGAGCGAATTGATGGTCTGATTTTTATAGTTGATTGGATAAGTAGATTTGTGCTTGAAGTATATGTTGTAAGGTTAGAGAACTCGAGCGAATTGGTGGTCTGATTTTCTTCTTGGGCAAGGGAGGAAATCATTGAGGGGTATGTTTGATAAGAATTCAGATCAAAGTGGTGCAACTCGTGCAAGGGTATTGTATCATTTTGTTTGTTGTTGTCGAAGGAGGTCCTTGATGAGCATTCTAGTACTTCGTATTTGTTATCTATTTAATATCCAATGGCCTACAATAGGATTATCAAGTGTCAATAAGTGTGTCGATTTGCTTGTTTATGTATCAGCATACTCTGCCTCTTTCTATCTATCTTCGGTGGAAGATATGTTGGCATTCTCACTCAAGGATTTGGAATTGGGGAACTTGTTGTGGTTATTCTACCTCTTGTTGTTATGGCATTATCGTACGCGTGCTTGAAAGCCTGTTTGAAGATTAACTGTTAAGTAAACAATTGAGGACCCATTTCTAGATATATGGGTTGTTGTCAAGGCTATTAGTGTGAGAAGAAAAGAATATATCCTATATTACTTTACTTCACTCTTCATTTTGTGTTCTATACCCGTGTCAGAGATTTGACACTCCGATAAGGGTATGGATTTCTTATCCTACACTTCCATGCTCACTCAAAAACTTCAATTACCACTGTAGAAGAAAATGGGAAAATAGAAGGAATAAGAAGACGAATATGTATGATATGTGTTCACAAATGGGCTTTAGATAACAAGATAAGTACTTTAACAGGAATTGGCAATCAAATTAGCCTAAAACGTGTGTATATGCATTTGTATGTTAGAGGCTTAGAGCTCATGCAAAGAGTCTTCTATAAACAGAAATGTGTTCCGTTTGTGCTGTGTCCCTGCACCCATGTCCAACTTTAGGAGTGTCCCCGTTTCTGAAATTTTCAGCCTTAACGTGTCACATACATGGATACGTACCCGCACCCGACATTTATTCCCATGATGAAGCAATATAGAATATAGTTGCAGTCTAAAAAGCAGTTTCTGATCTCATAAGTCACTCCTTTTTCTTATTTAGCTGATAGCATATTTGTAGTGTTGGTAATTACTAATTCAAAATTGTATATATAGCTATTTTATCCCCCTCCTCCTCTAAGAAGTGCTGCTGGTATAAGCTTATAGTCACATTTAGAGGAATGCTAGTTTTCTCTACAGTTCTCGACATTATTTGCAACAGTGCAAGCTCTGTATGGTACAGTGTTTTCTGGGAAATGCTGTTGCTACCTAATGACAAATCAATACTGATTTCTCTCCGAAAGCTAGTAATCAGCTTCGCCAGGAATCGTTTCTGAAAATTCCATGTTAGATTAACTTGCATCATGAGGTGTGAAATAGCTCGATATTGTTTTTAGTGAAGCGTCATTGTGCTCTGTTGAAGTGTTGAGTGTTCTTTAGCATCAGATTTTCTGAATGTAGGGCTTGACCGGTTGATATATGGAAGCAAAATGTGGCTTACGCCTTACACTAGTCACAATTAATCTTGCTGAGGTGGGGTTATACTTAAATCTGTGTAATGGCTAGAGATTAGTGAAGCTGTTATCATTTGTTGAAATTTTATGTGAACTGGTGAGTACAGTAGGGCATTGTAAGCTCTAGATGTCAAGGGATCTTGATCACAATCAACCATACATACATTAAGATCTAGCTTTAGGGCTGGGGTGATTTTGAACTTAGAAGTGTTTTCAAAGTGTACAAGGTGTATCCGTGCGTATCATGAATATGAACAAGATAACTTTTCCTGCTTGATTTAACAGTGATAGATAAATAAAAATTGTTTATTAATAGTTTTTTGCTGGAATCTTTTGCAGGGGTCTATGAGGGTGTTCTGGAGGGAGATACTGGCAACTACACTCAGGTTTTGTACGTTGCTGTTGGGTTTCAACCTCGTGTAATTGAATTTCTTCGATCACCAAACGAGTTATATGAATGTTGCAGGTTCTTGCAAGTTGTCAAACTAATTGCAGTCCTTGTAGATCACCAATTATTTTTAATAGACTTTCATAGTTCATTTGCTCATATTTCTTTTCTTTTACAAATCTTTTCGTCGTTGTTGATCATACGATTATTCAAATGCTCTCATGTATTATGTAACAAATAAAAGTTGGAGGTAATAAGTTTCTCACTTCTCGGTGTCTATGGCTTACTGGAGCACGAGTGTGATGAACTTGTACTTCAAGTGAATGAAGATCAAAATTTTGTTGAATATATTTCTCTCTTAGTTGAGGCCTGTGAGTTGTTGCTTGCAGTCCATAAGCCTCACGACCACGGGCTCAAGCCGCTCAACTCATAACACG

mRNA sequence

CGAGTCAGTTTTGACAAGTACGTTTCCCACGTATAATTAGGCTAATGGGTTTGGGCCCGATTTGGATTTTACCCATTTAGCCATTTCCCGTCGCTCAACCCATTTATGTTTTTAACGCCACTCTTTCACATCACCGTCACCGGCGACGAATAGTCGAAAACCCCAAAGCAAAACCCCCCCGCAACCCCAGAAAATGAACTCAGCGGCGAGTCACCTAGCGAGTCTGCTGAAGCGTCCGAGTTCAACCTTGAACTCAGTGAGCTCATCTCTCCAACAGTGGCGGGGGATCAGAGTTAGGGTAAAGAACGGGAACCTGGAGCAAGCGCTGTCATTCATGCAGAGAAAGATGACGTCAAGTGGGATCGAACGGATGATAAAAAGAGAAGAAACTCATCACATCAAGAATTCCGAGAAGCGCGTATTAGCACGCAAAGCTCTCCACCGTCGCCTCCAGTCCCAGGACCTTGGTCGCAAGCTCAAATCCATCCTCATCAAGAAAGTCAGGGGTCTATGAGGGTGTTCTGGAGGGAGATACTGGCAACTACACTCAGGTTTTGTACGTTGCTGTTGGGTTTCAACCTCGTGTAATTGAATTTCTTCGATCACCAAACGAGTTATATGAATGTTGCAGGTTCTTGCAAGTTGTCAAACTAATTGCAGTCCTTGTAGATCACCAATTATTTTTAATAGACTTTCATAGTTCATTTGCTCATATTTCTTTTCTTTTACAAATCTTTTCGTCGTTGTTGATCATACGATTATTCAAATGCTCTCATGTATTATGTAACAAATAAAAGTTGGAGGTAATAAGTTTCTCACTTCTCGGTGTCTATGGCTTACTGGAGCACGAGTGTGATGAACTTGTACTTCAAGTGAATGAAGATCAAAATTTTGTTGAATATATTTCTCTCTTAGTTGAGGCCTGTGAGTTGTTGCTTGCAGTCCATAAGCCTCACGACCACGGGCTCAAGCCGCTCAACTCATAACACG

Coding sequence (CDS)

ATGAACTCAGCGGCGAGTCACCTAGCGAGTCTGCTGAAGCGTCCGAGTTCAACCTTGAACTCAGTGAGCTCATCTCTCCAACAGTGGCGGGGGATCAGAGTTAGGGTAAAGAACGGGAACCTGGAGCAAGCGCTGTCATTCATGCAGAGAAAGATGACGTCAAGTGGGATCGAACGGATGATAAAAAGAGAAGAAACTCATCACATCAAGAATTCCGAGAAGCGCGTATTAGCACGCAAAGCTCTCCACCGTCGCCTCCAGTCCCAGGACCTTGGTCGCAAGCTCAAATCCATCCTCATCAAGAAAGTCAGGGGTCTATGA

Protein sequence

MNSAASHLASLLKRPSSTLNSVSSSLQQWRGIRVRVKNGNLEQALSFMQRKMTSSGIERMIKREETHHIKNSEKRVLARKALHRRLQSQDLGRKLKSILIKKVRGL

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo05833.1	Spo05833.1	mRNA

Homology

[Close]

BLAST of Spo05833.1 vs. NCBI nr
Match: gi|902239764|gb|KNA25706.1| (hypothetical protein SOVF_003270 [Spinacia oleracea])

HSP 1 Score: 193.7 bits (491), Expect = 1.600e-46
Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 1


		  
Query: 1   MNSAASHLASLLKRPSSTLNSVSSSLQQWRGIRVRVKNGNLEQALSFMQRKMTSSGIERM 60
           MNSAASHLASLLKRPSSTLNSVSSSLQQWRGIRVRVKNGNLEQALSFMQRKMTSSGIERM
Sbjct: 1   MNSAASHLASLLKRPSSTLNSVSSSLQQWRGIRVRVKNGNLEQALSFMQRKMTSSGIERM 60

Query: 61  IKREETHHIKNSEKRVLARKALHRRLQSQDLGRKLKSILIKKVRGL 107
           IKREETHHIKNSEKRVLARKALHRRLQSQDLGRKLKSILIKKVRGL
Sbjct: 61  IKREETHHIKNSEKRVLARKALHRRLQSQDLGRKLKSILIKKVRGL 106

[Close]

BLAST of Spo05833.1 vs. NCBI nr
Match: gi|731336154|ref|XP_010679103.1| (PREDICTED: uncharacterized protein LOC104894543 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 171.4 bits (433), Expect = 8.500e-40
Identity = 90/106 (84.91%), Postives = 101/106 (95.28%), Query Frame = 1


		  
Query: 1   MNSAASHLASLLKRPSSTLNSVSSSLQQWRGIRVRVKNGNLEQALSFMQRKMTSSGIERM 60
           MN AASHLASLLK PSS +NSVSSSLQQWRGIR+RV++GNL+QALSFMQRKMTSSG+ER+
Sbjct: 1   MNLAASHLASLLKHPSSAMNSVSSSLQQWRGIRIRVRDGNLDQALSFMQRKMTSSGMERL 60

Query: 61  IKREETHHIKNSEKRVLARKALHRRLQSQDLGRKLKSILIKKVRGL 107
           IKRE+THHIKNSEKR++A+K LHRRLQSQDL RKLKSILIKKVRGL
Sbjct: 61  IKREQTHHIKNSEKRIIAQKNLHRRLQSQDLARKLKSILIKKVRGL 106

[Close]

BLAST of Spo05833.1 vs. NCBI nr
Match: gi|1021052910|gb|KZN10688.1| (hypothetical protein DCAR_003344 [Daucus carota subsp. sativus])

HSP 1 Score: 141.0 bits (354), Expect = 1.200e-30
Identity = 78/105 (74.29%), Postives = 92/105 (87.62%), Query Frame = 1


		  
Query: 1   MNSAASHLAS-LLKRPSSTLNSVSSSLQQWRGIRVRVKNGNLEQALSFMQRKMTSSGIER 60
           M+S AS L+S +LKRPS+ LNS+SS L QWRGIRVRV   NLE+AL+FMQR+MTSSG+ER
Sbjct: 1   MSSLASRLSSTVLKRPSTELNSLSSQLNQWRGIRVRVLQNNLERALTFMQRQMTSSGVER 60

Query: 61  MIKREETHHIKNSEKRVLARKALHRRLQSQDLGRKLKSILIKKVR 105
           +IK E+THHIKNSEKR+LARK L RRL+SQDL RKLKSIL+KKVR
Sbjct: 61  LIKHEQTHHIKNSEKRILARKNLERRLKSQDLARKLKSILMKKVR 105

[Close]

BLAST of Spo05833.1 vs. NCBI nr
Match: gi|731396728|ref|XP_010652624.1| (PREDICTED: uncharacterized protein LOC100855184 [Vitis vinifera])

HSP 1 Score: 137.9 bits (346), Expect = 1.000e-29
Identity = 75/106 (70.75%), Postives = 88/106 (83.02%), Query Frame = 1


		  
Query: 1   MNSAASHLASLLKRPSSTLNSVSSSLQQWRGIRVRVKNGNLEQALSFMQRKMTSSGIERM 60
           M+S   H++++ + PS   NS+S  LQQWRGIRV+V NGNLE AL  MQRKM SSGIER+
Sbjct: 1   MSSIVRHVSTIFRCPSLVPNSLSCELQQWRGIRVKVFNGNLESALVVMQRKMQSSGIERL 60

Query: 61  IKREETHHIKNSEKRVLARKALHRRLQSQDLGRKLKSILIKKVRGL 107
           IKRE+THHIKNSEKRVLARK L RR++SQDL RKLK+ILIKKVRGL
Sbjct: 61  IKREQTHHIKNSEKRVLARKNLERRIRSQDLARKLKAILIKKVRGL 106

[Close]

BLAST of Spo05833.1 vs. NCBI nr
Match: gi|1009153169|ref|XP_015894492.1| (PREDICTED: uncharacterized protein LOC107428472 [Ziziphus jujuba])

HSP 1 Score: 137.9 bits (346), Expect = 1.000e-29
Identity = 75/109 (68.81%), Postives = 90/109 (82.57%), Query Frame = 1


		  
Query: 1   MNSAASHLASLLKRPSSTLNSVS----SSLQQWRGIRVRVKNGNLEQALSFMQRKMTSSG 60
           MNS A H  SLLKRPS  + S+S      LQQWRGIRV+V NGNLE AL+FMQRKM SSG
Sbjct: 1   MNSIARHSTSLLKRPSQIVESLSFGNQHQLQQWRGIRVKVLNGNLESALTFMQRKMQSSG 60

Query: 61  IERMIKREETHHIKNSEKRVLARKALHRRLQSQDLGRKLKSILIKKVRG 106
           +ER+IKRE+THHIKNSEKR+LARK L R+++SQ+L RKL++IL+KKVRG
Sbjct: 61  MERLIKREQTHHIKNSEKRILARKNLERKIRSQELARKLQAILLKKVRG 109

[Close]

BLAST of Spo05833.1 vs. UniProtKB/TrEMBL
Match: A0A0K9S1T2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_003270 PE=4 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 1.100e-46
Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 1


		  
Query: 1   MNSAASHLASLLKRPSSTLNSVSSSLQQWRGIRVRVKNGNLEQALSFMQRKMTSSGIERM 60
           MNSAASHLASLLKRPSSTLNSVSSSLQQWRGIRVRVKNGNLEQALSFMQRKMTSSGIERM
Sbjct: 1   MNSAASHLASLLKRPSSTLNSVSSSLQQWRGIRVRVKNGNLEQALSFMQRKMTSSGIERM 60

Query: 61  IKREETHHIKNSEKRVLARKALHRRLQSQDLGRKLKSILIKKVRGL 107
           IKREETHHIKNSEKRVLARKALHRRLQSQDLGRKLKSILIKKVRGL
Sbjct: 61  IKREETHHIKNSEKRVLARKALHRRLQSQDLGRKLKSILIKKVRGL 106

[Close]

BLAST of Spo05833.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CDY8_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g119790 PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 5.900e-40
Identity = 90/106 (84.91%), Postives = 101/106 (95.28%), Query Frame = 1


		  
Query: 1   MNSAASHLASLLKRPSSTLNSVSSSLQQWRGIRVRVKNGNLEQALSFMQRKMTSSGIERM 60
           MN AASHLASLLK PSS +NSVSSSLQQWRGIR+RV++GNL+QALSFMQRKMTSSG+ER+
Sbjct: 1   MNLAASHLASLLKHPSSAMNSVSSSLQQWRGIRIRVRDGNLDQALSFMQRKMTSSGMERL 60

Query: 61  IKREETHHIKNSEKRVLARKALHRRLQSQDLGRKLKSILIKKVRGL 107
           IKRE+THHIKNSEKR++A+K LHRRLQSQDL RKLKSILIKKVRGL
Sbjct: 61  IKREQTHHIKNSEKRIIAQKNLHRRLQSQDLARKLKSILIKKVRGL 106

[Close]

BLAST of Spo05833.1 vs. UniProtKB/TrEMBL
Match: A0A166I2V9_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_003344 PE=4 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 8.500e-31
Identity = 78/105 (74.29%), Postives = 92/105 (87.62%), Query Frame = 1


		  
Query: 1   MNSAASHLAS-LLKRPSSTLNSVSSSLQQWRGIRVRVKNGNLEQALSFMQRKMTSSGIER 60
           M+S AS L+S +LKRPS+ LNS+SS L QWRGIRVRV   NLE+AL+FMQR+MTSSG+ER
Sbjct: 1   MSSLASRLSSTVLKRPSTELNSLSSQLNQWRGIRVRVLQNNLERALTFMQRQMTSSGVER 60

Query: 61  MIKREETHHIKNSEKRVLARKALHRRLQSQDLGRKLKSILIKKVR 105
           +IK E+THHIKNSEKR+LARK L RRL+SQDL RKLKSIL+KKVR
Sbjct: 61  LIKHEQTHHIKNSEKRILARKNLERRLKSQDLARKLKSILMKKVR 105

[Close]

BLAST of Spo05833.1 vs. UniProtKB/TrEMBL
Match: D7TR92_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0185g00140 PE=4 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 7.200e-30
Identity = 75/106 (70.75%), Postives = 88/106 (83.02%), Query Frame = 1


		  
Query: 1   MNSAASHLASLLKRPSSTLNSVSSSLQQWRGIRVRVKNGNLEQALSFMQRKMTSSGIERM 60
           M+S   H++++ + PS   NS+S  LQQWRGIRV+V NGNLE AL  MQRKM SSGIER+
Sbjct: 1   MSSIVRHVSTIFRCPSLVPNSLSCELQQWRGIRVKVFNGNLESALVVMQRKMQSSGIERL 60

Query: 61  IKREETHHIKNSEKRVLARKALHRRLQSQDLGRKLKSILIKKVRGL 107
           IKRE+THHIKNSEKRVLARK L RR++SQDL RKLK+ILIKKVRGL
Sbjct: 61  IKREQTHHIKNSEKRVLARKNLERRIRSQDLARKLKAILIKKVRGL 106

[Close]

BLAST of Spo05833.1 vs. UniProtKB/TrEMBL
Match: A0A067H3F1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g033045mg PE=4 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 1.800e-28
Identity = 76/112 (67.86%), Postives = 88/112 (78.57%), Query Frame = 1


		  
Query: 1   MNSAASHLASLLKRPSSTLNSVSSS------LQQWRGIRVRVKNGNLEQALSFMQRKMTS 60
           MNS    LA  L +PS  LN  S +      +QQWRGIRV+V NGNLEQALS+MQRKM S
Sbjct: 1   MNSVGRQLAGYLTQPSQGLNLFSRNQCQRHQVQQWRGIRVKVFNGNLEQALSWMQRKMQS 60

Query: 61  SGIERMIKREETHHIKNSEKRVLARKALHRRLQSQDLGRKLKSILIKKVRGL 107
           SGIER+IKRE+ HHIKNSEKRVLARK L R+++SQDL RKLK+IL+KKVRGL
Sbjct: 61  SGIERLIKREQRHHIKNSEKRVLARKNLERKIRSQDLARKLKAILVKKVRGL 112

[Close]

BLAST of Spo05833.1 vs. TAIR (Arabidopsis)
Match: AT3G26360.1 (Ribosomal protein S21 family protein)

HSP 1 Score: 106.3 bits (264), Expect = 1.200e-23
Identity = 61/106 (57.55%), Postives = 81/106 (76.42%), Query Frame = 1


		  
Query: 1   MNSAASHLASLLKRPSSTLNSVSSSLQQWRGIRVRVKNGNLEQALSFMQRKMTSSGIERM 60
           MN+ A  +  L+ RPS     ++  LQQ RGIRV+V + +L++AL+ +Q+KM SSG+ER+
Sbjct: 1   MNTIAKRVTGLVTRPS-----LNQQLQQERGIRVKVFSNDLDKALTILQKKMQSSGMERL 60

Query: 61  IKREETHHIKNSEKRVLARKALHRRLQSQDLGRKLKSILIKKVRGL 107
           IK  +THHIKNSEK+VLARK L RR++S D  RKL+SILIKKVRGL
Sbjct: 61  IKGTQTHHIKNSEKKVLARKNLERRIKSIDFARKLQSILIKKVRGL 101

The following BLAST results are available for this feature:

BLAST of Spo05833.1 vs. NCBI nr
BLAST of Spo05833.1 vs. UniProtKB/TrEMBL
BLAST of Spo05833.1 vs. ExPASy Swiss-Prot
BLAST of Spo05833.1 vs. TAIR (Arabidopsis)

BLAST of Spo05833.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902239764\|gb\|KNA25706.1\|	1.6e-46	100.	hypothetical protein SOVF_0032...	[more]
gi\|731336154\|ref\|XP_010679103.1\|	8.5e-40	84.9	PREDICTED: uncharacterized pro...	[more]
gi\|1021052910\|gb\|KZN10688.1\|	1.2e-30	74.2	hypothetical protein DCAR_0033...	[more]
gi\|731396728\|ref\|XP_010652624.1\|	1.0e-29	70.7	PREDICTED: uncharacterized pro...	[more]
gi\|1009153169\|ref\|XP_015894492.1\|	1.0e-29	68.8	PREDICTED: uncharacterized pro...	[more]

BLAST of Spo05833.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9S1T2_SPIOL	1.1e-46	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8CDY8_BETVU	5.9e-40	84.9	Uncharacterized protein OS=Bet...	[more]
A0A166I2V9_DAUCA	8.5e-31	74.2	Uncharacterized protein OS=Dau...	[more]
D7TR92_VITVI	7.2e-30	70.7	Putative uncharacterized prote...	[more]
A0A067H3F1_CITSI	1.8e-28	67.8	Uncharacterized protein OS=Cit...	[more]

BLAST of Spo05833.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Spo05833.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1


Match Name	E-value	Identity	Description
AT3G26360.1	1.2e-23	57.5	Ribosomal protein S21 family p...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001911	Ribosomal protein S21	PFAM	PF01165	Ribosomal_S21	coord: 34..86 score: 7.9
None	No IPR available	PANTHER	PTHR37228	FAMILY NOT NAMED	coord: 2..106 score: 1.1
None	No IPR available	PANTHER	PTHR37228:SF1	RIBOSOMAL PROTEIN S21 FAMILY PROTEIN	coord: 2..106 score: 1.1

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0006412	translation
biological_process	GO:0016126	sterol biosynthetic process
biological_process	GO:0010431	seed maturation
biological_process	GO:0006144	purine nucleobase metabolic process
biological_process	GO:0009832	plant-type cell wall biogenesis
biological_process	GO:0016310	phosphorylation
biological_process	GO:0006096	glycolytic process
biological_process	GO:0006094	gluconeogenesis
biological_process	GO:0030243	cellulose metabolic process
biological_process	GO:0016049	cell growth
biological_process	GO:0015976	carbon utilization
biological_process	GO:0006414	translational elongation
biological_process	GO:0006574	valine catabolic process
biological_process	GO:0006552	leucine catabolic process
biological_process	GO:0018874	benzoate metabolic process
biological_process	GO:0019482	beta-alanine metabolic process
biological_process	GO:0006635	fatty acid beta-oxidation
biological_process	GO:0006550	isoleucine catabolic process
biological_process	GO:0006633	fatty acid biosynthetic process
biological_process	GO:0046251	limonene catabolic process
biological_process	GO:0006554	lysine catabolic process
biological_process	GO:0006568	tryptophan metabolic process
cellular_component	GO:0009534	chloroplast thylakoid
cellular_component	GO:0005777	peroxisome
cellular_component	GO:0005840	ribosome
cellular_component	GO:0009570	chloroplast stroma
molecular_function	GO:0004300	enoyl-CoA hydratase activity
molecular_function	GO:0051750	delta3,5-delta2,4-dienoyl-CoA isomerase activity
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0000287	magnesium ion binding
molecular_function	GO:0030955	potassium ion binding
molecular_function	GO:0004743	pyruvate kinase activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo04908	0.76	Barchart \| Table
Spo17491	0.75	Barchart \| Table
Spo08589	0.74	Barchart \| Table
Spo06670	0.73	Barchart \| Table
Spo24414	0.73	Barchart \| Table
Spo17110	0.71	Barchart \| Table
Spo19459	0.71	Barchart \| Table
Spo06146	0.69	Barchart \| Table
Spo13731	0.68	Barchart \| Table
Spo00566	0.67	Barchart \| Table
Spo02278	0.67	Barchart \| Table
Spo09803	0.67	Barchart \| Table
Spo20163	0.67	Barchart \| Table
Spo12291	0.66	Barchart \| Table
Spo09536	0.66	Barchart \| Table
Spo18111	0.66	Barchart \| Table
Spo07114	0.66	Barchart \| Table
Spo28098	0.66	Barchart \| Table
Spo20387	0.66	Barchart \| Table
Spo21768	0.66	Barchart \| Table
Spo22715	0.66	Barchart \| Table
Spo23767	0.66	Barchart \| Table
Spo00872	0.66	Barchart \| Table
Spo07596	0.65	Barchart \| Table