Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTAGTGAGTCAATCCCAGAACTCGGAAATCACACAAAACGCGTCATTTAGACTCGTTATTAAACTCGGCCAAAAACCAAGTCAAGTCAATGACCAAAACACCCTTATGTATCCCCAAAATCATACACCTATACAACGGTCAATTTCGTCATAATATTAAAACCTTTATAATAAAATCAAAATTAATTTAATGGTTTATATAAATAAAAAGAACAGAAACGGCTATCTGCCTATCTCCCTAAAAAAGACAACTGCGCCCCATTACCATATATTCAGCCAGAGAAGCCTCTTCCTTTTTTCTCTGGAATTATAATTAAAAATTTTCATCTTTTTTCCCCCCTAAATTACTTCTATATTTTCCGCAGTTTTTCCTGATATTATTTGTTCATTTCTAGGAAAACGAATCGCCTGTAATCTCGCCAATCTAAGTTTATTTTGTTTAAGTTCCATCCAATTCTTTTTTTCTGGATATCGTTTTTTGGGGTGATTAGACGCTGATTTTTATTCAGAAAAATTGGTGAAAATTTTGTGGGATAGAAGAGAGAGATTGAGAGATTTTTTTTTTTAGAAAATACATTTCCGGGTTTAATTTGATTGGAAAAGTTTGGAAATTTGTTGTAATGTCGACGAAAACGGGTACGGCGAAGGATTTAGCAGAGAAAATGTTGTTGATGGCTGAACAAGGTGGACATTATTGCTCCAAAAAGACCGATAGTTTGTGCAAAGATTGTTGTTGCCAGGTAATTACTTTCTCTCTCTTGTTTTTTTTTTACAGATTTTGGGGATTATTTTTGTGATCTGGGTTCTCTTCGCATTATTGAAATTGTTTGATTGAAACCATTTAGTCTGTTTGATTAAATTTTTTGATTGAAACCCTTTAATCTGCTTGATTGAAATTGTGTAATTTATTGATTTTGATTATTAGTTTTACATGGGTATTTGTGAATCTTTGAATGTTCCTTAATTTCTTTGAATTTTCAGCTTTAGGGTTACCGGAGTTAATGACATTATGTGCCCCTGACTTTTCTTTGGATCTAATTGGGTTTGATTCTGATTTGGGTTTCTTCTGAAAATTTCAATGTTTTCCTTTGAAAAAATTGATTACCGTGTTTAATTTTCAATTCGATGTTTCTGATGATGAAGTAAGAACATGCTATTTGAATAACCAAGACAATTAGTGTCGAATTACCTTTAACAAATCAATGTATGCTTTTGTTTGATCTGAACTTTTAAACATGATGCTAATCAGTGAGTAACTAACGGATGACGATTTCTTTCTTTTCTAGCAGTCAAGCAAATCAAGCATGTCAAGATTATGCTGTGTTCTTCGAGGAATCGATTTGAAGATCTGCTTATTCCTGTTCTTGATCGTTCCAGTATGCACCATGGGTATCTACTTACATGGGCAGAAAATTACCTACTTTCTCCGACCACTTTGGGAAAAACCACCAAAACCTTTCAATGTAATTCCCCACTACTACAACGAAAATGTGACAATGGAAAATCTATGCAAGCTTCACGGTTGGGGAGTTCGTGATTACCCAAGACGAGTTTACGACGCTGTTCTCTTCAGCAATGAGGTCGACATGCTCCATGTCAGATGGCAGGAGTTGTACCCTTACATTACTCAGTTTGTTCTTCTTGAGTCCAACTCCACATTCACTGGAATACCAAAGCCTCTGGTTTTTGCTGCAAATAGAGATCAATTCAAATTCGTGGAGCCTCGTTTGACTTACGGGAATATTGGGGGTCGATTCGTTAAGGGAGAGAATCCGTTTGTTGAGGAAGCATATCAGCGTGTTGCATTGGATCAACTCATGAGAATCGCGGGTATTTCTGATGATGATTTATTGATAATGTCTGATGTTGATGAGATACCAAGTAGACATACCATCAATCTACTTAGATGGTGTGATGATACACCTGATATCCTACATTTACAGCTTAAGAACTATCTGTACTCGTTCGAATTTCTTGTGGATAACAACAGTTGGAGAGCTTCGATACACAAATACCAGACAGGGAAGACTAGATATGCTCATTTTAGGCAAACTGATGTTCAATTGGCAGATGCTGGGTGGCATTGCAGCTTTTGTTTCCGCCGTATAAGCGAGTTTATCTTCAAGATGAAAGCTTACAGCCATAGTGACAGAGTGAGATTCTCTCATTACTTAAACCCCAAAAGAATTCAGAGAGTAATCTGCAAAGGTGCAGACTTGTTCGATATGTTACCTGAAGAACACACATTTAAGGCAATAATCGGGAAGATGGGTCCTGTTCCTCATTCTTATTCTGCAGTTCATCTTCCATCGTATCTTTTGGAGAATGCTGATAAGTATAAGTTCCTATTGCCTGGAAATTGCCAGAGAGAAAGTGAATGAGCGCCTCGTTGAGCAGGGTTTTGGGTTCTTGTTTGACCAGAACATTTTAGGGGTGGTATTCCGATATACATTTGACCAGAACATTTTTCTCTGTGATGTTTGAGGGAATCACAAAATGGTCAAATCGGAGTTTTTGGGAGTTGTGTACATAATCTAATCAATCCCTGGGGCTCGGTTTTGGTTCGGAAGATTGGTACATAATCCAGTTGTTGCTCAATAGAGGGATCATGCCTTCATTGCTAGCTCGGTAATCTCATATACTCTCCTTTAGATTGAGAAACATGTGAGGCTGGTTTTCCAGCGAAAATTAGACAGTTTTGTGTTGTGGTTTTTAGACTAATATATCCAGTATATTCTCACCTCTGTCTTTGCTATACCGTGAATTCTATGGATTCTTTCTTCTGCTTCACTTATCATTTATCCAATTCCTTTATTTTCTGTTGTTTTTCTGTTCTTGAGTTTTCCTTTACCAAATCAGATGAAGAACAATCCATCTGTTCATTTGATGGGTGTTACTCATTCTTCTGGTAGATGGAAGATATTATCAGACAGCTGTAGTATTAGAATATAATGCTGGATTTGGAATTATTGCTTTTGTATTCGTATTCC TTTAGTGAGTCAATCCCAGAACTCGGAAATCACACAAAACGCGTCATTTAGACTCGTTATTAAACTCGGCCAAAAACCAAGTCAAGTCAATGACCAAAACACCCTTATGTATCCCCAAAATCATACACCTATACAACGGTCAATTTCGTCATAATATTAAAACCTTTATAATAAAATCAAAATTAATTTAATGGTTTATATAAATAAAAAGAACAGAAACGGCTATCTGCCTATCTCCCTAAAAAAGACAACTGCGCCCCATTACCATATATTCAGCCAGAGAAGCCTCTTCCTTTTTTCTCTGGAATTATAATTAAAAATTTTCATCTTTTTTCCCCCCTAAATTACTTCTATATTTTCCGCAGTTTTTCCTGATATTATTTGTTCATTTCTAGGAAAACGAATCGCCTGTAATCTCGCCAATCTAAGTTTATTTTGTTTAAGTTCCATCCAATTCTTTTTTTCTGGATATCGTTTTTTGGGGTGATTAGACGCTGATTTTTATTCAGAAAAATTGGTGAAAATTTTGTGGGATAGAAGAGAGAGATTGAGAGATTTTTTTTTTTAGAAAATACATTTCCGGGTTTAATTTGATTGGAAAAGTTTGGAAATTTGTTGTAATGTCGACGAAAACGGGTACGGCGAAGGATTTAGCAGAGAAAATGTTGTTGATGGCTGAACAAGGTGGACATTATTGCTCCAAAAAGACCGATAGTTTGTGCAAAGATTGTTGTTGCCAGCAGTCAAGCAAATCAAGCATGTCAAGATTATGCTGTGTTCTTCGAGGAATCGATTTGAAGATCTGCTTATTCCTGTTCTTGATCGTTCCAGTATGCACCATGGGTATCTACTTACATGGGCAGAAAATTACCTACTTTCTCCGACCACTTTGGGAAAAACCACCAAAACCTTTCAATGTAATTCCCCACTACTACAACGAAAATGTGACAATGGAAAATCTATGCAAGCTTCACGGTTGGGGAGTTCGTGATTACCCAAGACGAGTTTACGACGCTGTTCTCTTCAGCAATGAGGTCGACATGCTCCATGTCAGATGGCAGGAGTTGTACCCTTACATTACTCAGTTTGTTCTTCTTGAGTCCAACTCCACATTCACTGGAATACCAAAGCCTCTGGTTTTTGCTGCAAATAGAGATCAATTCAAATTCGTGGAGCCTCGTTTGACTTACGGGAATATTGGGGGTCGATTCGTTAAGGGAGAGAATCCGTTTGTTGAGGAAGCATATCAGCGTGTTGCATTGGATCAACTCATGAGAATCGCGGGTATTTCTGATGATGATTTATTGATAATGTCTGATGTTGATGAGATACCAAGTAGACATACCATCAATCTACTTAGATGGTGTGATGATACACCTGATATCCTACATTTACAGCTTAAGAACTATCTGTACTCGTTCGAATTTCTTGTGGATAACAACAGTTGGAGAGCTTCGATACACAAATACCAGACAGGGAAGACTAGATATGCTCATTTTAGGCAAACTGATGTTCAATTGGCAGATGCTGGGTGGCATTGCAGCTTTTGTTTCCGCCGTATAAGCGAGTTTATCTTCAAGATGAAAGCTTACAGCCATAGTGACAGAGTGAGATTCTCTCATTACTTAAACCCCAAAAGAATTCAGAGAGTAATCTGCAAAGGTGCAGACTTGTTCGATATGTTACCTGAAGAACACACATTTAAGGCAATAATCGGGAAGATGGGTCCTGTTCCTCATTCTTATTCTGCAGTTCATCTTCCATCGTATCTTTTGGAGAATGCTGATAAGTATAAGTTCCTATTGCCTGGAAATTGCCAGAGAGAAAGTGAATGAGCGCCTCGTTGAGCAGGGTTTTGGGTTCTTGTTTGACCAGAACATTTTAGGGGTGGTATTCCGATATACATTTGACCAGAACATTTTTCTCTGTGATGTTTGAGGGAATCACAAAATGGTCAAATCGGAGTTTTTGGGAGTTGTGTACATAATCTAATCAATCCCTGGGGCTCGGTTTTGGTTCGGAAGATTGGTACATAATCCAGTTGTTGCTCAATAGAGGGATCATGCCTTCATTGCTAGCTCGGTAATCTCATATACTCTCCTTTAGATTGAGAAACATGTGAGGCTGGTTTTCCAGCGAAAATTAGACAGTTTTGTGTTGTGGTTTTTAGACTAATATATCCAGTATATTCTCACCTCTGTCTTTGCTATACCGTGAATTCTATGGATTCTTTCTTCTGCTTCACTTATCATTTATCCAATTCCTTTATTTTCTGTTGTTTTTCTGTTCTTGAGTTTTCCTTTACCAAATCAGATGAAGAACAATCCATCTGTTCATTTGATGGGTGTTACTCATTCTTCTGGTAGATGGAAGATATTATCAGACAGCTGTAGTATTAGAATATAATGCTGGATTTGGAATTATTGCTTTTGTATTCGTATTCC ATGTCGACGAAAACGGGTACGGCGAAGGATTTAGCAGAGAAAATGTTGTTGATGGCTGAACAAGGTGGACATTATTGCTCCAAAAAGACCGATAGTTTGTGCAAAGATTGTTGTTGCCAGCAGTCAAGCAAATCAAGCATGTCAAGATTATGCTGTGTTCTTCGAGGAATCGATTTGAAGATCTGCTTATTCCTGTTCTTGATCGTTCCAGTATGCACCATGGGTATCTACTTACATGGGCAGAAAATTACCTACTTTCTCCGACCACTTTGGGAAAAACCACCAAAACCTTTCAATGTAATTCCCCACTACTACAACGAAAATGTGACAATGGAAAATCTATGCAAGCTTCACGGTTGGGGAGTTCGTGATTACCCAAGACGAGTTTACGACGCTGTTCTCTTCAGCAATGAGGTCGACATGCTCCATGTCAGATGGCAGGAGTTGTACCCTTACATTACTCAGTTTGTTCTTCTTGAGTCCAACTCCACATTCACTGGAATACCAAAGCCTCTGGTTTTTGCTGCAAATAGAGATCAATTCAAATTCGTGGAGCCTCGTTTGACTTACGGGAATATTGGGGGTCGATTCGTTAAGGGAGAGAATCCGTTTGTTGAGGAAGCATATCAGCGTGTTGCATTGGATCAACTCATGAGAATCGCGGGTATTTCTGATGATGATTTATTGATAATGTCTGATGTTGATGAGATACCAAGTAGACATACCATCAATCTACTTAGATGGTGTGATGATACACCTGATATCCTACATTTACAGCTTAAGAACTATCTGTACTCGTTCGAATTTCTTGTGGATAACAACAGTTGGAGAGCTTCGATACACAAATACCAGACAGGGAAGACTAGATATGCTCATTTTAGGCAAACTGATGTTCAATTGGCAGATGCTGGGTGGCATTGCAGCTTTTGTTTCCGCCGTATAAGCGAGTTTATCTTCAAGATGAAAGCTTACAGCCATAGTGACAGAGTGAGATTCTCTCATTACTTAAACCCCAAAAGAATTCAGAGAGTAATCTGCAAAGGTGCAGACTTGTTCGATATGTTACCTGAAGAACACACATTTAAGGCAATAATCGGGAAGATGGGTCCTGTTCCTCATTCTTATTCTGCAGTTCATCTTCCATCGTATCTTTTGGAGAATGCTGATAAGTATAAGTTCCTATTGCCTGGAAATTGCCAGAGAGAAAGTGAATGA MSTKTGTAKDLAEKMLLMAEQGGHYCSKKTDSLCKDCCCQQSSKSSMSRLCCVLRGIDLKICLFLFLIVPVCTMGIYLHGQKITYFLRPLWEKPPKPFNVIPHYYNENVTMENLCKLHGWGVRDYPRRVYDAVLFSNEVDMLHVRWQELYPYITQFVLLESNSTFTGIPKPLVFAANRDQFKFVEPRLTYGNIGGRFVKGENPFVEEAYQRVALDQLMRIAGISDDDLLIMSDVDEIPSRHTINLLRWCDDTPDILHLQLKNYLYSFEFLVDNNSWRASIHKYQTGKTRYAHFRQTDVQLADAGWHCSFCFRRISEFIFKMKAYSHSDRVRFSHYLNPKRIQRVICKGADLFDMLPEEHTFKAIIGKMGPVPHSYSAVHLPSYLLENADKYKFLLPGNCQRESE Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo05817.1 vs. NCBI nr
Match: gi|902239788|gb|KNA25730.1| (hypothetical protein SOVF_003470 isoform B [Spinacia oleracea]) HSP 1 Score: 824.7 bits (2129), Expect = 7.000e-236 Identity = 390/390 (100.00%), Postives = 390/390 (100.00%), Query Frame = 1
BLAST of Spo05817.1 vs. NCBI nr
Match: gi|902239787|gb|KNA25729.1| (hypothetical protein SOVF_003470 isoform A [Spinacia oleracea]) HSP 1 Score: 818.1 bits (2112), Expect = 6.600e-234 Identity = 389/390 (99.74%), Postives = 389/390 (99.74%), Query Frame = 1
BLAST of Spo05817.1 vs. NCBI nr
Match: gi|731342570|ref|XP_010682459.1| (PREDICTED: beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase isoform X1 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 809.7 bits (2090), Expect = 2.300e-231 Identity = 376/404 (93.07%), Postives = 396/404 (98.02%), Query Frame = 1
BLAST of Spo05817.1 vs. NCBI nr
Match: gi|731342572|ref|XP_010682460.1| (PREDICTED: beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase isoform X2 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 803.1 bits (2073), Expect = 2.200e-229 Identity = 375/404 (92.82%), Postives = 395/404 (97.77%), Query Frame = 1
BLAST of Spo05817.1 vs. NCBI nr
Match: gi|590695172|ref|XP_007044815.1| (Beta-1,4-N-acetylglucosaminyltransferase family protein [Theobroma cacao]) HSP 1 Score: 706.4 bits (1822), Expect = 2.800e-200 Identity = 325/388 (83.76%), Postives = 359/388 (92.53%), Query Frame = 1
BLAST of Spo05817.1 vs. UniProtKB/TrEMBL
Match: A0A0K9S1V3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_003470 PE=4 SV=1) HSP 1 Score: 824.7 bits (2129), Expect = 4.900e-236 Identity = 390/390 (100.00%), Postives = 390/390 (100.00%), Query Frame = 1
BLAST of Spo05817.1 vs. UniProtKB/TrEMBL
Match: A0A0K9S3D8_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_003470 PE=4 SV=1) HSP 1 Score: 818.1 bits (2112), Expect = 4.600e-234 Identity = 389/390 (99.74%), Postives = 389/390 (99.74%), Query Frame = 1
BLAST of Spo05817.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C2J6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g148460 PE=4 SV=1) HSP 1 Score: 809.7 bits (2090), Expect = 1.600e-231 Identity = 376/404 (93.07%), Postives = 396/404 (98.02%), Query Frame = 1
BLAST of Spo05817.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C6R4_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g148460 PE=4 SV=1) HSP 1 Score: 803.1 bits (2073), Expect = 1.500e-229 Identity = 375/404 (92.82%), Postives = 395/404 (97.77%), Query Frame = 1
BLAST of Spo05817.1 vs. UniProtKB/TrEMBL
Match: A0A061E8J3_THECC (Beta-1,4-N-acetylglucosaminyltransferase family protein OS=Theobroma cacao GN=TCM_010550 PE=4 SV=1) HSP 1 Score: 706.4 bits (1822), Expect = 1.900e-200 Identity = 325/388 (83.76%), Postives = 359/388 (92.53%), Query Frame = 1
BLAST of Spo05817.1 vs. ExPASy Swiss-Prot
Match: MGAT3_RAT (Beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase OS=Rattus norvegicus GN=Mgat3 PE=1 SV=2) HSP 1 Score: 77.4 bits (189), Expect = 4.000e-13 Identity = 48/154 (31.17%), Postives = 80/154 (51.95%), Query Frame = 1
BLAST of Spo05817.1 vs. ExPASy Swiss-Prot
Match: MGAT3_HUMAN (Beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase OS=Homo sapiens GN=MGAT3 PE=2 SV=3) HSP 1 Score: 77.0 bits (188), Expect = 5.200e-13 Identity = 48/154 (31.17%), Postives = 80/154 (51.95%), Query Frame = 1
BLAST of Spo05817.1 vs. ExPASy Swiss-Prot
Match: MGAT3_MOUSE (Beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase OS=Mus musculus GN=Mgat3 PE=2 SV=2) HSP 1 Score: 76.3 bits (186), Expect = 8.800e-13 Identity = 47/154 (30.52%), Postives = 80/154 (51.95%), Query Frame = 1
BLAST of Spo05817.1 vs. TAIR (Arabidopsis)
Match: AT1G12990.1 (beta-1,4-N-acetylglucosaminyltransferase family protein) HSP 1 Score: 684.1 bits (1764), Expect = 5.200e-197 Identity = 312/389 (80.21%), Postives = 353/389 (90.75%), Query Frame = 1
BLAST of Spo05817.1 vs. TAIR (Arabidopsis)
Match: AT1G67880.1 (beta-1,4-N-acetylglucosaminyltransferase family protein) HSP 1 Score: 659.4 bits (1700), Expect = 1.400e-189 Identity = 299/390 (76.67%), Postives = 351/390 (90.00%), Query Frame = 1
BLAST of Spo05817.1 vs. TAIR (Arabidopsis)
Match: AT3G27540.1 (beta-1,4-N-acetylglucosaminyltransferase family protein) HSP 1 Score: 644.8 bits (1662), Expect = 3.500e-185 Identity = 300/383 (78.33%), Postives = 336/383 (87.73%), Query Frame = 1
BLAST of Spo05817.1 vs. TAIR (Arabidopsis)
Match: AT5G14480.1 (beta-1,4-N-acetylglucosaminyltransferase family protein) HSP 1 Score: 622.5 bits (1604), Expect = 1.900e-178 Identity = 286/383 (74.67%), Postives = 327/383 (85.38%), Query Frame = 1
BLAST of Spo05817.1 vs. TAIR (Arabidopsis)
Match: AT3G01620.1 (beta-1,4-N-acetylglucosaminyltransferase family protein) HSP 1 Score: 607.1 bits (1564), Expect = 8.100e-174 Identity = 277/384 (72.14%), Postives = 332/384 (86.46%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo05817.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo05817.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo05817.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 3
BLAST of Spo05817.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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