Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ACGTTATGGGCCATCCTTTTCAGTTTATCACTACCCTAGTCGGCCTAGTGTGAATCAAAATCTGAGTGAGTAACCAACCTACGTCATTTTGGTCTTTCTAGTTTCTACCTTTAACCCTTTTCTTTCTCTTCCCTAAATCACAATTTCTTAACCCTATAAATAACGCCTCCATTCTGCCTTCTTTTAGGCTTGAGAAACACAACAACTTCTCAGTTCTCCCTCCATTTTCCCCCTTCTTCTCCCTCCTTTCTTACTGCCTCCTCTTTCTCTCTCCTCTCCAACAACAATTGTAAACTAGTTAACGGTAAACTTCAGTAGTTAACGGTAAACTTCAGTCAATATGGCAAGATCGTCACTCGAACCTCCTCTTTCACCTAAATCCACCATCAAATTCCTATGCAGTTATGGCGGTAAAATTGTCCCCCGTCATCCGGACGGCAAGCTCCGTTACCATGGCGGCCATACTCGCGTCCTCGCTGTTATTCCTTCTATCTCCTTCTCTGGTCAGTTCTATCTCCCTTCATTTGTATAATTTGATTTAATAAATTCGAGTTCATTGATTTCGGATGAAGAATTTTGAAGTAATTGGTTGTAAACCCTAGTTTTTGTGTGAATTTGATTGAGAAATTGCATGTTCACGTATTCAATTTTGTGTGATTATAGAATTTCAAGTTAGTAAGTGTGAATTATCCAACAGAGAAATTGCAAATAGTTCACTGATTTAAGTGTCATTTATGAGTTTGATAGAGAAATTGCAATTTATTCATTATTAAATCATGATTTGTTGACAGATTATTTGATTAAGAATTATAAGTGTGATTTGTTAGTCCAATTGTTGACAGATATTGTTAATGATTACAGAATTGATGTTGAAAATGGGAGAATTGTGCGGTGAGTCAGTGTATTTAAGGTGTCAACTACCATCCGAAGATCTAGATGCTCTGGTTTCCATAAAATCTGACGAAGATCTCGCTAATTTATTCGAAGAATACGATCGTCTTGCTTCGACATCGTCGATGAAAGTTAGAGCATTCCTTTTGCCGATTCGATCGTCAAAGATGACGACCGCTACAACGACAGCTAGTATTTCACCTCCGGCATCGCTGAAATCACTTTCGCCGAAATCGTTGTCGCCGTCGTCTTCATTCTCCGCCTCTGGATATTCGCCGAGAGTTGTGGCACCAGTGGTGGCGTATCCAGTCTGCTATGCGAAATCCGCTAGCAGAAATTGTCAACATTGCAGTCATAATTCCGGCCATATTTACCTCATTCACAACGGCAATCACTGGCAATAA ACGTTATGGGCCATCCTTTTCAGTTTATCACTACCCTAGTCGGCCTAGTGTGAATCAAAATCTGAGTGAGTAACCAACCTACGTCATTTTGGTCTTTCTAGTTTCTACCTTTAACCCTTTTCTTTCTCTTCCCTAAATCACAATTTCTTAACCCTATAAATAACGCCTCCATTCTGCCTTCTTTTAGGCTTGAGAAACACAACAACTTCTCAGTTCTCCCTCCATTTTCCCCCTTCTTCTCCCTCCTTTCTTACTGCCTCCTCTTTCTCTCTCCTCTCCAACAACAATTGTAAACTAGTTAACGGTAAACTTCAGTAGTTAACGGTAAACTTCAGTCAATATGGCAAGATCGTCACTCGAACCTCCTCTTTCACCTAAATCCACCATCAAATTCCTATGCAGTTATGGCGGTAAAATTGTCCCCCGTCATCCGGACGGCAAGCTCCGTTACCATGGCGGCCATACTCGCGTCCTCGCTGTTATTCCTTCTATCTCCTTCTCTGAATTGATGTTGAAAATGGGAGAATTGTGCGGTGAGTCAGTGTATTTAAGGTGTCAACTACCATCCGAAGATCTAGATGCTCTGGTTTCCATAAAATCTGACGAAGATCTCGCTAATTTATTCGAAGAATACGATCGTCTTGCTTCGACATCGTCGATGAAAGTTAGAGCATTCCTTTTGCCGATTCGATCGTCAAAGATGACGACCGCTACAACGACAGCTAGTATTTCACCTCCGGCATCGCTGAAATCACTTTCGCCGAAATCGTTGTCGCCGTCGTCTTCATTCTCCGCCTCTGGATATTCGCCGAGAGTTGTGGCACCAGTGGTGGCGTATCCAGTCTGCTATGCGAAATCCGCTAGCAGAAATTGTCAACATTGCAGTCATAATTCCGGCCATATTTACCTCATTCACAACGGCAATCACTGGCAATAA ATGGCAAGATCGTCACTCGAACCTCCTCTTTCACCTAAATCCACCATCAAATTCCTATGCAGTTATGGCGGTAAAATTGTCCCCCGTCATCCGGACGGCAAGCTCCGTTACCATGGCGGCCATACTCGCGTCCTCGCTGTTATTCCTTCTATCTCCTTCTCTGAATTGATGTTGAAAATGGGAGAATTGTGCGGTGAGTCAGTGTATTTAAGGTGTCAACTACCATCCGAAGATCTAGATGCTCTGGTTTCCATAAAATCTGACGAAGATCTCGCTAATTTATTCGAAGAATACGATCGTCTTGCTTCGACATCGTCGATGAAAGTTAGAGCATTCCTTTTGCCGATTCGATCGTCAAAGATGACGACCGCTACAACGACAGCTAGTATTTCACCTCCGGCATCGCTGAAATCACTTTCGCCGAAATCGTTGTCGCCGTCGTCTTCATTCTCCGCCTCTGGATATTCGCCGAGAGTTGTGGCACCAGTGGTGGCGTATCCAGTCTGCTATGCGAAATCCGCTAGCAGAAATTGTCAACATTGCAGTCATAATTCCGGCCATATTTACCTCATTCACAACGGCAATCACTGGCAATAA MARSSLEPPLSPKSTIKFLCSYGGKIVPRHPDGKLRYHGGHTRVLAVIPSISFSELMLKMGELCGESVYLRCQLPSEDLDALVSIKSDEDLANLFEEYDRLASTSSMKVRAFLLPIRSSKMTTATTTASISPPASLKSLSPKSLSPSSSFSASGYSPRVVAPVVAYPVCYAKSASRNCQHCSHNSGHIYLIHNGNHWQ Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo05812.1 vs. NCBI nr
Match: gi|902194238|gb|KNA12495.1| (hypothetical protein SOVF_125260 [Spinacia oleracea]) HSP 1 Score: 389.0 bits (998), Expect = 4.800e-105 Identity = 198/198 (100.00%), Postives = 198/198 (100.00%), Query Frame = 1
BLAST of Spo05812.1 vs. NCBI nr
Match: gi|731342542|ref|XP_010682446.1| (PREDICTED: uncharacterized protein LOC104897290 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 284.3 bits (726), Expect = 1.700e-73 Identity = 150/203 (73.89%), Postives = 168/203 (82.76%), Query Frame = 1
BLAST of Spo05812.1 vs. NCBI nr
Match: gi|590695119|ref|XP_007044801.1| (Octicosapeptide/Phox/Bem1p family protein isoform 1 [Theobroma cacao]) HSP 1 Score: 205.7 bits (522), Expect = 7.600e-50 Identity = 119/201 (59.20%), Postives = 139/201 (69.15%), Query Frame = 1
BLAST of Spo05812.1 vs. NCBI nr
Match: gi|1009153481|ref|XP_015894659.1| (PREDICTED: uncharacterized protein LOC107428606 [Ziziphus jujuba]) HSP 1 Score: 199.1 bits (505), Expect = 7.100e-48 Identity = 119/202 (58.91%), Postives = 139/202 (68.81%), Query Frame = 1
BLAST of Spo05812.1 vs. NCBI nr
Match: gi|629122166|gb|KCW86656.1| (hypothetical protein EUGRSUZ_B03284, partial [Eucalyptus grandis]) HSP 1 Score: 197.2 bits (500), Expect = 2.700e-47 Identity = 122/220 (55.45%), Postives = 141/220 (64.09%), Query Frame = 1
BLAST of Spo05812.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QZ10_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_125260 PE=4 SV=1) HSP 1 Score: 389.0 bits (998), Expect = 3.400e-105 Identity = 198/198 (100.00%), Postives = 198/198 (100.00%), Query Frame = 1
BLAST of Spo05812.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C6P1_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g148340 PE=4 SV=1) HSP 1 Score: 284.3 bits (726), Expect = 1.200e-73 Identity = 150/203 (73.89%), Postives = 168/203 (82.76%), Query Frame = 1
BLAST of Spo05812.1 vs. UniProtKB/TrEMBL
Match: A0A061E7N2_THECC (Octicosapeptide/Phox/Bem1p family protein isoform 1 OS=Theobroma cacao GN=TCM_010524 PE=4 SV=1) HSP 1 Score: 205.7 bits (522), Expect = 5.300e-50 Identity = 119/201 (59.20%), Postives = 139/201 (69.15%), Query Frame = 1
BLAST of Spo05812.1 vs. UniProtKB/TrEMBL
Match: A0A059D8A5_EUCGR (Uncharacterized protein (Fragment) OS=Eucalyptus grandis GN=EUGRSUZ_B03284 PE=4 SV=1) HSP 1 Score: 197.2 bits (500), Expect = 1.900e-47 Identity = 122/220 (55.45%), Postives = 141/220 (64.09%), Query Frame = 1
BLAST of Spo05812.1 vs. UniProtKB/TrEMBL
Match: A0A0D2RH40_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G178300 PE=4 SV=1) HSP 1 Score: 193.0 bits (489), Expect = 3.500e-46 Identity = 115/198 (58.08%), Postives = 135/198 (68.18%), Query Frame = 1
BLAST of Spo05812.1 vs. TAIR (Arabidopsis)
Match: AT1G70640.1 (octicosapeptide/Phox/Bem1p (PB1) domain-containing protein) HSP 1 Score: 152.5 bits (384), Expect = 2.700e-37 Identity = 93/183 (50.82%), Postives = 121/183 (66.12%), Query Frame = 1
BLAST of Spo05812.1 vs. TAIR (Arabidopsis)
Match: AT5G63130.1 (Octicosapeptide/Phox/Bem1p family protein) HSP 1 Score: 134.8 bits (338), Expect = 5.800e-32 Identity = 77/140 (55.00%), Postives = 98/140 (70.00%), Query Frame = 1
BLAST of Spo05812.1 vs. TAIR (Arabidopsis)
Match: AT3G48240.1 (Octicosapeptide/Phox/Bem1p family protein) HSP 1 Score: 131.0 bits (328), Expect = 8.300e-31 Identity = 75/155 (48.39%), Postives = 94/155 (60.65%), Query Frame = 1
BLAST of Spo05812.1 vs. TAIR (Arabidopsis)
Match: AT5G49920.1 (Octicosapeptide/Phox/Bem1p family protein) HSP 1 Score: 107.1 bits (266), Expect = 1.300e-23 Identity = 53/102 (51.96%), Postives = 72/102 (70.59%), Query Frame = 1
BLAST of Spo05812.1 vs. TAIR (Arabidopsis)
Match: AT3G46920.1 (Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain) HSP 1 Score: 105.5 bits (262), Expect = 3.800e-23 Identity = 53/109 (48.62%), Postives = 74/109 (67.89%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo05812.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo05812.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo05812.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 0
BLAST of Spo05812.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
|