Spo05684 (gene)

Overview
NameSpo05684
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionRubredoxin family protein
Locationchr5 : 14341890 .. 14343781 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTGGGATCTTTCTAGGCTCCTATAGAAGATAAGAAAAGCACAAAAAAGAGATGAGAGCGTGTGGGAAGTGAGGATGCCACGCTTTCAAGTTTCAATTCCAAACACAAACCAAATCCCACTTGCAATTTCCCTTACAATTTTCACCATTTGCCTCCACTCCATCAACAACCTCCCCTTATCTTCTAGGAAGCTTAAATCCGAAATCCAAAACCCCATTATTAACGATTATTGTTGCATTAACAAAGGATCATGGCAATGACAGTACAGTTGCAGCAGCAAGCAGCTACAACTGCAGCTACTGCAAGCAAGTCATGGAGTATACCTTCAGCACTGGTGCCTCCTGCAGGTACCAGCATCGGCCTCAGGCGTGCTGCTGATCGCTTCGCACTGCGATCATCTTTCTCGTCTTCCTCCCTCCGTCTTCCAAGTGTCAATGTTACTGCTGCCCCTAAATTCTCTATGCGTGTTGCATCCAAACAGGCCTACATCTGCCGTGATTGTGGGTCAGTCACTCACTCACTAGCTCTTTCTGTTTCACTATGCAATCCTGTTTTTATTTCTTGCATTAATGGCTGAACTGAACTGATTGTCATCCAGATATATTTACAACGATCCTCGGAAACCTTTCGAGAAATTACCAGACAATTTCTTCTGTGCTGGTAAGTCAGATCCCCCCATCAGTTTCATAACAATAAATCACTAATTGCATATTAGAAAATTAATGTTGCAAGAAGCAGGAAGTAGACTGGTTATGTTGGAAAATTTTCGGAGATTTAAATTGGAAATTTGGAAGTTGAACAGATTAAATATACTACACAGCAAACTAGGATGAATACCATAATTGAAAACCTGTGCAGTATGCGGTGCTCCAAAGCGCAGATTCAGGCCATATGACCCTCCTGTAACCAAGAATGTCAATGACAAAAATGTTCGAAAAGCAAGGAAAGAACAGATTAAACAAGATGAAGCTATTGGGTAACACAATCAGATTCTGCGTTGCCTGTATTCTGTTTTCTTCACTTCTGTAGGTCTTCTGCATTTTAAAAGTTCTGATGTCATTTCCTTGTTTTTCCTTCTCTTATGCAGGAAAGCTTTGCCTATTGCCATTGTTGTTGGAATCGCCATACTCGGTGGTGTTTACTTCTACCTCAACAGCACCTTCTAAGGTCTCAGATCGAAGTTTTGTACTCAGCACAGCTTATTCATAATACCCTGTATTTTGGACCTCCTTTAACATCAATAGCCGCAATCTCTTATTCTTTTTGTATAATCGTATTATCAAGAAATATTGAAGTACAAACTTAAAGAAAGCATATAAAAACAATTTACTATGTCATCTCCATTCCTTAGTTTTCAAGGACTTTGGCAGATTTCATTCCACTGACATTGGAAACTGTAAGTCTGTAATCCCTAATAGTCTGCCAAAGCTGATTTGCAGAAGAAGTTACTGGTCCATCAGCTTCTTGTTTCTAAGACATGGAGTTGGCAGATACACTTCATGCATCACATTTGCCAAGCAGATTTTACTAAATACAGTCTCTGGCCTGTGCATATAAAACTCTTCCAGGGAAGAGCATCTGCAGAAAAAGTCGAAATTAACTGCCTCTTGTTTCTAAGATTGAGAAAACTTGGATCTTCAATCATATACACCTCAACAAACCCAAAAATAGTAGTCCATCAAAGTCGCAGTTAGATCACCTCTGCAACTGAAAGTCTAGTACACGAGAAGTCTCAAATTAACACTGAAATCAAGACCCCCGTCTGGTTTTCTGTCATAATGCTGCAGGACAAAAAAATTACTTAAACTATCAGACATGATAAAAGACACAGTCATTTTTTTCCCGTGTATTGCAGAGAAGAGGTGAGGGGGTAATCTGCAAGTTAGTAACAGG

mRNA sequence

TTGGGATCTTTCTAGGCTCCTATAGAAGATAAGAAAAGCACAAAAAAGAGATGAGAGCGTGTGGGAAGTGAGGATGCCACGCTTTCAAGTTTCAATTCCAAACACAAACCAAATCCCACTTGCAATTTCCCTTACAATTTTCACCATTTGCCTCCACTCCATCAACAACCTCCCCTTATCTTCTAGGAAGCTTAAATCCGAAATCCAAAACCCCATTATTAACGATTATTGTTGCATTAACAAAGGATCATGGCAATGACAGTACAGTTGCAGCAGCAAGCAGCTACAACTGCAGCTACTGCAAGCAAGTCATGGAGTATACCTTCAGCACTGGTGCCTCCTGCAGGTACCAGCATCGGCCTCAGGCGTGCTGCTGATCGCTTCGCACTGCGATCATCTTTCTCGTCTTCCTCCCTCCGTCTTCCAAGTGTCAATGTTACTGCTGCCCCTAAATTCTCTATGCGTGTTGCATCCAAACAGGCCTACATCTGCCGTGATTGTGGATATATTTACAACGATCCTCGGAAACCTTTCGAGAAATTACCAGACAATTTCTTCTGTGCTGTATGCGGTGCTCCAAAGCGCAGATTCAGGCCATATGACCCTCCTGTAACCAAGAATGTCAATGACAAAAATGTTCGAAAAGCAAGGAAAGAACAGATTAAACAAGATGAAGCTATTGGGAAAGCTTTGCCTATTGCCATTGTTGTTGGAATCGCCATACTCGGTGGTGTTTACTTCTACCTCAACAGCACCTTCTAAGGTCTCAGATCGAAGTTTTGTACTCAGCACAGCTTATTCATAATACCCTGTATTTTGGACCTCCTTTAACATCAATAGCCGCAATCTCTTATTCTTTTTGTATAATCGTATTATCAAGAAATATTGAAGTACAAACTTAAAGAAAGCATATAAAAACAATTTACTATGTCATCTCCATTCCTTAGTTTTCAAGGACTTTGGCAGATTTCATTCCACTGACATTGGAAACTGTAAGTCTGTAATCCCTAATAGTCTGCCAAAGCTGATTTGCAGAAGAAGTTACTGGTCCATCAGCTTCTTGTTTCTAAGACATGGAGTTGGCAGATACACTTCATGCATCACATTTGCCAAGCAGATTTTACTAAATACAGTCTCTGGCCTGTGCATATAAAACTCTTCCAGGGAAGAGCATCTGCAGAAAAAGTCGAAATTAACTGCCTCTTGTTTCTAAGATTGAGAAAACTTGGATCTTCAATCATATACACCTCAACAAACCCAAAAATAGTAGTCCATCAAAGTCGCAGTTAGATCACCTCTGCAACTGAAAGTCTAGTACACGAGAAGTCTCAAATTAACACTGAAATCAAGACCCCCGTCTGGTTTTCTGTCATAATGCTGCAGGACAAAAAAATTACTTAAACTATCAGACATGATAAAAGACACAGTCATTTTTTTCCCGTGTATTGCAGAGAAGAGGTGAGGGGGTAATCTGCAAGTTAGTAACAGG

Coding sequence (CDS)

ATGGCAATGACAGTACAGTTGCAGCAGCAAGCAGCTACAACTGCAGCTACTGCAAGCAAGTCATGGAGTATACCTTCAGCACTGGTGCCTCCTGCAGGTACCAGCATCGGCCTCAGGCGTGCTGCTGATCGCTTCGCACTGCGATCATCTTTCTCGTCTTCCTCCCTCCGTCTTCCAAGTGTCAATGTTACTGCTGCCCCTAAATTCTCTATGCGTGTTGCATCCAAACAGGCCTACATCTGCCGTGATTGTGGATATATTTACAACGATCCTCGGAAACCTTTCGAGAAATTACCAGACAATTTCTTCTGTGCTGTATGCGGTGCTCCAAAGCGCAGATTCAGGCCATATGACCCTCCTGTAACCAAGAATGTCAATGACAAAAATGTTCGAAAAGCAAGGAAAGAACAGATTAAACAAGATGAAGCTATTGGGAAAGCTTTGCCTATTGCCATTGTTGTTGGAATCGCCATACTCGGTGGTGTTTACTTCTACCTCAACAGCACCTTCTAA

Protein sequence

MAMTVQLQQQAATTAATASKSWSIPSALVPPAGTSIGLRRAADRFALRSSFSSSSLRLPSVNVTAAPKFSMRVASKQAYICRDCGYIYNDPRKPFEKLPDNFFCAVCGAPKRRFRPYDPPVTKNVNDKNVRKARKEQIKQDEAIGKALPIAIVVGIAILGGVYFYLNSTF
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo05684.1Spo05684.1mRNA


Homology
[Close]
BLAST of Spo05684.1 vs. NCBI nr
Match: gi|902186000|gb|KNA10600.1| (hypothetical protein SOVF_142920 [Spinacia oleracea])

HSP 1 Score: 331.3 bits (848), Expect = 1.000e-87
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 1 

		  

Query: 1   MAMTVQLQQQAATTAATASKSWSIPSALVPPAGTSIGLRRAADRFALRSSFSSSSLRLPS 60
           MAMTVQLQQQAATTAATASKSWSIPSALVPPAGTSIGLRRAADRFALRSSFSSSSLRLPS
Sbjct: 1   MAMTVQLQQQAATTAATASKSWSIPSALVPPAGTSIGLRRAADRFALRSSFSSSSLRLPS 60

Query: 61  VNVTAAPKFSMRVASKQAYICRDCGYIYNDPRKPFEKLPDNFFCAVCGAPKRRFRPYDPP 120
           VNVTAAPKFSMRVASKQAYICRDCGYIYNDPRKPFEKLPDNFFCAVCGAPKRRFRPYDPP
Sbjct: 61  VNVTAAPKFSMRVASKQAYICRDCGYIYNDPRKPFEKLPDNFFCAVCGAPKRRFRPYDPP 120

Query: 121 VTKNVNDKNVRKARKEQIKQDEAIGKALPIAIVVGIAILGGVYFYLNSTF 171
           VTKNVNDKNVRKARKEQIKQDEAIGKALPIAIVVGIAILGGVYFYLNSTF
Sbjct: 121 VTKNVNDKNVRKARKEQIKQDEAIGKALPIAIVVGIAILGGVYFYLNSTF 170
[Close]
BLAST of Spo05684.1 vs. NCBI nr
Match: gi|731374626|ref|XP_010667019.1| (PREDICTED: uncharacterized protein LOC104884122 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 287.3 bits (734), Expect = 1.700e-74
Identity = 146/170 (85.88%), Postives = 159/170 (93.53%), Query Frame = 1 

		  

Query: 1   MAMTVQLQQQAATTAATASKSWSIPSALVPPAGTSIGLRRAADRFALRSSFSSSSLRLPS 60
           MA+T+QLQQQA  T ATASKSW+IPSAL+PP GTSIGLRR ADRFALRSSFSSSSLRLPS
Sbjct: 1   MAITMQLQQQA--TTATASKSWTIPSALLPPTGTSIGLRRPADRFALRSSFSSSSLRLPS 60

Query: 61  VNVTAAPKFSMRVASKQAYICRDCGYIYNDPRKPFEKLPDNFFCAVCGAPKRRFRPYDPP 120
           VNV+AAPKFSMRVASKQ+YICRDCGYIYND RKPFEKLPDN++C VCGAPKRRFR Y+PP
Sbjct: 61  VNVSAAPKFSMRVASKQSYICRDCGYIYNDTRKPFEKLPDNYYCPVCGAPKRRFRAYEPP 120

Query: 121 VTKNVNDKNVRKARKEQIKQDEAIGKALPIAIVVGIAILGGVYFYLNSTF 171
           VTKN ND +VRKARK QIK+DEAIGKALPIAI+VGIA+LGGVYFYLNSTF
Sbjct: 121 VTKNANDADVRKARKAQIKKDEAIGKALPIAILVGIALLGGVYFYLNSTF 168
[Close]
BLAST of Spo05684.1 vs. NCBI nr
Match: gi|567888904|ref|XP_006436974.1| (hypothetical protein CICLE_v10032925mg [Citrus clementina])

HSP 1 Score: 203.8 bits (517), Expect = 2.500e-49
Identity = 108/165 (65.45%), Postives = 125/165 (75.76%), Query Frame = 1 

		  

Query: 12  ATTAATASKSWSIPSALVPPAGTSIGLRRAADRFALRSSFSSSSLRL------PSVNVTA 71
           A T A ++ + S P  L+ P G + GLRR ADRFAL+SSFS+ SL L        +  +A
Sbjct: 5   APTRALSTTNSSTPPPLLAPTGNNAGLRRPADRFALKSSFSAPSLHLLLSPPHQQLLASA 64

Query: 72  APKFSMRVASKQAYICRDCGYIYNDPRKPFEKLPDNFFCAVCGAPKRRFRPYDPPVTKNV 131
           APKFSMRVASKQAYICRDCGYIYN+ RKPF++LPDN+FC VCGAPKRRFRPY P VT+  
Sbjct: 65  APKFSMRVASKQAYICRDCGYIYNE-RKPFDQLPDNYFCPVCGAPKRRFRPYTPAVTRGA 124

Query: 132 NDKNVRKARKEQIKQDEAIGKALPIAIVVGIAILGGVYFYLNSTF 171
           ND  VRKARKEQI++DEAIGKALPIAI V    L G+YFYLNS F
Sbjct: 125 NDTAVRKARKEQIQRDEAIGKALPIAIAVAAVALAGLYFYLNSAF 168
[Close]
BLAST of Spo05684.1 vs. NCBI nr
Match: gi|641838699|gb|KDO57638.1| (hypothetical protein CISIN_1g040420mg [Citrus sinensis])

HSP 1 Score: 203.4 bits (516), Expect = 3.200e-49
Identity = 108/166 (65.06%), Postives = 125/166 (75.30%), Query Frame = 1 

		  

Query: 12  ATTAATASKSWSIPSALVPPAGTSIGLRRAADRFALRSSFSSSSLRL-------PSVNVT 71
           A T A ++ + S P  L+ P G + GLRR ADRFAL+SSFS+ SL L         +  +
Sbjct: 5   APTRALSTTNSSTPPPLLAPTGNNAGLRRPADRFALKSSFSAPSLHLLLSPPHQQQLLAS 64

Query: 72  AAPKFSMRVASKQAYICRDCGYIYNDPRKPFEKLPDNFFCAVCGAPKRRFRPYDPPVTKN 131
           AAPKFSMRVASKQAYICRDCGYIYN+ RKPF++LPDN+FC VCGAPKRRFRPY P VT+ 
Sbjct: 65  AAPKFSMRVASKQAYICRDCGYIYNE-RKPFDQLPDNYFCPVCGAPKRRFRPYTPAVTRG 124

Query: 132 VNDKNVRKARKEQIKQDEAIGKALPIAIVVGIAILGGVYFYLNSTF 171
            ND  VRKARKEQI++DEAIGKALPIAI V    L G+YFYLNS F
Sbjct: 125 ANDTAVRKARKEQIQRDEAIGKALPIAIAVAAVALAGLYFYLNSAF 169
[Close]
BLAST of Spo05684.1 vs. NCBI nr
Match: gi|224134208|ref|XP_002321763.1| (rubredoxin family protein [Populus trichocarpa])

HSP 1 Score: 199.9 bits (507), Expect = 3.600e-48
Identity = 109/177 (61.58%), Postives = 132/177 (74.58%), Query Frame = 1 

		  

Query: 1   MAMTVQLQQQAATTAATASKSWSIPSALVPPAGTSIGLRRAADRFALRSSFSSSSLRL-- 60
           MA+   ++ QA  T        S P +L+ P G ++GL+   DRFAL+SSF S SL L  
Sbjct: 1   MALHAPIRLQATKT--------SPPPSLLAPNGNNVGLKGPTDRFALKSSFFSPSLHLLI 60

Query: 61  PSVN-----VTAAPKFSMRVASKQAYICRDCGYIYNDPRKPFEKLPDNFFCAVCGAPKRR 120
            S N      +AAP+FSMR A+KQAYICRDCGYIYND RKPF+K PDN+FC VCGAPKRR
Sbjct: 61  ASYNQQQPLASAAPRFSMRAATKQAYICRDCGYIYND-RKPFDKQPDNYFCPVCGAPKRR 120

Query: 121 FRPYDPPVTKNVNDKNVRKARKEQIKQDEAIGKALPIAIVVGIAILGGVYFYLNSTF 171
           FR Y P VTKNVNDK+VRKARKEQI++DEAIG+ALPIA+VVGI  L G+YFY+N++F
Sbjct: 121 FREYMPAVTKNVNDKDVRKARKEQIQKDEAIGRALPIAVVVGIVALAGIYFYINNSF 168
[Close]
BLAST of Spo05684.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QTP2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_142920 PE=4 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 7.100e-88
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 1 

		  

Query: 1   MAMTVQLQQQAATTAATASKSWSIPSALVPPAGTSIGLRRAADRFALRSSFSSSSLRLPS 60
           MAMTVQLQQQAATTAATASKSWSIPSALVPPAGTSIGLRRAADRFALRSSFSSSSLRLPS
Sbjct: 1   MAMTVQLQQQAATTAATASKSWSIPSALVPPAGTSIGLRRAADRFALRSSFSSSSLRLPS 60

Query: 61  VNVTAAPKFSMRVASKQAYICRDCGYIYNDPRKPFEKLPDNFFCAVCGAPKRRFRPYDPP 120
           VNVTAAPKFSMRVASKQAYICRDCGYIYNDPRKPFEKLPDNFFCAVCGAPKRRFRPYDPP
Sbjct: 61  VNVTAAPKFSMRVASKQAYICRDCGYIYNDPRKPFEKLPDNFFCAVCGAPKRRFRPYDPP 120

Query: 121 VTKNVNDKNVRKARKEQIKQDEAIGKALPIAIVVGIAILGGVYFYLNSTF 171
           VTKNVNDKNVRKARKEQIKQDEAIGKALPIAIVVGIAILGGVYFYLNSTF
Sbjct: 121 VTKNVNDKNVRKARKEQIKQDEAIGKALPIAIVVGIAILGGVYFYLNSTF 170
[Close]
BLAST of Spo05684.1 vs. UniProtKB/TrEMBL
Match: A0A0J8B6V5_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_006130 PE=4 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 1.200e-74
Identity = 146/170 (85.88%), Postives = 159/170 (93.53%), Query Frame = 1 

		  

Query: 1   MAMTVQLQQQAATTAATASKSWSIPSALVPPAGTSIGLRRAADRFALRSSFSSSSLRLPS 60
           MA+T+QLQQQA  T ATASKSW+IPSAL+PP GTSIGLRR ADRFALRSSFSSSSLRLPS
Sbjct: 1   MAITMQLQQQA--TTATASKSWTIPSALLPPTGTSIGLRRPADRFALRSSFSSSSLRLPS 60

Query: 61  VNVTAAPKFSMRVASKQAYICRDCGYIYNDPRKPFEKLPDNFFCAVCGAPKRRFRPYDPP 120
           VNV+AAPKFSMRVASKQ+YICRDCGYIYND RKPFEKLPDN++C VCGAPKRRFR Y+PP
Sbjct: 61  VNVSAAPKFSMRVASKQSYICRDCGYIYNDTRKPFEKLPDNYYCPVCGAPKRRFRAYEPP 120

Query: 121 VTKNVNDKNVRKARKEQIKQDEAIGKALPIAIVVGIAILGGVYFYLNSTF 171
           VTKN ND +VRKARK QIK+DEAIGKALPIAI+VGIA+LGGVYFYLNSTF
Sbjct: 121 VTKNANDADVRKARKAQIKKDEAIGKALPIAILVGIALLGGVYFYLNSTF 168
[Close]
BLAST of Spo05684.1 vs. UniProtKB/TrEMBL
Match: V4VCY7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032925mg PE=4 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 1.700e-49
Identity = 108/165 (65.45%), Postives = 125/165 (75.76%), Query Frame = 1 

		  

Query: 12  ATTAATASKSWSIPSALVPPAGTSIGLRRAADRFALRSSFSSSSLRL------PSVNVTA 71
           A T A ++ + S P  L+ P G + GLRR ADRFAL+SSFS+ SL L        +  +A
Sbjct: 5   APTRALSTTNSSTPPPLLAPTGNNAGLRRPADRFALKSSFSAPSLHLLLSPPHQQLLASA 64

Query: 72  APKFSMRVASKQAYICRDCGYIYNDPRKPFEKLPDNFFCAVCGAPKRRFRPYDPPVTKNV 131
           APKFSMRVASKQAYICRDCGYIYN+ RKPF++LPDN+FC VCGAPKRRFRPY P VT+  
Sbjct: 65  APKFSMRVASKQAYICRDCGYIYNE-RKPFDQLPDNYFCPVCGAPKRRFRPYTPAVTRGA 124

Query: 132 NDKNVRKARKEQIKQDEAIGKALPIAIVVGIAILGGVYFYLNSTF 171
           ND  VRKARKEQI++DEAIGKALPIAI V    L G+YFYLNS F
Sbjct: 125 NDTAVRKARKEQIQRDEAIGKALPIAIAVAAVALAGLYFYLNSAF 168
[Close]
BLAST of Spo05684.1 vs. UniProtKB/TrEMBL
Match: A0A067ER95_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g040420mg PE=4 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 2.200e-49
Identity = 108/166 (65.06%), Postives = 125/166 (75.30%), Query Frame = 1 

		  

Query: 12  ATTAATASKSWSIPSALVPPAGTSIGLRRAADRFALRSSFSSSSLRL-------PSVNVT 71
           A T A ++ + S P  L+ P G + GLRR ADRFAL+SSFS+ SL L         +  +
Sbjct: 5   APTRALSTTNSSTPPPLLAPTGNNAGLRRPADRFALKSSFSAPSLHLLLSPPHQQQLLAS 64

Query: 72  AAPKFSMRVASKQAYICRDCGYIYNDPRKPFEKLPDNFFCAVCGAPKRRFRPYDPPVTKN 131
           AAPKFSMRVASKQAYICRDCGYIYN+ RKPF++LPDN+FC VCGAPKRRFRPY P VT+ 
Sbjct: 65  AAPKFSMRVASKQAYICRDCGYIYNE-RKPFDQLPDNYFCPVCGAPKRRFRPYTPAVTRG 124

Query: 132 VNDKNVRKARKEQIKQDEAIGKALPIAIVVGIAILGGVYFYLNSTF 171
            ND  VRKARKEQI++DEAIGKALPIAI V    L G+YFYLNS F
Sbjct: 125 ANDTAVRKARKEQIQRDEAIGKALPIAIAVAAVALAGLYFYLNSAF 169
[Close]
BLAST of Spo05684.1 vs. UniProtKB/TrEMBL
Match: A0A0B0MS74_GOSAR (Putative beta-1,4-xylosyltransferase IRX10L OS=Gossypium arboreum GN=F383_27204 PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 2.500e-48
Identity = 113/175 (64.57%), Postives = 129/175 (73.71%), Query Frame = 1 

		  

Query: 4   TVQLQQQAATTAATASKSWSIPSALVPPAGTSIGLRRAADRFALRSSFSSSSL------- 63
           T Q+  QA T +   S S   P A  P AG    LR  +DRFAL+SSF S SL       
Sbjct: 408 TTQMALQAPTISIKPSNS---PLAPTPNAG----LRPPSDRFALKSSFFSPSLHLLLPSP 467

Query: 64  --RLPSVNVTAAPKFSMRVASKQAYICRDCGYIYNDPRKPFEKLPDNFFCAVCGAPKRRF 123
             RLP+   + APKFSMRVASKQAYICRDCGYIYN+ R PFEK+ D++FC VCGAPKRRF
Sbjct: 468 HQRLPTNTASPAPKFSMRVASKQAYICRDCGYIYNE-RTPFEKVSDSYFCPVCGAPKRRF 527

Query: 124 RPYDPPVTKNVNDKNVRKARKEQIKQDEAIGKALPIAIVVGIAILGGVYFYLNST 170
           +PY P VTKN ND +VRKARKEQIK+DEA+GKALPIAIVVGIA+L G+YFYLNST
Sbjct: 528 KPYQPAVTKNANDTDVRKARKEQIKRDEAVGKALPIAIVVGIAVLAGLYFYLNST 574
[Close]
BLAST of Spo05684.1 vs. TAIR (Arabidopsis)
Match: AT5G51010.1 (Rubredoxin-like superfamily protein)

HSP 1 Score: 165.6 bits (418), Expect = 2.600e-41
Identity = 84/127 (66.14%), Postives = 103/127 (81.10%), Query Frame = 1 

		  

Query: 48  RSSFSSS-SLRL----PSVNVTAAPKFSMRVASKQAYICRDCGYIYNDPRKPFEKLPDNF 107
           RSSF    S+RL     S++ ++AP+FSMRV+SKQAYICRDCGYIYND R PF+KLPDN+
Sbjct: 28  RSSFLPYYSMRLLGNKKSLSKSSAPRFSMRVSSKQAYICRDCGYIYND-RTPFDKLPDNY 87

Query: 108 FCAVCGAPKRRFRPYDPPVTKNVNDKNVRKARKEQIKQDEAIGKALPIAIVVGIAILGGV 167
           FC VC APKRRFR Y P V+KNVNDK+VRKARK ++++DEA+GKALPI I VG+  L  +
Sbjct: 88  FCPVCAAPKRRFRAYMPDVSKNVNDKDVRKARKAELQRDEAVGKALPIGIAVGVLALAAL 147

Query: 168 YFYLNST 170
           YFY+NST
Sbjct: 148 YFYVNST 153
[Close]
BLAST of Spo05684.1 vs. TAIR (Arabidopsis)
Match: AT5G17170.1 (rubredoxin family protein)

HSP 1 Score: 54.7 bits (130), Expect = 6.500e-8
Identity = 36/104 (34.62%), Postives = 52/104 (50.00%), Query Frame = 1 

		  

Query: 65  AAPKFSMRVA----SKQAYICRDCGYIYNDPRKPFEKLPDNFFCAVCGAPKRRFRPYDPP 124
           A P+F  ++     ++  +IC DCG+IY  P K F++ PD + C  C APK+RF  YD  
Sbjct: 179 APPRFGRKLTETQKARATHICLDCGFIYTLP-KSFDEQPDTYVCPQCIAPKKRFAKYD-- 238

Query: 125 VTKNVNDKNVRKARKEQIKQDEAIGKAL-PIAIVVG-IAILGGV 163
                            +   +AIG  L PI ++VG +A LG V
Sbjct: 239 -----------------VNTGKAIGGGLPPIGVIVGLLAGLGAV 262
The following BLAST results are available for this feature:
BLAST of Spo05684.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902186000|gb|KNA10600.1|1.0e-87100.hypothetical protein SOVF_1429... [more]
gi|731374626|ref|XP_010667019.1|1.7e-7485.8PREDICTED: uncharacterized pro... [more]
gi|567888904|ref|XP_006436974.1|2.5e-4965.4hypothetical protein CICLE_v10... [more]
gi|641838699|gb|KDO57638.1|3.2e-4965.0hypothetical protein CISIN_1g0... [more]
gi|224134208|ref|XP_002321763.1|3.6e-4861.5rubredoxin family protein [Pop... [more]
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BLAST of Spo05684.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QTP2_SPIOL7.1e-88100.Uncharacterized protein OS=Spi... [more]
A0A0J8B6V5_BETVU1.2e-7485.8Uncharacterized protein OS=Bet... [more]
V4VCY7_9ROSI1.7e-4965.4Uncharacterized protein OS=Cit... [more]
A0A067ER95_CITSI2.2e-4965.0Uncharacterized protein OS=Cit... [more]
A0A0B0MS74_GOSAR2.5e-4864.5Putative beta-1,4-xylosyltrans... [more]
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BLAST of Spo05684.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo05684.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2
Match NameE-valueIdentityDescription
AT5G51010.12.6e-4166.1Rubredoxin-like superfamily pr... [more]
AT5G17170.16.5e-834.6rubredoxin family protein[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004039Rubredoxin-type foldGENE3D2.20.28.10coord: 75..118
score: 3.8
IPR024934Rubredoxin-like domainPROFILEPS50903RUBREDOXIN_LIKEcoord: 76..117
score: 11
NoneNo IPR availablePANTHERPTHR17130MITOCHONDRIAL OUTER MEMBRANE PROTEIN 25coord: 28..170
score: 3.5
NoneNo IPR availablePANTHERPTHR17130:SF25SUBFAMILY NOT NAMEDcoord: 28..170
score: 3.5
NoneNo IPR availableunknownSSF57802Rubredoxin-likecoord: 76..121
score: 1.57

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009644 response to high light intensity
biological_process GO:0009816 defense response to bacterium, incompatible interaction
biological_process GO:0006139 nucleobase-containing compound metabolic process
biological_process GO:0006796 phosphate-containing compound metabolic process
biological_process GO:0019684 photosynthesis, light reaction
biological_process GO:0009657 plastid organization
biological_process GO:0042128 nitrate assimilation
biological_process GO:0070838 divalent metal ion transport
biological_process GO:0006457 protein folding
biological_process GO:0009987 cellular process
biological_process GO:0046685 response to arsenic-containing substance
biological_process GO:0009408 response to heat
biological_process GO:0030003 cellular cation homeostasis
biological_process GO:0042542 response to hydrogen peroxide
biological_process GO:0034976 response to endoplasmic reticulum stress
biological_process GO:0006984 ER-nucleus signaling pathway
biological_process GO:0009811 stilbene biosynthetic process
biological_process GO:0008152 metabolic process
biological_process GO:0044260 cellular macromolecule metabolic process
biological_process GO:0009809 lignin biosynthetic process
biological_process GO:0044085 cellular component biogenesis
biological_process GO:0009658 chloroplast organization
biological_process GO:0010264 myo-inositol hexakisphosphate biosynthetic process
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0009639 response to red or far red light
biological_process GO:0050789 regulation of biological process
biological_process GO:0007275 multicellular organism development
biological_process GO:0009308 amine metabolic process
biological_process GO:0006810 transport
biological_process GO:0019852 L-ascorbic acid metabolic process
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0006979 response to oxidative stress
biological_process GO:0009611 response to wounding
biological_process GO:0009753 response to jasmonic acid
biological_process GO:0006857 oligopeptide transport
biological_process GO:0009805 coumarin biosynthetic process
cellular_component GO:0031410 cytoplasmic vesicle
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005783 endoplasmic reticulum
cellular_component GO:0009507 chloroplast
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005829 cytosol
cellular_component GO:0005618 cell wall
cellular_component GO:0005634 nucleus
cellular_component GO:0009295 nucleoid
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0000785 chromatin
cellular_component GO:0005622 intracellular
molecular_function GO:0051082 unfolded protein binding
molecular_function GO:0003677 DNA binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0048038 quinone binding
molecular_function GO:0008131 primary amine oxidase activity
molecular_function GO:0005507 copper ion binding
molecular_function GO:0015293 symporter activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0016746 transferase activity, transferring acyl groups
molecular_function GO:0005215 transporter activity
molecular_function GO:0016207 4-coumarate-CoA ligase activity
molecular_function GO:0020037 heme binding
molecular_function GO:0016688 L-ascorbate peroxidase activity
molecular_function GO:0003682 chromatin binding
molecular_function GO:0005506 iron ion binding
molecular_function GO:0005515 protein binding
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo217110.79Barchart | Table
Spo044240.78Barchart | Table
Spo020440.75Barchart | Table
Spo198610.75Barchart | Table
Spo280820.75Barchart | Table
Spo143460.75Barchart | Table
Spo141540.74Barchart | Table
Spo075790.74Barchart | Table
Spo232250.74Barchart | Table
Spo202230.74Barchart | Table
Spo121470.73Barchart | Table
Spo027750.73Barchart | Table
Spo230780.73Barchart | Table
Spo032020.73Barchart | Table
Spo150320.72Barchart | Table
Spo258640.72Barchart | Table
Spo103520.71Barchart | Table
Spo011160.71Barchart | Table
Spo086350.71Barchart | Table
Spo106770.71Barchart | Table
Spo112700.71Barchart | Table
Spo211910.71Barchart | Table
Spo086680.70Barchart | Table
Spo194610.70Barchart | Table
Spo225450.70Barchart | Table
Spo011170.70Barchart | Table
Spo092880.70Barchart | Table
Spo254390.70Barchart | Table
Spo222770.70Barchart | Table
Spo171570.70Barchart | Table
Spo058980.69Barchart | Table
Spo122680.69Barchart | Table
Spo123830.69Barchart | Table
Spo244900.69Barchart | Table
Spo132210.69Barchart | Table
Spo038990.69Barchart | Table
Spo219770.69Barchart | Table
Spo212960.69Barchart | Table
Spo069110.69Barchart | Table
Spo069750.68Barchart | Table
Spo040940.68Barchart | Table
Spo191760.68Barchart | Table
Spo280910.68Barchart | Table
Spo269810.68Barchart | Table
Spo089470.68Barchart | Table
Spo123820.68Barchart | Table
Spo133330.68Barchart | Table
Spo106120.68Barchart | Table
Spo123860.67Barchart | Table
Spo280010.67Barchart | Table
Spo108300.67Barchart | Table
Spo008020.67Barchart | Table
Spo116420.67Barchart | Table
Spo056350.67Barchart | Table
Spo141330.67Barchart | Table
Spo055480.67Barchart | Table
Spo033490.67Barchart | Table
Spo030720.67Barchart | Table
Spo016930.67Barchart | Table
Spo043820.66Barchart | Table
Spo137930.66Barchart | Table
Spo130300.66Barchart | Table
Spo123850.66Barchart | Table
Spo265570.66Barchart | Table
Spo066620.66Barchart | Table
Spo194870.66Barchart | Table
Spo001160.66Barchart | Table
Spo020170.66Barchart | Table
Spo236800.66Barchart | Table
Spo084670.65Barchart | Table
Spo116530.65Barchart | Table
Spo101460.65Barchart | Table
Spo113970.65Barchart | Table
Spo112860.65Barchart | Table