Spo05651 (gene) | SpinachBase

Overview


Name	Spo05651
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	rRNA processing protein
Location	SpoScf_01038 : 211832 .. 215196 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTGAGTTGACACGTAAAATCCAGCGAATTAGGGTTTATCGTCCTTGAAAAAATTGGGCATTTCAACAAAACTCTTCCTTTTCTGTCTGTCAAATTCCTTTAATTCCGACAATGAAGAACACTAAACCAAACACCGAATCCATCAACATGAACAACAACAACTACAACAATAAGAATAAGATGAAGAAAAACATGCAGAGATTGGGCGGCACAGGCCTTTCTCTTGAAGCCTTTGCCAATGCCAAATCCAGACAAAACTCCTACAATCCTGCTTTGCTAAGTATGTTATCCTCTCTCTTCGTTCCAAAATGCAGTCTTCTTTGATTTTTTTTTTTTTTTTGTTTTTTTATTTTATTTTGGAATATGGGTATTGTTTAATTGCTCGAATTTCGGGGGGTTTTTTTAAAAAAAATTCTGGGTGTTAATCGTTCTTGGTTTTGATGACATGATTGTTGATTGTGGGATATTTTGTTTCGCAGTGTTGTGATTATTGGACTAATTTTTATTGGTTGTTTGTGCGTTTGTATTTGTCATATTGATTTTTGAATGAAGATTGTCAATTTACTGGGAAATTTGTTCAGTGTTGGGTAGAAGGAACTGGATTAAATTACACACTAGAGGTTCTTTCATCACTCTTGTTGATACTGAAGTAGCTGTTGGTTGGATATAAAGGGTTCATTTAGCAAAGAGCGTCAGTTTATTAGTTTGTTATCCTATGTAGGTGCATCTTAGGATTCTAGGGCATTATTTTTCAGCTTACTGTAGAAGTGTAATTTATGGTGAAGTAGATCGACCAAGGCAGCTCTGGCGCAAAGTACAAACCTTATAAGTCTAGCGCAAAGTACAAACCTTATAAGGATCCCAAATCACCAATTGTCAATATAGGTCGGTTCACAGGCTTCGGCAGCATGTGATTCACTATTAGGAAATTGTAATTTAATGAACTTTGACATAGGACAGGTGATACATACCTTCATTTGGTCAGTAATATTAGGTTTAAGTGTAACAGATATATAGCAGAGATGGGAAGCAGTTTAGTGAGCTCTTCTAATTGTTGTTTGTAAAATCCATATTTTGTTAGATGAGATTGGTTGTTTGAGGTCAAGTATGAGTCCAATTATCAACTATTCTACTTAGTTAGAAACCTGTGCAGTCTTTTCAGTTTTTATTTAATAGTCTAACAGAACCGGAATTCCAATTTGAAGAACCTCTAACAGTTTGTTTTAATGACCATGTAAAAACGATGACGCAACTTACCTGCAGTGAGTCACAGATTATGTCTTAGACAGCAGTCTCAGTTAAATTTATGTATATAAGGCGTATATGAGATTGTCATCATCAAATATGTAGCATCAAAATTTCCTAACTGCATGTGTTAATCCCGCCTTTTAAGTCATCTACCTTACTAATTCAGGTTTTAAATATTATGTAGTTTAATATTTGGATTTCTATTAGGTGAAATTTTTATCATACCATTGCTGTTTCTCTAAGACTTGGACTAACAGGTTAAGTGGTTTGTGTGGACTTGTTTTCCCGCTGCCAAGAACTTTCATTTATGTTCAATAGGTTCTTTAGTGTGTGTGCGTGTGTGTGTGTGGTGGGGNGGGGGGGGGGGGGGGGGGGGTTGATGCGTTACTGCATTTCATAACCTGTGGATAGCAAGCACATTCGCTGAGTGTGTCTGCTGATTGAGGAACTTTGCTGTTTTCCAATCAGCTCAATACCTCCACCCAGATTAAATTGTAGAAAGCTTCTCCTGGTTTACTGGAGATAATGCGAGTGAAATATTGTGATTTATTGGTCTCTAGTGGTATTTCTTTATCTAGGGAGTGCGAAAATGGAGTGACAGCAAGGCATGAATGGCGGTGAATTGATGGCGAGTGGTTCGTTTAGGTGGTGTAGGTATGTCATGTTGCATTGAGACTTGAGAGGGTTAGAGTTACAAAAAGGAAATGCACTTAAAGACAATAACAAAATTTTCATTTAATCTACATTTATTTTTGAAATTGCAGTTGCTTATTGCATATCATGAAAAACAAACAATTTCGGATTGTAAAGTTTTGCATGTTTATGGCTGAGGAACAAACGTTTAATCTGTTAGGGAAAGTTTGCGGACAAGTTTACTCAGACTTGCCTATTAGTACAAGTGCTAGACTGGCATTTTTTGGTCCACGGTGAAGGGTCAAGTATTCGTACTTCATAACCCATCTCGTAGTGCTGAGTATCTAAGTAATGTAATACTACGTACGACACTCGAGTTGGGATGAAGAGTTTCTGTAACATAGGATGTTTTAATGGAACTTCTTGATTTGGTATCTTTGACCCTCCAATAAGATGAGATCATTTCGTTTTAATTTCACGTTCAATATTGACCATGTGAGAAATTTAGGAGCTGTTTGTTGGAATGTTGAGTGAAAAGAGCCTGTGTCTTTACCTTTTATTAATTTATGTTGGTGTTGCAATAATATGTTAGTTAAAACTTATCTGGGTTTTGATTTTTGCTGTAATGGTGATATACTGACATGATATATTTACATCTTTCCATCATTTTAGAGAAAAAGAGAGAATTTTACAGGAATGCTAAACATGTAAACAAATACAAAAAACTGCTGAAGCAACAAAATCAACCAAATGATCAATCCATATCTGTCGAACCTGATGAGGTATTGTACTCCTTTTTGTTATCTTAAATGAAAGCTCGGCGTGAGTGTAACATTCAATGTTGGGTGGTTGTAGGTGAATGAATCTAGGGTTACCGGTGAGACAAGTAAGGAAGACAAGAAAAGCAGAAAAGGATCATACAGTTTGCAAGACTTGTATGTGAAGAAACACGAAGAACAAGAGAAAGCAAGGATGGAAAGAGATTCCTTTTTCAAAGCAAGGAAGGAAGAAAAGGATAAGGCTGAATCCCGCAGAAAAGATTTACGGGAAAAGATGTTTAAAAGAACACGGAAAGGTCAGCCAGTCATGAAATATAGAATTGAGCAAATTTTGGAGACATTACAGGGTTCTACTTCTACTTCTACATCGTAGTTGTCTGCTTCTTTCTGGGTCGAACTTCTAACTGCAAGAATCTGAATGACGATCAGCTCTTCGCTTATTTGATGATAAAAATTAAGTCATTTTAAGTTGAATCCGTCTGTAACAGTTGAGGTGTGAATCATTTGATGCTCTGGTTGTAGTTAGATCCTGTAAAATTTTGCTCTATAATGCATAGCAGAATACACAATTTTGGACCAAATCTCAACTTTAGATGCTTGTTTCCAAATGTAAGAGAAAAAAAAGTTTTGTTTATCATCGTTCTAAACTAACAAGCATTCCATATGAAATTCGAAGAAATAAAGATGTGCTTGCTGAATGCTCAC

mRNA sequence

GTTGAGTTGACACGTAAAATCCAGCGAATTAGGGTTTATCGTCCTTGAAAAAATTGGGCATTTCAACAAAACTCTTCCTTTTCTGTCTGTCAAATTCCTTTAATTCCGACAATGAAGAACACTAAACCAAACACCGAATCCATCAACATGAACAACAACAACTACAACAATAAGAATAAGATGAAGAAAAACATGCAGAGATTGGGCGGCACAGGCCTTTCTCTTGAAGCCTTTGCCAATGCCAAATCCAGACAAAACTCCTACAATCCTGCTTTGCTAAAGAAAAAGAGAGAATTTTACAGGAATGCTAAACATGTAAACAAATACAAAAAACTGCTGAAGCAACAAAATCAACCAAATGATCAATCCATATCTGTCGAACCTGATGAGGTGAATGAATCTAGGGTTACCGGTGAGACAAGTAAGGAAGACAAGAAAAGCAGAAAAGGATCATACAGTTTGCAAGACTTGTATGTGAAGAAACACGAAGAACAAGAGAAAGCAAGGATGGAAAGAGATTCCTTTTTCAAAGCAAGGAAGGAAGAAAAGGATAAGGCTGAATCCCGCAGAAAAGATTTACGGGAAAAGATGTTTAAAAGAACACGGAAAGGTCAGCCAGTCATGAAATATAGAATTGAGCAAATTTTGGAGACATTACAGGGTTCTACTTCTACTTCTACATCGTAGTTGTCTGCTTCTTTCTGGGTCGAACTTCTAACTGCAAGAATCTGAATGACGATCAGCTCTTCGCTTATTTGATGATAAAAATTAAGTCATTTTAAGTTGAATCCGTCTGTAACAGTTGAGGTGTGAATCATTTGATGCTCTGGTTGTAGTTAGATCCTGTAAAATTTTGCTCTATAATGCATAGCAGAATACACAATTTTGGACCAAATCTCAACTTTAGATGCTTGTTTCCAAATGTAAGAGAAAAAAAAGTTTTGTTTATCATCGTTCTAAACTAACAAGCATTCCATATGAAATTCGAAGAAATAAAGATGTGCTTGCTGAATGCTCAC

Coding sequence (CDS)

ATGAAGAACACTAAACCAAACACCGAATCCATCAACATGAACAACAACAACTACAACAATAAGAATAAGATGAAGAAAAACATGCAGAGATTGGGCGGCACAGGCCTTTCTCTTGAAGCCTTTGCCAATGCCAAATCCAGACAAAACTCCTACAATCCTGCTTTGCTAAAGAAAAAGAGAGAATTTTACAGGAATGCTAAACATGTAAACAAATACAAAAAACTGCTGAAGCAACAAAATCAACCAAATGATCAATCCATATCTGTCGAACCTGATGAGGTGAATGAATCTAGGGTTACCGGTGAGACAAGTAAGGAAGACAAGAAAAGCAGAAAAGGATCATACAGTTTGCAAGACTTGTATGTGAAGAAACACGAAGAACAAGAGAAAGCAAGGATGGAAAGAGATTCCTTTTTCAAAGCAAGGAAGGAAGAAAAGGATAAGGCTGAATCCCGCAGAAAAGATTTACGGGAAAAGATGTTTAAAAGAACACGGAAAGGTCAGCCAGTCATGAAATATAGAATTGAGCAAATTTTGGAGACATTACAGGGTTCTACTTCTACTTCTACATCGTAG

Protein sequence

MKNTKPNTESINMNNNNYNNKNKMKKNMQRLGGTGLSLEAFANAKSRQNSYNPALLKKKREFYRNAKHVNKYKKLLKQQNQPNDQSISVEPDEVNESRVTGETSKEDKKSRKGSYSLQDLYVKKHEEQEKARMERDSFFKARKEEKDKAESRRKDLREKMFKRTRKGQPVMKYRIEQILETLQGSTSTSTS

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo05651.1	Spo05651.1	mRNA

Homology

[Close]

BLAST of Spo05651.1 vs. NCBI nr
Match: gi|902169571|gb|KNA07675.1| (hypothetical protein SOVF_169700 [Spinacia oleracea])

HSP 1 Score: 323.9 bits (829), Expect = 1.800e-85
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 1


		  
Query: 13  MNNNNYNNKNKMKKNMQRLGGTGLSLEAFANAKSRQNSYNPALLKKKREFYRNAKHVNKY 72
           MNNNNYNNKNKMKKNMQRLGGTGLSLEAFANAKSRQNSYNPALLKKKREFYRNAKHVNKY
Sbjct: 1   MNNNNYNNKNKMKKNMQRLGGTGLSLEAFANAKSRQNSYNPALLKKKREFYRNAKHVNKY 60

Query: 73  KKLLKQQNQPNDQSISVEPDEVNESRVTGETSKEDKKSRKGSYSLQDLYVKKHEEQEKAR 132
           KKLLKQQNQPNDQSISVEPDEVNESRVTGETSKEDKKSRKGSYSLQDLYVKKHEEQEKAR
Sbjct: 61  KKLLKQQNQPNDQSISVEPDEVNESRVTGETSKEDKKSRKGSYSLQDLYVKKHEEQEKAR 120

Query: 133 MERDSFFKARKEEKDKAESRRKDLREKMFKRTRKGQPVMKYRIEQILETLQGSTSTSTS 192
           MERDSFFKARKEEKDKAESRRKDLREKMFKRTRKGQPVMKYRIEQILETLQGSTSTSTS
Sbjct: 121 MERDSFFKARKEEKDKAESRRKDLREKMFKRTRKGQPVMKYRIEQILETLQGSTSTSTS 179

[Close]

BLAST of Spo05651.1 vs. NCBI nr
Match: gi|731369013|ref|XP_010696417.1| (PREDICTED: rRNA-processing protein FYV7 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 231.9 bits (590), Expect = 9.500e-58
Identity = 132/169 (78.11%), Postives = 148/169 (87.57%), Query Frame = 1


		  
Query: 19  NNKNKMKKNMQRLGGTGLSLEAFANAKSRQNSYNPALLKKKREFYRNAKHVNKYKKLLKQ 78
           NNK K  KNMQRLGG GLSLEAFANAKSR N+YNPALLKKKREFY+NAKHVNKYKKLLKQ
Sbjct: 23  NNKKKKMKNMQRLGGAGLSLEAFANAKSRNNAYNPALLKKKREFYKNAKHVNKYKKLLKQ 82

Query: 79  QNQPNDQSISVEPDEVNESRVTGETSKEDKKSRKGSYSLQDLYVKKHEEQEKARMERDSF 138
           Q+QPNDQ  SVEP E+         SKE+KK+RKGSYSL+DLYVKKHEEQEKARMER++ 
Sbjct: 83  QSQPNDQD-SVEPAEI---------SKENKKNRKGSYSLRDLYVKKHEEQEKARMEREAN 142

Query: 139 FKARKEEKDKAESRRKDLREKMFKRTRKGQPVMKYRIEQILETLQGSTS 188
           +KA+KEEK++AESRRKDLREKMFKRTR+GQPVMKYRIE +LET+QG  S
Sbjct: 143 YKAKKEEKERAESRRKDLREKMFKRTRRGQPVMKYRIEHLLETIQGLAS 181

[Close]

BLAST of Spo05651.1 vs. NCBI nr
Match: gi|920696281|gb|KOM39506.1| (hypothetical protein LR48_Vigan03g288800 [Vigna angularis])

HSP 1 Score: 180.3 bits (456), Expect = 3.300e-42
Identity = 102/174 (58.62%), Postives = 142/174 (81.61%), Query Frame = 1


		  
Query: 14  NNNNYNNKNKMKKNMQRLGGTGLSLEAFANAKSRQNSYNPALLKKKREFYRNAKHVNKYK 73
           +++N   K+ MK+N+ RLGG+GLSLEAFANAKS+   YNPA++KK+REFY+NAK+VNK+K
Sbjct: 7   HSDNRKKKHMMKRNISRLGGSGLSLEAFANAKSKNKQYNPAIIKKQREFYKNAKNVNKFK 66

Query: 74  KLLKQQNQPNDQSISVEPD-EVNESRVTGETSKEDKKSRKGSYSLQDLYVKKHEEQEKAR 133
           KLLKQQNQ ND+S+  + D +VNE   T +   E ++ +  ++SL++LY K+HEE+EK R
Sbjct: 67  KLLKQQNQQNDRSLGQKHDKDVNE---TDKDKSERRRRKNSAFSLEELYRKQHEEKEKER 126

Query: 134 MERDSFFKARKEEKDKAESRRKDLREKMFKRTRKGQPVMKYRIEQILETLQGST 187
           MER++  + RKEE+++AE+RRK +REKM K+TR+GQPVMKYRIE +LET+QGST
Sbjct: 127 MEREAVLRVRKEEREQAETRRKAVREKMLKKTRRGQPVMKYRIEHLLETIQGST 177

[Close]

BLAST of Spo05651.1 vs. NCBI nr
Match: gi|225436791|ref|XP_002268903.1| (PREDICTED: rRNA-processing protein FYV7 [Vitis vinifera])

HSP 1 Score: 179.9 bits (455), Expect = 4.300e-42
Identity = 106/180 (58.89%), Postives = 143/180 (79.44%), Query Frame = 1


		  
Query: 11  INMNNNNYNNKNKM--KKNMQRLGGTGLSLEAFANAKSRQNSYNPALLKKKREFYRNAKH 70
           IN + +   +K  M  KKNM+RLGG GLSLEAFANAKS  N+YNPAL+KK++EFY+NAK+
Sbjct: 17  INGSKSIKKHKEMMMKKKNMRRLGGGGLSLEAFANAKSTTNNYNPALIKKQKEFYKNAKY 76

Query: 71  VNKYKKLLKQQNQPNDQSISV-EPDEVNESRVTGETSKEDKKSRKGSYSLQDLYVKKHEE 130
           V+KYKK LKQQ + ND S ++ +P + NE     + SK++KK +  S+SL++LY KK EE
Sbjct: 77  VSKYKKSLKQQGKQNDISSAIRQPQDENEGEGVSQRSKKNKKKKDSSHSLKELYEKKREE 136

Query: 131 QEKARMERDSFFKARKEEKDKAESRRKDLREKMFKRTRKGQPVMKYRIEQILETLQGSTS 188
           +E+ R+ERD+ F+A+KE++++ ES+RK  REKMFKRTRKGQPVMKYRIE +L+T+QGSTS
Sbjct: 137 EERTRIERDAIFQAKKEKRERVESQRKAAREKMFKRTRKGQPVMKYRIEHLLQTIQGSTS 196

[Close]

BLAST of Spo05651.1 vs. NCBI nr
Match: gi|965671743|dbj|BAT86350.1| (hypothetical protein VIGAN_04399000 [Vigna angularis var. angularis])

HSP 1 Score: 179.1 bits (453), Expect = 7.300e-42
Identity = 102/174 (58.62%), Postives = 141/174 (81.03%), Query Frame = 1


		  
Query: 14  NNNNYNNKNKMKKNMQRLGGTGLSLEAFANAKSRQNSYNPALLKKKREFYRNAKHVNKYK 73
           +++N   K+ MK+N+ RLGG+GLSLEAFANAKS+   YNPA++KK+REFY+NAK+VNK+K
Sbjct: 7   HSDNRKKKHMMKRNISRLGGSGLSLEAFANAKSKNKQYNPAIIKKQREFYKNAKNVNKFK 66

Query: 74  KLLKQQNQPNDQSISVEPD-EVNESRVTGETSKEDKKSRKGSYSLQDLYVKKHEEQEKAR 133
           KLLKQQNQ ND+S+  + D +VNE   T +   E  + +  ++SL++LY K+HEE+EK R
Sbjct: 67  KLLKQQNQQNDRSLGQKHDKDVNE---TDKDKSERTRRKNSAFSLEELYRKQHEEKEKER 126

Query: 134 MERDSFFKARKEEKDKAESRRKDLREKMFKRTRKGQPVMKYRIEQILETLQGST 187
           MER++  + RKEE+++AE+RRK +REKM K+TR+GQPVMKYRIE +LET+QGST
Sbjct: 127 MEREAVLRVRKEEREQAETRRKAVREKMLKKTRRGQPVMKYRIEHLLETIQGST 177

[Close]

BLAST of Spo05651.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QK98_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_169700 PE=4 SV=1)

HSP 1 Score: 323.9 bits (829), Expect = 1.300e-85
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 1


		  
Query: 13  MNNNNYNNKNKMKKNMQRLGGTGLSLEAFANAKSRQNSYNPALLKKKREFYRNAKHVNKY 72
           MNNNNYNNKNKMKKNMQRLGGTGLSLEAFANAKSRQNSYNPALLKKKREFYRNAKHVNKY
Sbjct: 1   MNNNNYNNKNKMKKNMQRLGGTGLSLEAFANAKSRQNSYNPALLKKKREFYRNAKHVNKY 60

Query: 73  KKLLKQQNQPNDQSISVEPDEVNESRVTGETSKEDKKSRKGSYSLQDLYVKKHEEQEKAR 132
           KKLLKQQNQPNDQSISVEPDEVNESRVTGETSKEDKKSRKGSYSLQDLYVKKHEEQEKAR
Sbjct: 61  KKLLKQQNQPNDQSISVEPDEVNESRVTGETSKEDKKSRKGSYSLQDLYVKKHEEQEKAR 120

Query: 133 MERDSFFKARKEEKDKAESRRKDLREKMFKRTRKGQPVMKYRIEQILETLQGSTSTSTS 192
           MERDSFFKARKEEKDKAESRRKDLREKMFKRTRKGQPVMKYRIEQILETLQGSTSTSTS
Sbjct: 121 MERDSFFKARKEEKDKAESRRKDLREKMFKRTRKGQPVMKYRIEQILETLQGSTSTSTS 179

[Close]

BLAST of Spo05651.1 vs. UniProtKB/TrEMBL
Match: A0A0J8E1H5_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g180030 PE=4 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 6.600e-58
Identity = 132/169 (78.11%), Postives = 148/169 (87.57%), Query Frame = 1


		  
Query: 19  NNKNKMKKNMQRLGGTGLSLEAFANAKSRQNSYNPALLKKKREFYRNAKHVNKYKKLLKQ 78
           NNK K  KNMQRLGG GLSLEAFANAKSR N+YNPALLKKKREFY+NAKHVNKYKKLLKQ
Sbjct: 23  NNKKKKMKNMQRLGGAGLSLEAFANAKSRNNAYNPALLKKKREFYKNAKHVNKYKKLLKQ 82

Query: 79  QNQPNDQSISVEPDEVNESRVTGETSKEDKKSRKGSYSLQDLYVKKHEEQEKARMERDSF 138
           Q+QPNDQ  SVEP E+         SKE+KK+RKGSYSL+DLYVKKHEEQEKARMER++ 
Sbjct: 83  QSQPNDQD-SVEPAEI---------SKENKKNRKGSYSLRDLYVKKHEEQEKARMEREAN 142

Query: 139 FKARKEEKDKAESRRKDLREKMFKRTRKGQPVMKYRIEQILETLQGSTS 188
           +KA+KEEK++AESRRKDLREKMFKRTR+GQPVMKYRIE +LET+QG  S
Sbjct: 143 YKAKKEEKERAESRRKDLREKMFKRTRRGQPVMKYRIEHLLETIQGLAS 181

[Close]

BLAST of Spo05651.1 vs. UniProtKB/TrEMBL
Match: A0A0L9UA04_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan03g288800 PE=4 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 2.300e-42
Identity = 102/174 (58.62%), Postives = 142/174 (81.61%), Query Frame = 1


		  
Query: 14  NNNNYNNKNKMKKNMQRLGGTGLSLEAFANAKSRQNSYNPALLKKKREFYRNAKHVNKYK 73
           +++N   K+ MK+N+ RLGG+GLSLEAFANAKS+   YNPA++KK+REFY+NAK+VNK+K
Sbjct: 7   HSDNRKKKHMMKRNISRLGGSGLSLEAFANAKSKNKQYNPAIIKKQREFYKNAKNVNKFK 66

Query: 74  KLLKQQNQPNDQSISVEPD-EVNESRVTGETSKEDKKSRKGSYSLQDLYVKKHEEQEKAR 133
           KLLKQQNQ ND+S+  + D +VNE   T +   E ++ +  ++SL++LY K+HEE+EK R
Sbjct: 67  KLLKQQNQQNDRSLGQKHDKDVNE---TDKDKSERRRRKNSAFSLEELYRKQHEEKEKER 126

Query: 134 MERDSFFKARKEEKDKAESRRKDLREKMFKRTRKGQPVMKYRIEQILETLQGST 187
           MER++  + RKEE+++AE+RRK +REKM K+TR+GQPVMKYRIE +LET+QGST
Sbjct: 127 MEREAVLRVRKEEREQAETRRKAVREKMLKKTRRGQPVMKYRIEHLLETIQGST 177

[Close]

BLAST of Spo05651.1 vs. UniProtKB/TrEMBL
Match: A0A0S3S0I4_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.04G399000 PE=4 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 5.100e-42
Identity = 102/174 (58.62%), Postives = 141/174 (81.03%), Query Frame = 1


		  
Query: 14  NNNNYNNKNKMKKNMQRLGGTGLSLEAFANAKSRQNSYNPALLKKKREFYRNAKHVNKYK 73
           +++N   K+ MK+N+ RLGG+GLSLEAFANAKS+   YNPA++KK+REFY+NAK+VNK+K
Sbjct: 7   HSDNRKKKHMMKRNISRLGGSGLSLEAFANAKSKNKQYNPAIIKKQREFYKNAKNVNKFK 66

Query: 74  KLLKQQNQPNDQSISVEPD-EVNESRVTGETSKEDKKSRKGSYSLQDLYVKKHEEQEKAR 133
           KLLKQQNQ ND+S+  + D +VNE   T +   E  + +  ++SL++LY K+HEE+EK R
Sbjct: 67  KLLKQQNQQNDRSLGQKHDKDVNE---TDKDKSERTRRKNSAFSLEELYRKQHEEKEKER 126

Query: 134 MERDSFFKARKEEKDKAESRRKDLREKMFKRTRKGQPVMKYRIEQILETLQGST 187
           MER++  + RKEE+++AE+RRK +REKM K+TR+GQPVMKYRIE +LET+QGST
Sbjct: 127 MEREAVLRVRKEEREQAETRRKAVREKMLKKTRRGQPVMKYRIEHLLETIQGST 177

[Close]

BLAST of Spo05651.1 vs. UniProtKB/TrEMBL
Match: F6HQ16_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0104g01330 PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 6.600e-42
Identity = 105/180 (58.33%), Postives = 143/180 (79.44%), Query Frame = 1


		  
Query: 11  INMNNNNYNNKNKM--KKNMQRLGGTGLSLEAFANAKSRQNSYNPALLKKKREFYRNAKH 70
           IN + +   +K  M  KKNM+RLGG GLSLEAFANAKS  N+YNPAL+KK++EFY+NAK+
Sbjct: 17  INGSKSIKKHKEMMMKKKNMRRLGGGGLSLEAFANAKSTTNNYNPALIKKQKEFYKNAKY 76

Query: 71  VNKYKKLLKQQNQPNDQSISV-EPDEVNESRVTGETSKEDKKSRKGSYSLQDLYVKKHEE 130
           V+KYKK LKQQ + ND S ++ +P + NE     + SK++KK +  S+SL++LY KK EE
Sbjct: 77  VSKYKKSLKQQGKQNDISSAIRQPQDENEGEGVSQRSKKNKKKKDSSHSLKELYEKKREE 136

Query: 131 QEKARMERDSFFKARKEEKDKAESRRKDLREKMFKRTRKGQPVMKYRIEQILETLQGSTS 188
           +E+ R+ERD+ F+A+KE++++ ES+RK  REKMFKRTRKGQPVMKYRIE +L+T+QGST+
Sbjct: 137 EERTRIERDAIFQAKKEKRERVESQRKAAREKMFKRTRKGQPVMKYRIEHLLQTIQGSTT 196

[Close]

BLAST of Spo05651.1 vs. TAIR (Arabidopsis)
Match: AT4G03180.1 (rRNA processing (InterPro:IPR013730))

HSP 1 Score: 141.0 bits (354), Expect = 7.800e-34
Identity = 82/167 (49.10%), Postives = 120/167 (71.86%), Query Frame = 1


		  
Query: 21  KNKMKKNMQRLGGTGLSLEAFANAKSRQNSYNPALLKKKREFYRNAKHVNKYKKLLKQQN 80
           + K +KNM+RLGG GLSL+ FAN KS  N YNP+L+KK++EFY+NAK+V+K++K LKQQN
Sbjct: 19  ETKKRKNMRRLGGGGLSLQTFANMKSENNRYNPSLIKKQKEFYKNAKYVSKFRKSLKQQN 78

Query: 81  QPNDQSISVEPDEVNESRVTGETSKEDKKSRKGS--YSLQDLYVKKHEEQEKARMERDSF 140
            P       + +E  E+   G+   +DK+  K +    ++DLY +  EE E+ R ER++ 
Sbjct: 79  IP-------DKNETGETSKVGDDDDDDKRKGKSNKRIGVEDLYKQTREEMERVRKEREAM 138

Query: 141 FKARKEEKDKAESRRKDLREKMFKRTRKGQPVMKYRIEQILETLQGS 186
           F+A+KE K++AESRRK+ + KM ++TR GQPVMKYRIE +LE+++ S
Sbjct: 139 FQAKKEAKEEAESRRKEAKGKMLRKTRHGQPVMKYRIEHLLESIKKS 178

The following BLAST results are available for this feature:

BLAST of Spo05651.1 vs. NCBI nr
BLAST of Spo05651.1 vs. UniProtKB/TrEMBL
BLAST of Spo05651.1 vs. ExPASy Swiss-Prot
BLAST of Spo05651.1 vs. TAIR (Arabidopsis)

BLAST of Spo05651.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902169571\|gb\|KNA07675.1\|	1.8e-85	100.	hypothetical protein SOVF_1697...	[more]
gi\|731369013\|ref\|XP_010696417.1\|	9.5e-58	78.1	PREDICTED: rRNA-processing pro...	[more]
gi\|920696281\|gb\|KOM39506.1\|	3.3e-42	58.6	hypothetical protein LR48_Viga...	[more]
gi\|225436791\|ref\|XP_002268903.1\|	4.3e-42	58.8	PREDICTED: rRNA-processing pro...	[more]
gi\|965671743\|dbj\|BAT86350.1\|	7.3e-42	58.6	hypothetical protein VIGAN_043...	[more]

BLAST of Spo05651.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9QK98_SPIOL	1.3e-85	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8E1H5_BETVU	6.6e-58	78.1	Uncharacterized protein OS=Bet...	[more]
A0A0L9UA04_PHAAN	2.3e-42	58.6	Uncharacterized protein OS=Pha...	[more]
A0A0S3S0I4_PHAAN	5.1e-42	58.6	Uncharacterized protein OS=Vig...	[more]
F6HQ16_VITVI	6.6e-42	58.3	Putative uncharacterized prote...	[more]

BLAST of Spo05651.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Spo05651.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1


Match Name	E-value	Identity	Description
AT4G03180.1	7.8e-34	49.1	rRNA processing (InterPro:IPR0...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013730	Fyv7/TAP26	PANTHER	PTHR15657	UNCHARACTERIZED	coord: 1..188 score: 6.8
IPR013730	Fyv7/TAP26	PFAM	PF08524	rRNA_processing	coord: 57..183 score: 2.5
None	No IPR available	unknown	Coil	Coil	coord: 139..159 scor
None	No IPR available	PANTHER	PTHR15657:SF1	THYROID TRANSCRIPTION FACTOR 1-ASSOCIATED PROTEIN 26	coord: 1..188 score: 6.8

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019438	aromatic compound biosynthetic process
biological_process	GO:0080005	photosystem stoichiometry adjustment
biological_process	GO:0006446	regulation of translational initiation
biological_process	GO:0007264	small GTPase mediated signal transduction
biological_process	GO:0006913	nucleocytoplasmic transport
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0009555	pollen development
biological_process	GO:0042744	hydrogen peroxide catabolic process
biological_process	GO:0009793	embryo development ending in seed dormancy
biological_process	GO:0006412	translation
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0071840	cellular component organization or biogenesis
biological_process	GO:0006470	protein dephosphorylation
biological_process	GO:0006633	fatty acid biosynthetic process
biological_process	GO:0009767	photosynthetic electron transport chain
biological_process	GO:0015979	photosynthesis
biological_process	GO:0051186	cofactor metabolic process
biological_process	GO:0098542	defense response to other organism
biological_process	GO:0019682	glyceraldehyde-3-phosphate metabolic process
biological_process	GO:0008299	isoprenoid biosynthetic process
biological_process	GO:0072330	monocarboxylic acid biosynthetic process
biological_process	GO:1901362	organic cyclic compound biosynthetic process
biological_process	GO:1901564	organonitrogen compound metabolic process
biological_process	GO:0006139	nucleobase-containing compound metabolic process
biological_process	GO:0046148	pigment biosynthetic process
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0005840	ribosome
cellular_component	GO:0009579	thylakoid
cellular_component	GO:0031977	thylakoid lumen
cellular_component	GO:0008287	protein serine/threonine phosphatase complex
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0009534	chloroplast thylakoid
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0016020	membrane
cellular_component	GO:0032040	small-subunit processome
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0003743	translation initiation factor activity
molecular_function	GO:0004722	protein serine/threonine phosphatase activity
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0051082	unfolded protein binding
molecular_function	GO:0031072	heat shock protein binding
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0046872	metal ion binding

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo22999	0.77	Barchart \| Table
Spo23384	0.76	Barchart \| Table
Spo21808	0.75	Barchart \| Table
Spo18111	0.73	Barchart \| Table
Spo00872	0.72	Barchart \| Table
Spo12228	0.72	Barchart \| Table
Spo11509	0.72	Barchart \| Table
Spo03195	0.72	Barchart \| Table
Spo19288	0.72	Barchart \| Table
Spo02648	0.71	Barchart \| Table
Spo23712	0.71	Barchart \| Table
Spo23286	0.70	Barchart \| Table
Spo02696	0.70	Barchart \| Table
Spo15084	0.70	Barchart \| Table
Spo27346	0.69	Barchart \| Table
Spo01401	0.69	Barchart \| Table
Spo05733	0.69	Barchart \| Table
Spo06953	0.69	Barchart \| Table
Spo09149	0.69	Barchart \| Table
Spo09428	0.69	Barchart \| Table
Spo09752	0.69	Barchart \| Table
Spo09798	0.69	Barchart \| Table
Spo11524	0.69	Barchart \| Table
Spo14403	0.69	Barchart \| Table
Spo24016	0.69	Barchart \| Table
Spo13281	0.68	Barchart \| Table
Spo11688	0.68	Barchart \| Table
Spo23249	0.68	Barchart \| Table
Spo01437	0.68	Barchart \| Table
Spo04433	0.68	Barchart \| Table
Spo09769	0.68	Barchart \| Table
Spo04653	0.68	Barchart \| Table
Spo13180	0.68	Barchart \| Table
Spo06004	0.68	Barchart \| Table
Spo15302	0.67	Barchart \| Table
Spo09536	0.67	Barchart \| Table
Spo07915	0.67	Barchart \| Table
Spo01305	0.67	Barchart \| Table
Spo11951	0.67	Barchart \| Table
Spo20106	0.67	Barchart \| Table
Spo21446	0.67	Barchart \| Table
Spo02513	0.66	Barchart \| Table
Spo20912	0.66	Barchart \| Table
Spo09387	0.66	Barchart \| Table
Spo25196	0.66	Barchart \| Table
Spo22507	0.66	Barchart \| Table
Spo24081	0.66	Barchart \| Table
Spo26673	0.66	Barchart \| Table
Spo13240	0.66	Barchart \| Table
Spo00667	0.66	Barchart \| Table
Spo24590	0.65	Barchart \| Table
Spo11417	0.65	Barchart \| Table
Spo09267	0.65	Barchart \| Table
Spo07967	0.65	Barchart \| Table
Spo06398	0.65	Barchart \| Table
Spo19917	0.65	Barchart \| Table
Spo10493	0.65	Barchart \| Table