Spo05598 (gene)

Overview
NameSpo05598
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
Locationchr4 : 116058067 .. 116061642 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGCTGGAGGATGGTATATTGTTACTTGGCTAACTTTTTTGGGGTTGATATCTGAGAAGGGCAGAAGGCCATTTCCCCCACCTCACAGCACACCGACAGTAAATTAAATGTGGCCTGTTTGCTCTTTGTTGATTCAAAAGTGCCTCTTAAACTTACTGCAGCTGCTCTCACAGATTTCGTCGAGGTCATTTTCAGGTCACAGCTCTGATTATTTATAACCACCGGCCACAAATTCCTTTTTGTTTATTATTATTTTTAGCCATGGCTGCTGCTAAAAAAAAGATAGGTGCAGCTCTGTTCTTCAATATGTGTTGGTGGGGAAATTTGTGTTTGTAGCTCTCCTACAACCAAAAACTAATATGGGATGTTTCATATTGCCACTAGAAGAAGTCTAAGAAGACGAATGTAGCCTGCCTCTTTCCTTCTTTTCCCCCTTTTTTGACCTTAAAATGTTGGTGAGAAAGGAGCTGTTTAAAACAAACAACTAGTGAATTGATTTATTTATTTCTTTCAAGTATGATTAGTACAATTTTTTCTTCTCTTCTACTTATTTTTTTTCTGGGGGTAATTATTATGATAATAACACTTTAGAGGATACTTTTGTTCTTATCTGACACTGTTGTAATATTCAGATAGTAATTATTTCTTCCAAGGATCATTTCTGTTTTAAATTTTTATTTCTGTAGTCGTCGCAGTGCAGCATTATTGTAGAAGAGAATAACGTGGTCCTGATTCAATTAGTGACATTCATTATGAACTGGAATAAATCTTCCCTCCCCTGAATATTATCCTCCCTCTGACCTAATTGAAATCGCCTATTTTGACTCTCCTACATCAGACTTCAATCTTACGAGCACCACTTATCACAGAGAGCCCCCATACCCAAAACTACACTAGTTAACCCATACTTTTAATGTTATTATCCAAATTATTAAGGGGGTGTTTGGTTTGCGGATTCTAGGTATGAGGTATAGGTTTAGAATGGTCTAAATCCATACCATGTGTTTGGTTGACAATTTTAAGAGTTTTAAACCCATACCTCAAACCTCCAAGGTATGAGGTTTAGAAACCTAGGGGAGGAAACTCACTCCCAAATTGAACCAAACACATGGTATTAATGCTCCTTGGCCTCCAATCCATCCACCCATTACAGTTTTACACTTTAGTTTCTTTTGCCAAGTAAAGCTCAAAGATGAAGGCCATTTTCACAGGTCCTGCGTGAGTCATTGACGAGTTCCATCAACAAGTGTTATTAACTGTAACGTGACATCCTCTCTCGCCAAGCTCAATGTTAAAGACATAAGTAAACTCTTGTATGAAAATTCCAAAATATATGATATTGCAGACTGCAAATATTTCCATGAAAAATCAGAGTTAGTAAATTACCAGTAGAAGCTTAATTTACAAAGATAAATAACCAAGTACGAGATTAGTTTAAGCTCTTCAACATTAGAGTATGTATAATCAGTTTGAAGGCTCTAGAGATTCGAAAGTAGGGGAGTACAAGTGCAACCATGGGGTACTAACTTTTTCATGAAATTTATACTCATGGGCCTTCACCTTTAACTTCAATTCCTGAATGTGAGCATCATATTGAGACAAAAACTCTCCTAACTCTTGTATCAGAACTTCAAGGCTACCTATCTCGGCTTTAACACACTTAGCCAAAGAATACCCTTGTCTGTATGTTTCCTCTCCAAGCTTCAACTCTAATGTCTGCAACTTAGCAAGTATTAGGTCGAGTTTTCTTACTTCACCTTTTGCACGCTCATTCTCATGACATGCTTCTTCATATCGACTCCTGTCTGTTGCACCTTCTGAACTTACAGCAAGGTTCTTGAGGTGTTGTAGACGAGCAAGGATGAAGCTGACATTCATTCCATAAGCTTCATACGTCTTCAAGGATTGGTCCCATAATTCATACTTTTGGAGGAAGGTGGAGAGCTTGCAAGTACTCAACTCGTTAGCTATGTTGACTGTGTCAAGTATAATTCTTGTAATGGCTCCAGCAATGATCTGATTATTCAACCTTGGATTGAATCCTCTGAATAAATGAGCGTGAAGGAAAGCATTCTGATTGCAACAGAGTTGGTAATAATCATGTAGAGCATAGTGAGGCAGCTGGTGGTTTTGAATCAACTTGTTCATAACCGCTTTAAACTCTTCAAAGCTAGTAATATTACTGAACAAAACACCTTGACCAACTAAAATGGAACCTTCACCATTTCTGGATTTGAGCCTTGCACTCTTCCAACGTAACTGTTGTTCTATTCGATCTACTTTCCTTGTGTACACGATTAGCTGCCTGCTATCTGCTTTACACGGAATGCTCTGCTTAACATGACTCAATAAATCAAGGAGATGATTTGGGAGATTGACTTCCTTTGCATTTGCTCTTATGATGTATACCTATAGAGGAGTAGAGTTTTATCAATAAGAAAGTACAAACCCCATAGATAACTAGCTTTTATCAATAACTACCTTAAATTTGGCAGCCTCGATTAAGTGGAGAACAACAGCATCTCCTTCTTCCAGTCTCATTTTTGTCACAAACCTAAACCACCCAGCACTAAGTCTGCAAGATTGAGGCAGATACTTGGTAGTGTATTGTTCTCCTGTTTCTGTCTCGAGTACCATATTAGTAACTATCACGGGTAAATGCGCCCTACAATATGGCGCAGGAAGTGCCTGTGACTCCATCAAAAGAACCAAACAGCTCAAGATAAACATATACTCATGTAAGGGAGTAGTTAGTAGTAAAGCATGATTCGAAATACTAACCAAAGTACCACCCCTAGAAATGTTCCCTTTCATCAACCATTTCACGGTAACTGGATGTTCAAAGTCCAGCTCTGACTGAATATTTTTAGCATGAACCAAATCACCTTTCCCTAAGACCTGTCCAAGATTTAAGTAGGGAAAATATCTAATCAACAAAATCAAGTATATTTCATCATTTTCAGAACAGTCATAAGTCATACCCACCTGAGGCACAACCAAATCTTTCCTCCAAAACTTCTTAGCCCTTAACTCCTTTATCTTCCTCTGCAAGTAATTGTGATGTACTTCCCCTCTGTTATAGAAGCTTTGCTGGTTTCTGCCTGCTTTGCTTGAAACTCTTTCCTTAACGCGATTTACCAAGTTAAGGAGATAAACAGGAAAATGGACTTCATTTGTGGAATTCACCCGTATGAAAAATATCTGTGAATAAAGTTTTCAAAGCGTCATTTACGAAGAAAGAGGTACTTGTATTTGTTGTCAATTAGCTACAATCAGGTAGAAGTGATGGTAGAAGATTATTACACATTTACTACACATAATCCATTAGTATCCAGAAGCACTCTTAACAAAGCTAACCTTAAATTTGGTAGGTTGAACCAATTGAAAAATAAGAGTATCTCCTTGTTCCAATTTCATGTCTATGGCAAACCTTCTCCACCCACCACTGAGTCCATAACAATGAGGCAGATACTTGGCTTCGTATCGTTCTCCAGTATCTGTCTCGAGTACCATAATAGTAGGATTTTTTACTGGTATATGCGCCTTACAAAAGGGCAGAGGAAGTCTCTGTGA

mRNA sequence

ATGGAGCTGGAGGATGGGCAGAAGGCCATTTCCCCCACCTCACAGCACACCGACAGTAAATTAAATGTGGCCTGTTTGCTCTTTGTTGATTCAAAAGTGCCTCTTAAACTTACTGCAGCTGCTCTCACAGATTTCGTCGAGTCGTCGCAGTGCAGCATTATTGTAGAAGAGAATAACGTGGTAGAAGTGATGGTAGAAGATTATTACACATTTACTACACATAATCCATTAGTATCCAGAAGCACTCTTAACAAAGCTAACCTTAAATTTGGTAGGTTGAACCAATTGAAAAATAAGAGTATCTCCTTGTTCCAATTTCATGTCTATGGCAAACCTTCTCCACCCACCACTGAGTCCATAACAATGAGGCAGATACTTGGCTTCGTATCGTTCTCCAGTATCTGTCTCGAGTACCATAATAGTAGGATTTTTTACTGGTATATGCGCCTTACAAAAGGGCAGAGGAAGTCTCTGTGA

Coding sequence (CDS)

ATGGAGCTGGAGGATGGGCAGAAGGCCATTTCCCCCACCTCACAGCACACCGACAGTAAATTAAATGTGGCCTGTTTGCTCTTTGTTGATTCAAAAGTGCCTCTTAAACTTACTGCAGCTGCTCTCACAGATTTCGTCGAGTCGTCGCAGTGCAGCATTATTGTAGAAGAGAATAACGTGGTAGAAGTGATGGTAGAAGATTATTACACATTTACTACACATAATCCATTAGTATCCAGAAGCACTCTTAACAAAGCTAACCTTAAATTTGGTAGGTTGAACCAATTGAAAAATAAGAGTATCTCCTTGTTCCAATTTCATGTCTATGGCAAACCTTCTCCACCCACCACTGAGTCCATAACAATGAGGCAGATACTTGGCTTCGTATCGTTCTCCAGTATCTGTCTCGAGTACCATAATAGTAGGATTTTTTACTGGTATATGCGCCTTACAAAAGGGCAGAGGAAGTCTCTGTGA

Protein sequence

MELEDGQKAISPTSQHTDSKLNVACLLFVDSKVPLKLTAAALTDFVESSQCSIIVEENNVVEVMVEDYYTFTTHNPLVSRSTLNKANLKFGRLNQLKNKSISLFQFHVYGKPSPPTTESITMRQILGFVSFSSICLEYHNSRIFYWYMRLTKGQRKSL
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo05598.1Spo05598.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo05598.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of Spo05598.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of Spo05598.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of Spo05598.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009987 cellular process
biological_process GO:0006886 intracellular protein transport
biological_process GO:0015031 protein transport
biological_process GO:0016192 vesicle-mediated transport
cellular_component GO:0030123 AP-3 adaptor complex
cellular_component GO:0031410 cytoplasmic vesicle
cellular_component GO:0043231 intracellular membrane-bounded organelle
molecular_function GO:0005488 binding
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo017800.66Barchart | Table
Spo096620.65Barchart | Table