Spo05265 (gene)

Overview
NameSpo05265
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
Locationchr5 : 11964658 .. 11965960 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CTATCCAAATATTTAAACTCAACATGGACCTTAAAATATAAAAATATATATATATAAATTGTCACGCTCCAATTTGACGTCCGCCTAAAAGTAAAGCCCCCATCTTCAAATGTTTGATTTGTTCAACAAAAGCAAAAATCAAACAACCCCCAAATCCCAAATACTACGTTTAAGTTTGGAAGAAATAAGATGCCGTGTTCTTCAATGCGGGCAATTTCTTCTTAACTTCCTTCAACTTTCCTTATTACTTAACCCCGAATCAATTATCCTCCTAATTGCCCATTTAATTTCTTTCAAGTTTTCAGGTACTCATTCTTTCTCATCTTCTTCACCAGTTTATGTTTTTCTTGATTTTGCTTATAAATAGAGTAATTAAGTGTTCTCATTCAGGTTTTCAGTGTTAATTTCTTCTGGGTAATTGCAATTTTCCATCTTTTTTTTCTGGGTTTTGCTGCTGTTATTGATTTCTTCACTTAAAATTTGCGAAGTTACTGAAATCTGAATCTTTGCAGCATATATTATTACGGAGTAGAAGTTATTTTCAGTTTGCTGCTTTGATTTTCTACTGAACTGTTGATTGAAACTATGAATTGAAAATTAATTTTTAAAATTTTCAGTTTTGCTCTAAATCAAAACTTTGATCATATTGTTTAGTGGGTGTTGGTGATTTGATTGAAGTCATTTTAAGTCGAATCTTTTGATTACGTTGGTAATTCAAATTATTTTTTCTACTGTTTGAGTGTGTGTCTGTTTGTTGTTCTGATTCTGCCTTTATTAGGATCCGTATTTGAAGTATGAATTCTGTAACCGTATAGTATTACTATGATGACAGGTTATTGTTATAGCCTTGGATATACGATACACTCGGGTGTATAATGAAAATTGTCGAAATCGTTGATGTTATGAACTGGTGTTTCCCTTTATTGGTTTTTAGTTATATATTTTTTGGTGGCTTGGATCTTTGATGAGTCTATGGAATCTAGAGAAAGTTCAAATTAAAGTTAAAGGAACACTTTTATGTCGACCTTTCTTGATTGTTTAATTTTCTCACTATTGAGATCTTGCCTTGACCAAGTTGAAGGGTTTACTGATTCTTGTTTTTGAAGTTTCAATAGGAATCTGATGTTTTTTTATATATTTACTTGATTCTGTAATTGGATGCTTGTGTTTTGTATTTCGGGTTTAATGATTATTTTGTCATTGATATCCTATGGTTGTTACATCATATGCTGTTTGCTGTTGCTGATTCATTTTGGTATTGGGATAATTTGCAGAAATCTTGTACAGTCGTTTTGCCGTGTAA

mRNA sequence

CTATCCAAATATTTAAACTCAACATGGACCTTAAAATATAAAAATATATATATATAAATTGTCACGCTCCAATTTGACGTCCGCCTAAAAGTAAAGCCCCCATCTTCAAATGTTTGATTTGTTCAACAAAAGCAAAAATCAAACAACCCCCAAATCCCAAATACTACGTTTAAGTTTGGAAGAAATAAGATGCCGTGTTCTTCAATGCGGGCAATTTCTTCTTAACTTCCTTCAACTTTCCTTATTACTTAACCCCGAATCAATTATCCTCCTAATTGCCCATTTAATTTCTTTCAAGTTTTCAGAAATCTTGTACAGTCGTTTTGCCGTGTAA

Coding sequence (CDS)

ATGTTTGATTTGTTCAACAAAAGCAAAAATCAAACAACCCCCAAATCCCAAATACTACGTTTAAGTTTGGAAGAAATAAGATGCCGTGTTCTTCAATGCGGGCAATTTCTTCTTAACTTCCTTCAACTTTCCTTATTACTTAACCCCGAATCAATTATCCTCCTAATTGCCCATTTAATTTCTTTCAAGTTTTCAGAAATCTTGTACAGTCGTTTTGCCGTGTAA

Protein sequence

MFDLFNKSKNQTTPKSQILRLSLEEIRCRVLQCGQFLLNFLQLSLLLNPESIILLIAHLISFKFSEILYSRFAV
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo05265.1Spo05265.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo05265.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo05265.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo05265.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo05265.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016556 mRNA modification
biological_process GO:0035265 organ growth
biological_process GO:0043085 positive regulation of catalytic activity
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0000023 maltose metabolic process
biological_process GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process GO:0019760 glucosinolate metabolic process
biological_process GO:0032984 protein-containing complex disassembly
biological_process GO:0019252 starch biosynthetic process
biological_process GO:0010207 photosystem II assembly
biological_process GO:0006508 proteolysis
cellular_component GO:0016020 membrane
cellular_component GO:0009523 photosystem II
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0009535 chloroplast thylakoid membrane
molecular_function GO:0005515 protein binding
molecular_function GO:0005525 GTP binding
molecular_function GO:0005509 calcium ion binding
molecular_function GO:0004222 metalloendopeptidase activity
RNA-Seq Expression