Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGACCAAATTCCTACAATTAAATTTACAGTTGAGAGAAATATTGAAGATGTATGATCAAGAGTACTTGGATTTTGTACTAGTTCCTTCTGGATTAGTAATCCTTGTGATATATCATGTATGGCTTGTGTTTGCCATTATTCGCCGTCCTCTTAAAACTGTTGTTGGCCTTAATGCGGTTATCCGACACCAATGGGTTCACCATATGATGAAGGTTTGTTCCTTTCTCTTCTTCCTTCAATTATTTGTTAGTCTGGTTTATTTTCTAATTTTATCCATTTATTTTATGATAACCCCATTGAAATCTTGCAAAATTGGACTATGTTGAGTTATCTTGCTTAAAATATAGCATACTGTTTGTTTTTTTGATGCAAAAAAGCTAGCCTCTGTAGATTTTGTGTCATTTTTAATTCTGTTTTACAAGTTTCTTCGATTTGGCTAGCCGGAGGGGGTTCGTACCTGTGACCTATTAAACACAGTCACTTAGACTTAACCATTAGGCCAAAAACTCCTTGACTGAAAGTGTTGAATATACTTGATACTAGTCCAACTTTTCAAGTGTGATACCCAGGCATGCACTCAGGCAGATTTAGGAAAATTTTGCATGTTTTGGTCGAACATGAAGTTCATAGATGTCACCGCAACACTGTGTCATACCCTTGTCCAAGTATCGAGTACACGATACAAGTACTTAAAATGAAATGTAGAGTCAGAGTAACTATACAAGTAGGCTAACCTAAAAACATTTGTGTTTAGGATCCAGGGAAGAATGGTGTTTTGGCTATACAAACAATACGGAACAACCTAATGGCGGCAACACTATTAGCAACAATAGCAATAACTCTGAGTTCCCTGATAAGTGCTATTGTGAGCAGCTCAAGTAATCTGATATTTACAATACACACAACCAAGTATTTATCAGTTCTAATATGCTTCCTTGTAGCATTCTTCTGCAATGTGCAGACTATCAGATACTTTGCCCATGTTAGTTTCCTTATTAATGTACGACCATCATGCGACGAGCTAGGGAGAGAAGAGTTTATTGAATATGTCTCCCAACAGTTGAACCGTGGCAGCTTGTTTTGGTCACTGGGATTGAGAGCTTTCTACTTTTCTTTCCCCCTTCTGCTCTGGATATTCGGCGCTATTACAATGTTGGCTTGTAGCTGCTTGTTGGTAATTTTGCTCTATTTCTTGGATACTGCTACCTCTTCTCCAAGTTATCTTCACAGTTGCAAGGTCAACAATGACACCAACAACACTGATATTGAATCAACATGTCACTCAATGTAAGTACTACTGTAACCATCTGATTATAGTATCAGCATCTTACCCCAGTCCTCGCGATGATAAAATATAATACACGGG ATGACCAAATTCCTACAATTAAATTTACAGTTGAGAGAAATATTGAAGATGTATGATCAAGAGTACTTGGATTTTGTACTAGTTCCTTCTGGATTAGTAATCCTTGTGATATATCATGTATGGCTTGTGTTTGCCATTATTCGCCGTCCTCTTAAAACTGTTGTTGGCCTTAATGCGGTTATCCGACACCAATGGGTTCACCATATGATGAAGGATCCAGGGAAGAATGGTGTTTTGGCTATACAAACAATACGGAACAACCTAATGGCGGCAACACTATTAGCAACAATAGCAATAACTCTGAGTTCCCTGATAAGTGCTATTGTGAGCAGCTCAAGTAATCTGATATTTACAATACACACAACCAAGTATTTATCAGTTCTAATATGCTTCCTTGTAGCATTCTTCTGCAATGTGCAGACTATCAGATACTTTGCCCATGTTAGTTTCCTTATTAATGTACGACCATCATGCGACGAGCTAGGGAGAGAAGAGTTTATTGAATATGTCTCCCAACAGTTGAACCGTGGCAGCTTGTTTTGGTCACTGGGATTGAGAGCTTTCTACTTTTCTTTCCCCCTTCTGCTCTGGATATTCGGCGCTATTACAATGTTGGCTTGTAGCTGCTTGTTGGTAATTTTGCTCTATTTCTTGGATACTGCTACCTCTTCTCCAAGTTATCTTCACAGTTGCAAGGTCAACAATGACACCAACAACACTGATATTGAATCAACATGTCACTCAATGTAAGTACTACTGTAACCATCTGATTATAGTATCAGCATCTTACCCCAGTCCTCGCGATGATAAAATATAATACACGGG ATGACCAAATTCCTACAATTAAATTTACAGTTGAGAGAAATATTGAAGATGTATGATCAAGAGTACTTGGATTTTGTACTAGTTCCTTCTGGATTAGTAATCCTTGTGATATATCATGTATGGCTTGTGTTTGCCATTATTCGCCGTCCTCTTAAAACTGTTGTTGGCCTTAATGCGGTTATCCGACACCAATGGGTTCACCATATGATGAAGGATCCAGGGAAGAATGGTGTTTTGGCTATACAAACAATACGGAACAACCTAATGGCGGCAACACTATTAGCAACAATAGCAATAACTCTGAGTTCCCTGATAAGTGCTATTGTGAGCAGCTCAAGTAATCTGATATTTACAATACACACAACCAAGTATTTATCAGTTCTAATATGCTTCCTTGTAGCATTCTTCTGCAATGTGCAGACTATCAGATACTTTGCCCATGTTAGTTTCCTTATTAATGTACGACCATCATGCGACGAGCTAGGGAGAGAAGAGTTTATTGAATATGTCTCCCAACAGTTGAACCGTGGCAGCTTGTTTTGGTCACTGGGATTGAGAGCTTTCTACTTTTCTTTCCCCCTTCTGCTCTGGATATTCGGCGCTATTACAATGTTGGCTTGTAGCTGCTTGTTGGTAATTTTGCTCTATTTCTTGGATACTGCTACCTCTTCTCCAAGTTATCTTCACAGTTGCAAGGTCAACAATGACACCAACAACACTGATATTGAATCAACATGTCACTCAATGTAA MTKFLQLNLQLREILKMYDQEYLDFVLVPSGLVILVIYHVWLVFAIIRRPLKTVVGLNAVIRHQWVHHMMKDPGKNGVLAIQTIRNNLMAATLLATIAITLSSLISAIVSSSSNLIFTIHTTKYLSVLICFLVAFFCNVQTIRYFAHVSFLINVRPSCDELGREEFIEYVSQQLNRGSLFWSLGLRAFYFSFPLLLWIFGAITMLACSCLLVILLYFLDTATSSPSYLHSCKVNNDTNNTDIESTCHSM Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo05067.1 vs. NCBI nr
Match: gi|902222095|gb|KNA19094.1| (hypothetical protein SOVF_064820 [Spinacia oleracea]) HSP 1 Score: 443.4 bits (1139), Expect = 2.700e-121 Identity = 233/233 (100.00%), Postives = 233/233 (100.00%), Query Frame = 1
BLAST of Spo05067.1 vs. NCBI nr
Match: gi|731367493|ref|XP_010695642.1| (PREDICTED: uncharacterized protein LOC104908246 isoform X1 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 337.0 bits (863), Expect = 2.700e-89 Identity = 176/235 (74.89%), Postives = 202/235 (85.96%), Query Frame = 1
BLAST of Spo05067.1 vs. NCBI nr
Match: gi|731367495|ref|XP_010695643.1| (PREDICTED: uncharacterized protein LOC104908246 isoform X2 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 334.0 bits (855), Expect = 2.300e-88 Identity = 174/231 (75.32%), Postives = 199/231 (86.15%), Query Frame = 1
BLAST of Spo05067.1 vs. NCBI nr
Match: gi|902222094|gb|KNA19093.1| (hypothetical protein SOVF_064810 [Spinacia oleracea]) HSP 1 Score: 331.3 bits (848), Expect = 1.500e-87 Identity = 175/229 (76.42%), Postives = 200/229 (87.34%), Query Frame = 1
BLAST of Spo05067.1 vs. NCBI nr
Match: gi|470127203|ref|XP_004299565.1| (PREDICTED: uncharacterized protein LOC101293202 [Fragaria vesca subsp. vesca]) HSP 1 Score: 251.1 bits (640), Expect = 2.000e-63 Identity = 143/237 (60.34%), Postives = 175/237 (73.84%), Query Frame = 1
BLAST of Spo05067.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RJI0_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_064820 PE=4 SV=1) HSP 1 Score: 443.4 bits (1139), Expect = 1.900e-121 Identity = 233/233 (100.00%), Postives = 233/233 (100.00%), Query Frame = 1
BLAST of Spo05067.1 vs. UniProtKB/TrEMBL
Match: A0A0J8E376_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g126180 PE=4 SV=1) HSP 1 Score: 337.0 bits (863), Expect = 1.900e-89 Identity = 176/235 (74.89%), Postives = 202/235 (85.96%), Query Frame = 1
BLAST of Spo05067.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RHX2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_064810 PE=4 SV=1) HSP 1 Score: 331.3 bits (848), Expect = 1.000e-87 Identity = 175/229 (76.42%), Postives = 200/229 (87.34%), Query Frame = 1
BLAST of Spo05067.1 vs. UniProtKB/TrEMBL
Match: A0A164UVD7_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_023226 PE=4 SV=1) HSP 1 Score: 244.6 bits (623), Expect = 1.300e-61 Identity = 140/234 (59.83%), Postives = 168/234 (71.79%), Query Frame = 1
BLAST of Spo05067.1 vs. UniProtKB/TrEMBL
Match: A0A0B0MXR8_GOSAR (Protein zinc induced facilitator-like 1 OS=Gossypium arboreum GN=F383_31326 PE=4 SV=1) HSP 1 Score: 243.0 bits (619), Expect = 3.700e-61 Identity = 139/239 (58.16%), Postives = 173/239 (72.38%), Query Frame = 1
BLAST of Spo05067.1 vs. TAIR (Arabidopsis)
Match: AT3G18215.1 (Protein of unknown function, DUF599) HSP 1 Score: 233.4 bits (594), Expect = 1.500e-61 Identity = 136/247 (55.06%), Postives = 172/247 (69.64%), Query Frame = 1
BLAST of Spo05067.1 vs. TAIR (Arabidopsis)
Match: AT5G24600.1 (Protein of unknown function, DUF599) HSP 1 Score: 190.7 bits (483), Expect = 1.100e-48 Identity = 114/224 (50.89%), Postives = 147/224 (65.62%), Query Frame = 1
BLAST of Spo05067.1 vs. TAIR (Arabidopsis)
Match: AT5G46060.1 (Protein of unknown function, DUF599) HSP 1 Score: 126.3 bits (316), Expect = 2.600e-29 Identity = 88/222 (39.64%), Postives = 131/222 (59.01%), Query Frame = 1
BLAST of Spo05067.1 vs. TAIR (Arabidopsis)
Match: AT4G31330.1 (Protein of unknown function, DUF599) HSP 1 Score: 123.6 bits (309), Expect = 1.700e-28 Identity = 82/213 (38.50%), Postives = 129/213 (60.56%), Query Frame = 1
BLAST of Spo05067.1 vs. TAIR (Arabidopsis)
Match: AT5G10580.1 (Protein of unknown function, DUF599) HSP 1 Score: 121.7 bits (304), Expect = 6.400e-28 Identity = 82/219 (37.44%), Postives = 129/219 (58.90%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo05067.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo05067.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo05067.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 0
BLAST of Spo05067.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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