Spo04990 (gene) | SpinachBase

Overview


Name	Spo04990
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Protein BRICK1, putative
Location	chr6 : 12121943 .. 12124621 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAAAATCGCGTTTGCAGAAAATGGTAGGAGAGAAAAAAAAATCTTTTTATACCGCGAGTGAGCCCATGCGCGCGTGGTTCTCTCATCCGGTCTTTCCTACACGCGCCGTAAGGCGGTCCTACCGAAAAGTTTCTCAAAGAACTAGGCCTTCAAGTTCCTCCACGATGCCGTGAGAAAGTAAAAGATTCAGCAAACAAATCTTCCCTTCAAAGAATTGCAAAGAAAACCAGTCAACTCCTCCAAGCAATACACTTCCTCCATGTAAACTGATTTCCAACTCAATCGTTAAATCAGAAGGTAACATCATCTTCATAATTGTTCATTGGTTTCGCATAATTCGAAGCAATTTAATTTACCTAGTTTGCTCGAAATTATTAACACAGATAACTGAATTAAATTTAGGGTTTTGTTGATGATTTGCAGCAGTTCAAATTACGCTTTTAATTGGAGGAAGAGAGAGAAGAATGGCGAAAGCTGGAGGAATCACAAATGCAGTGAACGTAGGGATTGCAGTGCAAGCAGATTGGGAAAATCGGGAGTTCATTTCTCATATCTCCCTCAACATTCATCGTCTTTTCGATTTCCTTGTCCAATTTGGTAATTTTCTCTTTTTCTTGTTTATTTTGATTTTTGGACTTTTTCTGATGATTTTTCGCTGAGTTTTGTATTGACTTTAATGTATTTAGGATAGTTTCAATTGAAATGTTTTTGATTTCCGGAATAACAATTTGTTGTCTAATTAAGAATATTTTGGCTAATTGAGGTTAGCAACAGGATTTGTATAAGGAATTCGTTGGATTATCTTCTATTTTGATACAATTTTCCTGTCAAGGGGTTGATTGTAAGAGCAGTGTTGCTTCTGGGGATAGAATTCCTTTATATTTTTCATTTTGGTTTTTACTTGGAACAATCTTGTTATTGTAAGGATCAATGTTGTTTTGTGTCTCGAAGTTGGTTTATCTTTTCTTTCTAGTGTCTGAGCACACCATGAAAGTATTATCCCAAAGCAAGGTGAATATGCTTAGCTAGAACTCTAGAAGGGGCAAATTGCTAGTACGAAATCAAGGACTTGTTTAACTATATCGATGGAAACCGATATTTGAAAGGGAATAGAATTCTGTAGTTAGAAATGCAAGCAGAAGGAAAACGAGTTGAACTTCTTGCAATAGATAAGGCTCGATGTTCTTCCATGTTACCAGAGTAGCTTAACCGGCATATTCTTAAGGCGAAACGTGGAGTCTACTGAATTTAAGGTCTCAGTTCAAAGTATCGGATGTCTATGTTGCTTCGTGAGGGTTTTTATGATGATATTTCAAAGTATGCAATTCTGCACAGATGAGAGAAATGGAGATTAGACACATAAGAGTGGTAATGCAGGACTCGTGATATGATGCCAATTTTGCCATCTAGTTTCTGCGAAGCAAGGTTAATATGCTGAGTGAAGGGCATAATGCTAGTATGAAATAAAAGAAGAGTTTAACAGCTTTAACTACATTGATGGAAACCGAAAGGGCATAGAATTCTGTAGCTGGAAAAGCGAGGGGAAGAAAACCGAGTTGAGATTCTTGCAATATCTAAGGATCTTATAAAAAGATGTTCTTCCATGTTCCCGGAGTAGTTTAAGCCGCATATTCTTAAAGGAGAAAAGTGAAGGTTATATTTAATCTTAGGTCTCAGTTCGAACTTCGAAGTATATGCATGTCAATGTTTCTTCATGAGGGTTATGATTTTGAAATTTCAATGCATGCAATTCTACACAGAGGACAGAGGAGATTGGACATAAGAGTGGTAATGCAGTGTACTAATTAATTATATGAGTGGTAATACTTATCTTCGTGGTTGAATGGGTTGGGCGACAAACTGACAATTAATTTGTATGCTGAGAGCCTGATATTAGGCTTTGTCATTTGCAATGGTGAATCCTTTTTTATGGAGAGCTCAATTTTAATTCTTGCCGTCATTCGGTCACATCTTTGTCTTGACTACAACAATGTTATATTTTCTGCCGAGGGAATATCATCCGCCAAAGGAAATTCTATGCTCAAGTTATTTTTGTGGGCTTGAGGGTTAGGGGTGAATATACTTGATCCAATTTTTGTGATTGGGGCTCAAGTTATCATTTTCTGCTACTTTTGGCAGCTTCCTGTACACAAAGTTCAATTCCTCATCCTACTACTGAGTTTGGAAGAGGAATCTTAATTGAGTTTCTATCCTGTGGCATTGGTGTAGTTTTGATTACAATAATAAAATTGTGCTAGTTTACTTTGTTTTTTTTTCCCCTCATGAATCATTTATGTTTTGGCAGAGGCTACAACAAAGAGTAAATTGTCAGCACTGAATGAGAAGCTTGATACACTAGAGCGGCGTCTTGAACTGCTTGAAGTCCAAGTGAGTACTGCGTCAGCTAACCCTTCTGTTTTCAAGTGATATGCTTAGATATTGTATTAATCTAGGAAAGACTACTTATTGTAATGCCTACTCAGCTCTTACGATTGCTGGATAGATGTAAAACATTATATCCTTGTATCTTCCCTGCTATAAATTCTAATTAGGCTTGATAAATACCTTAATGTTCGATATGTTCTGTAAAATCAAAATTTCTCTCCTCACTTCGTTAGTAACCATTCACTCATTTATCTTAACTTATTGGAACTTATTGAAATTTATTATTAATAATA

mRNA sequence

AGAAAATCGCGTTTGCAGAAAATGGTAGGAGAGAAAAAAAAATCTTTTTATACCGCGAGTGAGCCCATGCGCGCGTGGTTCTCTCATCCGGTCTTTCCTACACGCGCCGTAAGGCGGTCCTACCGAAAAGTTTCTCAAAGAACTAGGCCTTCAAGTTCCTCCACGATGCCGTGAGAAAGTAAAAGATTCAGCAAACAAATCTTCCCTTCAAAGAATTGCAAAGAAAACCAGTCAACTCCTCCAAGCAATACACTTCCTCCATGTAAACTGATTTCCAACTCAATCGTTAAATCAGAAGCAGTTCAAATTACGCTTTTAATTGGAGGAAGAGAGAGAAGAATGGCGAAAGCTGGAGGAATCACAAATGCAGTGAACGTAGGGATTGCAGTGCAAGCAGATTGGGAAAATCGGGAGTTCATTTCTCATATCTCCCTCAACATTCATCGTCTTTTCGATTTCCTTGTCCAATTTGAGGCTACAACAAAGAGTAAATTGTCAGCACTGAATGAGAAGCTTGATACACTAGAGCGGCGTCTTGAACTGCTTGAAGTCCAAGTGAGTACTGCGTCAGCTAACCCTTCTGTTTTCAAGTGATATGCTTAGATATTGTATTAATCTAGGAAAGACTACTTATTGTAATGCCTACTCAGCTCTTACGATTGCTGGATAGATGTAAAACATTATATCCTTGTATCTTCCCTGCTATAAATTCTAATTAGGCTTGATAAATACCTTAATGTTCGATATGTTCTGTAAAATCAAAATTTCTCTCCTCACTTCGTTAGTAACCATTCACTCATTTATCTTAACTTATTGGAACTTATTGAAATTTATTATTAATAATA

Coding sequence (CDS)

ATGGCGAAAGCTGGAGGAATCACAAATGCAGTGAACGTAGGGATTGCAGTGCAAGCAGATTGGGAAAATCGGGAGTTCATTTCTCATATCTCCCTCAACATTCATCGTCTTTTCGATTTCCTTGTCCAATTTGAGGCTACAACAAAGAGTAAATTGTCAGCACTGAATGAGAAGCTTGATACACTAGAGCGGCGTCTTGAACTGCTTGAAGTCCAAGTGAGTACTGCGTCAGCTAACCCTTCTGTTTTCAAGTGA

Protein sequence

MAKAGGITNAVNVGIAVQADWENREFISHISLNIHRLFDFLVQFEATTKSKLSALNEKLDTLERRLELLEVQVSTASANPSVFK

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo04990.1	Spo04990.1	mRNA

Homology

[Close]

BLAST of Spo04990.1 vs. NCBI nr
Match: gi|902194147|gb|KNA12467.1| (hypothetical protein SOVF_125430 [Spinacia oleracea])

HSP 1 Score: 162.5 bits (410), Expect = 3.100e-37
Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 1


		  
Query: 1  MAKAGGITNAVNVGIAVQADWENREFISHISLNIHRLFDFLVQFEATTKSKLSALNEKLD 60
          MAKAGGITNAVNVGIAVQADWENREFISHISLNIHRLFDFLVQFEATTKSKLSALNEKLD
Sbjct: 1  MAKAGGITNAVNVGIAVQADWENREFISHISLNIHRLFDFLVQFEATTKSKLSALNEKLD 60

Query: 61 TLERRLELLEVQVSTASANPSVFK 85
          TLERRLELLEVQVSTASANPSVFK
Sbjct: 61 TLERRLELLEVQVSTASANPSVFK 84

[Close]

BLAST of Spo04990.1 vs. NCBI nr
Match: gi|731343760|ref|XP_010683051.1| (PREDICTED: protein BRICK 1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 156.0 bits (393), Expect = 2.900e-35
Identity = 80/84 (95.24%), Postives = 83/84 (98.81%), Query Frame = 1


		  
Query: 1  MAKAGGITNAVNVGIAVQADWENREFISHISLNIHRLFDFLVQFEATTKSKLSALNEKLD 60
          MAKAGGITNAVNVGIAVQADWENREFISHISLNI RLFDFLVQFE+TTKSKL+ALNEKLD
Sbjct: 1  MAKAGGITNAVNVGIAVQADWENREFISHISLNIRRLFDFLVQFESTTKSKLAALNEKLD 60

Query: 61 TLERRLELLEVQVSTASANPSVFK 85
          TLERRLELLEVQV+TASANPSVFK
Sbjct: 61 TLERRLELLEVQVNTASANPSVFK 84

[Close]

BLAST of Spo04990.1 vs. NCBI nr
Match: gi|703132443|ref|XP_010105126.1| (hypothetical protein L484_016117 [Morus notabilis])

HSP 1 Score: 151.0 bits (380), Expect = 9.400e-34
Identity = 76/83 (91.57%), Postives = 81/83 (97.59%), Query Frame = 1


		  
Query: 1  MAKAGGITNAVNVGIAVQADWENREFISHISLNIHRLFDFLVQFEATTKSKLSALNEKLD 60
          MA+AGGITNAVNVGIAVQADWENREFISHISLN+ RLFDFLVQFEATTKSKL++LNEKLD
Sbjct: 1  MARAGGITNAVNVGIAVQADWENREFISHISLNVRRLFDFLVQFEATTKSKLASLNEKLD 60

Query: 61 TLERRLELLEVQVSTASANPSVF 84
          TLERRLELLEVQV TASANPS+F
Sbjct: 61 TLERRLELLEVQVGTASANPSLF 83

[Close]

BLAST of Spo04990.1 vs. NCBI nr
Match: gi|356531385|ref|XP_003534258.1| (PREDICTED: protein BRICK 1 [Glycine max])

HSP 1 Score: 150.2 bits (378), Expect = 1.600e-33
Identity = 75/83 (90.36%), Postives = 80/83 (96.39%), Query Frame = 1


		  
Query: 1  MAKAGGITNAVNVGIAVQADWENREFISHISLNIHRLFDFLVQFEATTKSKLSALNEKLD 60
          MA+AGGITNAVNVGIAVQADWENREFISHISLN+HRLFDFLVQFEATTKSKL++LNEKLD
Sbjct: 1  MARAGGITNAVNVGIAVQADWENREFISHISLNVHRLFDFLVQFEATTKSKLASLNEKLD 60

Query: 61 TLERRLELLEVQVSTASANPSVF 84
           LERRLELLEVQV  ASANPS+F
Sbjct: 61 VLERRLELLEVQVGNASANPSLF 83

[Close]

BLAST of Spo04990.1 vs. NCBI nr
Match: gi|764517319|ref|XP_011466613.1| (PREDICTED: protein BRICK 1 [Fragaria vesca subsp. vesca])

HSP 1 Score: 149.8 bits (377), Expect = 2.100e-33
Identity = 75/83 (90.36%), Postives = 81/83 (97.59%), Query Frame = 1


		  
Query: 1  MAKAGGITNAVNVGIAVQADWENREFISHISLNIHRLFDFLVQFEATTKSKLSALNEKLD 60
          MA+AGGITNAVNVGIAVQADWENREFISHISLN+ RLFDFLVQFEATTKSKL++LNEKLD
Sbjct: 1  MARAGGITNAVNVGIAVQADWENREFISHISLNVRRLFDFLVQFEATTKSKLASLNEKLD 60

Query: 61 TLERRLELLEVQVSTASANPSVF 84
          TLER+LELLEVQV TASANPS+F
Sbjct: 61 TLERKLELLEVQVGTASANPSLF 83

[Close]

BLAST of Spo04990.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QYX5_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_125430 PE=4 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 2.200e-37
Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 1


		  
Query: 1  MAKAGGITNAVNVGIAVQADWENREFISHISLNIHRLFDFLVQFEATTKSKLSALNEKLD 60
          MAKAGGITNAVNVGIAVQADWENREFISHISLNIHRLFDFLVQFEATTKSKLSALNEKLD
Sbjct: 1  MAKAGGITNAVNVGIAVQADWENREFISHISLNIHRLFDFLVQFEATTKSKLSALNEKLD 60

Query: 61 TLERRLELLEVQVSTASANPSVFK 85
          TLERRLELLEVQVSTASANPSVFK
Sbjct: 61 TLERRLELLEVQVSTASANPSVFK 84

[Close]

BLAST of Spo04990.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BZK8_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g152850 PE=4 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 2.000e-35
Identity = 80/84 (95.24%), Postives = 83/84 (98.81%), Query Frame = 1


		  
Query: 1  MAKAGGITNAVNVGIAVQADWENREFISHISLNIHRLFDFLVQFEATTKSKLSALNEKLD 60
          MAKAGGITNAVNVGIAVQADWENREFISHISLNI RLFDFLVQFE+TTKSKL+ALNEKLD
Sbjct: 1  MAKAGGITNAVNVGIAVQADWENREFISHISLNIRRLFDFLVQFESTTKSKLAALNEKLD 60

Query: 61 TLERRLELLEVQVSTASANPSVFK 85
          TLERRLELLEVQV+TASANPSVFK
Sbjct: 61 TLERRLELLEVQVNTASANPSVFK 84

[Close]

BLAST of Spo04990.1 vs. UniProtKB/TrEMBL
Match: W9S1C0_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_016117 PE=4 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 6.500e-34
Identity = 76/83 (91.57%), Postives = 81/83 (97.59%), Query Frame = 1


		  
Query: 1  MAKAGGITNAVNVGIAVQADWENREFISHISLNIHRLFDFLVQFEATTKSKLSALNEKLD 60
          MA+AGGITNAVNVGIAVQADWENREFISHISLN+ RLFDFLVQFEATTKSKL++LNEKLD
Sbjct: 1  MARAGGITNAVNVGIAVQADWENREFISHISLNVRRLFDFLVQFEATTKSKLASLNEKLD 60

Query: 61 TLERRLELLEVQVSTASANPSVF 84
          TLERRLELLEVQV TASANPS+F
Sbjct: 61 TLERRLELLEVQVGTASANPSLF 83

[Close]

BLAST of Spo04990.1 vs. UniProtKB/TrEMBL
Match: C6T217_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_09G202200 PE=2 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 1.100e-33
Identity = 75/83 (90.36%), Postives = 80/83 (96.39%), Query Frame = 1


		  
Query: 1  MAKAGGITNAVNVGIAVQADWENREFISHISLNIHRLFDFLVQFEATTKSKLSALNEKLD 60
          MA+AGGITNAVNVGIAVQADWENREFISHISLN+HRLFDFLVQFEATTKSKL++LNEKLD
Sbjct: 1  MARAGGITNAVNVGIAVQADWENREFISHISLNVHRLFDFLVQFEATTKSKLASLNEKLD 60

Query: 61 TLERRLELLEVQVSTASANPSVF 84
           LERRLELLEVQV  ASANPS+F
Sbjct: 61 VLERRLELLEVQVGNASANPSLF 83

[Close]

BLAST of Spo04990.1 vs. UniProtKB/TrEMBL
Match: M1BDY6_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400016688 PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 3.200e-33
Identity = 74/83 (89.16%), Postives = 81/83 (97.59%), Query Frame = 1


		  
Query: 1  MAKAGGITNAVNVGIAVQADWENREFISHISLNIHRLFDFLVQFEATTKSKLSALNEKLD 60
          MA+AGGITNAVNVGIAVQADWENREFISHISLN+ +LFDFLVQFEATTKSKL+ LNEKLD
Sbjct: 1  MARAGGITNAVNVGIAVQADWENREFISHISLNVRKLFDFLVQFEATTKSKLATLNEKLD 60

Query: 61 TLERRLELLEVQVSTASANPSVF 84
          TLERRLELLEVQVSTA+ANP++F
Sbjct: 61 TLERRLELLEVQVSTATANPALF 83

[Close]

BLAST of Spo04990.1 vs. ExPASy Swiss-Prot
Match: BRK1_ARATH (Protein BRICK 1 OS=Arabidopsis thaliana GN=BRK1 PE=1 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 1.100e-34
Identity = 73/83 (87.95%), Postives = 81/83 (97.59%), Query Frame = 1


		  
Query: 1  MAKAGGITNAVNVGIAVQADWENREFISHISLNIHRLFDFLVQFEATTKSKLSALNEKLD 60
          MAKAGGITNAVNVGIAVQADWENREFISHISLN+ RLF+FLVQFE+TTKSKL++LNEKLD
Sbjct: 1  MAKAGGITNAVNVGIAVQADWENREFISHISLNVRRLFEFLVQFESTTKSKLASLNEKLD 60

Query: 61 TLERRLELLEVQVSTASANPSVF 84
           LERRLE+LEVQVSTA+ANPS+F
Sbjct: 61 LLERRLEMLEVQVSTATANPSLF 83

[Close]

BLAST of Spo04990.1 vs. ExPASy Swiss-Prot
Match: BRK1_MAIZE (Protein BRICK1 OS=Zea mays GN=BRK1 PE=2 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 2.400e-29
Identity = 63/83 (75.90%), Postives = 75/83 (90.36%), Query Frame = 1


		  
Query: 1  MAKAGGITNAVNVGIAVQADWENREFISHISLNIHRLFDFLVQFEATTKSKLSALNEKLD 60
          M + GG+ N VNVGIAVQADWENREFIS+ISLN+ RLFDFL++FEATTKSKL++LNEKLD
Sbjct: 1  MGRGGGMGNPVNVGIAVQADWENREFISNISLNVRRLFDFLLRFEATTKSKLASLNEKLD 60

Query: 61 TLERRLELLEVQVSTASANPSVF 84
           LER+LE+LEVQV +A+ NPSVF
Sbjct: 61 ILERKLEVLEVQVGSATTNPSVF 83

[Close]

BLAST of Spo04990.1 vs. ExPASy Swiss-Prot
Match: BRK1_ORYSJ (Probable protein BRICK1 OS=Oryza sativa subsp. japonica GN=Os02g0829900 PE=3 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 3.100e-29
Identity = 66/85 (77.65%), Postives = 78/85 (91.76%), Query Frame = 1


		  
Query: 1  MAKAGG--ITNAVNVGIAVQADWENREFISHISLNIHRLFDFLVQFEATTKSKLSALNEK 60
          MA+AGG  + N VNVGIAVQADWENREFIS+ISLN+ RLFDFL++FEATTKSKL++LNEK
Sbjct: 1  MARAGGHGMGNPVNVGIAVQADWENREFISNISLNVRRLFDFLLRFEATTKSKLASLNEK 60

Query: 61 LDTLERRLELLEVQVSTASANPSVF 84
          LD LER+LE+LEVQVS+A+ NPSVF
Sbjct: 61 LDILERKLEVLEVQVSSATTNPSVF 85

[Close]

BLAST of Spo04990.1 vs. ExPASy Swiss-Prot
Match: BRK1_DICDI (Protein BRICK1 OS=Dictyostelium discoideum GN=brk1 PE=1 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 1.200e-9
Identity = 29/59 (49.15%), Postives = 43/59 (72.88%), Query Frame = 1


		  
Query: 17 VQADWENREFISHISLNIHRLFDFLVQFEATTKSKLSALNEKLDTLERRLELLEVQVST 76
          +Q DWE REFI  +S+NI ++ +FL +FE +T++KLS LNEKL  L+R+++ LE    T
Sbjct: 7  IQKDWEQREFIEDMSINIQKIVEFLNKFELSTRNKLSDLNEKLTILDRQVDYLEATFKT 65

[Close]

BLAST of Spo04990.1 vs. ExPASy Swiss-Prot
Match: BRK1B_XENLA (Probable protein BRICK1-B OS=Xenopus laevis GN=brk1-b PE=3 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 1.400e-8
Identity = 27/58 (46.55%), Postives = 42/58 (72.41%), Query Frame = 1


		  
Query: 17 VQADWENREFISHISLNIHRLFDFLVQFEATTKSKLSALNEKLDTLERRLELLEVQVS 75
          +  DW NRE+I  I+ +I ++ DFL  F+ + +S+L+ LNEKL TLERR+E +E +V+
Sbjct: 12 IHQDWANREYIEVITSSIKKIADFLNSFDMSCRSRLATLNEKLTTLERRIEYIEARVT 69

[Close]

BLAST of Spo04990.1 vs. TAIR (Arabidopsis)
Match: AT2G22640.1 (BRICK1, putative)

HSP 1 Score: 146.7 bits (369), Expect = 6.200e-36
Identity = 73/83 (87.95%), Postives = 81/83 (97.59%), Query Frame = 1


		  
Query: 1  MAKAGGITNAVNVGIAVQADWENREFISHISLNIHRLFDFLVQFEATTKSKLSALNEKLD 60
          MAKAGGITNAVNVGIAVQADWENREFISHISLN+ RLF+FLVQFE+TTKSKL++LNEKLD
Sbjct: 1  MAKAGGITNAVNVGIAVQADWENREFISHISLNVRRLFEFLVQFESTTKSKLASLNEKLD 60

Query: 61 TLERRLELLEVQVSTASANPSVF 84
           LERRLE+LEVQVSTA+ANPS+F
Sbjct: 61 LLERRLEMLEVQVSTATANPSLF 83

The following BLAST results are available for this feature:

BLAST of Spo04990.1 vs. NCBI nr
BLAST of Spo04990.1 vs. UniProtKB/TrEMBL
BLAST of Spo04990.1 vs. ExPASy Swiss-Prot
BLAST of Spo04990.1 vs. TAIR (Arabidopsis)

BLAST of Spo04990.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902194147\|gb\|KNA12467.1\|	3.1e-37	100.	hypothetical protein SOVF_1254...	[more]
gi\|731343760\|ref\|XP_010683051.1\|	2.9e-35	95.2	PREDICTED: protein BRICK 1 [Be...	[more]
gi\|703132443\|ref\|XP_010105126.1\|	9.4e-34	91.5	hypothetical protein L484_0161...	[more]
gi\|356531385\|ref\|XP_003534258.1\|	1.6e-33	90.3	PREDICTED: protein BRICK 1 [Gl...	[more]
gi\|764517319\|ref\|XP_011466613.1\|	2.1e-33	90.3	PREDICTED: protein BRICK 1 [Fr...	[more]

BLAST of Spo04990.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9QYX5_SPIOL	2.2e-37	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8BZK8_BETVU	2.0e-35	95.2	Uncharacterized protein OS=Bet...	[more]
W9S1C0_9ROSA	6.5e-34	91.5	Uncharacterized protein OS=Mor...	[more]
C6T217_SOYBN	1.1e-33	90.3	Uncharacterized protein OS=Gly...	[more]
M1BDY6_SOLTU	3.2e-33	89.1	Uncharacterized protein OS=Sol...	[more]

BLAST of Spo04990.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
BRK1_ARATH	1.1e-34	87.9	Protein BRICK 1 OS=Arabidopsis...	[more]
BRK1_MAIZE	2.4e-29	75.9	Protein BRICK1 OS=Zea mays GN=...	[more]
BRK1_ORYSJ	3.1e-29	77.6	Probable protein BRICK1 OS=Ory...	[more]
BRK1_DICDI	1.2e-9	49.1	Protein BRICK1 OS=Dictyosteliu...	[more]
BRK1B_XENLA	1.4e-8	46.5	Probable protein BRICK1-B OS=X...	[more]

BLAST of Spo04990.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1


Match Name	E-value	Identity	Description
AT2G22640.1	6.2e-36	87.9	BRICK1, putative	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019466	Matrilin, coiled-coil trimerisation domain	GENE3D	1.20.5.30		coord: 41..73 score: 7.
None	No IPR available	unknown	Coil	Coil	coord: 45..79 scor
None	No IPR available	PANTHER	PTHR33668:SF1	PROTEIN BRICK1	coord: 5..83 score: 2.0

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045010	actin nucleation
biological_process	GO:0007163	establishment or maintenance of cell polarity
biological_process	GO:0010090	trichome morphogenesis
biological_process	GO:0007015	actin filament organization
cellular_component	GO:0005856	cytoskeleton
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0031209	SCAR complex
molecular_function	GO:0042802	identical protein binding

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo07192	0.68	Barchart \| Table