Spo04698 (gene)

Overview
NameSpo04698
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
Locationchr4 : 36945477 .. 36948601 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATACTAGTAATTTACTTAGTTTTGATTATTAACACATGTTAGTGTTTTGATTTTTCACATATTTCACTACAAAAAGTATCCCAAACATAGTGAAAAAGAATAAATTTTTATGATATGTTTGGATTGATGGTATTACGAAGTAATAAAAGTCAAAATAAAGAAAAATATGGTGATTTTGACTTGAATTTGGGATTGAAGCTTAAATGCATATTGGTAACAGGAAGAGAAAAGTGACTTGTTATACAACGGCATAAGATTTAACAAAAACGTTCTAATTTACCATGAACTTCCCACTATACCCTTATTAGATTTTTTTCCCAATTACCTGCCCCTTTACCTCCTTTACTGACTCTCTCCTCATCTATAGTTTTCTCTCTCCTTTCACTCTCTCTCCTCACCTTCACTGATAATCCGGCACCACTGTTATTGTCCACCGTCCTCCATCGGCGCTGCCCTTCGAAGTTACCTTGCTTGCTCATGTTCTCTCCTCTTCAAAGATCTAACCATTACAATTGAAGTCGTTGCTTGTTCCTACCTCCGCGGACTATATGTCGAAGGGATTTGAATTCTCCAGTTCCAACCACCGCCAACCATCGCTCCAGCCAACGATGCTCGTCAAGCCGCCTAACTAGCGTCTCCTCTTCTGTTCAAAGGTTTATTTAATTTTGCTTTCTTTTTGATTTATATATTTCTCAATAAAGATCCTCAATTTCTGAAATTGGATTCATATGGTGAAGGGTTCTTCGTATTTGTTGGAGATGAATCAAATAGTTGGATAGGCGTGAAAGGTGTGGTTGTCAAAGCCCCAAAGGTACTGTTCTTCCCATGGTTGTTTTGAATCTGTAAAATTCAGCAATGGTGAAGAACGAGAATGAGACTATGGTTGATCTAGTCTTGCCCTAGGGTAAGACTGTGTTAGATGTAGTCTGTTCAATGTTTAGACTCAACTAAAGCTAGTATTCCCTTGGGACCTGACTAGTTTTTTGGCAAGAATAAGACTAGAGCTGGTCTTATCTTGCCCGTAGGTCAGACTTTGTTAGACCTAGTCCTGTCAATGGTTAAGACTCAATTTACCTTAGTCTCCCCTTAGGGCCTAACTGAGTTTTGGCTAGTCCCGTTTGTATTGTTGGTGTAGTTGTAATAATAATAGAAATAAGGTTGAGAGTTTTAAAACTTTAATCATATCTGCAAAATTTCATACCTTATGAGCTTTAGTATTGAGTGTTAAATACATATGCTCTGAAATAACCTTTTAGGGATGCAAAATTCATAATTGTCTATGTTGGGATTTAATGAATAATTTTGTAGATTATTCATGTCAATTTTAAATTATTGTCACCACCTGACATATAATATGGAAATTGTGCATAACTGTTAAAAGTATATATAACATTTGGGAAGTTAATAGTAATTATTGGTATTAGGATTTACGAAAGTATATACATTTAGGAAGTAAAATATATAGATTGAATGATGGTTGATGGTGATGCACTAGCTAGGTTGAATGATTCTTTCTTTTGGAGAATTGGTTGTGACTTTGAACAAAAAAAAGAGAGAAAAGGTCTTATAATAAAATGAGTTCAGTTTCCAAGTACCATATTGAATTGCTGGTTGGCTATGATCTTTGAAAAATCTGAGTGAAGACCTAACATCTGATGTGAGCTAAGGATTACTAATTTGCCATTAGTAAAACCAGATGTGTAGTGTAACTCATGAATGAACTTATTTATTACATGACAAATTCATCTCCCTTGTATCCAACCTAAAGTAGTACCCAATAATCTTAATGTTATTTCTTTAAAATTTTGAATATAAATGAATTTCAAGATGCTTCCGTAGATGTGGTTCTTTTACTATCTGTTGTGAATTAGCATAACTGGAAAATTTAGAGGAAGAAACTTAGATTGATAATTCTGGAAATACAATATCAAAGTATAGGTATCAAGTTGTGTTTCACTCCAAAAGAGTTATACCAGACTAAGATAACAATTCAATTTTGGATATCCCCTCTTTCCCTTCTTTTCTGTATATATTGTATTGTTCATTCCCGTTTCATTCTGTTTCCTCTAATTTGTTTTATGTCATGTTCTTCAAGTATCTCAACTGATTCATAATGCAAATCTAGCTACACCCCTCCTAAGTGTGGTTCATTACGTTACTGGTCGTCCAAAAGATTGATAATGATAATTGTTGTAGCGATTATTTATAGTCTAGACATGCCTTGTAACAACAAGGACTTAGTTAACCTGGAAAAAATAATCAAACAAATTGCCATATTAAAAGGCAACTAGGCAGTAGTGATTGTTGGAGTCTTCTACCTCTTGTGTAAATAGCTGATAATTTTGAGCATAAAAAAAATGGTAAGAAAATATATAATTTGCTCTTTAACGCATATTGCATATGCACGAGCATGCATTTTAGTGAGCCTATTTTTTTCTCAGTAGTTGAATCCTTCTCTAAAACACCATTAAGACTCACTTACAAGTACGAGTAAAATCCACCTTATTTCTTAGTGCTAATACGTTTTTTACGAGATGCATTTGCAGCTTGTTTTCATATTTTTATCGTAAATACTTCATGCTAATAACTCCAGTTTCATGAAATATCCTTTTATGTTCAATCTGTTGGTCTTTATGTCATGGAGCTAACAATATTTTTCTTTCTTTTTTTGACAAAAAGAGATGACAACTAAGGGTAAGAAATATGGAAAAGGGAAAAGTGCAATAAAAAGGGAGAAACTTTCAGCTAAGAATGTTGCATCTAAGAAGGATGTCGCTACACAGGACTCTGGACCACGACATCCTGGTAAGCGAGGTTTGCTAGCCTCCGAGAGAAGGAAGCGTTCACGGGCGACTATTGTGAAAGGACATTTGCAAGCTTTTGTTTTTGTATTTTGTCGAATGGCCATTTCCAAATCTTTGCAGGCATTATTATATCAGCCACCACGTTTGCATTTAAAGTAAATACGTAAGGGGCCTCCACCATTTTTCTTATGGGATGTTGTAATAATTTCAAAACCTTGTTGAATTGCAATATCTTTAGTCCATTCAAAAGCCGCATTTCGAGTAGCAAAACTTTGATTAGTTTCAAAATAAGAACTACAGTTAAATTCCATCTCCAC

mRNA sequence

ATGAATACTAAGATGACAACTAAGGGTAAGAAATATGGAAAAGGGAAAAGTGCAATAAAAAGGGAGAAACTTTCAGCTAAGAATGTTGCATCTAAGAAGGATGTCGCTACACAGGACTCTGGACCACGACATCCTGGTAAGCGAGGTTTGCTAGCCTCCGAGAGAAGGAAGCGTTCACGGGCGACTATTGTGAAAGGACATTTGCAAGCTTTTGTTTTTGTATTTTGTCGAATGGCCATTTCCAAATCTTTGCAGGCATTATTATATCAGCCACCACGTTTGCATTTAAAGTAAATACGTAAGGGGCCTCCACCATTTTTCTTATGGGATGTTGTAATAATTTCAAAACCTTGTTGAATTGCAATATCTTTAGTCCATTCAAAAGCCGCATTTCGAGTAGCAAAACTTTGATTAGTTTCAAAATAAGAACTACAGTTAAATTCCATCTCCAC

Coding sequence (CDS)

ATGAATACTAAGATGACAACTAAGGGTAAGAAATATGGAAAAGGGAAAAGTGCAATAAAAAGGGAGAAACTTTCAGCTAAGAATGTTGCATCTAAGAAGGATGTCGCTACACAGGACTCTGGACCACGACATCCTGGTAAGCGAGGTTTGCTAGCCTCCGAGAGAAGGAAGCGTTCACGGGCGACTATTGTGAAAGGACATTTGCAAGCTTTTGTTTTTGTATTTTGTCGAATGGCCATTTCCAAATCTTTGCAGGCATTATTATATCAGCCACCACGTTTGCATTTAAAGTAA

Protein sequence

MNTKMTTKGKKYGKGKSAIKREKLSAKNVASKKDVATQDSGPRHPGKRGLLASERRKRSRATIVKGHLQAFVFVFCRMAISKSLQALLYQPPRLHLK
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo04698.1Spo04698.1mRNA


Homology
[Close]
BLAST of Spo04698.1 vs. NCBI nr
Match: gi|902211453|gb|KNA16711.1| (hypothetical protein SOVF_086600 [Spinacia oleracea])

HSP 1 Score: 92.4 bits (228), Expect = 4.600e-16
Identity = 50/59 (84.75%), Postives = 54/59 (91.53%), Query Frame = 1 

		  

Query: 5  MTTKGKKYGKGKSAIKREKLSAKNVASKKDVATQDSGPRHPGKRGLLASERRKRSRATI 64
          MT+KGKK+GK KSAI REKLSAKNVASKKDVAT+DSGPRHP KRGLLA+ERRK S ATI
Sbjct: 1  MTSKGKKHGKRKSAITREKLSAKNVASKKDVATEDSGPRHPRKRGLLATERRKLSHATI 59
[Close]
BLAST of Spo04698.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RB38_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_086600 PE=4 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 3.200e-16
Identity = 50/59 (84.75%), Postives = 54/59 (91.53%), Query Frame = 1 

		  

Query: 5  MTTKGKKYGKGKSAIKREKLSAKNVASKKDVATQDSGPRHPGKRGLLASERRKRSRATI 64
          MT+KGKK+GK KSAI REKLSAKNVASKKDVAT+DSGPRHP KRGLLA+ERRK S ATI
Sbjct: 1  MTSKGKKHGKRKSAITREKLSAKNVASKKDVATEDSGPRHPRKRGLLATERRKLSHATI 59
The following BLAST results are available for this feature:
BLAST of Spo04698.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 1
Match NameE-valueIdentityDescription
gi|902211453|gb|KNA16711.1|4.6e-1684.7hypothetical protein SOVF_0866... [more]
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BLAST of Spo04698.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 1
Match NameE-valueIdentityDescription
A0A0K9RB38_SPIOL3.2e-1684.7Uncharacterized protein OS=Spi... [more]
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BLAST of Spo04698.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo04698.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006096 glycolytic process
biological_process GO:0006468 protein phosphorylation
biological_process GO:0016310 phosphorylation
biological_process GO:0010431 seed maturation
biological_process GO:0006094 gluconeogenesis
biological_process GO:0030243 cellulose metabolic process
biological_process GO:0016049 cell growth
biological_process GO:0015976 carbon utilization
biological_process GO:0016126 sterol biosynthetic process
biological_process GO:0000902 cell morphogenesis
biological_process GO:0006888 ER to Golgi vesicle-mediated transport
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0061025 membrane fusion
biological_process GO:0006144 purine nucleobase metabolic process
biological_process GO:0006913 nucleocytoplasmic transport
biological_process GO:0006623 protein targeting to vacuole
biological_process GO:0032482 Rab protein signal transduction
biological_process GO:0006470 protein dephosphorylation
biological_process GO:0080005 photosystem stoichiometry adjustment
biological_process GO:0009767 photosynthetic electron transport chain
biological_process GO:0009832 plant-type cell wall biogenesis
cellular_component GO:0005789 endoplasmic reticulum membrane
cellular_component GO:0000139 Golgi membrane
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005773 vacuole
cellular_component GO:0005794 Golgi apparatus
cellular_component GO:0009579 thylakoid
cellular_component GO:0008287 protein serine/threonine phosphatase complex
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005730 nucleolus
molecular_function GO:0003924 GTPase activity
molecular_function GO:0019003 GDP binding
molecular_function GO:0005515 protein binding
molecular_function GO:0016757 transferase activity, transferring glycosyl groups
molecular_function GO:0004674 protein serine/threonine kinase activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0004722 protein serine/threonine phosphatase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0004743 pyruvate kinase activity
molecular_function GO:0030955 potassium ion binding
molecular_function GO:0000287 magnesium ion binding
molecular_function GO:0005525 GTP binding
RNA-Seq Expression