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Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTACTATTAACGGCTGCCTCACCTCTATCTCTCCTTCCCGTACTCAATTGAAAAATACCTCCACTTTAAGGCCAACTTTCATTGCTAACAGCAGGGTTAACCCTTCTTCTTCTGTTCCTCCTTCCCTTATTAGAAACCAGCCCGTTTTCGCCGCCCCCGCCCCTATCATCACCCCTACTTTGGTACGTACATGTGCATTTTAATTTTTCGTAAATATTTAGTCATTCCCGTGTTACATTGTTATATAAGTACGTAGTAGATAACTAGATACATATTGGGTGACAGATATGTACTTAACGCGCATGTAGACATTTTAAGCCTCATTGTTAAATTTGAATTGCGGTTTTTTTTGGGTTCAGAGATAAGAAGTGTTACGTTATTCAAAATGAAATCTATATACTTAGCTAAGGGGCGTTTAGTTTCACTGGAACTGCAGTTTTCAATTTTTTGTTTTATGATTTGGATGTTGCATGATTTAAGTTGAAATATAAACTTAAAATTAGTCATAATTATATAATAATCATGTATGTTAATTTTTAAAACTGATAACAAAAAATAGAAAATGTGATTTTCATATTCTTGTTTTTTATATTTCAAATGAATAAAAAATGACACAGAATGAGCCTTACTAATTAATTAATTAACATCGTTTTAGTAAATTTGAGTCCTTTTTGTTTGTTAATTTTGTCATTGGCGTAAATTCATTTTGTTCTTCTTTAGACATTAGGACAGACAATGATATTGTATTCGACCTCTAATAATAGAATTTACCATGCATTACATACTTGTATATATAATAATCTCAAATTCTTCTTCCATGGAATAACGGTTCGAAGTTATACATTTTGCAGAAAGAAGATATGGCATACGAAGAAGCCATCGCTGCCCTTAAGAAGCTTCTAAGGTTTGTAAAGCTTGATGCTCCTCTTTCTTTGTTTTTAATAAATCACGAGTGAAAAGATGAAATTGGTACACAACTGTTATAGGAGAGTTAAAGCTTCATACTTTTGTTAAGTTGTAATTAATTTTAACTAATTTGATGTTTAATATACATAATACCATTTTGGTGCATTAATACATTGTATTATTGGATCGATGTCATTTTCCTCTACGAGCTAGCTAGCAATAAAGTGGTCATGTTTAGGTTGTGCATGGTAGGGACGAATTTAAATAAAAACGGGTGGTATACGTAAATTCATGCAAATAAAGAAATAAGAAACCATGACTACCACATATTGTACATTTGCATTGCCTCCCCATGAAGATGTACGCATTTGCATATTACCAGTCCCTAACATATACATTTAATTGTTGATATCTATAATTATGAAAATTCATATTTGAAACAAATCTAACAAAATAACAATGATTTAAAAAATCTTGTTTATAATTAAACTACAAAAAAATGATCACGCGCAAGAATAATAAATTGGTACATTTTCAAGGAACAAAGGCAGTCCATTGGATAAGATTGAATTGGATATGCAAACTCAATATACTTGGTACGTATTTCTCTGTTTGGAGGGGACAAAAGGGATATGAAATATGTCAAAGGTATTTGGGGAAAAAAACATTGACAACTTGAATAAAGGGTTTGAATGTTTAATCCTTATAGAAGTATAAAAGACGTACGAGTAGTATATAAATTGTTAAAGGACTTGCAGACTACCAATATGGTTGAATAATTAAAGTAGCTTAAATTATACCGTTGGTCTCGGATCACCCAATAATTTTCGTATGAAAGCGACTTTTGGAATTATAACTCTTTTGATATGTGACCGATTGATGTTGTGACATGCTGTTTTTTCCCGCAATAGTAAAGTCAATTCACTAATAAATGGTGACATGTTTATTAATTGCAGCGAGAAGGGAGAACTTGAAAATGAAGCCGCATCAAAGGTGGCACAGATAACATCTGAGTTAGCCGACGGTGGCACACCATCCGCCAGTTACCCGGTTCAGAGAATTAAGGAAGGGTTTATCAAATTCAAGAAGGAGAAATACGAGTAAGTTGTTATTTTATCATTTAATTTGTGTAATGTTTATGTAAAATTCACATTTTGCCAAAAAGGACCTTTTATAACACAAATTTTGCGAGAAAGGACCTTATATAATTTTTTTTGTGAAAACACACCTTAAAGTAATTTTTTTTGCGAGAAAGGACCTAAGGAAATTTTCCGGCATTGACTGAGCTTTTCCGGCCATTGGCTTGCACGTGAGCAGCACGCGTGGCTTACGTTGGCTAAAGACATTGATTTTCCCGAGTCTTGAATTTTTAAACTTGATTTTATTTCGACTTTTTTTTCAACTTTAGGTTTTAAATCTTAGAATTTTGGAGGAAAATTGGGTGTAATTAGCAAAATAAAGCCACACGTGCTTCTCACGTGCAAGTCAATGGCCGGAAAAGCTTAGTCAATGCCGAAAATTTACTTTTGGTTGTCTTTCGCAAAAAAAAAGTACATTAAGGTGTGATTTCACCAAAAAAAAATTATATAAGGTCCTTTATCGCAAAAAAATTTACATTAAGGTGTGATTTCACAAAAAAAATTATATAAGGTCCTTTCTCGCAAAATTTGGATTATAAAAGGTCCTTTTTAACAAATTTGCCTAATAAATTAGACTGAAAATATATGGACATATTTATTTGTAGGAAAAATCCAGCATTGTATGGTGAGCTTTCTAAGGGCCAAGCTCCCAAGGTACTTTACTTAATTTTAACTAAGCTAATTAGCTAGATATATAAGATCAACTTGGTTATATATAATTAATTTCATACATAGTACTCGAATAAATATGTTCATCGTACAACTGGTTGTACCATTCACGAGATATAACCCGACTGTTGATCTATATCAAAAGAAAGTGATAGATTTTTGAAAATGGTGCAGTTTATGGTGTTTGCGTGCTCAGACTCCCGTGTGTGTCCCTCGCACGTACTAGATTTCCAGCCCGGTGAGGCTTTCATGGTTCGCAACATCGCCAACATGGTGCCAGTGTTTGACAAGGTATTGTTCAAATGTTTAACACCAACTTTAAATAAATTTACTACTCGTAAATAGTGAAAACATGGACGTAAAATGAAAACAAAAAAACGAGTTAAGTATGTTTTCCGGGCAGAAGTTTTGGAGTATGATGATTTCTTGTTGATGATATTATATATCTTGTACACAGGACAAATACGCTGGAGTCGGAGCAGCCATTGAATACGCAGTGTTGCACCTTAAGGTGAGTAGAAACGACCCAGTTCGTCATCTTTATACACATTGAAACGACTCTAATTATACACATTGAAACGACTCTAATTACACATTGAAACGACTTTAATTGTAACAATGTTGTTGCCAAAGGTGGAGAACATTGTCGTGATTGGACACAGTGCTTGTGGTGGAATCAAGGGGCTTATGTCTTTCCCAGATGCAGGACCAACCACAACGTAAGTTAATCATATACTACTAATTTTGTTAATACCGTTTATTTCCGAAGCTTATTTAGATAATTAATCCAAGTAATATGTACGTACGTAGTAGGTGATTAACGAAAAATATTTACAATTTGGCTAGTGATTTTATTGAGGATTGGGTCAAAATCTGCTTGCCTGCCAAGCACAAGGTGTTAGCCGAGCATGGTAATGCAACTTTCGCTGAACAATGCACCCATTGTGAAAAGGTTAGGTCTTTCTTCTTCTTTCTCATCATATTACGGCTTAAGTTTATGTCAAAGGATCAACTCAACCAAAAGCTTAAGCTGATGGTTGAATCCTCAATATTAGTTTTATACTCTATCACGCCGCCTCACATGAAAGCCATTTGGGCTTGAAGTGTGGATGCAATATAGGCATCCTTATACCCGGCGCGAAATATTCCACTTTGAAATGAGGGGTGGATGAGATACCATGTCAAATGACCAATTCAACCAAAAGCTTAAGCTGATGGTTGAAGACCCAAGATTAGTTTTATACTCTATCAGTTTATTATCCGTATTGAACTACTCTGTACTAATGCATGCTTGACTTATTATATATATGTACCTCAATTTCAGGAAGCTGTGAATGTATCTCTTGGAAACTTGTTGACTTACCCATTTGTAAGAGATGGTTTGGTGAAGAAGACTCTAGCTTTGCAGGGTGGTTACTACGATTTTGTCAATGGATCATTCGAGCTATGGGGACTCGAATTCGGCCTCTCTCCTTCCCAATCTGTATGAATGTCTACTATTAACGGCTGCCTCACCTCTATCTCTCCTTCCCGTACTCAATTGAAAAATACCTCCACTTTAAGGCCAACTTTCATTGCTAACAGCAGGGTTAACCCTTCTTCTTCTGTTCCTCCTTCCCTTATTAGAAACCAGCCCGTTTTCGCCGCCCCCGCCCCTATCATCACCCCTACTTTGAAAGAAGATATGGCATACGAAGAAGCCATCGCTGCCCTTAAGAAGCTTCTAAGCGAGAAGGGAGAACTTGAAAATGAAGCCGCATCAAAGGTGGCACAGATAACATCTGAGTTAGCCGACGGTGGCACACCATCCGCCAGTTACCCGGTTCAGAGAATTAAGGAAGGGTTTATCAAATTCAAGAAGGAGAAATACGAGAAAAATCCAGCATTGTATGGTGAGCTTTCTAAGGGCCAAGCTCCCAAGTTTATGGTGTTTGCGTGCTCAGACTCCCGTGTGTGTCCCTCGCACGTACTAGATTTCCAGCCCGGTGAGGCTTTCATGGTTCGCAACATCGCCAACATGGTGCCAGTGTTTGACAAGGACAAATACGCTGGAGTCGGAGCAGCCATTGAATACGCAGTGTTGCACCTTAAGGTGGAGAACATTGTCGTGATTGGACACAGTGCTTGTGGTGGAATCAAGGGGCTTATGTCTTTCCCAGATGCAGGACCAACCACAACTGATTTTATTGAGGATTGGGTCAAAATCTGCTTGCCTGCCAAGCACAAGGTGTTAGCCGAGCATGGTAATGCAACTTTCGCTGAACAATGCACCCATTGTGAAAAGGAAGCTGTGAATGTATCTCTTGGAAACTTGTTGACTTACCCATTTGTAAGAGATGGTTTGGTGAAGAAGACTCTAGCTTTGCAGGGTGGTTACTACGATTTTGTCAATGGATCATTCGAGCTATGGGGACTCGAATTCGGCCTCTCTCCTTCCCAATCTGTATGA ATGTCTACTATTAACGGCTGCCTCACCTCTATCTCTCCTTCCCGTACTCAATTGAAAAATACCTCCACTTTAAGGCCAACTTTCATTGCTAACAGCAGGGTTAACCCTTCTTCTTCTGTTCCTCCTTCCCTTATTAGAAACCAGCCCGTTTTCGCCGCCCCCGCCCCTATCATCACCCCTACTTTGAAAGAAGATATGGCATACGAAGAAGCCATCGCTGCCCTTAAGAAGCTTCTAAGCGAGAAGGGAGAACTTGAAAATGAAGCCGCATCAAAGGTGGCACAGATAACATCTGAGTTAGCCGACGGTGGCACACCATCCGCCAGTTACCCGGTTCAGAGAATTAAGGAAGGGTTTATCAAATTCAAGAAGGAGAAATACGAGAAAAATCCAGCATTGTATGGTGAGCTTTCTAAGGGCCAAGCTCCCAAGTTTATGGTGTTTGCGTGCTCAGACTCCCGTGTGTGTCCCTCGCACGTACTAGATTTCCAGCCCGGTGAGGCTTTCATGGTTCGCAACATCGCCAACATGGTGCCAGTGTTTGACAAGGACAAATACGCTGGAGTCGGAGCAGCCATTGAATACGCAGTGTTGCACCTTAAGGTGGAGAACATTGTCGTGATTGGACACAGTGCTTGTGGTGGAATCAAGGGGCTTATGTCTTTCCCAGATGCAGGACCAACCACAACTGATTTTATTGAGGATTGGGTCAAAATCTGCTTGCCTGCCAAGCACAAGGTGTTAGCCGAGCATGGTAATGCAACTTTCGCTGAACAATGCACCCATTGTGAAAAGGAAGCTGTGAATGTATCTCTTGGAAACTTGTTGACTTACCCATTTGTAAGAGATGGTTTGGTGAAGAAGACTCTAGCTTTGCAGGGTGGTTACTACGATTTTGTCAATGGATCATTCGAGCTATGGGGACTCGAATTCGGCCTCTCTCCTTCCCAATCTGTATGA MSTINGCLTSISPSRTQLKNTSTLRPTFIANSRVNPSSSVPPSLIRNQPVFAAPAPIITPTLKEDMAYEEAIAALKKLLSEKGELENEAASKVAQITSELADGGTPSASYPVQRIKEGFIKFKKEKYEKNPALYGELSKGQAPKFMVFACSDSRVCPSHVLDFQPGEAFMVRNIANMVPVFDKDKYAGVGAAIEYAVLHLKVENIVVIGHSACGGIKGLMSFPDAGPTTTDFIEDWVKICLPAKHKVLAEHGNATFAEQCTHCEKEAVNVSLGNLLTYPFVRDGLVKKTLALQGGYYDFVNGSFELWGLEFGLSPSQSV Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo04690.1 vs. NCBI nr
Match: gi|115472|sp|P16016.2|CAHC_SPIOL (RecName: Full=Carbonic anhydrase, chloroplastic; AltName: Full=Carbonate dehydratase; Flags: Precursor) HSP 1 Score: 637.5 bits (1643), Expect = 1.300e-179 Identity = 318/319 (99.69%), Postives = 319/319 (100.00%), Query Frame = 1
BLAST of Spo04690.1 vs. NCBI nr
Match: gi|731353311|ref|XP_010687996.1| (PREDICTED: carbonic anhydrase, chloroplastic-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 524.6 bits (1350), Expect = 1.200e-145 Identity = 262/320 (81.88%), Postives = 291/320 (90.94%), Query Frame = 1
BLAST of Spo04690.1 vs. NCBI nr
Match: gi|870850801|gb|KMT02867.1| (hypothetical protein BVRB_8g194450 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 524.6 bits (1350), Expect = 1.200e-145 Identity = 262/320 (81.88%), Postives = 291/320 (90.94%), Query Frame = 1
BLAST of Spo04690.1 vs. NCBI nr
Match: gi|227613|prf||1707317A (carbonic anhydrase) HSP 1 Score: 518.1 bits (1333), Expect = 1.100e-143 Identity = 254/254 (100.00%), Postives = 254/254 (100.00%), Query Frame = 1
BLAST of Spo04690.1 vs. NCBI nr
Match: gi|170102|gb|AAA34026.1| (carbonic anhydrase precursor [Spinacia oleracea]) HSP 1 Score: 515.0 bits (1325), Expect = 9.400e-143 Identity = 253/254 (99.61%), Postives = 253/254 (99.61%), Query Frame = 1
BLAST of Spo04690.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BNK6_BETVU (Carbonic anhydrase OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g194450 PE=3 SV=1) HSP 1 Score: 524.6 bits (1350), Expect = 8.200e-146 Identity = 262/320 (81.88%), Postives = 291/320 (90.94%), Query Frame = 1
BLAST of Spo04690.1 vs. UniProtKB/TrEMBL
Match: G9FZ35_MESNO (Carbonic anhydrase OS=Mesembryanthemum nodiflorum GN=CA1 PE=2 SV=1) HSP 1 Score: 491.1 bits (1263), Expect = 1.000e-135 Identity = 252/326 (77.30%), Postives = 292/326 (89.57%), Query Frame = 1
BLAST of Spo04690.1 vs. UniProtKB/TrEMBL
Match: A0A067LLS5_JATCU (Carbonic anhydrase OS=Jatropha curcas GN=JCGZ_09588 PE=3 SV=1) HSP 1 Score: 463.8 bits (1192), Expect = 1.700e-127 Identity = 241/323 (74.61%), Postives = 272/323 (84.21%), Query Frame = 1
BLAST of Spo04690.1 vs. UniProtKB/TrEMBL
Match: A1XX45_9MAGN (Carbonic anhydrase OS=Pachysandra terminalis PE=2 SV=1) HSP 1 Score: 449.5 bits (1155), Expect = 3.400e-123 Identity = 234/325 (72.00%), Postives = 269/325 (82.77%), Query Frame = 1
BLAST of Spo04690.1 vs. UniProtKB/TrEMBL
Match: A0A067FRX3_CITSI (Carbonic anhydrase OS=Citrus sinensis GN=CISIN_1g019915mg PE=3 SV=1) HSP 1 Score: 449.1 bits (1154), Expect = 4.400e-123 Identity = 229/318 (72.01%), Postives = 264/318 (83.02%), Query Frame = 1
BLAST of Spo04690.1 vs. ExPASy Swiss-Prot
Match: CAHC_SPIOL (Carbonic anhydrase, chloroplastic OS=Spinacia oleracea PE=1 SV=2) HSP 1 Score: 637.5 bits (1643), Expect = 7.800e-182 Identity = 318/319 (99.69%), Postives = 319/319 (100.00%), Query Frame = 1
BLAST of Spo04690.1 vs. ExPASy Swiss-Prot
Match: CAHC_TOBAC (Carbonic anhydrase, chloroplastic OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 442.6 bits (1137), Expect = 3.700e-123 Identity = 232/321 (72.27%), Postives = 261/321 (81.31%), Query Frame = 1
BLAST of Spo04690.1 vs. ExPASy Swiss-Prot
Match: CAH1_FLALI (Carbonic anhydrase 1 OS=Flaveria linearis PE=2 SV=1) HSP 1 Score: 431.0 bits (1107), Expect = 1.100e-119 Identity = 215/313 (68.69%), Postives = 248/313 (79.23%), Query Frame = 1
BLAST of Spo04690.1 vs. ExPASy Swiss-Prot
Match: CAHX_FLABR (Carbonic anhydrase OS=Flaveria brownii PE=2 SV=1) HSP 1 Score: 429.9 bits (1104), Expect = 2.500e-119 Identity = 215/313 (68.69%), Postives = 248/313 (79.23%), Query Frame = 1
BLAST of Spo04690.1 vs. ExPASy Swiss-Prot
Match: BCA1_ARATH (Beta carbonic anhydrase 1, chloroplastic OS=Arabidopsis thaliana GN=BCA1 PE=1 SV=2) HSP 1 Score: 429.5 bits (1103), Expect = 3.200e-119 Identity = 226/326 (69.33%), Postives = 260/326 (79.75%), Query Frame = 1
BLAST of Spo04690.1 vs. TAIR (Arabidopsis)
Match: AT3G01500.2 (carbonic anhydrase 1) HSP 1 Score: 429.5 bits (1103), Expect = 1.800e-120 Identity = 226/326 (69.33%), Postives = 260/326 (79.75%), Query Frame = 1
BLAST of Spo04690.1 vs. TAIR (Arabidopsis)
Match: AT5G14740.1 (carbonic anhydrase 2) HSP 1 Score: 391.7 bits (1005), Expect = 4.200e-109 Identity = 194/255 (76.08%), Postives = 222/255 (87.06%), Query Frame = 1
BLAST of Spo04690.1 vs. TAIR (Arabidopsis)
Match: AT1G70410.2 (beta carbonic anhydrase 4) HSP 1 Score: 317.0 bits (811), Expect = 1.300e-86 Identity = 157/258 (60.85%), Postives = 202/258 (78.29%), Query Frame = 1
BLAST of Spo04690.1 vs. TAIR (Arabidopsis)
Match: AT1G23730.1 (beta carbonic anhydrase 3) HSP 1 Score: 302.4 bits (773), Expect = 3.400e-82 Identity = 144/251 (57.37%), Postives = 193/251 (76.89%), Query Frame = 1
BLAST of Spo04690.1 vs. TAIR (Arabidopsis)
Match: AT4G33580.2 (beta carbonic anhydrase 5) HSP 1 Score: 184.5 bits (467), Expect = 1.000e-46 Identity = 114/293 (38.91%), Postives = 166/293 (56.66%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo04690.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo04690.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo04690.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo04690.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
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