Spo04647 (gene)

Overview
NameSpo04647
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
LocationSpoScf_01052 : 164156 .. 164855 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACTGACAATTTTACCCCTGTGATGATCCAAGCAATCCAAAATCACAGTTATAAAACCTCCTTCCTCCCTCCCTTGAACGCTAAAACCAAATCCCTCTCTTCTTTCTCTCTCCAACTCGATCTCCATCTTTCTCTCTCCTCTTCATGCATCTGTCATCTCCGTCGCCAACTCCGCCGTATCCTCCTTCGTCATCGTCTCCGCGCAACCGCTTCAACAACCATCCAGGCAGGCGTCTCCTCCCACTCGCCACCCTCTTTCACTCGAATTTGAACTCGGACTCGAACACTAGAGCTAAATCTCCACAAGGTGAGGATATTTTTTTTTTTATCTTCGATTAGAATTTCGAATAGAATCCAGATCTATGTTCTCACGATTATTAGGTGTTTAAACTCGAATTTGATTTTAGGTTAATTTGTTGCTCTTCAGATTTTAGGTTTCGGAATTAGGTTTTTTCAATGTAATATAGCTTTCCTTACCGTAAGTGATGATTGATTGTTAGTCATACACTCCTCATTTACTCCATTGATGATTGTTTAGTTTTCTCAGTGCCTCAGCTTGAAGTTTCTAGGTACTGAACAACAATGCCATTGTGCCCTGAGTTTGCTGGATATAACTTTGGAGACTGCTTTTTTCTTGACTGATAATATTTTATGTATAGGACAGCCAATACACTTATCCGGTAGCGCGAATGTTTAG

mRNA sequence

ATGAACTGACAATTTTACCCCTGTGATGATCCAAGCAATCCAAAATCACAGTTATAAAACCTCCTTCCTCCCTCCCTTGAACGCTAAAACCAAATCCCTCTCTTCTTTCTCTCTCCAACTCGATCTCCATCTTTCTCTCTCCTCTTCATGCATCTGTCATCTCCGTCGCCAACTCCGCCGTATCCTCCTTCGTCATCGTCTCCGCGCAACCGCTTCAACAACCATCCAGGCAGGCGTCTCCTCCCACTCGCCACCCTCTTTCACTCGAATTTGAACTCGGACTCGAACACTAGAGCTAAATCTCCACAAGGACAGCCAATACACTTATCCGGTAGCGCGAATGTTTAG

Coding sequence (CDS)

ATGCATCTGTCATCTCCGTCGCCAACTCCGCCGTATCCTCCTTCGTCATCGTCTCCGCGCAACCGCTTCAACAACCATCCAGGCAGGCGTCTCCTCCCACTCGCCACCCTCTTTCACTCGAATTTGAACTCGGACTCGAACACTAGAGCTAAATCTCCACAAGGACAGCCAATACACTTATCCGGTAGCGCGAATGTTTAG

Protein sequence

MHLSSPSPTPPYPPSSSSPRNRFNNHPGRRLLPLATLFHSNLNSDSNTRAKSPQGQPIHLSGSANV
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo04647.1Spo04647.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo04647.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo04647.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo04647.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo04647.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo182190.70Barchart | Table
Spo270640.70Barchart | Table
Spo161390.66Barchart | Table
Spo147770.65Barchart | Table