Spo04554 (gene)

Overview
NameSpo04554
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
Locationchr3 : 50539131 .. 50541853 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TTGTATGTAAAGTTTCAATGCATTTGTAACCAATTAAAATTTAATATTAAAAGGGTTATCAACCCTTAGGATCACTCTATCATTATCCCAATAATTTATGTGTTTTTGACTTCACAATCACATGAACTCCCCCTTAAACCAACCAACCCTCCACTAATTCACCATTTTCTCTCTCCTCACCCACCCAAACACTAGCTACCTTTTCCCCCTTTTGTCTTCACATCCCACCATTTTTAGTCCAAATTTTTTTCTGGGATTTGAAGGAAAATAATGTTTGATTTGGGAGATGATATAATTCTGGACAACAACAACATTCCATGGCTAATTTGGATTCAGATTTTGGTCATGTTTTTGCTAACCCTCACCATTTTGCTCTCTTACTTTGGTTACTTTGTTCTTGATTCTTCTTCTACAAGCAGTTCTTCTGTTTCGAAGACTTCTTCTAGCTGCAATCCAAGTGCCCAGGTGTGGATTTCATCTGCATTCTTTGTTTTCTTGTTCTGGGTTTCTCTCCTTGTTGATTTTTTTTATTAGTTTTTGAAATTGAGAATTTATATATGCTTAATTATGCTGATTTTAATGGGTTTTCATGATTGATTTTTAAGTCCCGAGCTTGAACGAATTAGTTAATTTAATTAGGTGAGAACAAATGAACAAGCAGGGTATTTTCCGTTTTGATTCATCAATCTTAAAAACCAGCAAAGTTGGGCTATAGTTTGACTTGTGATTGAGGCTAATTACTGACCCATTCTCCATAATAGTCTGAATTGAGTGTTTGTAGAATGTTGGTATTTGTTGGGGAACGGGAGAAAAGTGGAGATAAACTTATAAATTGACTAATCTTCCACCATCATAAGGTTGTTGCTGTGTTAATGAGGGTTTCGTTTTCGTGATCTTAATGGAACAATGGTAAAATCTGGACCATCTGGTTGATAAGGTGGTTTGTCGGTTCTTCTGGATTTGTAAGATAAAAAAAACTTTCTTAAGCAAATTTTGTGTGTTGATTTAGAGTGAATAAGATATAATCTCAGGTTGCTCATATGATATTGTTGTAAATAGAGTGGATAAGATTCAATATGATCTCAATATAATCCTGACATTTAATTATCTGAAGCCGTCTGTTTCCTTCTTTTGGTCCCCTTAGTTATACGAAATACTCCGTATGTCTTAAAGTATATGGAGTAAGGGGTAACTTATAGTAGAATTTATAGAACTGATAGAAAAGGATGGAAAGAAATCTGAGAGCCTGGAAAGTTGTTTTTGGCACTTTGTCCATTATGTACACTGTCAAATACGAGAAGTCGAGAACCGCCTTATCAGGTTGGCAAATTAAGTCTTGCTTCACACAATCACACTGGAGATAAATAAAACTTGGCCAACCTAATCTTGAAAGTGATCCTCTTAGCTGTCTTTCAAACAACGAGCACATTAGTGTTTCCATTAGGCTCTTTCATGTGAATTTGTGGACATGTTTTCTATGAAGCCAAATCCTACCACTTCAACTTTGCTACAGTGATGAATATACTTGTTAAAGTTTCCCGGAGGTATCTACAATTTGACTTACAATTGATTGGAAAATCTAGAGCCTCTTTGCAATTGCGTGGATAAGCCCGTGTGGAAATAAATAACAATCTTCCTTACTCTGCCCTGGTTGGCAGCTTTTGTAGAGGTGTTGGGATAACTAGATGATCTAAAATTTCCTGTTTGTCAACCGGAAAAAAAAGAGAAGAGAAAGGACAGATAATCTGATACTCAGGTTGGATTTTAAACTGGAAGTGATTATCGTGAAACAAGTTTGGGAAACTATATGGGTGAAAGAGAGCATATTCTATCTGGCAGACTGAATTAGAGCAACTCCAATGGTTGCTTCTAGGGACTTGATTGCAATTTCCAAAACTTTCAAGCAAGTAGCTAAACCATTGGAGCAGTTTTGTTAAATTAGCTAGACAAAGCAAATTAGCTCTACCAAGCTAATTAGCTTGGAAAAAAACAACTTTTTTTTCTAATTATTAAGAATGTAAACGTAAGAATAGAATAAAAAAAATTAAAAAAAAGAAGTTAAACAAAAATCAAGCTACTTGCTAACCATTGGAGCATGTTATAGCTAGAAAATGTTGTTGCTTGAAAAATTAATGTGGCATACCAAGCTACAATGATATTAGCTAACCATTAAAGATGCTCTTAGAGTAATAAGTCGACATGTTCTAGAAGTTGGTTGAGTAACTGATAATACATCCATTTGATCCATACATCTAAAAAGTTAGTGCTCTGTACTGATATTTCGCCAAACAAATTGTATAGTCCCACTATGAAGGTTGATTGGGAAGGGAAAATACAAGCTTCATTAATTTAATTTATAAAAGTCATAAATTAATAATCAACATAATTTCCTTGTTGGTTCAGATATCTGAATCTATGTAAATTTGATTGGAACTGATATTACATACTTGAATACAAGGGTGCATGTATTAAACAATTAGTTATATTAGCAGGTAGCTGATAACCATGATGCGAGGAGGGAAATAACTACTACGACATCTAGCAACAGAGTGAGGTGTGTAGGGGAAAGGGATGGCTCTTCCATGAAGGATGTAGCTTCTTCCTCAGTTGCAGCACGTTTCTTCCACCCATGCCGTTATTTTGATTTTGCTAAAGAAGCTTTCCTCAAATGTCTAGGTTTGGATTCAGAATCTCCTGACGAAGAACACAAACATGAAGACTGA

mRNA sequence

TTGTATGTAAAGTTTCAATGCATTTGTAACCAATTAAAATTTAATATTAAAAGGGTTATCAACCCTTAGGATCACTCTATCATTATCCCAATAATTTATGTGTTTTTGACTTCACAATCACATGAACTCCCCCTTAAACCAACCAACCCTCCACTAATTCACCATTTTCTCTCTCCTCACCCACCCAAACACTAGCTACCTTTTCCCCCTTTTGTCTTCACATCCCACCATTTTTAGTCCAAATTTTTTTCTGGGATTTGAAGGAAAATAATGTTTGATTTGGGAGATGATATAATTCTGGACAACAACAACATTCCATGGCTAATTTGGATTCAGATTTTGGTCATGTTTTTGCTAACCCTCACCATTTTGCTCTCTTACTTTGGTTACTTTGTTCTTGATTCTTCTTCTACAAGCAGTTCTTCTGTTTCGAAGACTTCTTCTAGCTGCAATCCAAGTGCCCAGGTAGCTGATAACCATGATGCGAGGAGGGAAATAACTACTACGACATCTAGCAACAGAGTGAGGTGTGTAGGGGAAAGGGATGGCTCTTCCATGAAGGATGTAGCTTCTTCCTCAGTTGCAGCACGTTTCTTCCACCCATGCCGTTATTTTGATTTTGCTAAAGAAGCTTTCCTCAAATGTCTAGGTTTGGATTCAGAATCTCCTGACGAAGAACACAAACATGAAGACTGA

Coding sequence (CDS)

ATGTTTGATTTGGGAGATGATATAATTCTGGACAACAACAACATTCCATGGCTAATTTGGATTCAGATTTTGGTCATGTTTTTGCTAACCCTCACCATTTTGCTCTCTTACTTTGGTTACTTTGTTCTTGATTCTTCTTCTACAAGCAGTTCTTCTGTTTCGAAGACTTCTTCTAGCTGCAATCCAAGTGCCCAGGTAGCTGATAACCATGATGCGAGGAGGGAAATAACTACTACGACATCTAGCAACAGAGTGAGGTGTGTAGGGGAAAGGGATGGCTCTTCCATGAAGGATGTAGCTTCTTCCTCAGTTGCAGCACGTTTCTTCCACCCATGCCGTTATTTTGATTTTGCTAAAGAAGCTTTCCTCAAATGTCTAGGTTTGGATTCAGAATCTCCTGACGAAGAACACAAACATGAAGACTGA

Protein sequence

MFDLGDDIILDNNNIPWLIWIQILVMFLLTLTILLSYFGYFVLDSSSTSSSSVSKTSSSCNPSAQVADNHDARREITTTTSSNRVRCVGERDGSSMKDVASSSVAARFFHPCRYFDFAKEAFLKCLGLDSESPDEEHKHED
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo04554.1Spo04554.1mRNA


Homology
BLAST of Spo04554.1 vs. NCBI nr
Match: gi|902202920|gb|KNA14421.1| (hypothetical protein SOVF_107560 [Spinacia oleracea])

HSP 1 Score: 271.2 bits (692), Expect = 1.000e-69
Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 1

		  

Query: 1   MFDLGDDIILDNNNIPWLIWIQILVMFLLTLTILLSYFGYFVLDSSSTSSSSVSKTSSSC 60
           MFDLGDDIILDNNNIPWLIWIQILVMFLLTLTILLSYFGYFVLDSSSTSSSSVSKTSSSC
Sbjct: 1   MFDLGDDIILDNNNIPWLIWIQILVMFLLTLTILLSYFGYFVLDSSSTSSSSVSKTSSSC 60

Query: 61  NPSAQVADNHDARREITTTTSSNRVRCVGERDGSSMKDVASSSVAARFFHPCRYFDFAKE 120
           NPSAQVADNHDARREITTTTSSNRVRCVGERDGSSMKDVASSSVAARFFHPCRYFDFAKE
Sbjct: 61  NPSAQVADNHDARREITTTTSSNRVRCVGERDGSSMKDVASSSVAARFFHPCRYFDFAKE 120

Query: 121 AFLKCLGLDSESPDEEHKHED 142
           AFLKCLGLDSESPDEEHKHED
Sbjct: 121 AFLKCLGLDSESPDEEHKHED 141

BLAST of Spo04554.1 vs. NCBI nr
Match: gi|731339873|ref|XP_010681092.1| (PREDICTED: uncharacterized protein LOC104896089 isoform X2 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 153.3 bits (386), Expect = 3.200e-34
Identity = 91/146 (62.33%), Postives = 106/146 (72.60%), Query Frame = 1

		  

Query: 7   DIILDNNNIPWLIWIQILVMFLLTLTILLSYFGYFVLDSSSTSSSSVS-----KTSSSCN 66
           DIILDN  IPWLIWIQI +MFLLTL IL  YFG+ VLDSS T++S  +     K S SC+
Sbjct: 3   DIILDNFRIPWLIWIQIFIMFLLTLIILFCYFGFIVLDSSLTTNSHTTISPNLKISHSCS 62

Query: 67  PSAQVADNHDARREITTTTSSNRVRCV---GERDGSSMKDVASSSVAARFFHPCRYFDFA 126
           PS Q   NHDAR EI TT +SNR+R +    ERDGSS+KD+A S VA RFFHPCRY D A
Sbjct: 63  PSTQATVNHDAREEIATT-ASNRLRRLENNSERDGSSIKDIAPSPVAERFFHPCRYLDLA 122

Query: 127 KEAFLKCLGLDSES---PDEEHKHED 142
           ++AFLKCLGL S S    D+EH+HED
Sbjct: 123 RQAFLKCLGLGSGSHNCNDKEHEHED 147

BLAST of Spo04554.1 vs. NCBI nr
Match: gi|731339871|ref|XP_010681091.1| (PREDICTED: uncharacterized protein LOC104896089 isoform X1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 144.4 bits (363), Expect = 1.500e-31
Identity = 92/162 (56.79%), Postives = 107/162 (66.05%), Query Frame = 1

		  

Query: 7   DIILDNNNIPWLIWIQILVMFLLTLTILLSYFGYFVLDSSSTSSSSVS-----KTSSSCN 66
           DIILDN  IPWLIWIQI +MFLLTL IL  YFG+ VLDSS T++S  +     K S SC+
Sbjct: 3   DIILDNFRIPWLIWIQIFIMFLLTLIILFCYFGFIVLDSSLTTNSHTTISPNLKISHSCS 62

Query: 67  PSAQV----------------ADNHDARREITTTTSSNRVRCV---GERDGSSMKDVASS 126
           PS QV                  NHDAR EI TT +SNR+R +    ERDGSS+KD+A S
Sbjct: 63  PSTQVRISPAFFVSSSPSTQATVNHDAREEIATT-ASNRLRRLENNSERDGSSIKDIAPS 122

Query: 127 SVAARFFHPCRYFDFAKEAFLKCLGLDSES---PDEEHKHED 142
            VA RFFHPCRY D A++AFLKCLGL S S    D+EH+HED
Sbjct: 123 PVAERFFHPCRYLDLARQAFLKCLGLGSGSHNCNDKEHEHED 163

BLAST of Spo04554.1 vs. NCBI nr
Match: gi|870857082|gb|KMT08658.1| (hypothetical protein BVRB_6g139350 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 114.8 bits (286), Expect = 1.200e-22
Identity = 77/143 (53.85%), Postives = 91/143 (63.64%), Query Frame = 1

		  

Query: 26  MFLLTLTILLSYFGYFVLDSSSTSSSSVS-----KTSSSCNPSAQV-------------- 85
           MFLLTL IL  YFG+ VLDSS T++S  +     K S SC+PS QV              
Sbjct: 1   MFLLTLIILFCYFGFIVLDSSLTTNSHTTISPNLKISHSCSPSTQVRISPAFFVSSSPST 60

Query: 86  --ADNHDARREITTTTSSNRVRCV---GERDGSSMKDVASSSVAARFFHPCRYFDFAKEA 142
               NHDAR EI TT +SNR+R +    ERDGSS+KD+A S VA RFFHPCRY D A++A
Sbjct: 61  QATVNHDAREEIATT-ASNRLRRLENNSERDGSSIKDIAPSPVAERFFHPCRYLDLARQA 120

BLAST of Spo04554.1 vs. NCBI nr
Match: gi|970023133|ref|XP_015072902.1| (PREDICTED: uncharacterized protein LOC107017144 [Solanum pennellii])

HSP 1 Score: 89.7 bits (221), Expect = 4.300e-15
Identity = 63/150 (42.00%), Postives = 84/150 (56.00%), Query Frame = 1

		  

Query: 1   MFDLGDDIILDNNNIPWLIWIQILVMFLLTLTILLSYFGYFVLDSSSTSSSSVSKTSSSC 60
           M++ GD++I+D+  IPWLIWIQ++VM LL   +LL +FG+  LD S+ S+S  S   SS 
Sbjct: 1   MYEFGDEVIIDSFKIPWLIWIQLVVMILL---VLLLFFGFSFLDLSNNSTSGTSSQGSSL 60

Query: 61  NPSAQVADNH-----DARREITTTTSSN-RVRCVGERDGSSMKDVASSSVAARFFHPCRY 120
             +A     H      A+ E   +TS   R     ER+GS+ KD A      R  HPC Y
Sbjct: 61  PSNAITILQHRNLNQHAKGENEASTSREIRADESQEREGSAEKDTAIFKCCVRTEHPCNY 120

Query: 121 FDFAKEAFLKCLGLDSESPD---EEHKHED 142
           F  AK+AFLKCLG DS+  +     H  ED
Sbjct: 121 FGLAKQAFLKCLGFDSDRDNCNTRRHAKED 147

BLAST of Spo04554.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R4J4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_107560 PE=4 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 7.300e-70
Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 1

		  

Query: 1   MFDLGDDIILDNNNIPWLIWIQILVMFLLTLTILLSYFGYFVLDSSSTSSSSVSKTSSSC 60
           MFDLGDDIILDNNNIPWLIWIQILVMFLLTLTILLSYFGYFVLDSSSTSSSSVSKTSSSC
Sbjct: 1   MFDLGDDIILDNNNIPWLIWIQILVMFLLTLTILLSYFGYFVLDSSSTSSSSVSKTSSSC 60

Query: 61  NPSAQVADNHDARREITTTTSSNRVRCVGERDGSSMKDVASSSVAARFFHPCRYFDFAKE 120
           NPSAQVADNHDARREITTTTSSNRVRCVGERDGSSMKDVASSSVAARFFHPCRYFDFAKE
Sbjct: 61  NPSAQVADNHDARREITTTTSSNRVRCVGERDGSSMKDVASSSVAARFFHPCRYFDFAKE 120

Query: 121 AFLKCLGLDSESPDEEHKHED 142
           AFLKCLGLDSESPDEEHKHED
Sbjct: 121 AFLKCLGLDSESPDEEHKHED 141

BLAST of Spo04554.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C9I6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g139350 PE=4 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 8.700e-23
Identity = 77/143 (53.85%), Postives = 91/143 (63.64%), Query Frame = 1

		  

Query: 26  MFLLTLTILLSYFGYFVLDSSSTSSSSVS-----KTSSSCNPSAQV-------------- 85
           MFLLTL IL  YFG+ VLDSS T++S  +     K S SC+PS QV              
Sbjct: 1   MFLLTLIILFCYFGFIVLDSSLTTNSHTTISPNLKISHSCSPSTQVRISPAFFVSSSPST 60

Query: 86  --ADNHDARREITTTTSSNRVRCV---GERDGSSMKDVASSSVAARFFHPCRYFDFAKEA 142
               NHDAR EI TT +SNR+R +    ERDGSS+KD+A S VA RFFHPCRY D A++A
Sbjct: 61  QATVNHDAREEIATT-ASNRLRRLENNSERDGSSIKDIAPSPVAERFFHPCRYLDLARQA 120

BLAST of Spo04554.1 vs. UniProtKB/TrEMBL
Match: A0A0V0HHU3_SOLCH (Putative ovule protein OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 2.100e-13
Identity = 59/142 (41.55%), Postives = 79/142 (55.63%), Query Frame = 1

		  

Query: 1   MFDLGDDIILDNNNIPWLIWIQILVMFLLTLTILLSYFGYFVLDSS--STSSSSVSKTSS 60
           M++ GD++I+++  IPWL+WIQ +VM LL   +LL +FG+ VLD S  STS   V  +S 
Sbjct: 1   MYEFGDELIIESFKIPWLMWIQFVVMILL---VLLLFFGFSVLDLSNNSTSQGPVGSSSH 60

Query: 61  SCNPSAQVAD------NHDARREITTTTSSNRVRCVGE---RDGSSMKDVASSSVAARFF 120
              PS  +        N   + E   TTS   +R   E   R+GS+ KD        R  
Sbjct: 61  VNLPSNSIRILQHRNLNQHTKGENEATTS-REIRAADESQVREGSAEKDATIFKFCVRTE 120

Query: 121 HPCRYFDFAKEAFLKCLGLDSE 132
           HPC YF  AK+AFLKCLG DS+
Sbjct: 121 HPCNYFGLAKQAFLKCLGFDSD 138

BLAST of Spo04554.1 vs. UniProtKB/TrEMBL
Match: A0A0B0N2S6_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_32447 PE=4 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 6.300e-13
Identity = 62/143 (43.36%), Postives = 79/143 (55.24%), Query Frame = 1

		  

Query: 1   MFDLGDDIILDNNNIPWLIWIQILVMFLLTLTILLSYFGYFVLDSSSTSSSSVSKTSSS- 60
           M+DLGD++ +++  IPWLIWIQI+V+ LL L  LL  F  F  D   TSSSS S +  S 
Sbjct: 1   MYDLGDEVTIESYRIPWLIWIQIIVLLLLML--LLYGFTLFAFDLPETSSSSSSSSPDSQ 60

Query: 61  ----------CNPSAQVADNHDARREI-TTTTSSNRVRCVGERDGSSMKDVASSSVAARF 120
                        S+QV +    R EI  T T+S R+    E +GSS K+     +    
Sbjct: 61  LGKLPGFKQTTTFSSQVIERQSIRGEIGITKTTSRRMVRGEEMEGSSRKEPNQQELD--- 120

Query: 121 FHPCRYFDFAKEAFLKCLGLDSE 132
            HPC YF  AK AFLKCLGLDS+
Sbjct: 121 LHPCHYFRLAKLAFLKCLGLDSD 138

BLAST of Spo04554.1 vs. UniProtKB/TrEMBL
Match: M1AZK3_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400012958 PE=4 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 8.200e-13
Identity = 55/141 (39.01%), Postives = 81/141 (57.45%), Query Frame = 1

		  

Query: 1   MFDLGDDIILDNNNIPWLIWIQILVMFLLTLTILLSYFGYFVLDSSSTSSSSVSKTSSSC 60
           M++ GD++I++   IPWLIWIQ++VM LL   +LL +FG+ VLD S+ S+S     SSS 
Sbjct: 1   MYEFGDELIIEGFKIPWLIWIQLVVMILL---VLLLFFGFSVLDLSNNSTSQGPVGSSSH 60

Query: 61  ----NPSAQVADNHDARREI---TTTTSSNRVRCVGE---RDGSSMKDVASSSVAARFFH 120
               + S ++  + +  +        ++S  +R   E   R+GS+ KD        R  H
Sbjct: 61  VNLPSNSIRILQHRNLNQHTKGKNEASTSCEIRAADESQVREGSAEKDATIFKFCVRTEH 120

Query: 121 PCRYFDFAKEAFLKCLGLDSE 132
           PC YF  AK+AFLKCLG DS+
Sbjct: 121 PCNYFGLAKQAFLKCLGFDSD 138

BLAST of Spo04554.1 vs. TAIR (Arabidopsis)
Match: AT5G64880.1 (unknown protein)

HSP 1 Score: 63.5 bits (153), Expect = 1.200e-10
Identity = 58/165 (35.15%), Postives = 79/165 (47.88%), Query Frame = 1

		  

Query: 1   MFDLGDD-IILDN-NNIPWLIWIQILVMFLLTLTI-LLSYFGYFVLDSS--------STS 60
           M D G + ++LD+ NNIPWLIWIQ+LV  LL L + ++  F + ++D+S        STS
Sbjct: 1   MVDSGKEFLVLDSYNNIPWLIWIQMLVFVLLLLLLCVIGIFSFDIVDNSYSSSDSVPSTS 60

Query: 61  SSSVSKTSSSCNP------------------SAQVADNHDARREITTTTSSNRVRCVGER 120
            SS+SK   S NP                  S QV  +   + EIT   +        E 
Sbjct: 61  GSSLSKRFLSGNPIPISHHGLGFSVNSSLVQSHQVGSSQSIKGEITPAVTRRVTTVTEEG 120

Query: 121 DGSSMKDVASSSVAARFFHPCRYFDFAKEAFLKCLGLDSESPDEE 137
           +GS  KD + S       HPC  F  A  AFLKC G+D  + + E
Sbjct: 121 EGSLEKDSSHS-----LHHPCTLFRLAGSAFLKCFGIDRSTEETE 160

The following BLAST results are available for this feature:
BLAST of Spo04554.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902202920|gb|KNA14421.1|1.0e-69100.hypothetical protein SOVF_1075... [more]
gi|731339873|ref|XP_010681092.1|3.2e-3462.3PREDICTED: uncharacterized pro... [more]
gi|731339871|ref|XP_010681091.1|1.5e-3156.7PREDICTED: uncharacterized pro... [more]
gi|870857082|gb|KMT08658.1|1.2e-2253.8hypothetical protein BVRB_6g13... [more]
gi|970023133|ref|XP_015072902.1|4.3e-1542.0PREDICTED: uncharacterized pro... [more]
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BLAST of Spo04554.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9R4J4_SPIOL7.3e-70100.Uncharacterized protein OS=Spi... [more]
A0A0J8C9I6_BETVU8.7e-2353.8Uncharacterized protein OS=Bet... [more]
A0A0V0HHU3_SOLCH2.1e-1341.5Putative ovule protein OS=Sola... [more]
A0A0B0N2S6_GOSAR6.3e-1343.3Uncharacterized protein OS=Gos... [more]
M1AZK3_SOLTU8.2e-1339.0Uncharacterized protein OS=Sol... [more]
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BLAST of Spo04554.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo04554.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1
Match NameE-valueIdentityDescription
AT5G64880.11.2e-1035.1unknown protein[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR35771FAMILY NOT NAMEDcoord: 1..140
score: 7.2
NoneNo IPR availablePANTHERPTHR35771:SF1SUBFAMILY NOT NAMEDcoord: 1..140
score: 7.2

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006446 regulation of translational initiation
biological_process GO:0008152 metabolic process
biological_process GO:0015991 ATP hydrolysis coupled proton transport
biological_process GO:0016049 cell growth
biological_process GO:0000902 cell morphogenesis
biological_process GO:0007030 Golgi organization
biological_process GO:0048193 Golgi vesicle transport
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0090503 RNA phosphodiester bond hydrolysis, exonucleolytic
biological_process GO:0007033 vacuole organization
biological_process GO:0010228 vegetative to reproductive phase transition of meristem
cellular_component GO:0005634 nucleus
cellular_component GO:0005777 peroxisome
cellular_component GO:0033179 proton-transporting V-type ATPase, V0 domain
cellular_component GO:0005737 cytoplasm
cellular_component GO:0009507 chloroplast
cellular_component GO:0005840 ribosome
molecular_function GO:0046872 metal ion binding
molecular_function GO:0004535 poly(A)-specific ribonuclease activity
molecular_function GO:0003723 RNA binding
molecular_function GO:0016740 transferase activity
molecular_function GO:0003677 DNA binding
molecular_function GO:0005515 protein binding
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0015078 proton transmembrane transporter activity
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0003743 translation initiation factor activity
molecular_function GO:0047617 acyl-CoA hydrolase activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo188000.77Barchart | Table
Spo148810.74Barchart | Table
Spo140870.73Barchart | Table
Spo131840.73Barchart | Table
Spo012610.73Barchart | Table
Spo198700.73Barchart | Table
Spo136140.73Barchart | Table
Spo185750.72Barchart | Table
Spo119230.72Barchart | Table
Spo248080.72Barchart | Table
Spo086450.71Barchart | Table
Spo132020.71Barchart | Table
Spo050470.71Barchart | Table
Spo154470.71Barchart | Table
Spo156390.70Barchart | Table
Spo093990.70Barchart | Table
Spo041220.70Barchart | Table
Spo083390.70Barchart | Table
Spo212140.69Barchart | Table
Spo240400.69Barchart | Table
Spo076190.69Barchart | Table
Spo223970.69Barchart | Table
Spo138840.69Barchart | Table
Spo156430.69Barchart | Table
Spo025540.69Barchart | Table
Spo017270.68Barchart | Table
Spo271650.68Barchart | Table
Spo205620.68Barchart | Table
Spo036070.68Barchart | Table
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