Spo04425 (gene)

Overview
NameSpo04425
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionZinc knuckle (CCHC-type) family protein
Locationchr3 : 3472739 .. 3484331 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TCGGTTTATGGATGATCGGATGGGGTCTGATTCAAATCAAATCGGATTGGTTCATATTGAAATGTGTTTTCTGGATTAGATCAAGCCATTGTTTATAAAGGTAGTAATATCGATGGGAAATACAATATTTTGTTTAGTGACTAACAATAAATTATTATTCTGCTATAAGCTAACTAATATTTGAGGTCGGACGATTCGGTCAATTCCGTTTGGTTATTTGGGTTCAAGGCAATTCGGTTCGGTTAATTGGGTTGAGTTAATTCGGGTATCAATTCATTCAAGGTCAAGTCAATTTGAAACCTATTTTTGTTTCGACTCGTATCGTTTTCAAGTTTCGGGTTAACTTCGTGTTATCGTTTTAGCTCAAAATTGAGAACCCGTCCGGGTTAGTTTTGTCGGGTCTAATTACTATTTACGCCCCTGTCAAACCCAATGAGCTTGGTAAGTCGGTGGGGGCAAGTCTAGGCTTTACTAACCCAACCCTGCGACCACCTCTATCCGAATTCGTGGGTTGAAGTTCAAACCAAGACCTCTCCGAATCTCCGCGAAGTGGATCGGTCCAAGTCGGGTTGAACCCTTGTCAAACACGGTGCGATCACCGATCGGTTAGTCGGTGGGACAAGTCTAGCCGTCTAGGCTCTATTAACCCCAACCCAAATGACCACCTCTATTTGGGGTTAGATTATAGACCTTGACCTATTCAGTCTGAAGCGCCTCTTCTCCCTCTCTTCCCAAACCCTGCCTAAAACCCCTAATTCACAGTTACCTTCTTCTTCAATCCTTCATCAACAGCAGCAAAAGCTTGAATCATACAAAAATGGTGAGTAAAAGACAGAAAGAAGCTAAGAAAAAGTTCAAACAAGAAAACCCTGGATTGTTTCCAAAGCCTGAACCAACCCCACCAAAAGATCCCACCAGAAAGAAGAAGAAAAAACCCGATTTTAAGAAATCTAAACCAAATCATCCCAAAACCCTAAATGATTCAAGTAAACCCTCTTTTACCAGAAAACCCTCTTTTACAAAAAAACCCTTGAGGGTTCCTGGGTTGAAGATTGGTGATTGCTGCTTCATTTGCAAAGATGTTCATCATATTGCCAAAAGTTGTCCCGAAAAAGCTCAGTGGGAAAAGAATAAGGTCCGTTTTTCTTTTTCTATGCTTTAATGGGCACTTGAAACTTCAATTTTTCAGGAATTTGGTTGAATTTTATTTAATTTTTGCATTTTTATTTGAAACTGCTGTTAGAATGTGGTAGATTGATTTTTTTGATGAATTATGATTCCTTACATTGGTTTTGGGTGTATGTTTATAATGGTGTTACAGATTTGTTTATGTTGCCGACAACGCGGTCATAGTATGAAGAACTGCCCCAACAAGGATGGTGAATTTGTTGAAGCAGCTGGACAAAAGTTGTGTTACAATTGTGGTGAAAATGGGCATTCTTTGTCTCAATGCCCTCAGCCATTGCAAGATGGTATGGTCATTTTGTGCTATTTGATTCTCATTGTAGCACTTTGACTCGTTTAAAATTGATCATTGATATGGAAAATTGTTTGAATAACTTTTCTTTATGCTAGTTAGGGAAGAATTTAGAGGTTGTCGTTGATAGTGAATGAGCGAAATTAGTATATATGTCAGACAGTTAAAGATAGTAAGCTGTGTTTTGGTGTAATTAGGCAATCTCAATTCAATATAATAGATGGGACATTGCATCATGAGTCATACAGGTTCCAGTAGAGTTAGTCGTTTCATGCTAGAAGCTCAATTTTAGAATTGGTGTTCTACTTTGGTGTGTGGAACCGCTTTTATAGTAGATAAACAATGCTAGGATATGAGAAAGCCCCTGATTAGGGGTGTTTGATGTCAACACGAGTATTTTAAACATATAGAACTTAGACAAGTATACTTTAGGTCAATCATTTACATAACTATACAAAGTATCTACTGTCAAACTTTTTCACCTGATGATTTTATTATGTAGAGATCTTCTGTGGTTTTAGAGAATCCTACTATCGAAACCATGTTCTGCTTCTTAAGCTTAGATTATAATCAATATAGGTGTTTTTTGGTATAGGGGGTTAATGTGAACCCTAGTCAGCCAAATTCAGCCACTGTTTTATAGCCAATCTAATATAGTTGAGGATAGGAGATAGTGTGAACTGTTTGTGTATTTTAACCTGATCTAGAATGATCTCACTGTCTTCTTAAATGATTTTATGAACTGTCAACTAATGCTTGATTGAAGACCTTCGATATCTCTTGAAGTCCTTGCTTCCCTTGTATTCTGTTCTTTGTTTCTTAATTCCCGAGGTACAGGAGTTGACATGCTTTATTCTTTCTATAGCTTCTCATCCTTTATTCTTTCTATAGCTTCTCATCCTTTAGTTCTTTTCATACGTACTTGTTTGCGCTTTGCTTAGCACTCTTAGGCCTCTCTAGTATCTGCAATATCGTTCATGTTTGTTTATCCTATTAACCTTCGCCGCTGGTAGTGAAATATTAGTAACTAAAAGTACTTCAAATGTCCTTAGTACCTTTCAACTCAACAAAAGTAGTTACAGATTAGCCACTTTGGCAACAGATGCTGCATCGTGATTGCTGACTCCTTTCTATATAACTTCCTATCTACTTGCTTTTCATGTATCCCCTCCATTAGTAATTGTTTGAATAATTTGACAAAATATGCTTAGTAAGAAGTATTGCCTTTAACAACTATGATTTATGTAGTAACAAAGTATCTGTTATGTCTGTGGTCTACCTGTAACCACTATGATTTACTACCTCGGTTGCATAATGATTTTAACATTTCCGTTTCGTCCGTACCATAATGTTCTTAAACATTGTGCTTTATACTATTTTAGACATGAAAATATACTATCTTAACCTTCTTAGCCCACTATATTTACCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACTATGATTTACTACCTCGGTTGCATAATGATTTTAACATTTCCGTTTCGTCCGTACCATAATGTTCTTAAACATTGTGCTTTATACTATTTTAGACATGAAAATATACTATCTTACCCTTCTTAGCCCTACTCTCTACAATCCTATGATTTCTTTTATGCTATTAAGAGGGTATGTTGACATACAAACGTTGTTATTCCCAGCAATTAAGACTTTAAGTTATAATAGTGCTATAACTTTAGCTAATCTCCTGATTATAGAACATTGTGATGTTAGTGCAGTCTTTTTTCTGATCCTGACATAACATTTGTTAGAATTGCCTTGGCTTAATTCTGAAAGCATTAGTTTGTATAGTGTCTACAGCCTTCAAGTCACCGTGCTTGCTTCAAAATGAATTGTTAAAAGAAAACTAAGAGTCTAAGAGCAAGCAGTTACTCAAAATTTGTGAGAAACTTCCAGGGAGTTCTCTGTGCTAGTAAGTTGATCCACACAAGAAACTACTGAGTGAAACTTAACACCTGATAGCAGGTGGAACTTGAGATTTTGTTCCAAAACTAACTCTTATATATGTAATTTTTTTAACCTTGTAAATAGTCTGTAGGAACTATGACTAATAAGAACAATAATTAGAACAAGCTTATCTGTAACAATGTCGTGGCGTGACACCAATCACTGCCCTAAAGTCGAATTTGCCCCGCTAAGTACACGCGGACTCGTAGCAACCGACCCCTAGGGATACACGACTCCAATCCTTCGGTGTACGACGAAGAACTAGATTGAGAACATCCTTAAGCAATGCCCAGAACAATGGAGGTTTTGTGTTTTTATTTCGGAGAAGAGTAAAAGAACAATTTTTCTGTGTGTTTTCTGTGGAAAAAGATGATGAATTTATAGAGAGGTTTTTGGGAAACTGTAACAGCCATAAACGGCTAGTGGAGCAGTTACCGGAGTAATGGGGAACTGCAACAGTCATAAAACGGCTAGTGGGGTTAATGGAGCAATTTCCAGAGTTAGTGGGTTGATTAAGTCTCTTGACTTAATCAAACCGCCCTTGACCAAAAAGAATAACCCGGTCCACAAAACCCACCCCACGCCGCGAACCGCATTCGCCAAGTACCAAGTACCAAGGCCCACGGCCCACGGCCCTCGCCCGAGCCCGGCCCGGCGCGCGCGCGCGCGTGTGTGTGTTGTGACCACCCATGCCACTCTCAAGCACTCTTTAACAAATGATTAAAGGGTAGTGCAATATATAAAGAAGGTAGTATGTGGGTTTTTTATCAATGTGGGACAATTGGTTTTTCATTCTTTTGAAGCATTCCTTTTTGGAGGAACAAACTCCAACATTCCCCCACATGATTCAAAAGAAGGACGGCTTTGGTAATGAAAGATGTTCTGGGCAAGGGATACTTAGTTTTGCAAGTATCAATGTCTTGTGGACTTGAATTGATACCTAGTGCATACTAGTATGTCATACAGCCATATAAGGTGGATTTATCCTTGAACCCTGCATGGGGATTGTAGTAACACAACAGCGCACCAAACTTTTCTCAAAACAAGTAGTGTTCTCGCGAACTTTAATAGTCAGTGCCCCACAAGTTCCTGGTATTTCATGAACGCTCTAGAGGTCCTAAGCCAAGGGACCTCATAGGGGGTTGGGCGTAGCCCCCACATTCACATAGGTAAGTTCATCAGGTTTATACTGTCATAAACCACCTCAATAGGCTATGAACTTATTAAGAGCTTTGGCTCATCCTTACTCATTTGACAGTAAGACAAAATACTACATCACTTTATTAATAGGAATGGCAGTAGTATACAAAACGCGAGTTCTTTTGTTACTTAGTTTGACCCATTGAACTTAGATTTCTCCAAGATGGGTATCCATCACAATTCACTCCTCAATAGGCTTTAAACCCATTCCTTGTGCTGACTCATGCACCATTTTCTTACAAAGGCCTTTGGNTCAATAGGCTTTAAACCCATTCCTTGTGCTGACTCATGCACCATTTTCTTACAAAGGCCTTTGGAGAGAGGATCTGCAATATTCCTCTCCGACTTTACATACTCAAGTGATATCACATTATTTCTGATCAGATCTCTAACAATTGCATGCCTCACGCGAATGTGCCTCCTTTTTCCATTATAGGATTGATTGTTCGCTACCCCAATTGCAGCTTGTGAGTCACAATGCATGGACACTGATGGAGTTGGCTTCCCCCACAATGGTATGTCAGCTAGCAGGCTCCTTAGCCACTCGGCTTCTTGACCTGCCAATTCTAAAGCAATAAACTCAGATTCCATTGTAGATTTAGCAATACAAGTTTGTTTAGATGATTTCCATGAAATAGCACCACTAGCAAGAGTGAAAACATAACCACTAGTAGAATGAATCTCATCATTATCTGACACCCAATTAGCATCGCAATATCCTTCTAAAACACATGGTGTCCTATGATAGTGCAAACCCCAATTGATAGTGCCTTTCAAGTACCTCAATAGTCTTATTAAAGCATTCCAATGATCACGATTAGGACTATGAGTATACCTACTCAATCTACTAACAGCATATGCAATATCTGGTCTAGTATAATTCATTAAAAACATCACACTTCCAATGATCTTGGCATATTGTTCCTGAGACACACTATCACCTTTATTTTTCTTCAAAGTAATATTAGAATCATATGGGGTTTTCGCAGGTGTACAATCAAATTGATTAAATGTCTTTAAAATTTTCTCAACATAATGAGATTGGTTTAAAGACAGCCCATATGAAGTTCTAATAATTTTTATGCCAAGAATAACATCCGCCTCTCCCAAATCCTTCATTTCAAAACAAGAATTTAAGAAGGCCTTAGTTGCATTAACAACATCTATATTGGTTCCAAAAATTAACATATCATCCACATATAGACATATGATCACACAACCAAACTTGTCAAGTTTAGAATACACACAAGCATCAGAATCATTAACACAAAAACCATCAGAAATAATAGTTTGATGAAACTTGTCATACCATTGCTTAGGTGCTTGTTTTAGACCGTATAACGATCTAATGAGTTTACATACCTTGTTTTCCTGTCCAGGAGCAATACATCCTTCTGGTTGCTTCATGTAAATCTCCTCTTTCAAATCACCATTCAAAAAAGCAGTTTTCACATCCATTTGATGCACAATAAGATCATGAATAGATGCAAGTGCAATTAAAGCTCTAATGGTAGCAACCTTTGTCACAGGAGAATAGGTATCAAAGAAATCTAGACCTTTCTTTTGATGATGACCACCAACTACTAATCTAGCTTTAAACTTGATCAAATTTCCATTAGTATCCTCTTTCTTTGTAAAAATCCACTTACTTCCTAAAGCTTTACAACCCCTAGGAAGTTCAGTCAAAACCCAAGTATTGTTACTCATGATAGACTCTATCTCACTATTTATGGCCTCTAACCAAAAACTAGAGTCAACAGACCTCATAGCCTCCCCATAGGTCCTAGGATTTTCTTCTAAAATAAATGCATCTATCTCATGCTCATTCAGAAACTCATTTTCAATAAGAAATGCAGTTATGAAATCAGGACCAAAACTAGACTCAGTTTTAGCTCTCTTACTCCTTCTAGGTTCTACATTAGATGATGCAATGTCATGATGCACAACAGAAGATGGAGATGGAACAGGTAAACTTGCTTGCACATTCAATTTCATAGGAAAAATATGCTCAAAAAATTCAACATCCCTTGACTCACGAATTGGACCAAAACCAGATGCATCCTTAAGAATGAGTCTATATGCAGCACTGTTAGAAGCATAACCAATAAAAATCCCATCAACAGTCTTAGGCCCAATCTTACTCCTTTGGAAATCAGGAAGTCCTATTTTTCCTAGACACCCCCACACTTTAAGGTAACTCAGGTTTGGTTTAAAACCTCTCCATAGCTCAAAAGGGGTTTTATCTAGTTTTTTATGGGGAACACGATTAAGCACATAGCAAGCAGAAAGAATGGCCTCACCCCACATGTTAGTAGGCATACCCGAACTAATAAGCATAGCATTCATCATATCCTTAAGGGTTCTATTTTTCCGCTCAGCTATTCCATTTTGTTCGGGGGTATAAGGAGCTGTAGTCTCATGAATAATACCATTAGTTTCACAAAATTTCTTAAGGGGATTGCTATCATACTCTCCACCTCTATCTGATCTCAGCCTTTTAATCTTAAGGTTTAATTGGTTTTCAACTTCAGCCTTATAGATAAGAAACTTTTCTTCAGCCTCATCTTTAGTACTCAACAAATAAACCTTAGTAAATCGGGAAAAATCATCAACAAAAGTAATATAGTAATGCTTACCTCCTCTACTCATTGAATTCTTAAAGTCACCTAAGTCACTATGAACTAACACAAGTAAAGAAGAAGTACGAGATACACTTTTGTTAAACGCTTTCTTAGGGTGTTTAGCCTCCACACATACTTCACACTTATCGAAAGAAGTATTGCTAAAGTCAGGAATTAAACTAAGTTGTTTAAGTCGTTTAACAGATGCAACATTCACATGACCTAGTCTAGAATGCCATAAAGAAACAGACTCAGCAATATAAACAGAAGTAGTAGGAGTTTTATTATCAGAAACAACATCAAGCACAAACAAACCCCCATTACAAATACATTTCCCACAAAATCCCCATTTCTGGTGAGTACAAGTTTATCAGATTCAAAAGTTAATTTGATGCCAGCTTTGTTCAATAATGCACCAGAAATGAGGTTTCTGCGAATATCAGGTACATGTAAGACATTTTGCAAAGCAATGGTTTTTCCGGAAGTTAATTTCAGAAAAACCTTTCCTTTGCCAAGAACACTCACAGTGCTTGAGTTGCCCATGAAGACACATTCTCCTTCAGAAACTTTTTCGTACTCCTTGAACATCTCCTTGCTAGAACAAATATGACGAGTTGCACCGGTATCAAGCACCCATTCTGTTACGTTGCTCACCAAGTTTACTTCCGACACCACAGCAGCAATGATTTCATCCTCAACAAGATTGGCTTGAGCTTTATTCTCCTTTGCTTTGTTGTTCGGTCCATGCCCTTGTCTGCAATCTTTTGCAATATGCCCGAACTTACCACAAGTGAAGCAGTTTCCCTTGAATTGCCTATTTCCCTTGAAGTTGTTTTTGGCTTGTCTGGTCCCATGAAGTTGATTAGAACCTTTTCCCTTCGAACCTTTATTATAACCTGCATTTTTAGATTCAACAAGGTTAGCAGTAGAAGAGGAATGATCCTGAGATTTCCCTTTGGTTTGGATGCGATTCTGCTCTTCTATCTTGATCCCAGAAACCAACTCTTGGAGGGTGAAATCCTTCTGTTTGTGCTTCATGGAGTGAACATAATTCTGCCAGGAAGGAGGTAGTTTTTCAAGAAGACAATTGGCTTGAAACTGATCACAAAACTTCATTCCTTCAGCAATAATATCAGCACATAGATTCTCATACTCATGTACTTGATCTAAAACAGGCTTATCATCAGTCATACGAAAATTTAACCACCGAGAACAAGCATACTTCTTAGTCCCAAAATCATCAGTACCATACTTAGATTTCAAAGCATCCCAAATATCCTTTGCATTCTTTGACTTACTATGAATCATGTAAAGGGAAGTAGTCATGTAATGCAACAACATACCACGACAGGTCTTATTATCCTTATCGAAATCCCTAATAGAATTAACAGGGGCTACATCAATAAGAAGAGTATAATCTACCCCAATTTGACCCAAGAAAAATTCCATTTTATCAGACCACATCCTATAGTTTTTCCCATCAAAATGTTGCATTTTCGACATATCAGGAATGAAAGCATGGGAAAGCATGGATGAGGAAAGGGGTACAGCAGTAGGAATATTATCAGCCATAATTCATGAAAAGAAAAATAAATTCGACTTTAGATTGTAGGAACTATGACTAATAAGAACAATAATTAGAACAAGCTTATCTGTAACAATGTCGTGGCGTGACACCAATCACTGCCCTAAAGTCGAATTTGCCCCGCTAAGTACACGCGGACTCGTAGCAACCGACCCCCAGGGATACACGACTCCAATCCTTCGGTGTACGACGAAGAACTAGATTGAGAACATCCTTAAGCAATGCCCAGAACAATGGAGGTTTTGTGTTTTTATTTCGGAGAAGAGTAAAAGAACAATTTTTCTGTGGAAAAAGATGATGAATTTATAGAGAGGTTTTTGGGAAACTGTAACAGCCATAAACGGCTAGTGGAGCAGTTACCGGAGTAATGGGGAACTGCAACAGTCATAAAACGGCTAGTGGGGTTAATGGAGCAGTTTCCAGAGTTAGTGGGTTGATTAAACCCACCCCACGCCCGCGAACCGCATTCGCCAAGTGCCAAGTGCCAAGTGCCAAGTGCCAAGTGCCAAGTGCCAAGGCCCACGGCCCTCGCCCGAGCCCGGCCCGGCGCGCGCGCGTGTGTTGTGACCACCCATGCCACTCTCAAGCACTCTTAAACAAATGATTAAAGGGTAGTGCAATATATAAAGAAGGTAGTATGTGGGTTTTTTATCAATGTGGGACAATTGGTTTTTCATTCTTTTGAAGCATTCCTTTTTGGAGGAACAAACTCCAACATAGTCCACAACTCCACACCACCTTCCTTGAAACCAAGTGTCATTCTAGGCTTCTTATATACCGGTGTACTTTCGTACCCTTCTTCTGTATATCTTCAGGATGATTTTGTTAATTTTTTTCCCATTTTTTTGGGGTTAATGTAGGTGGAACAAAGTTTGCCCTATGCTTTATCTGCAATGAACGTGGACATTTGAGTAAGAACTGTCCCAAAAGTACCCATGGGATATATCCGAAGGTAAAATAAGGATTCATTTATTACTGCAAACTGTCATATGTGTATATTTTTTGTTTAATTTTGTTATTCATTGTTGTTTCTTCTAACTTTCCCATCTTGCCTTAAATCCCTGAATTCTGCTTACGTGTATAATGTTTAACTGATGTACAGGGTGGGTGCTGTAAAATATGTGGTGGTGTGAATCATTTAGCTAGAGATTGCCCAAACAAAGGAAATAGTTACGGTTCTGCTAGTAGAGGAGGCAGAGGTCAGTTTCTTCTTCGTATAAATTGCATATTCGGCAGTTATGAACTAACAACTGTGATGCGACTGATGCTCAATACATATCGCCGATATCGGATTCAACCTGAGAAATTTCATGATTTTATTTTTGTGTTGTTTGTCTGCTTGAATACTTCCCTGGGTCCTTAATAATACAGTGTAGGTCACATTTGGTTTTGGGTCATGCTCAAATGCTCATTAGTAAATAACTAAATACCATCCTGGATCTTGTAAATGAAATGGAAAGAGTTAACCTGAGAAATTTCAGGATTATATGTATATCTCCGTTCTCTTTCAATACTCCATCGGTCCCTATATAAAACTCCGCAGGTCAAATTGATTTGGGATCATTTCAAAAGAATTTAGCTAGAACACCCTAATCCGTTATTATTTTCCCATCTTCACTAGTCCAATGTAGTCTTTATGTTGCAAATTTGCAATACTTACCAGGGTGTCGTTTCAGGGAAATTTAGAAAATTCTAAACTTCTTTTTGAATGATAAAGTGGCCTATCATTGTAGGATAAACTAAAACTGAAATCTGGCCTACTATTGTTGGATAAACTAAGAGCGTGTTTGGTATAGAGTTTTAAGTGATGGAAATGGAATCAATTAACTAATTCCATTACCTAATGTTTGGTATGAGAGGAGTGGTAACACAATCCATTTCCTAAGGATAAGTGGTAACCATTACCACAATTTGTTACCTCTCCCACTCTATGGTAACAACATTGTTACCCTCCTTAATCCCCAATTTGTTACAAGTGATTCCTTTCCTAAGGTATACCAAACAACTAATAGTGGAAATAGGTAACACTACCCTTTCCCCTTATTTATTTCCTTTCGTAAGTTTATAACAAACATGCCCTAAAACAGAAACCGTATTACCATGATGGTGATGCCTATTGATTTCACCTTGTTTGGCCAATATAAGATTTCACTTGTTAGTCACGACTCATGACTCATGAGTTGACTCGTGGTGCTACAAAACCAAATTGTTTAATTTTTGCTGAGATGTTTTTCTGCATCATCCCACCACAGTTTCTGAATTCTGATGTTGTTTTTATAATGTTTCTTCAGTATCTATACTAGAACAGTCGCAGTCAAAAGTTACTAAGCTATATAGTGGGGATGATCTTGAAGATGACTTCACGATAGAGGACGACTCCAAGGATTTTGAAGGTGATCCTGCATCTGAGAATCCCGCAAAGGTAAAGAAGAAGCAAGGTCCGAAAGTGGTGAATTTTGTTGGTTGACATTGTTGATCAGATAGTTTGAGGTATTCTGTAAAATTCGACACTCGTATAAATTTTTTGTTATTTTTTACCGTACTAGAGGTTCTTTTCATGTTCCTCTTACTTTGGAAATCTTGTATCAATTTTTAGCATTTTTGGCATTAATGGCTGTATTAGTTTGTATTCCAATGTTTAATTCTCCTGGTCTAGTCTTGTCTCTTTCTTTTTCAATGTTTTCTTCATAGCTTAACTTAGTTTAGTTATGGAAAGCTCGATTTGGTGATCAACCTTGA

mRNA sequence

TCGGTTTATGGATGATCGGATGGGGTCTGATTCAAATCAAATCGGATTGGTTCATATTGAAATGTGTTTTCTGGATTAGATCAAGCCATTGTTTATAAAGGTAGTAATATCGATGGGAAATACAATATTTTGTTTAGTGACTAACAATAAATTATTATTCTGCTATAAGCTAACTAATATTTGAGGTCGGACGATTCGGTCAATTCCGTTTGGTTATTTGGGTTCAAGGCAATTCGGTTCGGTTAATTGGGTTGAGTTAATTCGGGTATCAATTCATTCAAGGTCAAGTCAATTTGAAACCTATTTTTGTTTCGACTCGTATCGTTTTCAAGTTTCGGGTTAACTTCGTGTTATCGTTTTAGCTCAAAATTGAGAACCCGTCCGGGTTAGTTTTGTCGGGTCTAATTACTATTTACGCCCCTGTCAAACCCAATGAGCTTGGTAAGTCGGTGGGGGCAAGTCTAGGCTTTACTAACCCAACCCTGCGACCACCTCTATCCGAATTCGTGGGTTGAAGTTCAAACCAAGACCTCTCCGAATCTCCGCGAAGTGGATCGGTCCAAGTCGGGTTGAACCCTTGTCAAACACGGTGCGATCACCGATCGGTTAGTCGGTGGGACAAGTCTAGCCGTCTAGGCTCTATTAACCCCAACCCAAATGACCACCTCTATTTGGGGTTAGATTATAGACCTTGACCTATTCAGTCTGAAGCGCCTCTTCTCCCTCTCTTCCCAAACCCTGCCTAAAACCCCTAATTCACAGTTACCTTCTTCTTCAATCCTTCATCAACAGCAGCAAAAGCTTGAATCATACAAAAATGGTGAGTAAAAGACAGAAAGAAGCTAAGAAAAAGTTCAAACAAGAAAACCCTGGATTGTTTCCAAAGCCTGAACCAACCCCACCAAAAGATCCCACCAGAAAGAAGAAGAAAAAACCCGATTTTAAGAAATCTAAACCAAATCATCCCAAAACCCTAAATGATTCAAGTAAACCCTCTTTTACCAGAAAACCCTCTTTTACAAAAAAACCCTTGAGGGTTCCTGGGTTGAAGATTGGTGATTGCTGCTTCATTTGCAAAGATGTTCATCATATTGCCAAAAGTTGTCCCGAAAAAGCTCAGTGGGAAAAGAATAAGATTTGTTTATGTTGCCGACAACGCGGTCATAGTATGAAGAACTGCCCCAACAAGGATGGTGAATTTGTTGAAGCAGCTGGACAAAAGTTGTGTTACAATTGTGGTGAAAATGGGCATTCTTTGTCTCAATGCCCTCAGCCATTGCAAGATGGTGGAACAAAGTTTGCCCTATGCTTTATCTGCAATGAACGTGGACATTTGAGTAAGAACTGTCCCAAAAGTACCCATGGGATATATCCGAAGGGTGGGTGCTGTAAAATATGTGGTGGTGTGAATCATTTAGCTAGAGATTGCCCAAACAAAGGAAATAGTTACGGTTCTGCTAGTAGAGGAGGCAGAGTATCTATACTAGAACAGTCGCAGTCAAAAGTTACTAAGCTATATAGTGGGGATGATCTTGAAGATGACTTCACGATAGAGGACGACTCCAAGGATTTTGAAGGTGATCCTGCATCTGAGAATCCCGCAAAGGTAAAGAAGAAGCAAGGTCCGAAAGTGTTATGGAAAGCTCGATTTGGTGATCAACCTTGA

Coding sequence (CDS)

ATGGTGAGTAAAAGACAGAAAGAAGCTAAGAAAAAGTTCAAACAAGAAAACCCTGGATTGTTTCCAAAGCCTGAACCAACCCCACCAAAAGATCCCACCAGAAAGAAGAAGAAAAAACCCGATTTTAAGAAATCTAAACCAAATCATCCCAAAACCCTAAATGATTCAAGTAAACCCTCTTTTACCAGAAAACCCTCTTTTACAAAAAAACCCTTGAGGGTTCCTGGGTTGAAGATTGGTGATTGCTGCTTCATTTGCAAAGATGTTCATCATATTGCCAAAAGTTGTCCCGAAAAAGCTCAGTGGGAAAAGAATAAGATTTGTTTATGTTGCCGACAACGCGGTCATAGTATGAAGAACTGCCCCAACAAGGATGGTGAATTTGTTGAAGCAGCTGGACAAAAGTTGTGTTACAATTGTGGTGAAAATGGGCATTCTTTGTCTCAATGCCCTCAGCCATTGCAAGATGGTGGAACAAAGTTTGCCCTATGCTTTATCTGCAATGAACGTGGACATTTGAGTAAGAACTGTCCCAAAAGTACCCATGGGATATATCCGAAGGGTGGGTGCTGTAAAATATGTGGTGGTGTGAATCATTTAGCTAGAGATTGCCCAAACAAAGGAAATAGTTACGGTTCTGCTAGTAGAGGAGGCAGAGTATCTATACTAGAACAGTCGCAGTCAAAAGTTACTAAGCTATATAGTGGGGATGATCTTGAAGATGACTTCACGATAGAGGACGACTCCAAGGATTTTGAAGGTGATCCTGCATCTGAGAATCCCGCAAAGGTAAAGAAGAAGCAAGGTCCGAAAGTGTTATGGAAAGCTCGATTTGGTGATCAACCTTGA

Protein sequence

MVSKRQKEAKKKFKQENPGLFPKPEPTPPKDPTRKKKKKPDFKKSKPNHPKTLNDSSKPSFTRKPSFTKKPLRVPGLKIGDCCFICKDVHHIAKSCPEKAQWEKNKICLCCRQRGHSMKNCPNKDGEFVEAAGQKLCYNCGENGHSLSQCPQPLQDGGTKFALCFICNERGHLSKNCPKSTHGIYPKGGCCKICGGVNHLARDCPNKGNSYGSASRGGRVSILEQSQSKVTKLYSGDDLEDDFTIEDDSKDFEGDPASENPAKVKKKQGPKVLWKARFGDQP
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo04425.1Spo04425.1mRNA


Homology
[Close]
BLAST of Spo04425.1 vs. NCBI nr
Match: gi|731322418|ref|XP_010671878.1| (PREDICTED: DNA-binding protein HEXBP [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 396.7 bits (1018), Expect = 3.300e-107
Identity = 200/275 (72.73%), Postives = 228/275 (82.91%), Query Frame = 1 

		  

Query: 1   MVSKRQKEAKKKFKQENPGLFPKPEPTPPKDPTRKKKKKPDFKKSKPNHPKTLNDSSKPS 60
           MVS+RQ+EA+KKFKQENPGLFPKPEPTPPKDPT+ KKKKP+FK  K +  KTL+ S K S
Sbjct: 1   MVSQRQREARKKFKQENPGLFPKPEPTPPKDPTKIKKKKPNFKHKKSDS-KTLDKSRKNS 60

Query: 61  FTRKPSFTKKPLRVPGLKIGDCCFICKDVHHIAKSCPEKAQWEKNKICLCCRQRGHSMKN 120
                SFTKKPLRVPGLK GDCCFICKDVHHIAK+CPEKAQWEKNKICL CRQRGHS+KN
Sbjct: 61  -----SFTKKPLRVPGLKPGDCCFICKDVHHIAKNCPEKAQWEKNKICLYCRQRGHSLKN 120

Query: 121 CPNKDGEFVEAAGQKLCYNCGENGHSLSQCPQPLQDGGTKFALCFICNERGHLSKNCPKS 180
           C NK  E  E   +KLCYNCGE GHSLS+CP+ LQDGGT+FALCFIC ERGHLSK+CPK+
Sbjct: 121 CLNKSDEVAE---EKLCYNCGETGHSLSRCPRQLQDGGTQFALCFICKERGHLSKDCPKN 180

Query: 181 THGIYPKGGCCKICGGVNHLARDCPNKGNSYGSASRGGRVSILEQ-SQSKVTKLYSGDDL 240
           THGIYPKGGCCKIC GV HLARDCPNKGN +G A+ GG   I EQ  +S+VTKL SGDDL
Sbjct: 181 THGIYPKGGCCKICSGVTHLARDCPNKGNRFGVAANGGGYGINEQPRRSQVTKLISGDDL 240

Query: 241 EDDFTIEDDSK-DFEGDPASENPAKVKKKQGPKVL 274
           +DDF IE+D K   + + ++ +PAKVKKK+GPKV+
Sbjct: 241 DDDFMIEEDDKVKNDSEKSAGDPAKVKKKEGPKVV 266
[Close]
BLAST of Spo04425.1 vs. NCBI nr
Match: gi|703144672|ref|XP_010108340.1| (Uncharacterized protein L484_006495 [Morus notabilis])

HSP 1 Score: 335.5 bits (859), Expect = 9.000e-89
Identity = 172/286 (60.14%), Postives = 207/286 (72.38%), Query Frame = 1 

		  

Query: 1   MVSKRQKEAKKKFKQENPGLFPKPEPTPPKDPTRKKKKKPDFKKSKPNHPKTLNDSSKPS 60
           MVSKRQKEA+K+FK  NP LFPKPEPTPPKDP +KKKK    +  K   PK+  D++K  
Sbjct: 1   MVSKRQKEARKRFKVANPELFPKPEPTPPKDPNKKKKKSKFKRDEKKADPKSRGDATKKL 60

Query: 61  FTRKPSFTKKPLRVPGLKIGDCCFICKDVHHIAKSCPEKAQWEKNKICLCCRQRGHSMKN 120
              K    K PLRVPG+K G+ CFICK   HIAK CPEKAQWEKNKICL CR RGHS+KN
Sbjct: 61  I--KKGLRKHPLRVPGMKPGESCFICKAKDHIAKLCPEKAQWEKNKICLLCRSRGHSLKN 120

Query: 121 CPNKDGEFVEAAGQKLCYNCGENGHSLSQCPQPLQDGGTKFALCFICNERGHLSKNCPKS 180
           CPNK+ + V+   +KLCYNCG++GHSL +CPQPLQ+GGTKFA CFIC E GHLSKNCP++
Sbjct: 121 CPNKNDKTVD---KKLCYNCGQSGHSLDKCPQPLQEGGTKFATCFICKESGHLSKNCPQN 180

Query: 181 THGIYPKGGCCKICGGVNHLARDCPNKGNSYGSAS-RGGRVSIL--EQSQSKVTKLYSGD 240
           THGIYPKGGCCKICGGV HLA+DCPNKGN   +AS +  R   +  ++ + +VTK +SGD
Sbjct: 181 THGIYPKGGCCKICGGVTHLAKDCPNKGNRESAASDKASRTFSISDDRPRGQVTKFFSGD 240

Query: 241 DLEDDFTIED----------DSKDFEGDPASENPAKVKKKQGPKVL 274
           DLEDDF  +D          + K   G  + E+  K +KKQGPKV+
Sbjct: 241 DLEDDFMADDTYGGKKDKSTEPKAGSGSNSQESNLKSEKKQGPKVV 281
[Close]
BLAST of Spo04425.1 vs. NCBI nr
Match: gi|723679637|ref|XP_010317605.1| (PREDICTED: uncharacterized protein C683.02c [Solanum lycopersicum])

HSP 1 Score: 330.5 bits (846), Expect = 2.900e-87
Identity = 169/275 (61.45%), Postives = 204/275 (74.18%), Query Frame = 1 

		  

Query: 1   MVSKRQKEAKKKFKQENPGLFPKPEPTPPKDPTRKKKKKPDFKKSKPNHPKTLNDSSKPS 60
           MVSKRQ+ A+K++K+ NP LFPKPEPTPPKDP +KKKKK  FKK K        +S  P+
Sbjct: 1   MVSKRQRIARKRYKEANPELFPKPEPTPPKDPNKKKKKKSTFKKKK-------GESKDPN 60

Query: 61  FTRKPSFTKKPLRVPGLKIGDCCFICKDVHHIAKSCPEKAQWEKNKICLCCRQRGHSMKN 120
             +K SFTK P RV G+K G+ CFICK+  HIA+ CP KA+WEKNKICL CR+RGHS+KN
Sbjct: 61  --KKRSFTKHPFRVAGMKPGESCFICKEHDHIARDCPRKAEWEKNKICLLCRRRGHSLKN 120

Query: 121 CPNKDGEFVEAAGQKLCYNCGENGHSLSQCPQPLQDGGTKFALCFICNERGHLSKNCPKS 180
           CPNK+ E V+   +KLCYNCGE  HSL+ CP PLQDGGTKFA CFIC E+GHLSK+CPK+
Sbjct: 121 CPNKNDEVVD---KKLCYNCGETSHSLANCPYPLQDGGTKFASCFICKEQGHLSKDCPKN 180

Query: 181 THGIYPKGGCCKICGGVNHLARDCPNKGNSYGSASRGG-RVSILE-QSQSKVTKLYSGDD 240
           THGIYPKGGCCKICGGV HLARDCPNK      A+ G  ++S  E + + +VTKL SGDD
Sbjct: 181 THGIYPKGGCCKICGGVTHLARDCPNKSGKASDAAIGRFKISQFEDRPRGQVTKLSSGDD 240

Query: 241 LEDDFTIEDDSKDFEGDPASENPAKVKKKQGPKVL 274
           LEDDF  + D      D   ++ AK+KKK+ PKV+
Sbjct: 241 LEDDFNFKAD------DVNEDDDAKLKKKKEPKVV 257
[Close]
BLAST of Spo04425.1 vs. NCBI nr
Match: gi|970014363|ref|XP_015068170.1| (PREDICTED: uncharacterized protein C683.02c [Solanum pennellii])

HSP 1 Score: 328.9 bits (842), Expect = 8.400e-87
Identity = 169/275 (61.45%), Postives = 205/275 (74.55%), Query Frame = 1 

		  

Query: 1   MVSKRQKEAKKKFKQENPGLFPKPEPTPPKDPTRKKKKKPDFKKSKPNHPKTLNDSSKPS 60
           MVSKRQK A+K++K+ NP LFPKPEPTPPKDP +KKKKK  FKK K        +S  P+
Sbjct: 1   MVSKRQKLARKRYKEANPELFPKPEPTPPKDPNKKKKKKSTFKKKK-------GESKDPN 60

Query: 61  FTRKPSFTKKPLRVPGLKIGDCCFICKDVHHIAKSCPEKAQWEKNKICLCCRQRGHSMKN 120
             +K SFTK P RV G+K G+ CFICK+  HIA+ CP KA+WEKNKICL CR+RGHS+KN
Sbjct: 61  --KKRSFTKHPFRVAGMKPGESCFICKEHDHIARDCPRKAEWEKNKICLLCRRRGHSLKN 120

Query: 121 CPNKDGEFVEAAGQKLCYNCGENGHSLSQCPQPLQDGGTKFALCFICNERGHLSKNCPKS 180
           CPNK+ E V+   +KLCYNCG+  HSL+ CP PLQDGGTKFA CFIC E+GHLSK+CPK+
Sbjct: 121 CPNKNDEVVD---KKLCYNCGDTSHSLANCPYPLQDGGTKFASCFICKEQGHLSKDCPKN 180

Query: 181 THGIYPKGGCCKICGGVNHLARDCPNK-GNSYGSASRGGRVSILE-QSQSKVTKLYSGDD 240
           THGIYPKGGCCKICGGV HLARDCPNK G +  +A    ++S  E + + +VTKL SGDD
Sbjct: 181 THGIYPKGGCCKICGGVTHLARDCPNKSGKASDAAIDRFKISQFEDRPRGQVTKLSSGDD 240

Query: 241 LEDDFTIEDDSKDFEGDPASENPAKVKKKQGPKVL 274
           LEDDF  + D      D   ++ AK+KKK+ PKV+
Sbjct: 241 LEDDFNFKAD------DVNEDDDAKLKKKKEPKVV 257
[Close]
BLAST of Spo04425.1 vs. NCBI nr
Match: gi|902191459|gb|KNA11855.1| (hypothetical protein SOVF_131260, partial [Spinacia oleracea])

HSP 1 Score: 328.9 bits (842), Expect = 8.400e-87
Identity = 155/156 (99.36%), Postives = 156/156 (100.00%), Query Frame = 1 

		  

Query: 1   MVSKRQKEAKKKFKQENPGLFPKPEPTPPKDPTRKKKKKPDFKKSKPNHPKTLNDSSKPS 60
           MVSKRQKEAKKKFKQENPGLFPKPEPTPPKDPTRKKKKKPDFKKSKPNHPKTLNDSSKPS
Sbjct: 1   MVSKRQKEAKKKFKQENPGLFPKPEPTPPKDPTRKKKKKPDFKKSKPNHPKTLNDSSKPS 60

Query: 61  FTRKPSFTKKPLRVPGLKIGDCCFICKDVHHIAKSCPEKAQWEKNKICLCCRQRGHSMKN 120
           FTRKPSFTKKPLRVPGLKIGDCCFICKDVHHIAK+CPEKAQWEKNKICLCCRQRGHSMKN
Sbjct: 61  FTRKPSFTKKPLRVPGLKIGDCCFICKDVHHIAKNCPEKAQWEKNKICLCCRQRGHSMKN 120

Query: 121 CPNKDGEFVEAAGQKLCYNCGENGHSLSQCPQPLQD 157
           CPNKDGEFVEAAGQKLCYNCGENGHSLSQCPQPLQD
Sbjct: 121 CPNKDGEFVEAAGQKLCYNCGENGHSLSQCPQPLQD 156
[Close]
BLAST of Spo04425.1 vs. UniProtKB/TrEMBL
Match: A0A0J8FKF2_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g055410 PE=4 SV=1)

HSP 1 Score: 396.7 bits (1018), Expect = 2.300e-107
Identity = 200/275 (72.73%), Postives = 228/275 (82.91%), Query Frame = 1 

		  

Query: 1   MVSKRQKEAKKKFKQENPGLFPKPEPTPPKDPTRKKKKKPDFKKSKPNHPKTLNDSSKPS 60
           MVS+RQ+EA+KKFKQENPGLFPKPEPTPPKDPT+ KKKKP+FK  K +  KTL+ S K S
Sbjct: 1   MVSQRQREARKKFKQENPGLFPKPEPTPPKDPTKIKKKKPNFKHKKSDS-KTLDKSRKNS 60

Query: 61  FTRKPSFTKKPLRVPGLKIGDCCFICKDVHHIAKSCPEKAQWEKNKICLCCRQRGHSMKN 120
                SFTKKPLRVPGLK GDCCFICKDVHHIAK+CPEKAQWEKNKICL CRQRGHS+KN
Sbjct: 61  -----SFTKKPLRVPGLKPGDCCFICKDVHHIAKNCPEKAQWEKNKICLYCRQRGHSLKN 120

Query: 121 CPNKDGEFVEAAGQKLCYNCGENGHSLSQCPQPLQDGGTKFALCFICNERGHLSKNCPKS 180
           C NK  E  E   +KLCYNCGE GHSLS+CP+ LQDGGT+FALCFIC ERGHLSK+CPK+
Sbjct: 121 CLNKSDEVAE---EKLCYNCGETGHSLSRCPRQLQDGGTQFALCFICKERGHLSKDCPKN 180

Query: 181 THGIYPKGGCCKICGGVNHLARDCPNKGNSYGSASRGGRVSILEQ-SQSKVTKLYSGDDL 240
           THGIYPKGGCCKIC GV HLARDCPNKGN +G A+ GG   I EQ  +S+VTKL SGDDL
Sbjct: 181 THGIYPKGGCCKICSGVTHLARDCPNKGNRFGVAANGGGYGINEQPRRSQVTKLISGDDL 240

Query: 241 EDDFTIEDDSK-DFEGDPASENPAKVKKKQGPKVL 274
           +DDF IE+D K   + + ++ +PAKVKKK+GPKV+
Sbjct: 241 DDDFMIEEDDKVKNDSEKSAGDPAKVKKKEGPKVV 266
[Close]
BLAST of Spo04425.1 vs. UniProtKB/TrEMBL
Match: W9SNN0_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_006495 PE=4 SV=1)

HSP 1 Score: 335.5 bits (859), Expect = 6.300e-89
Identity = 172/286 (60.14%), Postives = 207/286 (72.38%), Query Frame = 1 

		  

Query: 1   MVSKRQKEAKKKFKQENPGLFPKPEPTPPKDPTRKKKKKPDFKKSKPNHPKTLNDSSKPS 60
           MVSKRQKEA+K+FK  NP LFPKPEPTPPKDP +KKKK    +  K   PK+  D++K  
Sbjct: 1   MVSKRQKEARKRFKVANPELFPKPEPTPPKDPNKKKKKSKFKRDEKKADPKSRGDATKKL 60

Query: 61  FTRKPSFTKKPLRVPGLKIGDCCFICKDVHHIAKSCPEKAQWEKNKICLCCRQRGHSMKN 120
              K    K PLRVPG+K G+ CFICK   HIAK CPEKAQWEKNKICL CR RGHS+KN
Sbjct: 61  I--KKGLRKHPLRVPGMKPGESCFICKAKDHIAKLCPEKAQWEKNKICLLCRSRGHSLKN 120

Query: 121 CPNKDGEFVEAAGQKLCYNCGENGHSLSQCPQPLQDGGTKFALCFICNERGHLSKNCPKS 180
           CPNK+ + V+   +KLCYNCG++GHSL +CPQPLQ+GGTKFA CFIC E GHLSKNCP++
Sbjct: 121 CPNKNDKTVD---KKLCYNCGQSGHSLDKCPQPLQEGGTKFATCFICKESGHLSKNCPQN 180

Query: 181 THGIYPKGGCCKICGGVNHLARDCPNKGNSYGSAS-RGGRVSIL--EQSQSKVTKLYSGD 240
           THGIYPKGGCCKICGGV HLA+DCPNKGN   +AS +  R   +  ++ + +VTK +SGD
Sbjct: 181 THGIYPKGGCCKICGGVTHLAKDCPNKGNRESAASDKASRTFSISDDRPRGQVTKFFSGD 240

Query: 241 DLEDDFTIED----------DSKDFEGDPASENPAKVKKKQGPKVL 274
           DLEDDF  +D          + K   G  + E+  K +KKQGPKV+
Sbjct: 241 DLEDDFMADDTYGGKKDKSTEPKAGSGSNSQESNLKSEKKQGPKVV 281
[Close]
BLAST of Spo04425.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QX66_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_131260 PE=4 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 5.900e-87
Identity = 155/156 (99.36%), Postives = 156/156 (100.00%), Query Frame = 1 

		  

Query: 1   MVSKRQKEAKKKFKQENPGLFPKPEPTPPKDPTRKKKKKPDFKKSKPNHPKTLNDSSKPS 60
           MVSKRQKEAKKKFKQENPGLFPKPEPTPPKDPTRKKKKKPDFKKSKPNHPKTLNDSSKPS
Sbjct: 1   MVSKRQKEAKKKFKQENPGLFPKPEPTPPKDPTRKKKKKPDFKKSKPNHPKTLNDSSKPS 60

Query: 61  FTRKPSFTKKPLRVPGLKIGDCCFICKDVHHIAKSCPEKAQWEKNKICLCCRQRGHSMKN 120
           FTRKPSFTKKPLRVPGLKIGDCCFICKDVHHIAK+CPEKAQWEKNKICLCCRQRGHSMKN
Sbjct: 61  FTRKPSFTKKPLRVPGLKIGDCCFICKDVHHIAKNCPEKAQWEKNKICLCCRQRGHSMKN 120

Query: 121 CPNKDGEFVEAAGQKLCYNCGENGHSLSQCPQPLQD 157
           CPNKDGEFVEAAGQKLCYNCGENGHSLSQCPQPLQD
Sbjct: 121 CPNKDGEFVEAAGQKLCYNCGENGHSLSQCPQPLQD 156
[Close]
BLAST of Spo04425.1 vs. UniProtKB/TrEMBL
Match: B9R9B0_RICCO (Actin depolymerizing factor, putative OS=Ricinus communis GN=RCOM_1495930 PE=4 SV=1)

HSP 1 Score: 320.1 bits (819), Expect = 2.700e-84
Identity = 163/274 (59.49%), Postives = 199/274 (72.63%), Query Frame = 1 

		  

Query: 1   MVSKRQKEAKKKFKQENPGLFPKPEPTPPKDPTRKKKKKPDFKKSKPNHPKTLNDSSKPS 60
           MVS+RQ+ A+KKF+QE+P LFPKPEPTPPKDP +KKKK     K K +  K   D ++P+
Sbjct: 1   MVSQRQRLARKKFRQEHPELFPKPEPTPPKDPNKKKKKNNTKFKRKRSESKESKDPNEPN 60

Query: 61  FTRKPSFTKKPLRVPGLKIGDCCFICKDVHHIAKSCPEKAQWEKNKICLCCRQRGHSMKN 120
              K  F K PLRVPG+K G+ CFICK   HIAK CP+KA+WE+NKICL CRQRGHS+K 
Sbjct: 61  ---KKRFKKHPLRVPGMKPGESCFICKAKDHIAKLCPQKAEWERNKICLLCRQRGHSLKR 120

Query: 121 CPNKDGEFVEAAGQKLCYNCGENGHSLSQCPQPLQDGGTKFALCFICNERGHLSKNCPKS 180
           CPNK  E V+   +KLCYNCGE GHSLS CPQPL++GGTK+A CFICNE GHLSK+CP++
Sbjct: 121 CPNKKDENVD---RKLCYNCGETGHSLSNCPQPLKNGGTKYANCFICNESGHLSKDCPQN 180

Query: 181 THGIYPKGGCCKICGGVNHLARDCPNKGNSYGSASRGGRVSILEQSQSKVTKLYSGDDLE 240
           T GIYPKGGCCKICGGV HLARDCP KG     A+ G  +   E+   K+TK  SGD+L+
Sbjct: 181 TRGIYPKGGCCKICGGVTHLARDCPEKGKRGSLAASGEVIEKEERQTPKLTKFISGDELD 240

Query: 241 DDFTIEDD--SKDFEGDPASENPAKVKKKQGPKV 273
           DDF  E+    +   G  + +  AK+KKKQG K+
Sbjct: 241 DDFMTENTYAVEKERGSDSKDGHAKLKKKQGHKL 268
[Close]
BLAST of Spo04425.1 vs. UniProtKB/TrEMBL
Match: B9ID89_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0015s13070g PE=4 SV=2)

HSP 1 Score: 317.4 bits (812), Expect = 1.800e-83
Identity = 166/283 (58.66%), Postives = 198/283 (69.96%), Query Frame = 1 

		  

Query: 1   MVSKRQKEAKKKFKQENPGLFPKPEPTPPKDPTR-KKKKKPDFKKSKPNHPKTLNDSSKP 60
           MVSKRQK A+K +K+++P LFPKPEPTPP DP + KKKKK    K K + PK       P
Sbjct: 98  MVSKRQKLARKIYKEDHPELFPKPEPTPPNDPNKMKKKKKKSLFKRKNSDPKD------P 157

Query: 61  SFTRKPSFTKKPLRVPGLKIGDCCFICKDVHHIAKSCPEKAQWEKNKICLCCRQRGHSMK 120
           +   K  F K+PLRVPG+K GD CFICK   HIAK CP+K +WEKNKICL CR RGHS+K
Sbjct: 158 NKANKKGFRKQPLRVPGMKPGDSCFICKAKDHIAKLCPQKDEWEKNKICLLCRHRGHSLK 217

Query: 121 NCPNKDGEFVEAAGQKLCYNCGENGHSLSQCPQPLQDGGTKFALCFICNERGHLSKNCPK 180
            CP K+ E ++   QKLCYNCGE GHSLSQCPQP +DGGTKFA CFICNERGHLSK+CPK
Sbjct: 218 RCPKKNDETMD---QKLCYNCGETGHSLSQCPQPREDGGTKFANCFICNERGHLSKDCPK 277

Query: 181 STHGIYPKGGCCKICGGVNHLARDCPNKGNSYGSASRGGRVSILEQSQSKVTKLYSGDDL 240
           +T GIYPKGGCCK+CGGV HLARDCP+KG    +A   G +    +   +VTK  SGD+L
Sbjct: 278 NTRGIYPKGGCCKLCGGVTHLARDCPDKGKRGDAAFGRGAIGREVRPTGRVTKFVSGDEL 337

Query: 241 EDDFTIE-------DDSKDFEGDP--ASENPAKVKKKQGPKVL 274
           +DDF  E       D S D +  P  + +   K KKKQGPK++
Sbjct: 338 DDDFMTENMYSIPKDKSTDSKVVPPDSKDGHVKSKKKQGPKIV 371
[Close]
BLAST of Spo04425.1 vs. ExPASy Swiss-Prot
Match: YL92_SCHPO (Uncharacterized protein C683.02c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC683.02c PE=3 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 2.900e-23
Identity = 47/104 (45.19%), Postives = 63/104 (60.58%), Query Frame = 1 

		  

Query: 101 QWEKNKICLCCRQRGHSMKNCPNKDGEFVEAAGQKLCYNCGENGHSLSQCPQPLQDGGTK 160
           Q  ++K C  CRQ+GH +++CP             +C+ CG   HSL+ C +    G  K
Sbjct: 72  QRNRDKFCFACRQQGHIVQDCPEAKDNV------SICFRCGSKEHSLNACSKK---GPLK 131

Query: 161 FALCFICNERGHLSKNCPKSTHGIYPKGGCCKICGGVNHLARDC 205
           FA CFIC+E GHLS  C ++  G+YPKGGCCK C  V+HLA+DC
Sbjct: 132 FAKCFICHENGHLSGQCEQNPKGLYPKGGCCKFCSSVHHLAKDC 166
[Close]
BLAST of Spo04425.1 vs. ExPASy Swiss-Prot
Match: ZCHC9_HUMAN (Zinc finger CCHC domain-containing protein 9 OS=Homo sapiens GN=ZCCHC9 PE=1 SV=2)

HSP 1 Score: 103.6 bits (257), Expect = 3.600e-21
Identity = 48/130 (36.92%), Postives = 68/130 (52.31%), Query Frame = 1 

		  

Query: 87  KDVHHIAKSCPEKAQWEKNKICLCCRQRGHSMKNCP----NKDGEFVEAAGQKLCYNCGE 146
           KD     +    +A  +   +C  CR+ GH + +CP    N+D       G  +CY CG 
Sbjct: 109 KDSRREGRRLKRQAAKKNAMVCFHCRKPGHGIADCPAALENQD------MGTGICYRCGS 168

Query: 147 NGHSLSQCPQPLQD--GGTKFALCFICNERGHLSKNCPKSTHGIYPKGGCCKICGGVNHL 206
             H +++C   +    G   FA CF+C E GHLS++CP +  G+Y  GG CK+CG V HL
Sbjct: 169 TEHEITKCKAKVDPALGEFPFAKCFVCGEMGHLSRSCPDNPKGLYADGGGCKLCGSVEHL 228

Query: 207 ARDCPNKGNS 211
            +DCP   NS
Sbjct: 229 KKDCPESQNS 232
[Close]
BLAST of Spo04425.1 vs. ExPASy Swiss-Prot
Match: ZCHC9_MOUSE (Zinc finger CCHC domain-containing protein 9 OS=Mus musculus GN=Zcchc9 PE=2 SV=2)

HSP 1 Score: 102.4 bits (254), Expect = 8.000e-21
Identity = 47/126 (37.30%), Postives = 65/126 (51.59%), Query Frame = 1 

		  

Query: 87  KDVHHIAKSCPEKAQWEKNKICLCCRQRGHSMKNCPNKDGEFVEAAGQKLCYNCGENGHS 146
           KD     +    +A  +   +C  CRQ GH + +CP       +  G  +CY CG   H 
Sbjct: 109 KDSRREGRRLKRQAAKKNAMVCFHCRQPGHGIADCPAVLES--QDMGTGICYRCGSTEHE 168

Query: 147 LSQCPQPLQD--GGTKFALCFICNERGHLSKNCPKSTHGIYPKGGCCKICGGVNHLARDC 206
           +S+C   +    G   FA CF+C E GHLS++CP +T G+Y  GG CK+CG V H  +DC
Sbjct: 169 MSKCRANVDPALGEFPFAKCFVCGEMGHLSRSCPDNTKGVYADGGSCKLCGSVEHFKKDC 228

Query: 207 PNKGNS 211
               NS
Sbjct: 229 RENQNS 232
[Close]
BLAST of Spo04425.1 vs. ExPASy Swiss-Prot
Match: HEXP_LEIMA (DNA-binding protein HEXBP OS=Leishmania major GN=HEXBP PE=3 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 3.400e-19
Identity = 51/158 (32.28%), Postives = 66/158 (41.77%), Query Frame = 1 

		  

Query: 75  PGLKIGDCCFICKDVHHIAKSCPEKAQW--EKNKICLCCRQRGHSMKNCPNKDGEFVEAA 134
           P  +    C  C    H A+ CPE      E++  C  C + GH  + CPN+      AA
Sbjct: 10  PRTESSTSCRNCGKEGHYARECPEADSKGDERSTTCFRCGEEGHMSRECPNEARS--GAA 69

Query: 135 GQKLCYNCGENGHSLSQCPQPLQDGGTKFALCFICNERGHLSKNCPKS------------ 194
           G   C+ CGE GH    CP   + G  K   C+ C + GHLS++CP S            
Sbjct: 70  GAMTCFRCGEAGHMSRDCPNSAKPGAAKGFECYKCGQEGHLSRDCPSSQGGSRGGYGQKR 129

Query: 195 ----THGIYPKGGCCKICGGVNHLARDCPNKGNSYGSA 215
                 G Y     C  CG   H++RDCPN    Y  A
Sbjct: 130 GRSGAQGGYSGDRTCYKCGDAGHISRDCPNGQGGYSGA 165
[Close]
BLAST of Spo04425.1 vs. ExPASy Swiss-Prot
Match: Y3800_DROME (CCHC-type zinc finger protein CG3800 OS=Drosophila melanogaster GN=CG3800 PE=1 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 1.200e-16
Identity = 42/126 (33.33%), Postives = 59/126 (46.83%), Query Frame = 1 

		  

Query: 83  CFICKDVHHIAKSCPEKAQWEKNKICLCCRQRGHSMKNCPNKDGEFVEAAGQKLCYNCGE 142
           C+ C    H A++CPE+A+      C  C   GH  K+C   D           CY C +
Sbjct: 57  CYKCNQFGHFARACPEEAER-----CYRCNGIGHISKDCTQADNP--------TCYRCNK 116

Query: 143 NGHSLSQCPQPLQDGGTKFALCFICNERGHLSKNCPKSTHGIYPKGGCCKICGGVNHLAR 202
            GH +  CP+ + + G     C+ CN  GH+SKNCP+++         C  CG   HL R
Sbjct: 117 TGHWVRNCPEAVNERGPTNVSCYKCNRTGHISKNCPETSK-------TCYGCGKSGHLRR 162

Query: 203 DCPNKG 209
           +C  KG
Sbjct: 177 ECDEKG 162
[Close]
BLAST of Spo04425.1 vs. TAIR (Arabidopsis)
Match: AT5G52380.1 (VASCULAR-RELATED NAC-DOMAIN 6)

HSP 1 Score: 295.4 bits (755), Expect = 3.600e-80
Identity = 154/277 (55.60%), Postives = 200/277 (72.20%), Query Frame = 1 

		  

Query: 1   MVSKRQKEAKKKFKQENPGLFPKPEPTPPKDPTRKKKKKPDFKKSKPNHPKTLNDSSKPS 60
           MV++R++ A+K++K+ NP LFPK EPTPPKDP +KKKKK  FKK KP      + + +P 
Sbjct: 1   MVNQRRRLAQKRYKEANPELFPKAEPTPPKDPNKKKKKKSLFKKKKPG-----SSTDRPQ 60

Query: 61  FTRKPSFTKKPLRVPGLKIGDCCFICKDVHHIAKSCPEKAQWEKNKICLCCRQRGHSMKN 120
             R  S T+ PLRVPG+K G+ CFIC    HIAK CPEK++WE+NKICL CR+RGHS+KN
Sbjct: 61  --RTGSSTRHPLRVPGMKPGEGCFICHSKTHIAKLCPEKSEWERNKICLQCRRRGHSLKN 120

Query: 121 CPNKDGEFVEAAGQKLCYNCGENGHSLSQCPQPLQDGGTKFALCFICNERGHLSKNCPKS 180
           CP K+ E  E   +KLCYNCG+ GHSLS CP P++DGGTKFA CFIC  +GH+SKNCP++
Sbjct: 121 CPEKNNESSE---KKLCYNCGDTGHSLSHCPYPMEDGGTKFASCFICKGQGHISKNCPEN 180

Query: 181 THGIYPKGGCCKICGGVNHLARDCPNKGNSYGSASRGGRVSILEQS-QSKVTKLYSGDDL 240
            HGIYP GGCCK+CG V HL +DCP+K N   +  +  + S  + + + K+TK +SGDDL
Sbjct: 181 KHGIYPMGGCCKVCGSVAHLVKDCPDKFNQESAQPK--KTSRFDATPRGKLTK-FSGDDL 240

Query: 241 EDDFTIEDDS--KDFEGDPASENPAKV-KKKQGPKVL 274
           EDDFT E  S  K    D +++N  +V KKKQGPK++
Sbjct: 241 EDDFTEEPKSSKKINTSDDSAQNSVEVKKKKQGPKIV 264
[Close]
BLAST of Spo04425.1 vs. TAIR (Arabidopsis)
Match: AT3G43590.1 (zinc knuckle (CCHC-type) family protein)

HSP 1 Score: 65.5 bits (158), Expect = 6.100e-11
Identity = 36/122 (29.51%), Postives = 52/122 (42.62%), Query Frame = 1 

		  

Query: 83  CFICKDVHHIAKSCPEKAQWEKNKICLCCRQRGHSMKNCPNKDGEFVEAAGQKLCYNCGE 142
           CFIC  + H AK C       K   C  C++ GH  K+CP+K   +   +   +C  CG+
Sbjct: 191 CFICGSLEHGAKQC------SKGHDCYICKKTGHRAKDCPDK---YKNGSKGAVCLRCGD 250

Query: 143 NGHSLSQCPQPLQDGGTKFALCFICNERGHLSKNCPKSTHGIYPKGGCCKICGGVNHLAR 202
            GH +  C         K   C+IC   GHL   C +  + +     C + CG + H   
Sbjct: 251 FGHDMILCKYEYSKEDLKDVQCYICKSFGHLC--CVEPGNSLSWAVSCYR-CGQLGHSGL 300

Query: 203 DC 205
            C
Sbjct: 311 AC 300
[Close]
BLAST of Spo04425.1 vs. TAIR (Arabidopsis)
Match: AT4G36020.1 (cold shock domain protein 1)

HSP 1 Score: 58.2 bits (139), Expect = 9.800e-9
Identity = 40/117 (34.19%), Postives = 52/117 (44.44%), Query Frame = 1 

		  

Query: 115 GHSMKNCPNKDGEFVE-AAGQKLCYNCGENGHSLSQCPQPLQDGGTKFAL-----CFICN 174
           G S+K   N  G       G   CYNCGE GH    C      GG +        C+ C 
Sbjct: 79  GGSLKKENNSRGNGARRGGGGSGCYNCGELGHISKDCGIGGGGGGGERRSRGGEGCYNCG 138

Query: 175 ERGHLSKNCPKSTHGIY---PKGGC--CKICGGVNHLARDCPNKGNSYGSASRGGRV 221
           + GH +++C  + +G      KGG   C  CG V H+ARDC  K  S G+  + G V
Sbjct: 139 DTGHFARDCTSAGNGDQRGATKGGNDGCYTCGDVGHVARDCTQK--SVGNGDQRGAV 193
The following BLAST results are available for this feature:
BLAST of Spo04425.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|731322418|ref|XP_010671878.1|3.3e-10772.7PREDICTED: DNA-binding protein... [more]
gi|703144672|ref|XP_010108340.1|9.0e-8960.1Uncharacterized protein L484_0... [more]
gi|723679637|ref|XP_010317605.1|2.9e-8761.4PREDICTED: uncharacterized pro... [more]
gi|970014363|ref|XP_015068170.1|8.4e-8761.4PREDICTED: uncharacterized pro... [more]
gi|902191459|gb|KNA11855.1|8.4e-8799.3hypothetical protein SOVF_1312... [more]
back to top
BLAST of Spo04425.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0J8FKF2_BETVU2.3e-10772.7Uncharacterized protein OS=Bet... [more]
W9SNN0_9ROSA6.3e-8960.1Uncharacterized protein OS=Mor... [more]
A0A0K9QX66_SPIOL5.9e-8799.3Uncharacterized protein (Fragm... [more]
B9R9B0_RICCO2.7e-8459.4Actin depolymerizing factor, p... [more]
B9ID89_POPTR1.8e-8358.6Uncharacterized protein OS=Pop... [more]
back to top
BLAST of Spo04425.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
YL92_SCHPO2.9e-2345.1Uncharacterized protein C683.0... [more]
ZCHC9_HUMAN3.6e-2136.9Zinc finger CCHC domain-contai... [more]
ZCHC9_MOUSE8.0e-2137.3Zinc finger CCHC domain-contai... [more]
HEXP_LEIMA3.4e-1932.2DNA-binding protein HEXBP OS=L... [more]
Y3800_DROME1.2e-1633.3CCHC-type zinc finger protein ... [more]
back to top
BLAST of Spo04425.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 3
Match NameE-valueIdentityDescription
AT5G52380.13.6e-8055.6VASCULAR-RELATED NAC-DOMAIN 6[more]
AT3G43590.16.1e-1129.5zinc knuckle (CCHC-type) famil... [more]
AT4G36020.19.8e-934.1cold shock domain protein 1[more]
back to top
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001878Zinc finger, CCHC-typeGENE3D4.10.60.10coord: 170..207
score: 8.6E-12coord: 145..169
score: 4.9E-11coord: 83..116
score: 9.4E-7coord: 117..144
score: 2.
IPR001878Zinc finger, CCHC-typePFAMPF00098zf-CCHCcoord: 190..206
score: 0.0017coord: 136..152
score: 1.4E-5coord: 164..179
score: 3.
IPR001878Zinc finger, CCHC-typeSMARTSM00343c2hcfinal6coord: 136..152
score: 0.0013coord: 190..206
score: 0.014coord: 163..179
score: 3.9E-4coord: 82..98
score: 0.064coord: 107..123
score:
IPR001878Zinc finger, CCHC-typePROFILEPS50158ZF_CCHCcoord: 137..152
score: 10.23coord: 191..206
score: 8.697coord: 164..179
score: 9
IPR001878Zinc finger, CCHC-typeunknownSSF57756Retrovirus zinc finger-like domainscoord: 130..181
score: 5.76E-11coord: 82..124
score: 3.8
IPR025836Zinc knuckle CX2CX4HX4CPFAMPF14392zf-CCHC_4coord: 106..122
score: 0.16coord: 78..97
score:
NoneNo IPR availablePANTHERPTHR23002ZINC FINGER CCHC DOMAIN CONTAINING PROTEINcoord: 1..209
score: 1.4
NoneNo IPR availablePANTHERPTHR23002:SF73SUBFAMILY NOT NAMEDcoord: 1..209
score: 1.4

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009987 cellular process
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0033591 response to L-ascorbic acid
biological_process GO:0009744 response to sucrose
biological_process GO:0010043 response to zinc ion
biological_process GO:0042793 plastid transcription
biological_process GO:0009773 photosynthetic electron transport in photosystem I
biological_process GO:0009664 plant-type cell wall organization
biological_process GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process GO:0046686 response to cadmium ion
biological_process GO:0042742 defense response to bacterium
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0009231 riboflavin biosynthetic process
biological_process GO:0009902 chloroplast relocation
biological_process GO:0015995 chlorophyll biosynthetic process
biological_process GO:0006508 proteolysis
biological_process GO:0046680 response to DDT
biological_process GO:0009646 response to absence of light
biological_process GO:0006468 protein phosphorylation
biological_process GO:0042908 xenobiotic transport
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0006855 drug transmembrane transport
biological_process GO:0019761 glucosinolate biosynthetic process
biological_process GO:0000023 maltose metabolic process
biological_process GO:0019252 starch biosynthetic process
biological_process GO:0006810 transport
biological_process GO:0006013 mannose metabolic process
biological_process GO:0010027 thylakoid membrane organization
biological_process GO:0006364 rRNA processing
biological_process GO:0006000 fructose metabolic process
biological_process GO:0009298 GDP-mannose biosynthetic process
biological_process GO:0019853 L-ascorbic acid biosynthetic process
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0005840 ribosome
cellular_component GO:0005634 nucleus
cellular_component GO:0016020 membrane
cellular_component GO:0005737 cytoplasm
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0009349 riboflavin synthase complex
cellular_component GO:0005622 intracellular
cellular_component GO:0005576 extracellular region
cellular_component GO:0005618 cell wall
cellular_component GO:0009507 chloroplast
molecular_function GO:0005509 calcium ion binding
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0003723 RNA binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0005215 transporter activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0008559 xenobiotic transmembrane transporting ATPase activity
molecular_function GO:0004672 protein kinase activity
molecular_function GO:0004476 mannose-6-phosphate isomerase activity
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0008233 peptidase activity
molecular_function GO:0004746 riboflavin synthase activity
molecular_function GO:0004674 protein serine/threonine kinase activity
RNA-Seq Expression