Spo04316 (gene)

Overview
NameSpo04316
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
Locationchr5 : 56197215 .. 56203227 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTCCTATCATCTTCAGGTTACATACTATAGTCCTATGACCCCCTAGTCCCCTACCAAACCATGAACTCATCTCATTCCCTTTCTGGCAACCATTCCCCACCAAATTGCAGACCTAATATTGACCACCATAACCACCACAAATTCTCTGTCAAACATCAAGAACCAACTTCACTAGAGTCACTACCCCTTCCCATAAGCCCTGCCAAAGTGCCAAATACCAAGAATTAAGTACCATCTCCCCTTCTCAACAAATCAATTATAGACAAAATGAGACGTAGCAGAAACTAAGACAGAAATCATTACAACCAAACTATAATTTATTCAACTACGGTATACAATGATAGGTTGTGGCAAACATGTATGCAATAGTTCGTTCAAGATTGATATGTCGTAAACATGTAAGGCCAGAGAGATCTATATTACCACATTGCACCATGTCACCAACATTCACCAACATAGATCCATAGAAAATGGAATAGCCAACTAAAGATATATTAAAAATAAAATATACACATGATTATTGCATAATTATTTAATTTCTTTCCAATCAACAACATCATTCTGCAAGATAAGCCCAGTTTTGACTTCTGAGGTATCAAGACTGAAACTGGTAATCTATTAACACTTCGACCTTCAAACTGATTAAAATCAAGAAGGCCCGTGACCATACATACTCAAAAACCTGAGGTGAGATAATTGTTCAAGCAGAGCATCATAAACTTGAAAGGCAGGAACCTGCGAACTTCTCTCTCAATGGATACGGCTCCGAAAAAAGGCCAAACGACTAATCCTAATCCTAATTCGTCCTCAAAATTCTGATTCAAGCCCAACTTAAACCCAATTCTCGTCAAACTTTACCTCCCCTGGTGTAGACACCTACTTTTGTCCCCATTCCAGAAAGGGAAGGTTCGATGATGAGAACATAAATCTCCCCTTGGCAACGCATCTCCTATAAAATAACGAATCTCAAATCACCCTTTCATTTCAGCCAAAGCTTCCATTTATAGAAACCTGCTAAAAATAGTAGCTGCCGTAAAAGGTAATTGCTAAAAGTAGTAAGAATAAAAAGATAGAAACCTGTCAGAATTAGGTGTTGCACTCCAACATAAATCCTAAAAGAGATAGAAATTGTAAAAGGAATTCTATTCCTATCGCAATTCGATAAAAGAGTTAACGTATTAATTAACACTACTACATTTTAAGGCTTATTGTAACAATAAAATTGTAACACTCCATTTAGTCGTTACATAAAAGAGGTATATTGTAACGGGTCTATAATGTTTCATGTAAAATATAAGATATTGTATCAGGTAGCGTTGGATGTGTTACATTTGATTTAAATCCGTTACAATAGACAATACCTATTGTAATGGCTTATATGTAATGTAACGACAATCGAAAATGAGGCACGCGCTATTTTATTTCGAGTGCGCGGGACATTTTAGCAAACCAAAATTTCACAATTAATTTGAAAGCCCTCTTTTCTTTTTCACTCTTTTTGTCCTAAACCCTAAGGCCCTATTTGGTTCGATATTAGTAAAGGAAGGGAAGAGAAGAGAAAGGAAGGGAAGAGAAAAGAAGAGAAAGGAAAGGAAATAAAATATATTTTCCCATGTTTGGTACGATGAAAGAAAATGATAGGAATCTCATGTTTGGTACAACATTAGTAAAGGAAGAGAAGGGAAGGAAAGAAAAAAACGTGTGTTTAAGTTTTAATATTTTGTTTGACAGATTTAATTTTTTCTTTCCTTCCAAATTCCTCCAATTTTGGGAGGAAAGAAAAGTGAAACTTTTATACAATGAGGTTTCCTTCCAATTCCCTTCATTTCCTTTCACTTCCCATATAATTTTTTGAACCAAATATAAGAAACATTATTTTTCCTTCCCTTTCTTTTCTTTTCCTTCCAATTCCTCCCAACCAAATAAAGCCTAACTATTGGAATTCTACTTTTTTTTTCCTGTTAAAACACTTCCATTTTTCGCTCAAAAAATTGTTGCTGAAATCTCTCTACTCAAATCTGCAAATCAATCAGCAAAGAAATTCAATTTCCTCTCTTTTCCTTGAAGGTGTCGATCTAGCCTCGGTTGCTAAGTTCTTATAGCTTTGGTGAAGGTGATTCGGTTGATAAATTCACATAAATGGTTTAATAATTTGGTTTGCTTTTCGGCCGTCAATCATCTAGGTAAACCCCCTCTTCATGCGCTACTCCCCCTTCCCTAAAATCTCTCTACTCCATTTTTCTACTCTCTCGCCTCTAATTTTGTAACTGTTGATTCCCGTATTTTCCAGCTCCTTCACTTCAAATTAATTCTAAAGGTAAGTGTTTATCCTCTTGCTTACTATTTAATTACAATTCCATTTGTGGGTGCTTTGTTTACCGTCTAATCTTCATTTGTTCTTGGTAGATGATGATGATGTAGTTGACTTTTTGTGTGGGTTTTAATATTTTGGATATGAAATCCTGAATTGAAAATTGATTTTTTATTGGTTTTGAAATTTTGTTCATATTTTGGGTTCTGATCTCGGTTATTGGCAATTTCAAGGGTTTATTAAATTGGGTATGTTGTTTAAAGTTATTTAGAATTTCGTTCATGTTGGTTTCTTTGAAAAATAGGTAACCTTTTGTTTTTCCCCCAATATTTTGATAATATAATTCTATGTTTAGTGATTTTTTTTAAGAAAGTAAATTGGGTATTATTGAAGATCGTCTAGATATTCCTAATTAATATGTAAATTACACCGAATTTGGTATAACTTGTATAATTTTATGGTGATTGTATTGATTAAACGGAATAAAATTTTCCTATTTTTATGAACGAATTCGGTTGTTTTATTTTGCTGGGTATTTCTTATTTAAAGGGATTGATATGTAAAATGAGTCTGTAAATATGCCATATATACATTTTTCAATTACTGTCAGCTATAATAGTGAGGTTAAGTCGTTGAGTTTCTTGTCATTAATATTTTGATCAGTGGATAGAATGAACACGTGCAAAAGCTAGTAGAATCCTTAAGGAAGTAGAAGTATAAAATGAAAAGGCACATATCTGTTGTTTAGTTGGAGATGATATAAACATGGTCAAACTTCTCTATACTCTACATACAAGCAGCAGGGTATAACAATGTTATTATGTTGTCATACTGTGGTTTGTAAACAAACAGTGAACCCCTATTTAAGGAGTTGTGGAAATGGTGTGACCAACATAATTCTTCATTGAGATTCAGAGGTAATTAGACTGTTATACTCTCCTGCTTGTATGTAGAGTATAGAGAAGCTGCAATGAAGTCCTATGTCAACTGGACTACGACTGGAGTCTCCATAGGTGAAATTACAGTTGAGATCGCTAAGGTTTATATGGTCTCTAGAGTAAAAGTGTGATGCCTAAAAAAGTTTCTTAGTTTATAGACATTAATTAGTTTTTTTACTTGTCTGTCAGGAGTTTATCTTATAGACATTAATTAAATGGTCTCTAGAGTAAAATTGTGATGCCTAAAAGGTAATGCTTTATGTTTTGACTCAAACTCCCTTATTGACCAACCAAAGTACAAACTAGCTACTTACTTACAAGCCACAACCAAAAGTTGAGTTAAGCCTAACTTTGGGGTCTCACCTTTCCCTTTTTTCACCGTTTGGAACCCGAACTTTTTATTTTCACCCTCTAGGACCTCTAAAGCATTTTCCAGCCTAAATTAACCCATGAATGTAAAAGTTTAGTCCCCTTAATTAAAAGGTTAGACCCTTAGTTAAAAATACACGTGGCCCATTATTATTCTTTATTGTGACTTTATTATGTTGCTTTACTGTATTTTTTATTTTTGGTGTTGGATGATTATAAGTATGGTGAATTTTGGTGTTGGTGATTGATTAAAATTAGAGCAGTAGCAGAGTTTAATAGAGCAAGCCGCTAACGGCTTTATTTTGTAAACATGAGGGATATTTTACTTATATCAAACTTTTAGAAATCATTTAATATTTTAGTTAGTTTTTTTATTTTTAATATTCATGTTGTGGTTAAAGGTGAGTTAAAATAGAGTTGAGGTTCTAAAAGGTGAAAAAAAAAGTTGTAGGTCCTAAAGGGTGAAAAAATGAAAAGGTGAGATCCCAAACATTAACTTAACTCACCAAAAGTTTACTATCTCTAAAACTAGTCAAGCTAGCAAAACTGACAGCCAGCCAGATTAAAGACATGCTTCATATAATTAAAAAGACAATGTAAAAGCAGAAATTATAAAGATGAGTATTAACTAACGTAAACTGACTTTAGGAGGCACCAATTGTCAACTCTCAGACCAGAAAAAGGCTCTACTTAAAAAGAATACTTTAAAAAGGAAAGATTTTAAAAACAAAATTTATACTCTTTATATGTTTTGGAGTAAAGGAATATTTATGGAAAAGAGAGGTTTCTCGCGAATCGAACCTGGCTCTAAATTGTTTATTGAATTTGTATATGAGCTTGTATATTTTGTTAAATTATTGGACATGTTCTACTATCAGACTATGGAATGGTCCTCCATAATGGATGCTTATCTTGGTTGGGGTAACAAATTAGTAAGGATGATGACAATATTTATCTAGTTTGAATGATTGGTAATGTTTTGAATATGTTATATTTCTTTGATGCTTGTATACTATGCTAATAGTAAATTCTTTTAAATTTTAAAAGGGTGTTAGACAAATTTGTCAAGCTTAACAAAAAGTACTACATTAGCATCACTCGACAATACGACCGATCCTTCATCAGGTATATGTTTTCCTTTTTCTTTTTTCTCTTTATATATATTTTTTAAATAAATAGATTTATGTTATATGGTAGACAATTCTGAAGTGTTCACAAAATTTGTGCACAACAATAGTTGTATTGGTTATTTTATCTTACTTCCAAATTTCAACTTGTTTGTTTCTATGTGAGATTTCATGATAGTAATAGTTTAACTACATGCTATTTTACTTGGGTTTAATAGTGCTAACACCATTAAATATGCAATTTCATATGTTTGAGAAAAATTTACACTGGATAGAGTATTATATAACCAAAAATGAATAAAGTAACCTAGAAAGTACATGTAACAAAAACGTTTTATGTGTTATTCTTAACTTTAGGTCATGGATTGTGGGAAGAAAGAGTGGTGGAAATTTCCTAGATGGTCAAATGAATACGAAAATGGAGTTGATGACTATTTAGTCAAAGCTTTTGAAACTGAAGCACAAGGAGATCAAATATGTTGCCCATGTAACAAGTGTTGTCATCGTTACTGGTATCATAGACATGTGGTTAGGGACCATATCATTTGTAAAGGTTTTAAACCTAGATCGGAAAAACACAATTCCGAGTCAATGATCAATGAAGAAATGCCAGTATTTGATTATGGGGTTCAACCACAGTTCAACGATGATATAGACAGGTTGTTGAATGATACTTTTAGAGGGGGGCCAGATGAGGAAACAGAAAAGTTTTATAAGTTAATTGAGAAGGGTCAACAAGAATCATATCCAGGTTGCAAGACTTTTTCTAAACTTGCCTTTACAATCCGATTGTTTCTTTTCAAGTGTGACCATAGATTAAGTAATGTAGCATTTTCTGACTTGTTGGAGTTGATAAAGTGTCTTTTACCTGATGCAAAGTTACCTGATGTAGCTTGTTGTTTGAAGTGATTATGAATTGCTGAAATGAGTATTAAAATTTGAAACTGGAGCAATTATTATCATGTTGTTTACCACTATATTTATGTACTAGGTTAACAGACTTGGACATGGTGTCAAATATAATATACCAATCTACCAAAGAACTTAGAAATTTACTAAAGGTTTTGAATCTCGGGCTGGGATCTGATTCGAGCTCATTCAATCAAGAATCTGAAAGCAACTTGCTAGTGGTTCTTTTTGTTGTTGATAGCATTATTGTTGATAATGTTGTATTTATTTAATGCCTCATAAATTGGAGAAGATGGTGATGTTACAATCTGAGCAACAGGGTGGGGAATCATCTAAAGATCCTTATGATGAAGTGA

mRNA sequence

ATGGTCCTATCATCTTCAGCTTTGGTGAAGGTGATTCGGTTGATAAATTCACATAAATGGTTTAATAATTTGGTTTGCTTTTCGGCCGTCAATCATCTAGCTCCTTCACTTCAAATTAATTCTAAAGAGTATAGAGAAGCTGCAATGAAGTCCTATGTCAACTGGACTACGACTGGAGTCTCCATAGGTGAAATTACAGTTGAGATCGCTAAGAGTAAAATTGTGATGCCTAAAAGGGTGTTAGACAAATTTGTCAAGCTTAACAAAAAGTACTACATTAGCATCACTCGACAATACGACCGATCCTTCATCAGGGTGGGGAATCATCTAAAGATCCTTATGATGAAGTGA

Coding sequence (CDS)

ATGGTCCTATCATCTTCAGCTTTGGTGAAGGTGATTCGGTTGATAAATTCACATAAATGGTTTAATAATTTGGTTTGCTTTTCGGCCGTCAATCATCTAGCTCCTTCACTTCAAATTAATTCTAAAGAGTATAGAGAAGCTGCAATGAAGTCCTATGTCAACTGGACTACGACTGGAGTCTCCATAGGTGAAATTACAGTTGAGATCGCTAAGAGTAAAATTGTGATGCCTAAAAGGGTGTTAGACAAATTTGTCAAGCTTAACAAAAAGTACTACATTAGCATCACTCGACAATACGACCGATCCTTCATCAGGGTGGGGAATCATCTAAAGATCCTTATGATGAAGTGA

Protein sequence

MVLSSSALVKVIRLINSHKWFNNLVCFSAVNHLAPSLQINSKEYREAAMKSYVNWTTTGVSIGEITVEIAKSKIVMPKRVLDKFVKLNKKYYISITRQYDRSFIRVGNHLKILMMK
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo04316.1Spo04316.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo04316.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo04316.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo04316.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo04316.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0005975 carbohydrate metabolic process
biological_process GO:0008152 metabolic process
biological_process GO:0055085 transmembrane transport
biological_process GO:0016102 diterpenoid biosynthetic process
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0006812 cation transport
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0009535 chloroplast thylakoid membrane
molecular_function GO:0008568 microtubule-severing ATPase activity
molecular_function GO:0005516 calmodulin binding
molecular_function GO:0005524 ATP binding
molecular_function GO:0016707 gibberellin 3-beta-dioxygenase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0005506 iron ion binding
molecular_function GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity
molecular_function GO:0008324 cation transmembrane transporter activity
molecular_function GO:0005509 calcium ion binding
molecular_function GO:0008168 methyltransferase activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo269900.76Barchart | Table
Spo172200.74Barchart | Table
Spo084030.73Barchart | Table
Spo238560.73Barchart | Table
Spo124230.73Barchart | Table
Spo034420.73Barchart | Table
Spo049850.72Barchart | Table
Spo027490.72Barchart | Table
Spo101640.71Barchart | Table
Spo148260.70Barchart | Table
Spo013440.70Barchart | Table
Spo048850.70Barchart | Table
Spo133440.70Barchart | Table
Spo239300.70Barchart | Table
Spo115340.69Barchart | Table
Spo056210.69Barchart | Table
Spo177260.69Barchart | Table
Spo125430.69Barchart | Table
Spo143200.68Barchart | Table
Spo016600.68Barchart | Table
Spo149110.68Barchart | Table
Spo214220.68Barchart | Table
Spo142400.68Barchart | Table
Spo018410.67Barchart | Table
Spo150890.67Barchart | Table
Spo076850.67Barchart | Table
Spo183140.67Barchart | Table
Spo264910.67Barchart | Table
Spo015900.67Barchart | Table
Spo074410.67Barchart | Table
Spo144240.67Barchart | Table
Spo223520.67Barchart | Table
Spo088840.67Barchart | Table
Spo001460.66Barchart | Table
Spo060220.66Barchart | Table
Spo078920.66Barchart | Table
Spo082750.66Barchart | Table
Spo031490.66Barchart | Table
Spo092140.66Barchart | Table
Spo023590.66Barchart | Table
Spo109650.66Barchart | Table
Spo112850.66Barchart | Table
Spo113600.66Barchart | Table
Spo020970.66Barchart | Table
Spo149530.66Barchart | Table
Spo166800.66Barchart | Table
Spo181160.66Barchart | Table
Spo218230.66Barchart | Table
Spo246130.66Barchart | Table
Spo231250.65Barchart | Table
Spo149090.65Barchart | Table
Spo054500.65Barchart | Table
Spo245910.65Barchart | Table
Spo036650.65Barchart | Table
Spo039500.65Barchart | Table
Spo267890.65Barchart | Table
Spo161260.65Barchart | Table