Spo04201 (gene)

Overview
NameSpo04201
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionBasic helix-loop-helix family protein
LocationSpoScf_00872 : 172319 .. 175380 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AGTTCTATAACAGTTCACCAATTATAAGTATTCCATCAATCAATTATTTATTACGTCATTTTGGTTTTATATTTAAACCAATCACATTATATATTCGTCGTCTCACTCAACCATAAATCAATTTTCTAAATCATTACAAATTTTGAACCAAAAATACACAGTATATTTCCCAACCATCACATTATTTTGTATGGATGGATTTTACAAATTGTTCGATATCATAAATAACAGAGTGACCCTGAATGACGCAATAAAAGTGTTTTCAACAGCGTAGATGACTATAAATATATAGTGTTTGAAAAAAGTTTTTATAAGTCCAAATATATTTTATGTTATACTATATCTTAAGAAATGGCCAAAAATAGCTTTCAGTATTCAAGTTTACCAGAAGAGGAAACCATGCCTCACCATTTTAATGCTACGAATACAACATCAAGTAGCATGCATTTGCAAGAATTGCCTGCAAATTGTTATGCCTTAGAATTTCAGGAACCTTTTGAAGGTTTTGCAGAATTTGAAGATAAAGCTTCTGCTGCTGATTCTTCTCATAATCACAGGCAAGCCGAGAAGCGGCGCCGCGATCGGATTAACGGGCAGCTTGCTAGGCTTAGGAGGCTCATTCCCAAGTCAGAAAAGGTAATCCAATTAGTTAATTAAGCTTCCTTAATTACTTTTGATATTGTTAGTAAAATACAGTACTGTCTAATTTATTTTACTTAACACATTGTCAGGCAATGATCTACAAAAATTAACTTAAGATTAAATTCTTGCTGATAAAACAATGAATGTTAATTACTACTCTTTTTCTATTTAAGTGTCCACTTTTCAAAAATAGTGTCCACTTTCCATTTTTGGACTACATTTTTTCATACAATTTTCTCACTTTTCCATACACTTTTCCCACTTTTCCATAAATCATGATTGTTTTTTCTTACACATTCTACACTTTTTCCACTCTTCCATCCCCACATACACTTTTATTTGTACTTTATCAATAAACAATTATCTATTTTATCCTTTCCCCAAACAAATAATCACAATTATTGTTTTTCTTAAACACTTTTTATTTTCTTTAATTACCATGAATTTCTCCAAAGTGGACACTTAAATAGAAACAGATGGAGTTTTGTCAATAAAAATAGTTGAATTAAGCAAAGTCATATGTGGTTCGAATTCGCCCATGTAGACTCGGATGCTATTTTTTTTTTTTTATTTTATCATCTTTCGTAGAATTCATCCTAGAACCAAGAACATTTTGTACGTACGACATTGAAAAATATTGTTAGGTCCTCATGAAATACGGATTAACTATTCAATTTGCCTAATTTTTCGTTATGTTTTATTATCAATTCGGCACCTCTTACAAGTCAATCGTTACTGTAAACAATACGATCTGGTTACAGAAGACGACATATTCACTTATTGTAGTACTCGGCATACTCTATAATTCTATATAGCCACTTATGAAGTAATCATGTTTATAAAAGATTAGTGGTTTCTTAATTTCGTGTTCCCAATGATTTTTCTTAGTTTAGACGATCATGGTGTTCATGATGCGTTTCATCATAAGCTTTAGGAGATATGTCAATGTAAGTCAAAGTAGGTCCTTGAAACTTATTAACATGTCTAGATGAATTGTTTTAGATCAATATCATTGCTTACATTATGTTCCATTTTTAAGATTCTCCATAAATCTTCAATATGATGGATTTTGAAACTTTTGGTCTACCACATAGCTAGATAGATAGAGTTGTCAAAAAACGCATGTAGAATCAGTTGCAGATCTTAAACAGTTTTACGAGGGAAAAATGTAAGCAATATAGTATTGAATTTATGCAATTGTACTTAAATTTTAGGGTGTGCCTGCAAAAATGTGTTTTAAAATTGTAAAAATGTGATGTATGATAGTTAAATATATAAAACGACTCGGCTCTACATGCAACGGGGTGTAACTTCTACTCCATATGTCCCTAAAAGATTGTCCCGTTGCAATTCTTTGGGTCAAACTTTGAAACTTTGATCATGAATTATCATTAGCCTATAAAAAAAATATAGTCATGTGGGGTCTTATTAGTAATATCAACTTTATAATTAATGTTTACACTTGTGGAATTAGAGATATTTAAGTTTGTGGAATTTTAAATTGTGTATTTGACACCGTGAAAAGTCAAATGGACGGTCTTTTAGGGACGGTAGGAGTACCAATTAATTGTCCTAATAGAACCTCATGATAGTCCTTTAACTTGTAAAGCAGATGGACAAGGCAGCACTCCTAGAAAGAGTAGTTGAGCAAGTTAAGGATCTAAAGAGAAAAGCATCAGAAATCAGCAAAATCTTTACAATCCCATCAGAAATCGATGACATAACTATTGAATGTCATCGGAAAGAAAATCATCCCAACAACAACAACAACAACAACAACAACAACAACAACAGCAACAACAACAACAACAGCAACATAATGTTTATGAAGGCTACATTATGCTGCGAAGATCGGCCTGACTTAATTCCAGAGCTAATACGGGCACTCAAAGACCTTAACTTGACAGTAATTGGAGCTGATATTGGCTGTTTAGGAGGAAGGATGAAAAGTATTCTATTACTTTACTACAAATTAGATAGTAATAATGATGGTGTTGTTTGTAATCTTAGTGCAATTAAGCAGTCTCTAATGGGTNATTGAATGTCATCGGAAAGAAAATCATCCCAACAACAACAACAACAACAACAACAACAACAACAGCAACAGCAACATAATGTTTATGAAGGCTACATTATGCTGCGAAGATCGGCCTGACTTAATTCCAGAGCTAATACGGGAACTCAAAGACCTTAACTTGACAGTAATTGGAGCTGATATTGGCTGTTTAGGAGGAAGGATGAAAAGTATTCTATTACTTTACTACAAATTAGATAGTAATAATGATGGTGTTGTTTGTAATGTTAGTGCAATTAAGCAGTCTCTAATGGGTGTTTTAACTAGAATTATCTCATGGTCTAGTGCTAGTACTTCCAGTTTTCGTGTTACTAGTAAGAGGCAACGCTTCTTTTTCTCTTCTTAA

mRNA sequence

AGTTCTATAACAGTTCACCAATTATAAGTATTCCATCAATCAATTATTTATTACGTCATTTTGGTTTTATATTTAAACCAATCACATTATATATTCGTCGTCTCACTCAACCATAAATCAATTTTCTAAATCATTACAAATTTTGAACCAAAAATACACAGTATATTTCCCAACCATCACATTATTTTGTATGGATGGATTTTACAAATTGTTCGATATCATAAATAACAGAGTGACCCTGAATGACGCAATAAAAGTGTTTTCAACAGCGTAGATGACTATAAATATATAGTGTTTGAAAAAAGTTTTTATAAGTCCAAATATATTTTATGTTATACTATATCTTAAGAAATGGCCAAAAATAGCTTTCAGTATTCAAGTTTACCAGAAGAGGAAACCATGCCTCACCATTTTAATGCTACGAATACAACATCAAGTAGCATGCATTTGCAAGAATTGCCTGCAAATTGTTATGCCTTAGAATTTCAGGAACCTTTTGAAGGTTTTGCAGAATTTGAAGATAAAGCTTCTGCTGCTGATTCTTCTCATAATCACAGGCAAGCCGAGAAGCGGCGCCGCGATCGGATTAACGGGCAGCTTGCTAGGCTTAGGAGGCTCATTCCCAAGTCAGAAAAGATGGACAAGGCAGCACTCCTAGAAAGAGTAGTTGAGCAAGTTAAGGATCTAAAGAGAAAAGCATCAGAAATCAGCAAAATCTTTACAATCCCATCAGAAATCGATGACATAACTATTGAATGTCATCGGAAAGAAAATCATCCCAACAACAACAACAACAACAACAACAACAACAACAACAGCAACAACAACAACAACAGCAACATAATGTTTATGAAGGCTACATTATGCTGCGAAGATCGGCCTGACTTAATTCCAGAGCTAATACGGGCACTCAAAGACCTTAACTTGACAGTAATTGGAGCTGATATTGGCTGTTTAGGAGGAAGGATGAAAAAAAATCATCCCAACAACAACAACAACAACAACAACAACAACAACAGCAACAGCAACATAATGTTTATGAAGGCTACATTATGCTGCGAAGATCGGCCTGACTTAATTCCAGAGCTAATACGGGAACTCAAAGACCTTAACTTGACAGTAATTGGAGCTGATATTGGCTGTTTAGGAGGAAGGATGAAAAGTATTCTATTACTTTACTACAAATTAGATAGTAATAATGATGGTGTTGTTTGTAATGTTAGTGCAATTAAGCAGTCTCTAATGGGTGTTTTAACTAGAATTATCTCATGGTCTAGTGCTAGTACTTCCAGTTTTCGTGTTACTAGTAAGAGGCAACGCTTCTTTTTCTCTTCTTAA

Coding sequence (CDS)

ATGGCCAAAAATAGCTTTCAGTATTCAAGTTTACCAGAAGAGGAAACCATGCCTCACCATTTTAATGCTACGAATACAACATCAAGTAGCATGCATTTGCAAGAATTGCCTGCAAATTGTTATGCCTTAGAATTTCAGGAACCTTTTGAAGGTTTTGCAGAATTTGAAGATAAAGCTTCTGCTGCTGATTCTTCTCATAATCACAGGCAAGCCGAGAAGCGGCGCCGCGATCGGATTAACGGGCAGCTTGCTAGGCTTAGGAGGCTCATTCCCAAGTCAGAAAAGATGGACAAGGCAGCACTCCTAGAAAGAGTAGTTGAGCAAGTTAAGGATCTAAAGAGAAAAGCATCAGAAATCAGCAAAATCTTTACAATCCCATCAGAAATCGATGACATAACTATTGAATGTCATCGGAAAGAAAATCATCCCAACAACAACAACAACAACAACAACAACAACAACAACAGCAACAACAACAACAACAGCAACATAATGTTTATGAAGGCTACATTATGCTGCGAAGATCGGCCTGACTTAATTCCAGAGCTAATACGGGCACTCAAAGACCTTAACTTGACAGTAATTGGAGCTGATATTGGCTGTTTAGGAGGAAGGATGAAAAAAAATCATCCCAACAACAACAACAACAACAACAACAACAACAACAGCAACAGCAACATAATGTTTATGAAGGCTACATTATGCTGCGAAGATCGGCCTGACTTAATTCCAGAGCTAATACGGGAACTCAAAGACCTTAACTTGACAGTAATTGGAGCTGATATTGGCTGTTTAGGAGGAAGGATGAAAAGTATTCTATTACTTTACTACAAATTAGATAGTAATAATGATGGTGTTGTTTGTAATGTTAGTGCAATTAAGCAGTCTCTAATGGGTGTTTTAACTAGAATTATCTCATGGTCTAGTGCTAGTACTTCCAGTTTTCGTGTTACTAGTAAGAGGCAACGCTTCTTTTTCTCTTCTTAA

Protein sequence

MAKNSFQYSSLPEEETMPHHFNATNTTSSSMHLQELPANCYALEFQEPFEGFAEFEDKASAADSSHNHRQAEKRRRDRINGQLARLRRLIPKSEKMDKAALLERVVEQVKDLKRKASEISKIFTIPSEIDDITIECHRKENHPNNNNNNNNNNNNSNNNNNSNIMFMKATLCCEDRPDLIPELIRALKDLNLTVIGADIGCLGGRMKKNHPNNNNNNNNNNNSNSNIMFMKATLCCEDRPDLIPELIRELKDLNLTVIGADIGCLGGRMKSILLLYYKLDSNNDGVVCNVSAIKQSLMGVLTRIISWSSASTSSFRVTSKRQRFFFSS
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo04201.1Spo04201.1mRNA


Homology
[Close]
BLAST of Spo04201.1 vs. NCBI nr
Match: gi|902234040|gb|KNA23304.1| (hypothetical protein SOVF_026020 isoform A [Spinacia oleracea])

HSP 1 Score: 335.9 bits (860), Expect = 8.000e-89
Identity = 189/218 (86.70%), Postives = 196/218 (89.91%), Query Frame = 1 

		  

Query: 17  MPHHFNATNTTSSSMHLQELPANCYALEFQEPFEGFAEFEDKASAADSSHNHRQAEKRRR 76
           MPHHFNATNTTSSSMHLQELPANCYALEFQEPFEGFAEFEDKASAADSSHNHRQAEKRRR
Sbjct: 1   MPHHFNATNTTSSSMHLQELPANCYALEFQEPFEGFAEFEDKASAADSSHNHRQAEKRRR 60

Query: 77  DRINGQLARLRRLIPKSEKMDKAALLERVVEQVKDLKRKASEISKIFTIPSEIDDITIEC 136
           DRINGQLARLRRLIPKSEKMDKAALLERVVEQVKDLKRKASEISKIFTIPSEIDDITIEC
Sbjct: 61  DRINGQLARLRRLIPKSEKMDKAALLERVVEQVKDLKRKASEISKIFTIPSEIDDITIEC 120

Query: 137 HRKENHPNNNNNNNNNNNNSNNNNNSNIMFMKATLCCEDRPDLIPELIRALKDLNLTVIG 196
           HRKENHPNNNNNNNN     NNN+NSNIMFMKATLCCEDRPDLIPELIR LKDLNLTVIG
Sbjct: 121 HRKENHPNNNNNNNN-----NNNSNSNIMFMKATLCCEDRPDLIPELIRELKDLNLTVIG 180

Query: 197 ADIGCLGGRMKKNHPNNNNNNNNNNNSNSNIMFMKATL 235
           ADIGCLGGRMK         ++NN+    N+  +K +L
Sbjct: 181 ADIGCLGGRMKSILLLYYKLDSNNDGVVCNVSAIKQSL 213
[Close]
BLAST of Spo04201.1 vs. NCBI nr
Match: gi|731314989|ref|XP_010689462.1| (PREDICTED: transcription factor bHLH51 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 331.3 bits (848), Expect = 2.000e-87
Identity = 205/332 (61.75%), Postives = 243/332 (73.19%), Query Frame = 1 

		  

Query: 1   MAKNSFQYSSLPEEETMPHHFNATNTTSSSMHLQELPANCYALEFQEPFEGFAEFEDKAS 60
           MAKNSF Y  LPEEET+ HHF+AT   +S M LQELP N YA ++QE F+G+AEFEDKA+
Sbjct: 1   MAKNSFCYPGLPEEETITHHFHAT---ASRMELQELPTNNYAFQYQEDFDGYAEFEDKAA 60

Query: 61  AADSSHNHRQAEKRRRDRINGQLARLRRLIPKSEKMDKAALLERVVEQVKDLKRKASEIS 120
           AA SSH+HRQAEKRRRDRINGQL RLRRLIPKS+KMDKAALLE+VVEQVKDLKRKASEI+
Sbjct: 61  AAASSHSHRQAEKRRRDRINGQLTRLRRLIPKSDKMDKAALLEKVVEQVKDLKRKASEIN 120

Query: 121 KIFTIPSEIDDITIECHRKENHPNNNNNNNNNNNNSNNNNNSNIMFMKATLCCEDRPDLI 180
           K FTIP+E DDITI+CH +     ++  +   +++   N+ S ++     +  +   D  
Sbjct: 121 KFFTIPTESDDITIDCHTETMQEKDSFPSTIIDHDHKENHPSRLVRTSLPVSGDPGVDSH 180

Query: 181 PELIRALKDLNLTVIGADIGCLGGRM-KKNHPNNNNNNNNNNNSNSNIMFMKATLCCEDR 240
           P                  G    +  K+NHPNNNNNNN        I+ +KAT CCEDR
Sbjct: 181 P---------------LPCGSFAPKENKENHPNNNNNNN--------IVLIKATFCCEDR 240

Query: 241 PDLIPELIRELKDLNLTVIGADIGCLGGRMKSILLLYYKLDSN---NDGVVCNVSAIKQS 300
            DLIPELIR LKDL LT+IGA+IGCLGGRMKSILLLYY+LD N   N G VC+VSAIKQS
Sbjct: 241 IDLIPELIRALKDLKLTIIGAEIGCLGGRMKSILLLYYRLDVNDVANHG-VCSVSAIKQS 300

Query: 301 LMGVLTRIISWSSASTSSFRVTSKRQRFFFSS 329
           +M VLTR++SWSSASTS+FRVTSKRQRFFFSS
Sbjct: 301 IMSVLTRVLSWSSASTSNFRVTSKRQRFFFSS 305
[Close]
BLAST of Spo04201.1 vs. NCBI nr
Match: gi|902234041|gb|KNA23305.1| (hypothetical protein SOVF_026020 isoform B [Spinacia oleracea])

HSP 1 Score: 331.3 bits (848), Expect = 2.000e-87
Identity = 189/219 (86.30%), Postives = 196/219 (89.50%), Query Frame = 1 

		  

Query: 17  MPHHFNATNTTSSSMHLQELPANCYALEFQEPFEGFAEFEDKASAADSSHNHRQAEKRRR 76
           MPHHFNATNTTSSSMHLQELPANCYALEFQEPFEGFAEFEDKASAADSSHNHRQAEKRRR
Sbjct: 1   MPHHFNATNTTSSSMHLQELPANCYALEFQEPFEGFAEFEDKASAADSSHNHRQAEKRRR 60

Query: 77  DRINGQLARLRRLIPKSEK-MDKAALLERVVEQVKDLKRKASEISKIFTIPSEIDDITIE 136
           DRINGQLARLRRLIPKSEK MDKAALLERVVEQVKDLKRKASEISKIFTIPSEIDDITIE
Sbjct: 61  DRINGQLARLRRLIPKSEKQMDKAALLERVVEQVKDLKRKASEISKIFTIPSEIDDITIE 120

Query: 137 CHRKENHPNNNNNNNNNNNNSNNNNNSNIMFMKATLCCEDRPDLIPELIRALKDLNLTVI 196
           CHRKENHPNNNNNNNN     NNN+NSNIMFMKATLCCEDRPDLIPELIR LKDLNLTVI
Sbjct: 121 CHRKENHPNNNNNNNN-----NNNSNSNIMFMKATLCCEDRPDLIPELIRELKDLNLTVI 180

Query: 197 GADIGCLGGRMKKNHPNNNNNNNNNNNSNSNIMFMKATL 235
           GADIGCLGGRMK         ++NN+    N+  +K +L
Sbjct: 181 GADIGCLGGRMKSILLLYYKLDSNNDGVVCNVSAIKQSL 214
[Close]
BLAST of Spo04201.1 vs. NCBI nr
Match: gi|734400216|gb|KHN31290.1| (Transcription factor bHLH51 [Glycine soja])

HSP 1 Score: 136.0 bits (341), Expect = 1.200e-28
Identity = 89/193 (46.11%), Postives = 125/193 (64.77%), Query Frame = 1 

		  

Query: 15  ETMPHHFNATNTTSSSMHLQELPANCYALEFQEPFEGFAEFEDKASAADSSHNHRQAEKR 74
           + +PHH     T S+S+   E  +      +  P EG AE  ++A +A  SH+  QAEKR
Sbjct: 52  QILPHHV----TDSASLQFGEFHS------WPLPIEGAAE--ERAISASKSHS--QAEKR 111

Query: 75  RRDRINGQLARLRRLIPKSEKMDKAALLERVVEQVKDLKRKASEISKIFTIPSEIDDITI 134
           RRDRIN QLA LR+LIPKS+KMDKAALL  V++QVKDLKRKA ++S+ FT+P+EID+++I
Sbjct: 112 RRDRINAQLATLRKLIPKSDKMDKAALLGSVIDQVKDLKRKAMDVSRAFTVPTEIDEVSI 171

Query: 135 ECHRKENHPNNNNNNNNNNNNSNNNNNSNIMFMKATLCCEDRPDLIPELIRALKDLNLTV 194
           +    ++      N   +N           + +KA++CC+DRP+L PELI+ LK L LT 
Sbjct: 172 DYDHVQDESCTKVNKQKDN-----------IVIKASVCCDDRPELFPELIQVLKGLRLTA 219

Query: 195 IGADIGCLGGRMK 208
           + ADI  +GGR+K
Sbjct: 232 VKADIASVGGRIK 219
[Close]
BLAST of Spo04201.1 vs. NCBI nr
Match: gi|593801048|ref|XP_007163561.1| (hypothetical protein PHAVU_001G244500g [Phaseolus vulgaris])

HSP 1 Score: 135.2 bits (339), Expect = 2.100e-28
Identity = 89/191 (46.60%), Postives = 126/191 (65.97%), Query Frame = 1 

		  

Query: 25  NTTSSSMHLQELP--ANCYALEFQE------PFEGFAEFEDKASAADSSHNHRQAEKRRR 84
           +++S ++  Q LP   +  +L+F E      P EG AE  ++A +A  SH+  QAEKRRR
Sbjct: 41  HSSSFAVPTQILPHVTDSASLQFGEFHSWPLPIEGAAE--ERAMSASKSHS--QAEKRRR 100

Query: 85  DRINGQLARLRRLIPKSEKMDKAALLERVVEQVKDLKRKASEISKIFTIPSEIDDITIEC 144
           DRIN QLA LR+LIPKS+KMDKAALL  V++ VKDLKRKA ++S+ FT+P+EID+++I+C
Sbjct: 101 DRINAQLATLRKLIPKSDKMDKAALLGSVIDHVKDLKRKAMDVSRAFTVPTEIDEVSIDC 160

Query: 145 HRKENHPNNNNNNNNNNNNSNNNNNSNIMFMKATLCCEDRPDLIPELIRALKDLNLTVIG 204
              ++      N    N           + +KA++CC+DRP+L PELI+ LK L LT + 
Sbjct: 161 DHVQDESCTKVNKLKEN-----------IVIKASVCCDDRPELFPELIQVLKGLRLTAVK 216

Query: 205 ADIGCLGGRMK 208
           ADI  +GGR+K
Sbjct: 221 ADIASVGGRIK 216
[Close]
BLAST of Spo04201.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RWK7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_026020 PE=4 SV=1)

HSP 1 Score: 335.9 bits (860), Expect = 5.600e-89
Identity = 189/218 (86.70%), Postives = 196/218 (89.91%), Query Frame = 1 

		  

Query: 17  MPHHFNATNTTSSSMHLQELPANCYALEFQEPFEGFAEFEDKASAADSSHNHRQAEKRRR 76
           MPHHFNATNTTSSSMHLQELPANCYALEFQEPFEGFAEFEDKASAADSSHNHRQAEKRRR
Sbjct: 1   MPHHFNATNTTSSSMHLQELPANCYALEFQEPFEGFAEFEDKASAADSSHNHRQAEKRRR 60

Query: 77  DRINGQLARLRRLIPKSEKMDKAALLERVVEQVKDLKRKASEISKIFTIPSEIDDITIEC 136
           DRINGQLARLRRLIPKSEKMDKAALLERVVEQVKDLKRKASEISKIFTIPSEIDDITIEC
Sbjct: 61  DRINGQLARLRRLIPKSEKMDKAALLERVVEQVKDLKRKASEISKIFTIPSEIDDITIEC 120

Query: 137 HRKENHPNNNNNNNNNNNNSNNNNNSNIMFMKATLCCEDRPDLIPELIRALKDLNLTVIG 196
           HRKENHPNNNNNNNN     NNN+NSNIMFMKATLCCEDRPDLIPELIR LKDLNLTVIG
Sbjct: 121 HRKENHPNNNNNNNN-----NNNSNSNIMFMKATLCCEDRPDLIPELIRELKDLNLTVIG 180

Query: 197 ADIGCLGGRMKKNHPNNNNNNNNNNNSNSNIMFMKATL 235
           ADIGCLGGRMK         ++NN+    N+  +K +L
Sbjct: 181 ADIGCLGGRMKSILLLYYKLDSNNDGVVCNVSAIKQSL 213
[Close]
BLAST of Spo04201.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RUU5_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_026020 PE=4 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 1.400e-87
Identity = 189/219 (86.30%), Postives = 196/219 (89.50%), Query Frame = 1 

		  

Query: 17  MPHHFNATNTTSSSMHLQELPANCYALEFQEPFEGFAEFEDKASAADSSHNHRQAEKRRR 76
           MPHHFNATNTTSSSMHLQELPANCYALEFQEPFEGFAEFEDKASAADSSHNHRQAEKRRR
Sbjct: 1   MPHHFNATNTTSSSMHLQELPANCYALEFQEPFEGFAEFEDKASAADSSHNHRQAEKRRR 60

Query: 77  DRINGQLARLRRLIPKSEK-MDKAALLERVVEQVKDLKRKASEISKIFTIPSEIDDITIE 136
           DRINGQLARLRRLIPKSEK MDKAALLERVVEQVKDLKRKASEISKIFTIPSEIDDITIE
Sbjct: 61  DRINGQLARLRRLIPKSEKQMDKAALLERVVEQVKDLKRKASEISKIFTIPSEIDDITIE 120

Query: 137 CHRKENHPNNNNNNNNNNNNSNNNNNSNIMFMKATLCCEDRPDLIPELIRALKDLNLTVI 196
           CHRKENHPNNNNNNNN     NNN+NSNIMFMKATLCCEDRPDLIPELIR LKDLNLTVI
Sbjct: 121 CHRKENHPNNNNNNNN-----NNNSNSNIMFMKATLCCEDRPDLIPELIRELKDLNLTVI 180

Query: 197 GADIGCLGGRMKKNHPNNNNNNNNNNNSNSNIMFMKATL 235
           GADIGCLGGRMK         ++NN+    N+  +K +L
Sbjct: 181 GADIGCLGGRMKSILLLYYKLDSNNDGVVCNVSAIKQSL 214
[Close]
BLAST of Spo04201.1 vs. UniProtKB/TrEMBL
Match: A0A0B2RD29_GLYSO (Transcription factor bHLH51 OS=Glycine soja GN=glysoja_022944 PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 8.500e-29
Identity = 89/193 (46.11%), Postives = 125/193 (64.77%), Query Frame = 1 

		  

Query: 15  ETMPHHFNATNTTSSSMHLQELPANCYALEFQEPFEGFAEFEDKASAADSSHNHRQAEKR 74
           + +PHH     T S+S+   E  +      +  P EG AE  ++A +A  SH+  QAEKR
Sbjct: 52  QILPHHV----TDSASLQFGEFHS------WPLPIEGAAE--ERAISASKSHS--QAEKR 111

Query: 75  RRDRINGQLARLRRLIPKSEKMDKAALLERVVEQVKDLKRKASEISKIFTIPSEIDDITI 134
           RRDRIN QLA LR+LIPKS+KMDKAALL  V++QVKDLKRKA ++S+ FT+P+EID+++I
Sbjct: 112 RRDRINAQLATLRKLIPKSDKMDKAALLGSVIDQVKDLKRKAMDVSRAFTVPTEIDEVSI 171

Query: 135 ECHRKENHPNNNNNNNNNNNNSNNNNNSNIMFMKATLCCEDRPDLIPELIRALKDLNLTV 194
           +    ++      N   +N           + +KA++CC+DRP+L PELI+ LK L LT 
Sbjct: 172 DYDHVQDESCTKVNKQKDN-----------IVIKASVCCDDRPELFPELIQVLKGLRLTA 219

Query: 195 IGADIGCLGGRMK 208
           + ADI  +GGR+K
Sbjct: 232 VKADIASVGGRIK 219
[Close]
BLAST of Spo04201.1 vs. UniProtKB/TrEMBL
Match: V7D1Z3_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_001G244500g PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 1.400e-28
Identity = 89/191 (46.60%), Postives = 126/191 (65.97%), Query Frame = 1 

		  

Query: 25  NTTSSSMHLQELP--ANCYALEFQE------PFEGFAEFEDKASAADSSHNHRQAEKRRR 84
           +++S ++  Q LP   +  +L+F E      P EG AE  ++A +A  SH+  QAEKRRR
Sbjct: 41  HSSSFAVPTQILPHVTDSASLQFGEFHSWPLPIEGAAE--ERAMSASKSHS--QAEKRRR 100

Query: 85  DRINGQLARLRRLIPKSEKMDKAALLERVVEQVKDLKRKASEISKIFTIPSEIDDITIEC 144
           DRIN QLA LR+LIPKS+KMDKAALL  V++ VKDLKRKA ++S+ FT+P+EID+++I+C
Sbjct: 101 DRINAQLATLRKLIPKSDKMDKAALLGSVIDHVKDLKRKAMDVSRAFTVPTEIDEVSIDC 160

Query: 145 HRKENHPNNNNNNNNNNNNSNNNNNSNIMFMKATLCCEDRPDLIPELIRALKDLNLTVIG 204
              ++      N    N           + +KA++CC+DRP+L PELI+ LK L LT + 
Sbjct: 161 DHVQDESCTKVNKLKEN-----------IVIKASVCCDDRPELFPELIQVLKGLRLTAVK 216

Query: 205 ADIGCLGGRMK 208
           ADI  +GGR+K
Sbjct: 221 ADIASVGGRIK 216
[Close]
BLAST of Spo04201.1 vs. UniProtKB/TrEMBL
Match: I1MZ11_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_18G025800 PE=4 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 1.900e-28
Identity = 89/193 (46.11%), Postives = 125/193 (64.77%), Query Frame = 1 

		  

Query: 15  ETMPHHFNATNTTSSSMHLQELPANCYALEFQEPFEGFAEFEDKASAADSSHNHRQAEKR 74
           + +PHH     T S+S+   E  +      +  P EG AE  ++A +A  SH+  QAEKR
Sbjct: 52  QILPHHV----TDSASLQFGEFHS------WPLPIEGAAE--ERAISASKSHS--QAEKR 111

Query: 75  RRDRINGQLARLRRLIPKSEKMDKAALLERVVEQVKDLKRKASEISKIFTIPSEIDDITI 134
           RRDRIN QLA LR+LIPKS+KMDKAALL  V++QVKDLKRKA ++S+ FT+P+EID+++I
Sbjct: 112 RRDRINAQLATLRKLIPKSDKMDKAALLGSVIDQVKDLKRKAMDVSRAFTVPTEIDEVSI 171

Query: 135 ECHRKENHPNNNNNNNNNNNNSNNNNNSNIMFMKATLCCEDRPDLIPELIRALKDLNLTV 194
           +    ++      N   +N           + +KA++CC+DRP+L PELI+ LK L LT 
Sbjct: 172 DYDHVQDESCTKVNKLKDN-----------IVIKASVCCDDRPELFPELIQVLKGLRLTA 219

Query: 195 IGADIGCLGGRMK 208
           + ADI  +GGR+K
Sbjct: 232 VKADIASVGGRIK 219
[Close]
BLAST of Spo04201.1 vs. ExPASy Swiss-Prot
Match: BH051_ARATH (Transcription factor bHLH51 OS=Arabidopsis thaliana GN=BHLH51 PE=2 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 2.500e-21
Identity = 72/175 (41.14%), Postives = 104/175 (59.43%), Query Frame = 1 

		  

Query: 61  AADSSHNHRQAEKRRRDRINGQLARLRRLIPKSEKMDKAALLERVVEQVKDLKRKASEIS 120
           A   S +HR AEKRRRDRIN  L  LR+L+P S+K+DKAALL  V+EQVK+LK+KA+E  
Sbjct: 60  AESLSRSHRLAEKRRRDRINSHLTALRKLVPNSDKLDKAALLATVIEQVKELKQKAAESP 119

Query: 121 KIFTIPSEIDDITIECHRKENHPNNNNNNNNNNNNSNNNNNSNIMFMKATLCCEDRPDLI 180
               +P+E D++T++                    S+  +N+N +  KA+ CCED+P+ I
Sbjct: 120 IFQDLPTEADEVTVQ----------------PETISDFESNTNTIIFKASFCCEDQPEAI 179

Query: 181 PELIRALKDLNLTVIGADIGCLGGRMKKNHPNNNNNNNNNNNSNSNIMFMKATLC 236
            E+IR L  L L  I A+I  +GGRM+ N    ++N N   N  ++   +K +LC
Sbjct: 180 SEIIRVLTKLQLETIQAEIISVGGRMRINFILKDSNCNETTNIAASAKALKQSLC 218
[Close]
BLAST of Spo04201.1 vs. ExPASy Swiss-Prot
Match: BH030_ARATH (Transcription factor bHLH30 OS=Arabidopsis thaliana GN=BHLH30 PE=1 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 2.100e-20
Identity = 58/149 (38.93%), Postives = 90/149 (60.40%), Query Frame = 1 

		  

Query: 59  ASAADSSHNHRQAEKRRRDRINGQLARLRRLIPKSEKMDKAALLERVVEQVKDLKRKASE 118
           A A  +S +H +AE+RRR+RIN  LA+LR ++P + K DKA+LL  V++ VK+LKR+ S 
Sbjct: 169 AKALAASKSHSEAERRRRERINNHLAKLRSILPNTTKTDKASLLAEVIQHVKELKRETSV 228

Query: 119 ISKIFTIPSEIDDITIECHRKENHPNNNNNNNNNNNNSNNNNNSNIMFMKATLCCEDRPD 178
           IS+   +P+E D++T+    +E                          +KA+LCCEDR D
Sbjct: 229 ISETNLVPTESDELTVAFTEEE------------------ETGDGRFVIKASLCCEDRSD 288

Query: 179 LIPELIRALKDLNLTVIGADIGCLGGRMK 208
           L+P++I+ LK + L  + A+I  +GGR+K
Sbjct: 289 LLPDMIKTLKAMRLKTLKAEITTVGGRVK 299
[Close]
BLAST of Spo04201.1 vs. ExPASy Swiss-Prot
Match: BH032_ARATH (Transcription factor AIG1 OS=Arabidopsis thaliana GN=BHLH32 PE=1 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 4.600e-20
Identity = 56/149 (37.58%), Postives = 93/149 (62.42%), Query Frame = 1 

		  

Query: 59  ASAADSSHNHRQAEKRRRDRINGQLARLRRLIPKSEKMDKAALLERVVEQVKDLKRKASE 118
           A A  +S +H +AE+RRR+RIN  LA+LR ++P + K DKA+LL  V++ +K+LKR+ S+
Sbjct: 127 AKALAASKSHSEAERRRRERINTHLAKLRSILPNTTKTDKASLLAEVIQHMKELKRQTSQ 186

Query: 119 ISKIFTIPSEIDDITIECHRKENHPNNNNNNNNNNNNSNNNNNSNIMFMKATLCCEDRPD 178
           I+  + +P+E DD+T++                    S+ N+    + ++A+ CC+DR D
Sbjct: 187 ITDTYQVPTECDDLTVD--------------------SSYNDEEGNLVIRASFCCQDRTD 246

Query: 179 LIPELIRALKDLNLTVIGADIGCLGGRMK 208
           L+ ++I ALK L L  + A+I  +GGR+K
Sbjct: 247 LMHDVINALKSLRLRTLKAEIATVGGRVK 255
[Close]
BLAST of Spo04201.1 vs. ExPASy Swiss-Prot
Match: BH106_ARATH (Transcription factor bHLH106 OS=Arabidopsis thaliana GN=BHLH106 PE=2 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 5.900e-15
Identity = 58/154 (37.66%), Postives = 95/154 (61.69%), Query Frame = 1 

		  

Query: 56  EDKASAADSSHNHRQAEKRRRDRINGQLARLRRLIPKSEKMDKAALLERVVEQVKDLKRK 115
           +D+A AA    NH++AE+RRR+RIN  L +LR ++  + K DKA LL +VV++V++LK++
Sbjct: 61  QDRALAA--LRNHKEAERRRRERINSHLNKLRNVLSCNSKTDKATLLAKVVQRVRELKQQ 120

Query: 116 ASEISKI--FTIPSEIDDITIECHRKENHPNNNNNNNNNNNNSNNNNNSNIMFMKATLCC 175
             E S      +PSE D+I++                   +  + +N+ +I+F KA+LCC
Sbjct: 121 TLETSDSDQTLLPSETDEISVL------------------HFGDYSNDGHIIF-KASLCC 180

Query: 176 EDRPDLIPELIRALKDLNLTVIGADIGCLGGRMK 208
           EDR DL+P+L+  LK LN+  + A++  +GGR +
Sbjct: 181 EDRSDLLPDLMEILKSLNMKTLRAEMVTIGGRTR 193
[Close]
BLAST of Spo04201.1 vs. ExPASy Swiss-Prot
Match: BH107_ARATH (Putative transcription factor bHLH107 OS=Arabidopsis thaliana GN=BHLH107 PE=2 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 5.900e-15
Identity = 59/153 (38.56%), Postives = 94/153 (61.44%), Query Frame = 1 

		  

Query: 55  FEDKASAADSSHNHRQAEKRRRDRINGQLARLRRLIPKSEKMDKAALLERVVEQVKDLKR 114
           +EDKA A  S  NH++AE++RR RIN  L +LR+L+  + K DK+ LL +VV++VK+LK+
Sbjct: 38  YEDKALA--SLRNHKEAERKRRARINSHLNKLRKLLSCNSKTDKSTLLAKVVQRVKELKQ 97

Query: 115 KASEISKIFTIPSEIDDITIECHRKENHPNNNNNNNNNNNNSNNNNNSNIMFMKATLCCE 174
           +  EI+   TIPSE D+I++                 N  + +  ++  I+F K + CCE
Sbjct: 98  QTLEITDE-TIPSETDEISVL----------------NIEDCSRGDDRRIIF-KVSFCCE 157

Query: 175 DRPDLIPELIRALKDLNLTVIGADIGCLGGRMK 208
           DRP+L+ +L+  LK L +  + AD+  +GGR +
Sbjct: 158 DRPELLKDLMETLKSLQMETLFADMTTVGGRTR 170
[Close]
BLAST of Spo04201.1 vs. TAIR (Arabidopsis)
Match: AT2G40200.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 104.4 bits (259), Expect = 1.400e-22
Identity = 72/175 (41.14%), Postives = 104/175 (59.43%), Query Frame = 1 

		  

Query: 61  AADSSHNHRQAEKRRRDRINGQLARLRRLIPKSEKMDKAALLERVVEQVKDLKRKASEIS 120
           A   S +HR AEKRRRDRIN  L  LR+L+P S+K+DKAALL  V+EQVK+LK+KA+E  
Sbjct: 60  AESLSRSHRLAEKRRRDRINSHLTALRKLVPNSDKLDKAALLATVIEQVKELKQKAAESP 119

Query: 121 KIFTIPSEIDDITIECHRKENHPNNNNNNNNNNNNSNNNNNSNIMFMKATLCCEDRPDLI 180
               +P+E D++T++                    S+  +N+N +  KA+ CCED+P+ I
Sbjct: 120 IFQDLPTEADEVTVQ----------------PETISDFESNTNTIIFKASFCCEDQPEAI 179

Query: 181 PELIRALKDLNLTVIGADIGCLGGRMKKNHPNNNNNNNNNNNSNSNIMFMKATLC 236
            E+IR L  L L  I A+I  +GGRM+ N    ++N N   N  ++   +K +LC
Sbjct: 180 SEIIRVLTKLQLETIQAEIISVGGRMRINFILKDSNCNETTNIAASAKALKQSLC 218
[Close]
BLAST of Spo04201.1 vs. TAIR (Arabidopsis)
Match: AT1G68810.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 101.3 bits (251), Expect = 1.200e-21
Identity = 58/149 (38.93%), Postives = 90/149 (60.40%), Query Frame = 1 

		  

Query: 59  ASAADSSHNHRQAEKRRRDRINGQLARLRRLIPKSEKMDKAALLERVVEQVKDLKRKASE 118
           A A  +S +H +AE+RRR+RIN  LA+LR ++P + K DKA+LL  V++ VK+LKR+ S 
Sbjct: 169 AKALAASKSHSEAERRRRERINNHLAKLRSILPNTTKTDKASLLAEVIQHVKELKRETSV 228

Query: 119 ISKIFTIPSEIDDITIECHRKENHPNNNNNNNNNNNNSNNNNNSNIMFMKATLCCEDRPD 178
           IS+   +P+E D++T+    +E                          +KA+LCCEDR D
Sbjct: 229 ISETNLVPTESDELTVAFTEEE------------------ETGDGRFVIKASLCCEDRSD 288

Query: 179 LIPELIRALKDLNLTVIGADIGCLGGRMK 208
           L+P++I+ LK + L  + A+I  +GGR+K
Sbjct: 289 LLPDMIKTLKAMRLKTLKAEITTVGGRVK 299
[Close]
BLAST of Spo04201.1 vs. TAIR (Arabidopsis)
Match: AT3G25710.1 (basic helix-loop-helix 32)

HSP 1 Score: 100.1 bits (248), Expect = 2.600e-21
Identity = 56/149 (37.58%), Postives = 93/149 (62.42%), Query Frame = 1 

		  

Query: 59  ASAADSSHNHRQAEKRRRDRINGQLARLRRLIPKSEKMDKAALLERVVEQVKDLKRKASE 118
           A A  +S +H +AE+RRR+RIN  LA+LR ++P + K DKA+LL  V++ +K+LKR+ S+
Sbjct: 127 AKALAASKSHSEAERRRRERINTHLAKLRSILPNTTKTDKASLLAEVIQHMKELKRQTSQ 186

Query: 119 ISKIFTIPSEIDDITIECHRKENHPNNNNNNNNNNNNSNNNNNSNIMFMKATLCCEDRPD 178
           I+  + +P+E DD+T++                    S+ N+    + ++A+ CC+DR D
Sbjct: 187 ITDTYQVPTECDDLTVD--------------------SSYNDEEGNLVIRASFCCQDRTD 246

Query: 179 LIPELIRALKDLNLTVIGADIGCLGGRMK 208
           L+ ++I ALK L L  + A+I  +GGR+K
Sbjct: 247 LMHDVINALKSLRLRTLKAEIATVGGRVK 255
[Close]
BLAST of Spo04201.1 vs. TAIR (Arabidopsis)
Match: AT2G41130.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 83.2 bits (204), Expect = 3.300e-16
Identity = 58/154 (37.66%), Postives = 95/154 (61.69%), Query Frame = 1 

		  

Query: 56  EDKASAADSSHNHRQAEKRRRDRINGQLARLRRLIPKSEKMDKAALLERVVEQVKDLKRK 115
           +D+A AA    NH++AE+RRR+RIN  L +LR ++  + K DKA LL +VV++V++LK++
Sbjct: 61  QDRALAA--LRNHKEAERRRRERINSHLNKLRNVLSCNSKTDKATLLAKVVQRVRELKQQ 120

Query: 116 ASEISKI--FTIPSEIDDITIECHRKENHPNNNNNNNNNNNNSNNNNNSNIMFMKATLCC 175
             E S      +PSE D+I++                   +  + +N+ +I+F KA+LCC
Sbjct: 121 TLETSDSDQTLLPSETDEISVL------------------HFGDYSNDGHIIF-KASLCC 180

Query: 176 EDRPDLIPELIRALKDLNLTVIGADIGCLGGRMK 208
           EDR DL+P+L+  LK LN+  + A++  +GGR +
Sbjct: 181 EDRSDLLPDLMEILKSLNMKTLRAEMVTIGGRTR 193
[Close]
BLAST of Spo04201.1 vs. TAIR (Arabidopsis)
Match: AT3G56770.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 83.2 bits (204), Expect = 3.300e-16
Identity = 59/153 (38.56%), Postives = 94/153 (61.44%), Query Frame = 1 

		  

Query: 55  FEDKASAADSSHNHRQAEKRRRDRINGQLARLRRLIPKSEKMDKAALLERVVEQVKDLKR 114
           +EDKA A  S  NH++AE++RR RIN  L +LR+L+  + K DK+ LL +VV++VK+LK+
Sbjct: 38  YEDKALA--SLRNHKEAERKRRARINSHLNKLRKLLSCNSKTDKSTLLAKVVQRVKELKQ 97

Query: 115 KASEISKIFTIPSEIDDITIECHRKENHPNNNNNNNNNNNNSNNNNNSNIMFMKATLCCE 174
           +  EI+   TIPSE D+I++                 N  + +  ++  I+F K + CCE
Sbjct: 98  QTLEITDE-TIPSETDEISVL----------------NIEDCSRGDDRRIIF-KVSFCCE 157

Query: 175 DRPDLIPELIRALKDLNLTVIGADIGCLGGRMK 208
           DRP+L+ +L+  LK L +  + AD+  +GGR +
Sbjct: 158 DRPELLKDLMETLKSLQMETLFADMTTVGGRTR 170
The following BLAST results are available for this feature:
BLAST of Spo04201.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902234040|gb|KNA23304.1|8.0e-8986.7hypothetical protein SOVF_0260... [more]
gi|731314989|ref|XP_010689462.1|2.0e-8761.7PREDICTED: transcription facto... [more]
gi|902234041|gb|KNA23305.1|2.0e-8786.3hypothetical protein SOVF_0260... [more]
gi|734400216|gb|KHN31290.1|1.2e-2846.1Transcription factor bHLH51 [G... [more]
gi|593801048|ref|XP_007163561.1|2.1e-2846.6hypothetical protein PHAVU_001... [more]
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BLAST of Spo04201.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RWK7_SPIOL5.6e-8986.7Uncharacterized protein OS=Spi... [more]
A0A0K9RUU5_SPIOL1.4e-8786.3Uncharacterized protein OS=Spi... [more]
A0A0B2RD29_GLYSO8.5e-2946.1Transcription factor bHLH51 OS... [more]
V7D1Z3_PHAVU1.4e-2846.6Uncharacterized protein OS=Pha... [more]
I1MZ11_SOYBN1.9e-2846.1Uncharacterized protein OS=Gly... [more]
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BLAST of Spo04201.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
BH051_ARATH2.5e-2141.1Transcription factor bHLH51 OS... [more]
BH030_ARATH2.1e-2038.9Transcription factor bHLH30 OS... [more]
BH032_ARATH4.6e-2037.5Transcription factor AIG1 OS=A... [more]
BH106_ARATH5.9e-1537.6Transcription factor bHLH106 O... [more]
BH107_ARATH5.9e-1538.5Putative transcription factor ... [more]
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BLAST of Spo04201.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT2G40200.11.4e-2241.1basic helix-loop-helix (bHLH) ... [more]
AT1G68810.11.2e-2138.9basic helix-loop-helix (bHLH) ... [more]
AT3G25710.12.6e-2137.5basic helix-loop-helix 32[more]
AT2G41130.13.3e-1637.6basic helix-loop-helix (bHLH) ... [more]
AT3G56770.13.3e-1638.5basic helix-loop-helix (bHLH) ... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainGENE3D4.10.280.10coord: 66..115
score: 7.4
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPFAMPF00010HLHcoord: 67..112
score: 1.3
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainSMARTSM00353finuluscoord: 69..118
score: 3.2
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPROFILEPS50888BHLHcoord: 63..112
score: 15
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainunknownSSF47459HLH, helix-loop-helix DNA-binding domaincoord: 66..120
score: 1.96
NoneNo IPR availableunknownCoilCoilcoord: 102..122
score: -coord: 69..89
scor
NoneNo IPR availablePANTHERPTHR12565STEROL REGULATORY ELEMENT-BINDING PROTEINcoord: 164..197
score: 3.5E-60coord: 56..144
score: 3.5E-60coord: 261..328
score: 3.5
NoneNo IPR availablePANTHERPTHR12565:SF181SUBFAMILY NOT NAMEDcoord: 56..144
score: 3.5E-60coord: 261..328
score: 3.5E-60coord: 164..197
score: 3.5

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009651 response to salt stress
biological_process GO:0008152 metabolic process
biological_process GO:2000030 regulation of response to red or far red light
biological_process GO:0010046 response to mycotoxin
biological_process GO:0010224 response to UV-B
biological_process GO:0007030 Golgi organization
biological_process GO:0006816 calcium ion transport
biological_process GO:0006468 protein phosphorylation
biological_process GO:0006886 intracellular protein transport
biological_process GO:0006913 nucleocytoplasmic transport
biological_process GO:0007264 small GTPase mediated signal transduction
biological_process GO:0009864 induced systemic resistance, jasmonic acid mediated signaling pathway
cellular_component GO:0005794 Golgi apparatus
cellular_component GO:0016020 membrane
cellular_component GO:0005634 nucleus
cellular_component GO:0009504 cell plate
cellular_component GO:0005737 cytoplasm
cellular_component GO:0010008 endosome membrane
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding
molecular_function GO:0005515 protein binding
molecular_function GO:0005524 ATP binding
molecular_function GO:0030247 polysaccharide binding
molecular_function GO:0004672 protein kinase activity
molecular_function GO:0016874 ligase activity
molecular_function GO:0019899 enzyme binding
molecular_function GO:0046983 protein dimerization activity
RNA-Seq Expression