Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTGCAGCTAAGAGATGCTACGATTTTTTAATTGGCTGGTAAGCTCGAGATTAAATGGTTAAAATTTTACAATTTACGGAGTACTTCTTTTACTTGCAATAATTCAACCGGTATACTTTTTAATGTATTATTTGACCCTTAATTATCTCTAATTTTATATTGTAAAATTTTTAAAAAGTTGGAATTATGAAAATATGTAATACGACTAATCCAATAACGTTTTGCATAATAATATTTGACTTTTATATATGTAGTATTGGTTAAAAATTCAAGTTAGAACTAATTAATTAATGTAAAAGAACGTTGATATTTACAAATTCAGCATGTAAATTTTCGTGTAGGCAACTCAGCTCAAAATCAAAATCAAAATTAAAATTAAACCCTAGATCTAATAGTGCTAAAGTCAAAATGATACAAATATAAAAATAAAAAAAAAACACAAAGAGAGTACGTGTGTTTTTTTTATATAGAGAATGTCGTTCTATAATACAAACGTACGAAGCAAACCAACATAAGTTGGAGGAGTTGGTGGGGAACTCACCTTGTGACTTTGAGGTCACAAGGTCGAGCCCCATCAGATCCAAAATGCTTGGGAGTGACTCAAGCGAAGACCTGCGTAGCAGAGCTGGTTAACCTGTGCTAGGTGCTGATTCAGTAGGGTCATTTCTTCTTACCTATTATAAAAAAATAAAAAATTAAATTAAATTTACATACGAAGTACTCTGTATATTTTTAACTAGAAGACGAGTTTTTTGTGCTAATTAGCTTTTACCGTACTTTGTTGGGTATATTAGGTTTATGCATCCATTGACATATGGTGATTACCCTGAAATAATGAAGAAAAATGGTGGCTCAAAAATTCCGGTTTTCACAAAAAACGAGTCAGAATTAGTAAAGGGTTCCTTCGATTTTATTGGAATCAACTACTATTACATAATGGGGGTCAGAGACAACTCTATGAGTCTCACCACAGTGCAAAGAGATTTGTATGCCGACATGGCAGCACAGTGGATAGGTATGATTTACATGCCAAATTGCCAACAGTCTTTTATATCATGCGTTGTACTCCTAATATATTTCAGTTGTTGAAAAAACAAGCATACTTACAGGAACTTGAAAGTTTATTTTTTTAGTTGTTCATTACTTAATTGTACATTTGTACTACATAATAATTGAGTGATTTTTATGTTACAGATTTAGACACGGTTGCACCACCAGAAGAGGTAAGGTCTAAGTAAGATTATGTCATAGTTTTTTTTTTGATAATTTGGTGCTATTTTATTGATGTTCAAGGCAATACTAGTATGCTACTTTGGCTGCCTGACTTGAATCAGAGGCATCAACAATTACATTGTTTTAATAGATGAAGCCCATTAGAGCCATGCGATGAACTCATCCCTTCTAGTGAGGCCTTGTTTCGCCATTGTGTCTGCCACCACGTTTGTTTCACGGCCTTTGTACACTATTTCGATCCCCTTTCTTTGTGTCATTGCATTTCGGATGAAGTTGATGATAAACATGAGATTCCATGGACCATCATTTTCACCGTTGCACCATTTTACTGCGTTTGCCGAATCTGATTCCACTATGAGGTGACTATGAGCGCACCAGTCAAGGGATATATAAACTAGGAGATTATAAGATTATGTCATAGTTATTTGGTTATAAGTTATAACTATTTTGTTGTGGATTATATCGTATGTAGAAATGAAGTAAATTTTATTTGTAATCTCCTAGTTTATATATCCTATTGAACCATGGGGTTTAGAGCGAGTACTGGAGCATTACAAAGAGGTTTATCAAAATCCTCCTATCTTTATTCATGAAAATGGTTATTCCTCTTCCTTCCTTTTCTTTATTCTTGTAATTCTTTTGGATTATATATTTTAAGTAGATATTAACTACCGTTAAAATAATCCATTCAGGTCAAGTGGCAAGTTATACTACATCCATAAATGATCCATTCAGGGTTGAATATTTGCATGACTATATTGGGATTTTGCTCAATGCTGTGAGGTAAGGCTACTAGATCCGCCTTGTGGTCATGTTCGATTCATCTTATTTCCACTTAATTCCAGAAAAAACGATTTCATCAAAAAATAAAGGCTACTCGAGCACAACTAATAACTAAAATAAGTCCAGATACATGAACATCATGTGAAGAAATCACTAATTAAGTATGACTAAATGCTATTACTTTTGCTTGTTATATTGCAGAAATGGATCCAATACAAAAGGGTACTTTGTATGGTCACTATTGGACGTATATGAACTATTGTTCGACTTTGATTATACCTTCGGACTATATTATGTTGATTACAATGATCCAAATTTGACAAGACGTCCTAAGTTATCTCAAAAATGGTACTCTCAATTTTTGAAGGGCAAAAACACTAACCACGGTTACAAAAATGAATCAAGTGGAGATGCAACGACTCTCGATGACCTCCGATACAGGGCTTCATAA ATGGCTGCAGCTAAGAGATGCTACGATTTTTTAATTGGCTGGTTTATGCATCCATTGACATATGGTGATTACCCTGAAATAATGAAGAAAAATGGTGGCTCAAAAATTCCGGTTTTCACAAAAAACGAGTCAGAATTAGTAAAGGGTTCCTTCGATTTTATTGGAATCAACTACTATTACATAATGGGGGTCAGAGACAACTCTATGAGTCTCACCACAGTGCAAAGAGATTTGTATGCCGACATGGCAGCACAGTGGATAGATTTAGACACGGTTGCACCACCAGAAGAGGGCAAAAACACTAACCACGGTTACAAAAATGAATCAAGTGGAGATGCAACGACTCTCGATGACCTCCGATACAGGGCTTCATAA ATGGCTGCAGCTAAGAGATGCTACGATTTTTTAATTGGCTGGTTTATGCATCCATTGACATATGGTGATTACCCTGAAATAATGAAGAAAAATGGTGGCTCAAAAATTCCGGTTTTCACAAAAAACGAGTCAGAATTAGTAAAGGGTTCCTTCGATTTTATTGGAATCAACTACTATTACATAATGGGGGTCAGAGACAACTCTATGAGTCTCACCACAGTGCAAAGAGATTTGTATGCCGACATGGCAGCACAGTGGATAGATTTAGACACGGTTGCACCACCAGAAGAGGGCAAAAACACTAACCACGGTTACAAAAATGAATCAAGTGGAGATGCAACGACTCTCGATGACCTCCGATACAGGGCTTCATAA MAAAKRCYDFLIGWFMHPLTYGDYPEIMKKNGGSKIPVFTKNESELVKGSFDFIGINYYYIMGVRDNSMSLTTVQRDLYADMAAQWIDLDTVAPPEEGKNTNHGYKNESSGDATTLDDLRYRAS Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo04194.1 vs. NCBI nr
Match: gi|902233841|gb|KNA23218.1| (hypothetical protein SOVF_026760 [Spinacia oleracea]) HSP 1 Score: 174.1 bits (440), Expect = 1.500e-40 Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 1
BLAST of Spo04194.1 vs. NCBI nr
Match: gi|902203901|gb|KNA14727.1| (hypothetical protein SOVF_104960 isoform A [Spinacia oleracea]) HSP 1 Score: 145.6 bits (366), Expect = 5.800e-32 Identity = 66/96 (68.75%), Postives = 81/96 (84.38%), Query Frame = 1
BLAST of Spo04194.1 vs. NCBI nr
Match: gi|902203902|gb|KNA14728.1| (hypothetical protein SOVF_104960 isoform B [Spinacia oleracea]) HSP 1 Score: 145.6 bits (366), Expect = 5.800e-32 Identity = 66/96 (68.75%), Postives = 81/96 (84.38%), Query Frame = 1
BLAST of Spo04194.1 vs. NCBI nr
Match: gi|731346327|ref|XP_010684396.1| (PREDICTED: beta-glucosidase 11-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 143.7 bits (361), Expect = 2.200e-31 Identity = 64/95 (67.37%), Postives = 74/95 (77.89%), Query Frame = 1
BLAST of Spo04194.1 vs. NCBI nr
Match: gi|870854275|gb|KMT06072.1| (hypothetical protein BVRB_7g163940 isoform B [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 141.0 bits (354), Expect = 1.400e-30 Identity = 63/95 (66.32%), Postives = 75/95 (78.95%), Query Frame = 1
BLAST of Spo04194.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RUS7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_026760 PE=3 SV=1) HSP 1 Score: 174.1 bits (440), Expect = 1.100e-40 Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 1
BLAST of Spo04194.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R7J1_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_104960 PE=4 SV=1) HSP 1 Score: 145.6 bits (366), Expect = 4.000e-32 Identity = 66/96 (68.75%), Postives = 81/96 (84.38%), Query Frame = 1
BLAST of Spo04194.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R5E4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_104960 PE=4 SV=1) HSP 1 Score: 145.6 bits (366), Expect = 4.000e-32 Identity = 66/96 (68.75%), Postives = 81/96 (84.38%), Query Frame = 1
BLAST of Spo04194.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BXZ6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g163940 PE=3 SV=1) HSP 1 Score: 141.0 bits (354), Expect = 1.000e-30 Identity = 63/95 (66.32%), Postives = 75/95 (78.95%), Query Frame = 1
BLAST of Spo04194.1 vs. UniProtKB/TrEMBL
Match: A0A0J8ESF0_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g163940 PE=3 SV=1) HSP 1 Score: 141.0 bits (354), Expect = 1.000e-30 Identity = 63/95 (66.32%), Postives = 75/95 (78.95%), Query Frame = 1
BLAST of Spo04194.1 vs. ExPASy Swiss-Prot
Match: BGL22_ORYSJ (Beta-glucosidase 22 OS=Oryza sativa subsp. japonica GN=BGLU22 PE=2 SV=1) HSP 1 Score: 102.8 bits (255), Expect = 2.700e-21 Identity = 47/84 (55.95%), Postives = 60/84 (71.43%), Query Frame = 1
BLAST of Spo04194.1 vs. ExPASy Swiss-Prot
Match: BGL23_ORYSJ (Putative beta-glucosidase 23 OS=Oryza sativa subsp. japonica GN=BGLU23 PE=5 SV=2) HSP 1 Score: 100.1 bits (248), Expect = 1.800e-20 Identity = 48/84 (57.14%), Postives = 57/84 (67.86%), Query Frame = 1
BLAST of Spo04194.1 vs. ExPASy Swiss-Prot
Match: HIUH_SOYBN (Hydroxyisourate hydrolase OS=Glycine max GN=HIUH PE=1 SV=1) HSP 1 Score: 98.6 bits (244), Expect = 5.100e-20 Identity = 46/82 (56.10%), Postives = 56/82 (68.29%), Query Frame = 1
BLAST of Spo04194.1 vs. ExPASy Swiss-Prot
Match: AA5GT_DIACA (Cyanidin 3-O-glucoside 5-O-glucosyltransferase (acyl-glucose) OS=Dianthus caryophyllus GN=AA5GT PE=1 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 6.700e-20 Identity = 43/79 (54.43%), Postives = 56/79 (70.89%), Query Frame = 1
BLAST of Spo04194.1 vs. ExPASy Swiss-Prot
Match: BGL11_ARATH (Beta-glucosidase 11 OS=Arabidopsis thaliana GN=BGLU11 PE=2 SV=2) HSP 1 Score: 97.4 bits (241), Expect = 1.100e-19 Identity = 46/99 (46.46%), Postives = 61/99 (61.62%), Query Frame = 1
BLAST of Spo04194.1 vs. TAIR (Arabidopsis)
Match: AT1G02850.4 (beta glucosidase 11) HSP 1 Score: 97.4 bits (241), Expect = 6.400e-21 Identity = 46/99 (46.46%), Postives = 61/99 (61.62%), Query Frame = 1
BLAST of Spo04194.1 vs. TAIR (Arabidopsis)
Match: AT1G26560.1 (beta glucosidase 40) HSP 1 Score: 86.3 bits (212), Expect = 1.500e-17 Identity = 44/100 (44.00%), Postives = 62/100 (62.00%), Query Frame = 1
BLAST of Spo04194.1 vs. TAIR (Arabidopsis)
Match: AT2G44480.1 (beta glucosidase 17) HSP 1 Score: 85.5 bits (210), Expect = 2.500e-17 Identity = 38/80 (47.50%), Postives = 54/80 (67.50%), Query Frame = 1
BLAST of Spo04194.1 vs. TAIR (Arabidopsis)
Match: AT1G51470.1 (beta glucosidase 35) HSP 1 Score: 85.1 bits (209), Expect = 3.300e-17 Identity = 35/58 (60.34%), Postives = 44/58 (75.86%), Query Frame = 1
BLAST of Spo04194.1 vs. TAIR (Arabidopsis)
Match: AT1G47600.1 (beta glucosidase 34) HSP 1 Score: 84.0 bits (206), Expect = 7.300e-17 Identity = 34/58 (58.62%), Postives = 44/58 (75.86%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo04194.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo04194.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo04194.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo04194.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
|