Homology
BLAST of Spo04141.1 vs. NCBI nr
Match:
gi|902213558|gb|KNA17291.1| (hypothetical protein SOVF_081360 [Spinacia oleracea])
HSP 1 Score: 2255.3 bits (5843), Expect = 0.000e+0
Identity = 1116/1116 (100.00%), Postives = 1116/1116 (100.00%), Query Frame = 1
Query: 1 MAIDRPTVERSTVRVSNIPTTATAQDIFDFLESKIGKGTIFAIEIFTEKKNWKSKGHGRV 60
MAIDRPTVERSTVRVSNIPTTATAQDIFDFLESKIGKGTIFAIEIFTEKKNWKSKGHGRV
Sbjct: 1 MAIDRPTVERSTVRVSNIPTTATAQDIFDFLESKIGKGTIFAIEIFTEKKNWKSKGHGRV 60
Query: 61 QFESLDSKSKAQELALENDLLFKGCPLSLSSSHEDVVVRPIEPSCRGVRGDVYVGLMKEE 120
QFESLDSKSKAQELALENDLLFKGCPLSLSSSHEDVVVRPIEPSCRGVRGDVYVGLMKEE
Sbjct: 61 QFESLDSKSKAQELALENDLLFKGCPLSLSSSHEDVVVRPIEPSCRGVRGDVYVGLMKEE 120
Query: 121 DQMCVIDTLEDAKIWVMPDRNCVVFHLELEGKFYKMEVHFDDIFEAFGCYFDEQSPAILL 180
DQMCVIDTLEDAKIWVMPDRNCVVFHLELEGKFYKMEVHFDDIFEAFGCYFDEQSPAILL
Sbjct: 121 DQMCVIDTLEDAKIWVMPDRNCVVFHLELEGKFYKMEVHFDDIFEAFGCYFDEQSPAILL 180
Query: 181 KLKYAPKIYQRISGPNLYTRFTADRYHICKEDLEFIWVRTTDISKSNSIGLSSAFCWEIG 240
KLKYAPKIYQRISGPNLYTRFTADRYHICKEDLEFIWVRTTDISKSNSIGLSSAFCWEIG
Sbjct: 181 KLKYAPKIYQRISGPNLYTRFTADRYHICKEDLEFIWVRTTDISKSNSIGLSSAFCWEIG 240
Query: 241 EGSMGLDFFSTIPFYRKILENFVLEEYDEYSSVSGLVPLVKCENNLKLDYEILFQINSLV 300
EGSMGLDFFSTIPFYRKILENFVLEEYDEYSSVSGLVPLVKCENNLKLDYEILFQINSLV
Sbjct: 241 EGSMGLDFFSTIPFYRKILENFVLEEYDEYSSVSGLVPLVKCENNLKLDYEILFQINSLV 300
Query: 301 HTLKISLADVTTELIDFLSTLSIDRAHMVLQKVHKLSSTCYEPLSFIKTQVQALDDAQNS 360
HTLKISLADVTTELIDFLSTLSIDRAHMVLQKVHKLSSTCYEPLSFIKTQVQALDDAQNS
Sbjct: 301 HTLKISLADVTTELIDFLSTLSIDRAHMVLQKVHKLSSTCYEPLSFIKTQVQALDDAQNS 360
Query: 361 SLFVRSRLTNDNIMRCHRALVTPTKICLLGPELEASNYIVKNFSAHTSDFMRVTFVDEDW 420
SLFVRSRLTNDNIMRCHRALVTPTKICLLGPELEASNYIVKNFSAHTSDFMRVTFVDEDW
Sbjct: 361 SLFVRSRLTNDNIMRCHRALVTPTKICLLGPELEASNYIVKNFSAHTSDFMRVTFVDEDW 420
Query: 421 GKLHPMAVSVSTEQGIFSKPFRTDVYHRILSILREGIVIGDKRFEFLAFSASQLRSNSVW 480
GKLHPMAVSVSTEQGIFSKPFRTDVYHRILSILREGIVIGDKRFEFLAFSASQLRSNSVW
Sbjct: 421 GKLHPMAVSVSTEQGIFSKPFRTDVYHRILSILREGIVIGDKRFEFLAFSASQLRSNSVW 480
Query: 481 MFASNDKVKADDIREWMGSFNKIRSISKCAARMGQLFSAAWQTVVVPVQDVEVIPDIELN 540
MFASNDKVKADDIREWMGSFNKIRSISKCAARMGQLFSAAWQTVVVPVQDVEVIPDIELN
Sbjct: 481 MFASNDKVKADDIREWMGSFNKIRSISKCAARMGQLFSAAWQTVVVPVQDVEVIPDIELN 540
Query: 541 SDGIDYCFSDGIGKISLSFARQVAQKCGVEHTPSAFQIRYGGYKGVVAVDRNSFRKLSLR 600
SDGIDYCFSDGIGKISLSFARQVAQKCGVEHTPSAFQIRYGGYKGVVAVDRNSFRKLSLR
Sbjct: 541 SDGIDYCFSDGIGKISLSFARQVAQKCGVEHTPSAFQIRYGGYKGVVAVDRNSFRKLSLR 600
Query: 601 SSMLKFESKNRMLNVTKCNKSQSCYLNREIVTLLTTLGVEDSSLEALLQEHMRLLANTLT 660
SSMLKFESKNRMLNVTKCNKSQSCYLNREIVTLLTTLGVEDSSLEALLQEHMRLLANTLT
Sbjct: 601 SSMLKFESKNRMLNVTKCNKSQSCYLNREIVTLLTTLGVEDSSLEALLQEHMRLLANTLT 660
Query: 661 SRDAALALLESTDMGESKTLVKMLRHGFEPNSEPYLLMMLRAYLESQLSDLRGRCRLYVP 720
SRDAALALLESTDMGESKTLVKMLRHGFEPNSEPYLLMMLRAYLESQLSDLRGRCRLYVP
Sbjct: 661 SRDAALALLESTDMGESKTLVKMLRHGFEPNSEPYLLMMLRAYLESQLSDLRGRCRLYVP 720
Query: 721 KGRVLLGCLDETGILNYGQIFVRLTLRKTELENMDPSIFHKLDEKTAILTGTVVVTKNPC 780
KGRVLLGCLDETGILNYGQIFVRLTLRKTELENMDPSIFHKLDEKTAILTGTVVVTKNPC
Sbjct: 721 KGRVLLGCLDETGILNYGQIFVRLTLRKTELENMDPSIFHKLDEKTAILTGTVVVTKNPC 780
Query: 781 LHPGDVRVLEAVYEVALEEKGLIDCLIFPQKGERPHPNECSGGDLDGDLYFISWDEKLIP 840
LHPGDVRVLEAVYEVALEEKGLIDCLIFPQKGERPHPNECSGGDLDGDLYFISWDEKLIP
Sbjct: 781 LHPGDVRVLEAVYEVALEEKGLIDCLIFPQKGERPHPNECSGGDLDGDLYFISWDEKLIP 840
Query: 841 PRTVAPMDYTGCRPRIMDHDVTMEEIQRFFVDYMISDTLGTISTAHLVLADREPEKALSP 900
PRTVAPMDYTGCRPRIMDHDVTMEEIQRFFVDYMISDTLGTISTAHLVLADREPEKALSP
Sbjct: 841 PRTVAPMDYTGCRPRIMDHDVTMEEIQRFFVDYMISDTLGTISTAHLVLADREPEKALSP 900
Query: 901 KCLRLAELHSMAVDYAKTGAPAEMPNVLKPKEYPDFMERWDRPTYISQGILGKLYRATVS 960
KCLRLAELHSMAVDYAKTGAPAEMPNVLKPKEYPDFMERWDRPTYISQGILGKLYRATVS
Sbjct: 901 KCLRLAELHSMAVDYAKTGAPAEMPNVLKPKEYPDFMERWDRPTYISQGILGKLYRATVS 960
Query: 961 ATIPSSDFKWSEETARAAYDSDLEVPGFEAFIDTAKSCKEMYMEKMSMLLMFYGANSEDE 1020
ATIPSSDFKWSEETARAAYDSDLEVPGFEAFIDTAKSCKEMYMEKMSMLLMFYGANSEDE
Sbjct: 961 ATIPSSDFKWSEETARAAYDSDLEVPGFEAFIDTAKSCKEMYMEKMSMLLMFYGANSEDE 1020
Query: 1021 ILTGNLRSKSIYLRKDNRRYRELTDRILISVKSLQKEAKGWFENSCGEEDRQKMASAWYH 1080
ILTGNLRSKSIYLRKDNRRYRELTDRILISVKSLQKEAKGWFENSCGEEDRQKMASAWYH
Sbjct: 1021 ILTGNLRSKSIYLRKDNRRYRELTDRILISVKSLQKEAKGWFENSCGEEDRQKMASAWYH 1080
Query: 1081 VTYHPDHCHDSDNCLGFPWTVHDVLVTIKSANRKQP 1117
VTYHPDHCHDSDNCLGFPWTVHDVLVTIKSANRKQP
Sbjct: 1081 VTYHPDHCHDSDNCLGFPWTVHDVLVTIKSANRKQP 1116
BLAST of Spo04141.1 vs. NCBI nr
Match:
gi|731335445|ref|XP_010678731.1| (PREDICTED: RNA-dependent RNA polymerase 2 [Beta vulgaris subsp. vulgaris])
HSP 1 Score: 1963.7 bits (5086), Expect = 0.000e+0
Identity = 949/1115 (85.11%), Postives = 1038/1115 (93.09%), Query Frame = 1
Query: 1 MAIDRPTVERSTVRVSNIPTTATAQDIFDFLESKIGKGTIFAIEIFTEKKNWKSKGHGRV 60
MAIDRPTVER+T+++SNIP TATAQD+FDFLES IGK TIFA+EIFT+KKNWKSKGHGRV
Sbjct: 1 MAIDRPTVERTTLKISNIPLTATAQDLFDFLESTIGKATIFALEIFTDKKNWKSKGHGRV 60
Query: 61 QFESLDSKSKAQELALENDLLFKGCPLSLSSSHEDVVVRPIEPSCRGVRGDVYVGLMKEE 120
QFE+LD+KSKA +L+L+N+L F+G PLSLSSSHEDVVVRPI+P+ R GD+YVGLM E
Sbjct: 61 QFETLDAKSKATQLSLQNNLNFRGFPLSLSSSHEDVVVRPIDPNHRTKIGDLYVGLMSNE 120
Query: 121 DQMCVIDTLEDAKIWVMPDRNCVVFHLELEGKFYKMEVHFDDIFEAFGCYFDEQSPAILL 180
D MCVI+T E+ WVMPDR CV FH+E + K YK+EV FDDIFEAFGCYFD QSPAIL
Sbjct: 121 DNMCVIETFENVTFWVMPDRGCVEFHVEFDEKLYKLEVQFDDIFEAFGCYFDPQSPAILF 180
Query: 181 KLKYAPKIYQRISGPNLYTRFTADRYHICKEDLEFIWVRTTDISKSNSIGLSSAFCWEIG 240
KLKYAPKIYQ+ISGPNL TRF+ADRYHICKEDLEF+WVRTTDIS SIGLSSA CWEI
Sbjct: 181 KLKYAPKIYQKISGPNLRTRFSADRYHICKEDLEFLWVRTTDISNKKSIGLSSAICWEIE 240
Query: 241 EGSMGLDFFSTIPFYRKILENFVLEEYDEYSSVSGLVPLVKCENNLKLDYEILFQINSLV 300
EGSMGLDFFSTIPFY+K L +F+LEEYD+YSSVSGLVPLVKC N KLDYEILFQINSLV
Sbjct: 241 EGSMGLDFFSTIPFYKKTLNSFILEEYDDYSSVSGLVPLVKCGNISKLDYEILFQINSLV 300
Query: 301 HTLKISLADVTTELIDFLSTLSIDRAHMVLQKVHKLSSTCYEPLSFIKTQVQALDDAQNS 360
HTLKISLA VTTELIDFL+TLS+D A M LQK+HK SSTCYEPLSFIKTQVQALD+A+++
Sbjct: 301 HTLKISLAAVTTELIDFLTTLSLDTALMALQKLHKFSSTCYEPLSFIKTQVQALDNARSN 360
Query: 361 SLFVRSRLTNDNIMRCHRALVTPTKICLLGPELEASNYIVKNFSAHTSDFMRVTFVDEDW 420
SL RSRL NDNIMRCHRALVTPTKICLLGPELE+SNY+VKNF+A++SDFMRVTFVDEDW
Sbjct: 361 SLSARSRLKNDNIMRCHRALVTPTKICLLGPELESSNYVVKNFAAYSSDFMRVTFVDEDW 420
Query: 421 GKLHPMAVSVSTEQGIFSKPFRTDVYHRILSILREGIVIGDKRFEFLAFSASQLRSNSVW 480
G+LHP+ VS STEQGIFSKPFRTD+YHRILSILREGIVIG+KRFEFLAFSASQLRSNSVW
Sbjct: 421 GRLHPIVVSASTEQGIFSKPFRTDIYHRILSILREGIVIGNKRFEFLAFSASQLRSNSVW 480
Query: 481 MFASNDKVKADDIREWMGSFNKIRSISKCAARMGQLFSAAWQTVVVPVQDVEVIPDIELN 540
MFASNDKVKADDIREWMGSFNKIRS+SKCAARMGQLFSAA QT+VVPVQDVEVIPDI++N
Sbjct: 481 MFASNDKVKADDIREWMGSFNKIRSVSKCAARMGQLFSAARQTIVVPVQDVEVIPDIDIN 540
Query: 541 SDGIDYCFSDGIGKISLSFARQVAQKCGVEHTPSAFQIRYGGYKGVVAVDRNSFRKLSLR 600
+DGIDYCFSDGIGKISLSFARQVAQK GV+HTPSAFQIRYGGYKGV+AVDRNSFRKLSLR
Sbjct: 541 TDGIDYCFSDGIGKISLSFARQVAQKYGVDHTPSAFQIRYGGYKGVIAVDRNSFRKLSLR 600
Query: 601 SSMLKFESKNRMLNVTKCNKSQSCYLNREIVTLLTTLGVEDSSLEALLQEHMRLLANTLT 660
SSMLKFESKNRMLNVTKC KSQ+CYLNREIVTLLTTL V+D LEALLQ+HMRLL + LT
Sbjct: 601 SSMLKFESKNRMLNVTKCCKSQACYLNREIVTLLTTLEVKDDDLEALLQDHMRLLGSMLT 660
Query: 661 SRDAALALLESTDMGESKTLVKMLRHGFEPNSEPYLLMMLRAYLESQLSDLRGRCRLYVP 720
SRDAALA+LESTDMG+SKTL KMLRHG+EPN+EPYLLMMLRAYLESQLSDLRGRCR+Y+P
Sbjct: 661 SRDAALAVLESTDMGDSKTLSKMLRHGYEPNAEPYLLMMLRAYLESQLSDLRGRCRIYIP 720
Query: 721 KGRVLLGCLDETGILNYGQIFVRLTLRKTELENMDPSIFHKLDEKTAILTGTVVVTKNPC 780
KGRVLLGCLDETGILNYGQ+F R+TLRKTELEN+DPSIFHK+DEKTAILTG VVVTKNPC
Sbjct: 721 KGRVLLGCLDETGILNYGQVFARITLRKTELENVDPSIFHKVDEKTAILTGKVVVTKNPC 780
Query: 781 LHPGDVRVLEAVYEVALEEKGLIDCLIFPQKGERPHPNECSGGDLDGDLYFISWDEKLIP 840
LHPGDVRVLEAVYEVALEEKGL+DCLIFPQKGERPHPNECSGGDLDGDLYFISWDE+LIP
Sbjct: 781 LHPGDVRVLEAVYEVALEEKGLVDCLIFPQKGERPHPNECSGGDLDGDLYFISWDERLIP 840
Query: 841 PRTVAPMDYTGCRPRIMDHDVTMEEIQRFFVDYMISDTLGTISTAHLVLADREPEKALSP 900
P+TV PMDY+ RPRIMDHDVT++EIQ+FFVDYMI+DTLGTISTAHLVLADREPEKALSP
Sbjct: 841 PKTVPPMDYSASRPRIMDHDVTLKEIQQFFVDYMINDTLGTISTAHLVLADREPEKALSP 900
Query: 901 KCLRLAELHSMAVDYAKTGAPAEMPNVLKPKEYPDFMERWDRPTYISQGILGKLYRATVS 960
KCLRLA LHSMAVD+AK+GAPAEMP VLKPKEYPDFMERWD+PTYISQG+LGKLYRATV+
Sbjct: 901 KCLRLANLHSMAVDFAKSGAPAEMPRVLKPKEYPDFMERWDKPTYISQGVLGKLYRATVA 960
Query: 961 ATIPSSDFKWSEETARAAYDSDLEVPGFEAFIDTAKSCKEMYMEKMSMLLMFYGANSEDE 1020
+TIP SDF WSEETARAAYD DLEVPGFE FID AKSCKE+Y +KMS+LLMFYGAN+EDE
Sbjct: 961 STIPKSDFSWSEETARAAYDPDLEVPGFETFIDAAKSCKELYRDKMSVLLMFYGANTEDE 1020
Query: 1021 ILTGNLRSKSIYLRKDNRRYRELTDRILISVKSLQKEAKGWFENSCGEEDRQKMASAWYH 1080
ILTGNLRSKS YL++DNRRYRELTDRIL+SVKSLQ EAKGWFENSC +DRQKMASAWY
Sbjct: 1021 ILTGNLRSKSAYLQRDNRRYRELTDRILVSVKSLQNEAKGWFENSCKVQDRQKMASAWYR 1080
Query: 1081 VTYHPDHCHDSDNCLGFPWTVHDVLVTIKSANRKQ 1116
VTYHP HCHDS NCLGFPWTV DVL+TIKS NRKQ
Sbjct: 1081 VTYHPSHCHDSQNCLGFPWTVSDVLLTIKSDNRKQ 1115
BLAST of Spo04141.1 vs. NCBI nr
Match:
gi|565356369|ref|XP_006345040.1| (PREDICTED: RNA-dependent RNA polymerase 2 [Solanum tuberosum])
HSP 1 Score: 1466.8 bits (3796), Expect = 0.000e+0
Identity = 714/1108 (64.44%), Postives = 874/1108 (78.88%), Query Frame = 1
Query: 11 STVRVSNIPTTATAQDIFDFLESKIGKGTIFAIEIFTEKKNWKSKGHGRVQFESLDSKSK 70
+TVRVSNIP +A A+D+FDF +S IGKG++FA +IF+E KNWKS+GHGRVQFE+L K
Sbjct: 9 ATVRVSNIPQSAIAKDLFDFFDSLIGKGSVFACDIFSEHKNWKSRGHGRVQFETLQDKLH 68
Query: 71 AQELALENDLLFKGCPLSLSSSHEDVVVRPIEPSCRGVRGDVYVGLMKEEDQMCVIDTLE 130
L+ + +LLFKG LSL SS +D++ RP+EP CR G ++ GL+ + D M V++T E
Sbjct: 69 CLSLSEQGNLLFKGHQLSLVSSFDDIIARPVEPKCRFQDGILHTGLLVKNDVMQVLETWE 128
Query: 131 DAKIWVMPDRNCVVFHLELEGKFYKMEVHFDDIFEAFGCYFDEQSPAILLKLKYAPKIYQ 190
D K +MP+R C+ F + + Y++EV F D+ EA C + Q A+LLKLK+APK+YQ
Sbjct: 129 DVKTLIMPERKCLEFWVSHAEECYRLEVQFGDVVEATVCSLENQKSALLLKLKHAPKLYQ 188
Query: 191 RISGPNLYTRFTADRYHICKEDLEFIWVRTTDISKSNSIGLSSAFCWEIGEGSMGLDFFS 250
R+SGP + ++F+ADRYHICKED EF+WVRTTD S SIG SS+ CWE +G + D S
Sbjct: 189 RVSGPAVASKFSADRYHICKEDCEFLWVRTTDFSNIKSIGCSSSLCWETEDGWLSSDLLS 248
Query: 251 TIPFYRKILENFVLEEYDEYSSVSGLVPLVKCENNLKLDYEILFQINSLVHTLKISLADV 310
++P K + + L++ + S S VPLV+ ++LKL YEILFQ+NSLV T KISL V
Sbjct: 249 SLPCCNKDVIDLDLDKVGDIYSGSEFVPLVRIPSDLKLPYEILFQLNSLVQTQKISLGAV 308
Query: 311 TTELIDFLSTLSIDRAHMVLQKVHKLSSTCYEPLSFIKTQVQALDDAQNSSLFVR-SRLT 370
+LI+ LS L +D A M+LQK+HKL STC+EPL+FIKT++ L + L SRL
Sbjct: 309 NPDLIEVLSKLELDTAMMILQKMHKLQSTCFEPLTFIKTRLHVLGKNNKNQLSSSYSRLV 368
Query: 371 NDNIMRCHRALVTPTKICLLGPELEASNYIVKNFSAHTSDFMRVTFVDEDWGKLHPMAVS 430
N ++M HR LVTP+KI LGPELE SNYIVKNF+ H SDF+RVTFV+EDWGKL P AVS
Sbjct: 369 NHSMMSVHRVLVTPSKIYCLGPELETSNYIVKNFAEHASDFLRVTFVEEDWGKLFPNAVS 428
Query: 431 VSTEQGIFSKPFRTDVYHRILSILREGIVIGDKRFEFLAFSASQLRSNSVWMFASNDKVK 490
+S EQGIF+KP+RT +YHRILSILREGIVIG KRF FLAFSASQLRSNSVWMFASN+ VK
Sbjct: 429 MSVEQGIFAKPYRTKIYHRILSILREGIVIGTKRFFFLAFSASQLRSNSVWMFASNEYVK 488
Query: 491 ADDIREWMGSFNKIRSISKCAARMGQLFSAAWQTVVVPVQDVEVIPDIELNSDGIDYCFS 550
A+DIREWMG FNKIRSISKCAARMGQLFS + QT+ V +Q VE++PDIE+ SDG+ YCFS
Sbjct: 489 AEDIREWMGCFNKIRSISKCAARMGQLFSTSVQTMEVQLQHVEILPDIEVTSDGVSYCFS 548
Query: 551 DGIGKISLSFARQVAQKCGVEHTPSAFQIRYGGYKGVVAVDRNSFRKLSLRSSMLKFESK 610
DGIGKIS +FARQVAQKCG+ HTPSAFQIRYGGYKGV+AVDRNSFRKLSLR SMLKFESK
Sbjct: 549 DGIGKISQAFARQVAQKCGLNHTPSAFQIRYGGYKGVIAVDRNSFRKLSLRGSMLKFESK 608
Query: 611 NRMLNVTKCNKSQSCYLNREIVTLLTTLGVEDSSLEALLQEHMRLLANTLTSRDAALALL 670
NRMLN+TK + + CYLNREIV LL+TLGVED +LE LL H+RLL LT+ +AAL +L
Sbjct: 609 NRMLNITKWSDAMPCYLNREIVILLSTLGVEDKALEDLLDNHLRLLGKMLTTNEAALDVL 668
Query: 671 ESTDMGE-SKTLVKMLRHGFEPNSEPYLLMMLRAYLESQLSDLRGRCRLYVPKGRVLLGC 730
ES G+ K L++ML G+ PN EPYL MML+++ E+Q+SDLR RCR+++PKGR+L+GC
Sbjct: 669 ESMGGGDVKKILMRMLLQGYAPNREPYLSMMLQSHFENQISDLRSRCRIFIPKGRILVGC 728
Query: 731 LDETGILNYGQIFVRLTLRKTELENMDPSIFHKLDEKTAILTGTVVVTKNPCLHPGDVRV 790
LDETGIL YG+++VR+T+ K EL+N + F K+DE TA++ G VVVTKNPCLHPGDVRV
Sbjct: 729 LDETGILKYGEVYVRITMTKAELQNGQQNFFQKVDETTAVVRGKVVVTKNPCLHPGDVRV 788
Query: 791 LEAVYEVALEEKGLIDCLIFPQKGERPHPNECSGGDLDGDLYFISWDEKLIPPRTVAPMD 850
LEAVYEV LEEK +DC+IFPQ GERPHPNECSGGDLDGDLYFI WDE LIP +TV PMD
Sbjct: 789 LEAVYEVTLEEKTWVDCIIFPQNGERPHPNECSGGDLDGDLYFICWDESLIPHQTVTPMD 848
Query: 851 YTGCRPRIMDHDVTMEEIQRFFVDYMISDTLGTISTAHLVLADREPEKALSPKCLRLAEL 910
YTG RPRIMDH+VT+EEIQRFFVDYMISDTLG ISTAHLV ADREP+KAL+ KCL+LA L
Sbjct: 849 YTGRRPRIMDHEVTLEEIQRFFVDYMISDTLGAISTAHLVHADREPDKALNSKCLQLATL 908
Query: 911 HSMAVDYAKTGAPAEMPNVLKPKEYPDFMERWDRPTYISQGILGKLYRATVSATI-PSSD 970
HSMAVD+AKTGA AEMP LKP+E+PDFMERWD+P YIS+G+LGKLYR + + I +SD
Sbjct: 909 HSMAVDFAKTGAAAEMPRFLKPREFPDFMERWDKPMYISEGVLGKLYRGVIKSYIRRNSD 968
Query: 971 FKWSEETARAAYDSDLEVPGFEAFIDTAKSCKEMYMEKMSMLLMFYGANSEDEILTGNLR 1030
++ + AYD DL V G+EAFI+TAK+ KEMY++ M+ LL +YGA E EILTGNLR
Sbjct: 969 DLSTDRAIQDAYDHDLLVEGYEAFIETAKTHKEMYLDSMNSLLNYYGAEKEVEILTGNLR 1028
Query: 1031 SKSIYLRKDNRRYRELTDRILISVKSLQKEAKGWFENSCGEEDRQKMASAWYHVTYHPDH 1090
KS+YL++DNRRY EL DRIL+S KSL KE KGWF C E+D QK+ SAWYHVTYHP +
Sbjct: 1029 QKSVYLQRDNRRYFELKDRILVSAKSLHKEVKGWFSGCCTEDDHQKLVSAWYHVTYHPSY 1088
Query: 1091 CHDSDNCLGFPWTVHDVLVTIKSANRKQ 1116
CH+S NCLGFPW V D+L+ IKS N ++
Sbjct: 1089 CHESANCLGFPWVVGDILLNIKSHNTRK 1116
BLAST of Spo04141.1 vs. NCBI nr
Match:
gi|970018979|ref|XP_015070676.1| (PREDICTED: RNA-dependent RNA polymerase 2 [Solanum pennellii])
HSP 1 Score: 1462.6 bits (3785), Expect = 0.000e+0
Identity = 715/1111 (64.36%), Postives = 875/1111 (78.76%), Query Frame = 1
Query: 11 STVRVSNIPTTATAQDIFDFLESKIGKGTIFAIEIFTEKKNWKSKGHGRVQFESLDSKSK 70
+TVRVSNIP +A A+D+F+F +S IGKG++FA +I +E KNWKS+GHGRVQFE+L K
Sbjct: 9 ATVRVSNIPQSAIAKDLFNFFDSLIGKGSVFACDIHSEHKNWKSRGHGRVQFETLQDKLH 68
Query: 71 AQELALENDLLFKGCPLSLSSSHEDVVVRPIEPSCRGVRGDVYVGLMKEEDQMCVIDTLE 130
LA + +LLFKG LSL SS +D++ RP+EP CR G ++ GL+ E+D M V++T E
Sbjct: 69 CLSLAEQGNLLFKGHQLSLVSSFDDIITRPVEPKCRFQAGILHTGLLVEKDVMQVLETWE 128
Query: 131 DAKIWVMPDRNCVVFHLELEGKFYKMEVHFDDIFEAFGCYFDEQSPAILLKLKYAPKIYQ 190
D K +MP+R C+ F + + Y++EV F D+ E C + Q A+LLKLK+APK+YQ
Sbjct: 129 DVKTLIMPERKCLEFWVSHAEECYRLEVQFGDVTEGTLCSLENQKSALLLKLKHAPKLYQ 188
Query: 191 RISGPNLYTRFTADRYHICKEDLEFIWVRTTDISKSNSIGLSSAFCWEIGEGSMGLDFFS 250
R+SGP + ++F+ADRYHICKED EF+W+RTTD S SIG SS+ CWE +G + D FS
Sbjct: 189 RVSGPAVASKFSADRYHICKEDCEFLWIRTTDFSNIKSIGCSSSLCWETEDGWLSSDLFS 248
Query: 251 TIPFYRKILENFVLEEYDEYSSVSGLVPLVKCENNLKLDYEILFQINSLVHTLKISLADV 310
++P + + + L++ + S S VPLV+ ++LKL YEILFQ+NSLV T KISL +
Sbjct: 249 SLPCCNQDVIDLDLDKVGDIYSGSEFVPLVRIPSDLKLPYEILFQLNSLVQTQKISLGAI 308
Query: 311 TTELIDFLSTLSIDRAHMVLQKVHKLSSTCYEPLSFIKTQVQAL---DDAQNSSLFVRSR 370
LI+ LS L +D A M+LQK+HKL S C++PL FIKT++ L D Q SS + SR
Sbjct: 309 NPNLIEVLSKLELDTAMMILQKMHKLQSICFDPLLFIKTRLHVLGKNDKNQPSSSY--SR 368
Query: 371 LTNDNIMRCHRALVTPTKICLLGPELEASNYIVKNFSAHTSDFMRVTFVDEDWGKLHPMA 430
L N ++M HR LVTP+KI LGPELE SNYIVKNF+AH SDF+RVTFV+EDWGKL P A
Sbjct: 369 LVNHSMMSVHRVLVTPSKIYCLGPELETSNYIVKNFAAHASDFLRVTFVEEDWGKLFPNA 428
Query: 431 VSVSTEQGIFSKPFRTDVYHRILSILREGIVIGDKRFEFLAFSASQLRSNSVWMFASNDK 490
VS+S EQGIF+KP+RT +YHRILSILREGIVIG KRF FLAFSASQLRSNSVWMFASN+
Sbjct: 429 VSMSVEQGIFAKPYRTKIYHRILSILREGIVIGTKRFFFLAFSASQLRSNSVWMFASNEY 488
Query: 491 VKADDIREWMGSFNKIRSISKCAARMGQLFSAAWQTVVVPVQDVEVIPDIELNSDGIDYC 550
VKA+DIREWMG FNKIRSISKCAARMGQLFS + QT+ V +Q VE++PDIE+ SDG+ YC
Sbjct: 489 VKAEDIREWMGCFNKIRSISKCAARMGQLFSTSVQTMEVKLQHVEILPDIEVTSDGVSYC 548
Query: 551 FSDGIGKISLSFARQVAQKCGVEHTPSAFQIRYGGYKGVVAVDRNSFRKLSLRSSMLKFE 610
FSDGIGKIS +FARQVAQKCG+ HTPSAFQIRYGGYKGV+AVDRNSFRKLSLR SMLKFE
Sbjct: 549 FSDGIGKISQAFARQVAQKCGLNHTPSAFQIRYGGYKGVIAVDRNSFRKLSLRGSMLKFE 608
Query: 611 SKNRMLNVTKCNKSQSCYLNREIVTLLTTLGVEDSSLEALLQEHMRLLANTLTSRDAALA 670
SKNRMLN+TK + + CYLNREIV LL+TLGVED S E LL H+ LL LT+ +AAL
Sbjct: 609 SKNRMLNITKWSDAMPCYLNREIVILLSTLGVEDKSFEDLLDNHLCLLGKMLTTNEAALD 668
Query: 671 LLESTDMGE-SKTLVKMLRHGFEPNSEPYLLMMLRAYLESQLSDLRGRCRLYVPKGRVLL 730
+LES GE K L++ML G+ PN EPYL MML+++ E+Q+SDLR RCR+++PKGR+L+
Sbjct: 669 VLESMGGGEVKKILMRMLLQGYAPNQEPYLSMMLQSHFENQISDLRSRCRIFIPKGRILV 728
Query: 731 GCLDETGILNYGQIFVRLTLRKTELENMDPSIFHKLDEKTAILTGTVVVTKNPCLHPGDV 790
GCLDETGIL YGQ++VR+T+ K EL+N + F K+DE TA++ G VVVTKNPCLHPGDV
Sbjct: 729 GCLDETGILKYGQVYVRITMTKAELQNGQQNFFQKVDETTAVVRGKVVVTKNPCLHPGDV 788
Query: 791 RVLEAVYEVALEEKGLIDCLIFPQKGERPHPNECSGGDLDGDLYFISWDEKLIPPRTVAP 850
RVLEAVYEV LEEK +DC+IFPQKGERPHPNECSGGDLDGDLYFI WDE LIP +TV P
Sbjct: 789 RVLEAVYEVTLEEKTWVDCIIFPQKGERPHPNECSGGDLDGDLYFICWDESLIPCQTVTP 848
Query: 851 MDYTGCRPRIMDHDVTMEEIQRFFVDYMISDTLGTISTAHLVLADREPEKALSPKCLRLA 910
MDYTG RPRIMDH+VT+EEIQRFFVDYMISDTLG ISTAHLV ADREP+KAL+ KCL+LA
Sbjct: 849 MDYTGRRPRIMDHEVTLEEIQRFFVDYMISDTLGAISTAHLVHADREPDKALNSKCLQLA 908
Query: 911 ELHSMAVDYAKTGAPAEMPNVLKPKEYPDFMERWDRPTYISQGILGKLYRATVSATI-PS 970
LHSMAVD+AKTGA AEMP LKP+E+PDFMERWD+P YIS+G+LGKLYR + + I +
Sbjct: 909 TLHSMAVDFAKTGAAAEMPRFLKPREFPDFMERWDKPMYISEGVLGKLYRGVIKSYIRKN 968
Query: 971 SDFKWSEETARAAYDSDLEVPGFEAFIDTAKSCKEMYMEKMSMLLMFYGANSEDEILTGN 1030
SD ++ + AYD DL V G+EAF +TAK+ K MY++ M+ LL +YGA E EILTGN
Sbjct: 969 SDDLSADRAIQDAYDHDLLVEGYEAFTETAKTHKAMYLDSMNSLLNYYGAEKEVEILTGN 1028
Query: 1031 LRSKSIYLRKDNRRYRELTDRILISVKSLQKEAKGWFENSCGEEDRQKMASAWYHVTYHP 1090
LR KS+YL++DNRRY EL DRIL+S KSL KE KGWF + C E+D QK+ASAWYHVTYHP
Sbjct: 1029 LRQKSVYLQRDNRRYFELKDRILVSAKSLHKEVKGWFTSCCQEDDHQKLASAWYHVTYHP 1088
Query: 1091 DHCHDSDNCLGFPWTVHDVLVTIKSANRKQP 1117
+CH+S NCLGFPW V D+L+ IKS N ++P
Sbjct: 1089 SYCHESANCLGFPWVVGDILLNIKSHNTRKP 1117
BLAST of Spo04141.1 vs. NCBI nr
Match:
gi|697138450|ref|XP_009623301.1| (PREDICTED: RNA-dependent RNA polymerase 2 [Nicotiana tomentosiformis])
HSP 1 Score: 1454.5 bits (3764), Expect = 0.000e+0
Identity = 704/1109 (63.48%), Postives = 880/1109 (79.35%), Query Frame = 1
Query: 11 STVRVSNIPTTATAQDIFDFLESKIGKGTIFAIEIFTEKKNWKSKGHGRVQFESLDSKSK 70
+TVRVSNIP TA A+ +FDF ES IGKG++FA +IF+E KNWKS+GHGRVQFE+ SK +
Sbjct: 9 ATVRVSNIPQTAIAKQLFDFFESSIGKGSVFACDIFSEHKNWKSRGHGRVQFETAQSKLQ 68
Query: 71 AQELALENDLLFKGCPLSLSSSHEDVVVRPIEPSCRGVRGDVYVGLMKEEDQMCVIDTLE 130
+ L+ + L+FKG L L+SS +D++ RPIEP+ R +G ++ G++ + D M V++T E
Sbjct: 69 SLSLSEQGKLVFKGHQLILTSSFDDIIARPIEPNYRFQKGILHTGVLLKNDYMEVLETWE 128
Query: 131 DAKIWVMPDRNCVVFHLE-LEGKFYKMEVHFDDIFEAFGCYFDEQSPAILLKLKYAPKIY 190
+ K +MP+R + F + +G+ Y++EV F DI E GC +++ PA+LLKLK+APK+Y
Sbjct: 129 NVKTLIMPERKSLEFWVSHAKGECYRLEVQFGDIIETCGCSLEDEKPALLLKLKHAPKLY 188
Query: 191 QRISGPNLYTRFTADRYHICKEDLEFIWVRTTDISKSNSIGLSSAFCWEIGEGSMGLDFF 250
QR+SGP + ++F++DRYH+CKED EF+WVRTTD S SIG SS+ CWEI +G + D
Sbjct: 189 QRVSGPGVASKFSSDRYHVCKEDCEFLWVRTTDFSAMKSIGCSSSLCWEIEDGLLSSDLL 248
Query: 251 STIPFYRKILENFVLEEYDEYSSVSGLVPLVKCENNLKLDYEILFQINSLVHTLKISLAD 310
S++P+ + + VL+E + S S LVPL ++LKL YEILFQ+NSLVHT KISL
Sbjct: 249 SSLPYCNNDVMDLVLDEVGDIYSASELVPLASFPSDLKLPYEILFQLNSLVHTHKISLGA 308
Query: 311 VTTELIDFLSTLSIDRAHMVLQKVHKLSSTCYEPLSFIKTQVQALD-DAQNSSLFVRSRL 370
V T+LI+ LS L +D A M+LQK+HKL S+C+EP+ FIKT++ L +++N SRL
Sbjct: 309 VKTDLIEVLSKLELDTAMMILQKMHKLQSSCFEPVPFIKTRLHVLGKNSKNQPSSSYSRL 368
Query: 371 TNDNIMRCHRALVTPTKICLLGPELEASNYIVKNFSAHTSDFMRVTFVDEDWGKLHPMAV 430
N N+M HR LVTP+K+ LGPELE SNYIVKNF++H SDF+RVTFV+EDW KL P A+
Sbjct: 369 VNQNMMSVHRVLVTPSKVYCLGPELETSNYIVKNFASHASDFLRVTFVEEDWSKLSPNAI 428
Query: 431 SVSTEQGIFSKPFRTDVYHRILSILREGIVIGDKRFEFLAFSASQLRSNSVWMFASNDKV 490
S+S EQGIF+KP+RT +YHRILSILR+G+VIG KRF FLAFSASQLRSNSVWMFASN+ V
Sbjct: 429 SISVEQGIFAKPYRTKIYHRILSILRDGLVIGTKRFLFLAFSASQLRSNSVWMFASNEYV 488
Query: 491 KADDIREWMGSFNKIRSISKCAARMGQLFSAAWQTVVVPVQDVEVIPDIELNSDGIDYCF 550
KA+DIREWMG FNKIRS+SKCAARMGQLFS ++QT+ V VE++PDIE+ SDG+ YCF
Sbjct: 489 KAEDIREWMGYFNKIRSVSKCAARMGQLFSTSFQTMEVQSPHVEILPDIEVTSDGVSYCF 548
Query: 551 SDGIGKISLSFARQVAQKCGVEHTPSAFQIRYGGYKGVVAVDRNSFRKLSLRSSMLKFES 610
SDGIGKIS +FA QVAQKCG+ +TPSAFQIRYGGYKGV+AVDRNS+RKLSLR SMLKFES
Sbjct: 549 SDGIGKISQAFASQVAQKCGLSYTPSAFQIRYGGYKGVIAVDRNSYRKLSLRGSMLKFES 608
Query: 611 KNRMLNVTKCNKSQSCYLNREIVTLLTTLGVEDSSLEALLQEHMRLLANTLTSRDAALAL 670
KN+MLN+TK + + CYLNREIV LL TLGVED LE LL H+ LL LT+ +AAL +
Sbjct: 609 KNKMLNITKWSDAMPCYLNREIVILLATLGVEDKVLEDLLDNHLHLLGKMLTTNEAALDV 668
Query: 671 LESTDMGESK-TLVKMLRHGFEPNSEPYLLMMLRAYLESQLSDLRGRCRLYVPKGRVLLG 730
LES G+ K L++ML G+ PN EPYL MML+++ E+QLSDLR RCR+++PKGRVL+G
Sbjct: 669 LESIGGGDVKRILMRMLHQGYAPNLEPYLSMMLQSHFENQLSDLRSRCRIFIPKGRVLVG 728
Query: 731 CLDETGILNYGQIFVRLTLRKTELENMDPSIFHKLDEKTAILTGTVVVTKNPCLHPGDVR 790
CLDETGILNYGQ++ R+T+ K EL++ + F K+DE TA++ G VVVTKNPCLHPGDVR
Sbjct: 729 CLDETGILNYGQVYARITMTKAELQSGQQNFFQKVDETTAVVRGKVVVTKNPCLHPGDVR 788
Query: 791 VLEAVYEVALEEKGLIDCLIFPQKGERPHPNECSGGDLDGDLYFISWDEKLIPPRTVAPM 850
VLEAVYEVALEEK +DC+IFPQKGERPHPNECSGGDLDGDLYFISWDE LIP +TV PM
Sbjct: 789 VLEAVYEVALEEKAWVDCIIFPQKGERPHPNECSGGDLDGDLYFISWDENLIPRQTVTPM 848
Query: 851 DYTGCRPRIMDHDVTMEEIQRFFVDYMISDTLGTISTAHLVLADREPEKALSPKCLRLAE 910
DYTG +PRIMDH+VT+EEIQRFFVDYMISDTLG ISTAHLV ADREP+KAL+PKCL+LA
Sbjct: 849 DYTGRKPRIMDHEVTLEEIQRFFVDYMISDTLGAISTAHLVHADREPDKALNPKCLQLAT 908
Query: 911 LHSMAVDYAKTGAPAEMPNVLKPKEYPDFMERWDRPTYISQGILGKLYRATVSATI-PSS 970
LHSMAVD+AKTGA AEMP LKP+E+PDF+ERWD+P YIS+G+LGKLYRA V +++ +S
Sbjct: 909 LHSMAVDFAKTGAAAEMPRFLKPREFPDFLERWDKPMYISEGVLGKLYRAIVKSSVRGNS 968
Query: 971 DFKWSEETARAAYDSDLEVPGFEAFIDTAKSCKEMYMEKMSMLLMFYGANSEDEILTGNL 1030
D S + AYD DL G+EAFI TAK+ KEMY+++M+ LL +YGA E EILTGNL
Sbjct: 969 DDLGSVRAIQDAYDHDLLFEGYEAFIVTAKNHKEMYLDRMNSLLNYYGAEKEVEILTGNL 1028
Query: 1031 RSKSIYLRKDNRRYRELTDRILISVKSLQKEAKGWFENSCGEEDRQKMASAWYHVTYHPD 1090
R KS+YL++DNRRY EL DRIL+S KSLQKE KGWF C E++++K+ASAWY VTYHP
Sbjct: 1029 RQKSVYLQRDNRRYFELKDRILVSAKSLQKEVKGWFTGCCKEDEKKKLASAWYQVTYHPS 1088
Query: 1091 HCHDSDNCLGFPWTVHDVLVTIKSANRKQ 1116
+C S NCLGFPW V DVL+ IK N ++
Sbjct: 1089 YCQGSANCLGFPWVVGDVLLDIKLHNTRK 1117
BLAST of Spo04141.1 vs. UniProtKB/TrEMBL
Match:
A0A0K9RCQ7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_081360 PE=4 SV=1)
HSP 1 Score: 2255.3 bits (5843), Expect = 0.000e+0
Identity = 1116/1116 (100.00%), Postives = 1116/1116 (100.00%), Query Frame = 1
Query: 1 MAIDRPTVERSTVRVSNIPTTATAQDIFDFLESKIGKGTIFAIEIFTEKKNWKSKGHGRV 60
MAIDRPTVERSTVRVSNIPTTATAQDIFDFLESKIGKGTIFAIEIFTEKKNWKSKGHGRV
Sbjct: 1 MAIDRPTVERSTVRVSNIPTTATAQDIFDFLESKIGKGTIFAIEIFTEKKNWKSKGHGRV 60
Query: 61 QFESLDSKSKAQELALENDLLFKGCPLSLSSSHEDVVVRPIEPSCRGVRGDVYVGLMKEE 120
QFESLDSKSKAQELALENDLLFKGCPLSLSSSHEDVVVRPIEPSCRGVRGDVYVGLMKEE
Sbjct: 61 QFESLDSKSKAQELALENDLLFKGCPLSLSSSHEDVVVRPIEPSCRGVRGDVYVGLMKEE 120
Query: 121 DQMCVIDTLEDAKIWVMPDRNCVVFHLELEGKFYKMEVHFDDIFEAFGCYFDEQSPAILL 180
DQMCVIDTLEDAKIWVMPDRNCVVFHLELEGKFYKMEVHFDDIFEAFGCYFDEQSPAILL
Sbjct: 121 DQMCVIDTLEDAKIWVMPDRNCVVFHLELEGKFYKMEVHFDDIFEAFGCYFDEQSPAILL 180
Query: 181 KLKYAPKIYQRISGPNLYTRFTADRYHICKEDLEFIWVRTTDISKSNSIGLSSAFCWEIG 240
KLKYAPKIYQRISGPNLYTRFTADRYHICKEDLEFIWVRTTDISKSNSIGLSSAFCWEIG
Sbjct: 181 KLKYAPKIYQRISGPNLYTRFTADRYHICKEDLEFIWVRTTDISKSNSIGLSSAFCWEIG 240
Query: 241 EGSMGLDFFSTIPFYRKILENFVLEEYDEYSSVSGLVPLVKCENNLKLDYEILFQINSLV 300
EGSMGLDFFSTIPFYRKILENFVLEEYDEYSSVSGLVPLVKCENNLKLDYEILFQINSLV
Sbjct: 241 EGSMGLDFFSTIPFYRKILENFVLEEYDEYSSVSGLVPLVKCENNLKLDYEILFQINSLV 300
Query: 301 HTLKISLADVTTELIDFLSTLSIDRAHMVLQKVHKLSSTCYEPLSFIKTQVQALDDAQNS 360
HTLKISLADVTTELIDFLSTLSIDRAHMVLQKVHKLSSTCYEPLSFIKTQVQALDDAQNS
Sbjct: 301 HTLKISLADVTTELIDFLSTLSIDRAHMVLQKVHKLSSTCYEPLSFIKTQVQALDDAQNS 360
Query: 361 SLFVRSRLTNDNIMRCHRALVTPTKICLLGPELEASNYIVKNFSAHTSDFMRVTFVDEDW 420
SLFVRSRLTNDNIMRCHRALVTPTKICLLGPELEASNYIVKNFSAHTSDFMRVTFVDEDW
Sbjct: 361 SLFVRSRLTNDNIMRCHRALVTPTKICLLGPELEASNYIVKNFSAHTSDFMRVTFVDEDW 420
Query: 421 GKLHPMAVSVSTEQGIFSKPFRTDVYHRILSILREGIVIGDKRFEFLAFSASQLRSNSVW 480
GKLHPMAVSVSTEQGIFSKPFRTDVYHRILSILREGIVIGDKRFEFLAFSASQLRSNSVW
Sbjct: 421 GKLHPMAVSVSTEQGIFSKPFRTDVYHRILSILREGIVIGDKRFEFLAFSASQLRSNSVW 480
Query: 481 MFASNDKVKADDIREWMGSFNKIRSISKCAARMGQLFSAAWQTVVVPVQDVEVIPDIELN 540
MFASNDKVKADDIREWMGSFNKIRSISKCAARMGQLFSAAWQTVVVPVQDVEVIPDIELN
Sbjct: 481 MFASNDKVKADDIREWMGSFNKIRSISKCAARMGQLFSAAWQTVVVPVQDVEVIPDIELN 540
Query: 541 SDGIDYCFSDGIGKISLSFARQVAQKCGVEHTPSAFQIRYGGYKGVVAVDRNSFRKLSLR 600
SDGIDYCFSDGIGKISLSFARQVAQKCGVEHTPSAFQIRYGGYKGVVAVDRNSFRKLSLR
Sbjct: 541 SDGIDYCFSDGIGKISLSFARQVAQKCGVEHTPSAFQIRYGGYKGVVAVDRNSFRKLSLR 600
Query: 601 SSMLKFESKNRMLNVTKCNKSQSCYLNREIVTLLTTLGVEDSSLEALLQEHMRLLANTLT 660
SSMLKFESKNRMLNVTKCNKSQSCYLNREIVTLLTTLGVEDSSLEALLQEHMRLLANTLT
Sbjct: 601 SSMLKFESKNRMLNVTKCNKSQSCYLNREIVTLLTTLGVEDSSLEALLQEHMRLLANTLT 660
Query: 661 SRDAALALLESTDMGESKTLVKMLRHGFEPNSEPYLLMMLRAYLESQLSDLRGRCRLYVP 720
SRDAALALLESTDMGESKTLVKMLRHGFEPNSEPYLLMMLRAYLESQLSDLRGRCRLYVP
Sbjct: 661 SRDAALALLESTDMGESKTLVKMLRHGFEPNSEPYLLMMLRAYLESQLSDLRGRCRLYVP 720
Query: 721 KGRVLLGCLDETGILNYGQIFVRLTLRKTELENMDPSIFHKLDEKTAILTGTVVVTKNPC 780
KGRVLLGCLDETGILNYGQIFVRLTLRKTELENMDPSIFHKLDEKTAILTGTVVVTKNPC
Sbjct: 721 KGRVLLGCLDETGILNYGQIFVRLTLRKTELENMDPSIFHKLDEKTAILTGTVVVTKNPC 780
Query: 781 LHPGDVRVLEAVYEVALEEKGLIDCLIFPQKGERPHPNECSGGDLDGDLYFISWDEKLIP 840
LHPGDVRVLEAVYEVALEEKGLIDCLIFPQKGERPHPNECSGGDLDGDLYFISWDEKLIP
Sbjct: 781 LHPGDVRVLEAVYEVALEEKGLIDCLIFPQKGERPHPNECSGGDLDGDLYFISWDEKLIP 840
Query: 841 PRTVAPMDYTGCRPRIMDHDVTMEEIQRFFVDYMISDTLGTISTAHLVLADREPEKALSP 900
PRTVAPMDYTGCRPRIMDHDVTMEEIQRFFVDYMISDTLGTISTAHLVLADREPEKALSP
Sbjct: 841 PRTVAPMDYTGCRPRIMDHDVTMEEIQRFFVDYMISDTLGTISTAHLVLADREPEKALSP 900
Query: 901 KCLRLAELHSMAVDYAKTGAPAEMPNVLKPKEYPDFMERWDRPTYISQGILGKLYRATVS 960
KCLRLAELHSMAVDYAKTGAPAEMPNVLKPKEYPDFMERWDRPTYISQGILGKLYRATVS
Sbjct: 901 KCLRLAELHSMAVDYAKTGAPAEMPNVLKPKEYPDFMERWDRPTYISQGILGKLYRATVS 960
Query: 961 ATIPSSDFKWSEETARAAYDSDLEVPGFEAFIDTAKSCKEMYMEKMSMLLMFYGANSEDE 1020
ATIPSSDFKWSEETARAAYDSDLEVPGFEAFIDTAKSCKEMYMEKMSMLLMFYGANSEDE
Sbjct: 961 ATIPSSDFKWSEETARAAYDSDLEVPGFEAFIDTAKSCKEMYMEKMSMLLMFYGANSEDE 1020
Query: 1021 ILTGNLRSKSIYLRKDNRRYRELTDRILISVKSLQKEAKGWFENSCGEEDRQKMASAWYH 1080
ILTGNLRSKSIYLRKDNRRYRELTDRILISVKSLQKEAKGWFENSCGEEDRQKMASAWYH
Sbjct: 1021 ILTGNLRSKSIYLRKDNRRYRELTDRILISVKSLQKEAKGWFENSCGEEDRQKMASAWYH 1080
Query: 1081 VTYHPDHCHDSDNCLGFPWTVHDVLVTIKSANRKQP 1117
VTYHPDHCHDSDNCLGFPWTVHDVLVTIKSANRKQP
Sbjct: 1081 VTYHPDHCHDSDNCLGFPWTVHDVLVTIKSANRKQP 1116
BLAST of Spo04141.1 vs. UniProtKB/TrEMBL
Match:
A0A0J8CAC7_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g116660 PE=4 SV=1)
HSP 1 Score: 1963.7 bits (5086), Expect = 0.000e+0
Identity = 949/1115 (85.11%), Postives = 1038/1115 (93.09%), Query Frame = 1
Query: 1 MAIDRPTVERSTVRVSNIPTTATAQDIFDFLESKIGKGTIFAIEIFTEKKNWKSKGHGRV 60
MAIDRPTVER+T+++SNIP TATAQD+FDFLES IGK TIFA+EIFT+KKNWKSKGHGRV
Sbjct: 1 MAIDRPTVERTTLKISNIPLTATAQDLFDFLESTIGKATIFALEIFTDKKNWKSKGHGRV 60
Query: 61 QFESLDSKSKAQELALENDLLFKGCPLSLSSSHEDVVVRPIEPSCRGVRGDVYVGLMKEE 120
QFE+LD+KSKA +L+L+N+L F+G PLSLSSSHEDVVVRPI+P+ R GD+YVGLM E
Sbjct: 61 QFETLDAKSKATQLSLQNNLNFRGFPLSLSSSHEDVVVRPIDPNHRTKIGDLYVGLMSNE 120
Query: 121 DQMCVIDTLEDAKIWVMPDRNCVVFHLELEGKFYKMEVHFDDIFEAFGCYFDEQSPAILL 180
D MCVI+T E+ WVMPDR CV FH+E + K YK+EV FDDIFEAFGCYFD QSPAIL
Sbjct: 121 DNMCVIETFENVTFWVMPDRGCVEFHVEFDEKLYKLEVQFDDIFEAFGCYFDPQSPAILF 180
Query: 181 KLKYAPKIYQRISGPNLYTRFTADRYHICKEDLEFIWVRTTDISKSNSIGLSSAFCWEIG 240
KLKYAPKIYQ+ISGPNL TRF+ADRYHICKEDLEF+WVRTTDIS SIGLSSA CWEI
Sbjct: 181 KLKYAPKIYQKISGPNLRTRFSADRYHICKEDLEFLWVRTTDISNKKSIGLSSAICWEIE 240
Query: 241 EGSMGLDFFSTIPFYRKILENFVLEEYDEYSSVSGLVPLVKCENNLKLDYEILFQINSLV 300
EGSMGLDFFSTIPFY+K L +F+LEEYD+YSSVSGLVPLVKC N KLDYEILFQINSLV
Sbjct: 241 EGSMGLDFFSTIPFYKKTLNSFILEEYDDYSSVSGLVPLVKCGNISKLDYEILFQINSLV 300
Query: 301 HTLKISLADVTTELIDFLSTLSIDRAHMVLQKVHKLSSTCYEPLSFIKTQVQALDDAQNS 360
HTLKISLA VTTELIDFL+TLS+D A M LQK+HK SSTCYEPLSFIKTQVQALD+A+++
Sbjct: 301 HTLKISLAAVTTELIDFLTTLSLDTALMALQKLHKFSSTCYEPLSFIKTQVQALDNARSN 360
Query: 361 SLFVRSRLTNDNIMRCHRALVTPTKICLLGPELEASNYIVKNFSAHTSDFMRVTFVDEDW 420
SL RSRL NDNIMRCHRALVTPTKICLLGPELE+SNY+VKNF+A++SDFMRVTFVDEDW
Sbjct: 361 SLSARSRLKNDNIMRCHRALVTPTKICLLGPELESSNYVVKNFAAYSSDFMRVTFVDEDW 420
Query: 421 GKLHPMAVSVSTEQGIFSKPFRTDVYHRILSILREGIVIGDKRFEFLAFSASQLRSNSVW 480
G+LHP+ VS STEQGIFSKPFRTD+YHRILSILREGIVIG+KRFEFLAFSASQLRSNSVW
Sbjct: 421 GRLHPIVVSASTEQGIFSKPFRTDIYHRILSILREGIVIGNKRFEFLAFSASQLRSNSVW 480
Query: 481 MFASNDKVKADDIREWMGSFNKIRSISKCAARMGQLFSAAWQTVVVPVQDVEVIPDIELN 540
MFASNDKVKADDIREWMGSFNKIRS+SKCAARMGQLFSAA QT+VVPVQDVEVIPDI++N
Sbjct: 481 MFASNDKVKADDIREWMGSFNKIRSVSKCAARMGQLFSAARQTIVVPVQDVEVIPDIDIN 540
Query: 541 SDGIDYCFSDGIGKISLSFARQVAQKCGVEHTPSAFQIRYGGYKGVVAVDRNSFRKLSLR 600
+DGIDYCFSDGIGKISLSFARQVAQK GV+HTPSAFQIRYGGYKGV+AVDRNSFRKLSLR
Sbjct: 541 TDGIDYCFSDGIGKISLSFARQVAQKYGVDHTPSAFQIRYGGYKGVIAVDRNSFRKLSLR 600
Query: 601 SSMLKFESKNRMLNVTKCNKSQSCYLNREIVTLLTTLGVEDSSLEALLQEHMRLLANTLT 660
SSMLKFESKNRMLNVTKC KSQ+CYLNREIVTLLTTL V+D LEALLQ+HMRLL + LT
Sbjct: 601 SSMLKFESKNRMLNVTKCCKSQACYLNREIVTLLTTLEVKDDDLEALLQDHMRLLGSMLT 660
Query: 661 SRDAALALLESTDMGESKTLVKMLRHGFEPNSEPYLLMMLRAYLESQLSDLRGRCRLYVP 720
SRDAALA+LESTDMG+SKTL KMLRHG+EPN+EPYLLMMLRAYLESQLSDLRGRCR+Y+P
Sbjct: 661 SRDAALAVLESTDMGDSKTLSKMLRHGYEPNAEPYLLMMLRAYLESQLSDLRGRCRIYIP 720
Query: 721 KGRVLLGCLDETGILNYGQIFVRLTLRKTELENMDPSIFHKLDEKTAILTGTVVVTKNPC 780
KGRVLLGCLDETGILNYGQ+F R+TLRKTELEN+DPSIFHK+DEKTAILTG VVVTKNPC
Sbjct: 721 KGRVLLGCLDETGILNYGQVFARITLRKTELENVDPSIFHKVDEKTAILTGKVVVTKNPC 780
Query: 781 LHPGDVRVLEAVYEVALEEKGLIDCLIFPQKGERPHPNECSGGDLDGDLYFISWDEKLIP 840
LHPGDVRVLEAVYEVALEEKGL+DCLIFPQKGERPHPNECSGGDLDGDLYFISWDE+LIP
Sbjct: 781 LHPGDVRVLEAVYEVALEEKGLVDCLIFPQKGERPHPNECSGGDLDGDLYFISWDERLIP 840
Query: 841 PRTVAPMDYTGCRPRIMDHDVTMEEIQRFFVDYMISDTLGTISTAHLVLADREPEKALSP 900
P+TV PMDY+ RPRIMDHDVT++EIQ+FFVDYMI+DTLGTISTAHLVLADREPEKALSP
Sbjct: 841 PKTVPPMDYSASRPRIMDHDVTLKEIQQFFVDYMINDTLGTISTAHLVLADREPEKALSP 900
Query: 901 KCLRLAELHSMAVDYAKTGAPAEMPNVLKPKEYPDFMERWDRPTYISQGILGKLYRATVS 960
KCLRLA LHSMAVD+AK+GAPAEMP VLKPKEYPDFMERWD+PTYISQG+LGKLYRATV+
Sbjct: 901 KCLRLANLHSMAVDFAKSGAPAEMPRVLKPKEYPDFMERWDKPTYISQGVLGKLYRATVA 960
Query: 961 ATIPSSDFKWSEETARAAYDSDLEVPGFEAFIDTAKSCKEMYMEKMSMLLMFYGANSEDE 1020
+TIP SDF WSEETARAAYD DLEVPGFE FID AKSCKE+Y +KMS+LLMFYGAN+EDE
Sbjct: 961 STIPKSDFSWSEETARAAYDPDLEVPGFETFIDAAKSCKELYRDKMSVLLMFYGANTEDE 1020
Query: 1021 ILTGNLRSKSIYLRKDNRRYRELTDRILISVKSLQKEAKGWFENSCGEEDRQKMASAWYH 1080
ILTGNLRSKS YL++DNRRYRELTDRIL+SVKSLQ EAKGWFENSC +DRQKMASAWY
Sbjct: 1021 ILTGNLRSKSAYLQRDNRRYRELTDRILVSVKSLQNEAKGWFENSCKVQDRQKMASAWYR 1080
Query: 1081 VTYHPDHCHDSDNCLGFPWTVHDVLVTIKSANRKQ 1116
VTYHP HCHDS NCLGFPWTV DVL+TIKS NRKQ
Sbjct: 1081 VTYHPSHCHDSQNCLGFPWTVSDVLLTIKSDNRKQ 1115
BLAST of Spo04141.1 vs. UniProtKB/TrEMBL
Match:
A0A0V0IXZ5_SOLCH (Putative RNA-dependent RNA polymerase 2-like OS=Solanum chacoense PE=4 SV=1)
HSP 1 Score: 1465.3 bits (3792), Expect = 0.000e+0
Identity = 714/1108 (64.44%), Postives = 874/1108 (78.88%), Query Frame = 1
Query: 11 STVRVSNIPTTATAQDIFDFLESKIGKGTIFAIEIFTEKKNWKSKGHGRVQFESLDSKSK 70
+T+RVSNIP +A A+D+FDF +S IGKG++FA +IF+E KNWKS+GHGRVQFE+L K
Sbjct: 9 ATLRVSNIPQSAIAKDLFDFFDSLIGKGSVFACDIFSEHKNWKSRGHGRVQFETLQDKLH 68
Query: 71 AQELALENDLLFKGCPLSLSSSHEDVVVRPIEPSCRGVRGDVYVGLMKEEDQMCVIDTLE 130
L+ + +LLFKG LSL SS +D++ RP+EP CR G ++ GL+ + D M V++T E
Sbjct: 69 CLSLSEQGNLLFKGHQLSLVSSFDDIIARPVEPKCRFQDGILHTGLLVKNDVMQVLETWE 128
Query: 131 DAKIWVMPDRNCVVFHLELEGKFYKMEVHFDDIFEAFGCYFDEQSPAILLKLKYAPKIYQ 190
D K +MP+R C+ F + + Y++EV F D+ EA C + Q A+LLKLK+APK+YQ
Sbjct: 129 DVKTLIMPERKCLEFWVSHAEECYRLEVQFGDVAEATVCSLENQKSALLLKLKHAPKLYQ 188
Query: 191 RISGPNLYTRFTADRYHICKEDLEFIWVRTTDISKSNSIGLSSAFCWEIGEGSMGLDFFS 250
R+SGP + ++F+ADRYHICKED EF+WVRTTD S SIG SS+ CWE +G + D S
Sbjct: 189 RVSGPAVASKFSADRYHICKEDCEFLWVRTTDFSNIKSIGCSSSLCWETEDGWLSSDLLS 248
Query: 251 TIPFYRKILENFVLEEYDEYSSVSGLVPLVKCENNLKLDYEILFQINSLVHTLKISLADV 310
++P K + + L++ + S S VPLV+ ++LKL YEILFQ+NSLV T KISL V
Sbjct: 249 SLPCCNKDVIDLDLDKVGDIYSGSEFVPLVRIPSDLKLPYEILFQLNSLVQTQKISLGAV 308
Query: 311 TTELIDFLSTLSIDRAHMVLQKVHKLSSTCYEPLSFIKTQVQALDDAQNSSLFVR-SRLT 370
+LI+ LS L +D A M+LQK+HKL STC+EPL+FIKT++ L + L SRL
Sbjct: 309 NPDLIEVLSKLELDTAMMILQKMHKLQSTCFEPLTFIKTRLHVLGKNNKNQLSSSYSRLV 368
Query: 371 NDNIMRCHRALVTPTKICLLGPELEASNYIVKNFSAHTSDFMRVTFVDEDWGKLHPMAVS 430
N ++M HR LVTP+KI LGPELE SNYIVKNF+ H SDF+RVTFV+EDWGKL P AVS
Sbjct: 369 NHSMMSVHRVLVTPSKIYCLGPELETSNYIVKNFAEHASDFLRVTFVEEDWGKLFPNAVS 428
Query: 431 VSTEQGIFSKPFRTDVYHRILSILREGIVIGDKRFEFLAFSASQLRSNSVWMFASNDKVK 490
+S EQGIF+KP+RT +YHRILSILREGIVIG KRF FLAFSASQLRSNSVWMFASN+ VK
Sbjct: 429 MSVEQGIFAKPYRTKIYHRILSILREGIVIGTKRFFFLAFSASQLRSNSVWMFASNEYVK 488
Query: 491 ADDIREWMGSFNKIRSISKCAARMGQLFSAAWQTVVVPVQDVEVIPDIELNSDGIDYCFS 550
A+DIREWMG FNKIRSISKCAARMGQLFS + QT+ V +Q VE++PDIE+ SDG+ YCFS
Sbjct: 489 AEDIREWMGCFNKIRSISKCAARMGQLFSTSVQTMEVQLQHVEILPDIEVTSDGVSYCFS 548
Query: 551 DGIGKISLSFARQVAQKCGVEHTPSAFQIRYGGYKGVVAVDRNSFRKLSLRSSMLKFESK 610
DGIGKIS +FARQVAQKCG+ HTPSAFQIRYGGYKGV+AVDRNSFRKLSLR SMLKFESK
Sbjct: 549 DGIGKISQAFARQVAQKCGLNHTPSAFQIRYGGYKGVIAVDRNSFRKLSLRGSMLKFESK 608
Query: 611 NRMLNVTKCNKSQSCYLNREIVTLLTTLGVEDSSLEALLQEHMRLLANTLTSRDAALALL 670
NRMLN+TK + + CYLNREIV LL+TLGVED +LE LL H+RLL LT+ +AAL +L
Sbjct: 609 NRMLNITKWSDAMPCYLNREIVILLSTLGVEDKALEDLLDNHLRLLGKMLTTNEAALDVL 668
Query: 671 ESTDMGE-SKTLVKMLRHGFEPNSEPYLLMMLRAYLESQLSDLRGRCRLYVPKGRVLLGC 730
ES G+ K L++ML G+ PN EPYL MML+++ E+Q+SDLR RCR+++PKGR+L+GC
Sbjct: 669 ESMGGGDVKKILMRMLLQGYAPNREPYLSMMLQSHFENQISDLRSRCRIFIPKGRILVGC 728
Query: 731 LDETGILNYGQIFVRLTLRKTELENMDPSIFHKLDEKTAILTGTVVVTKNPCLHPGDVRV 790
LDETGIL YGQ++VR+T+ K EL+N + F K+DE TA++ G VVVTKNPCLHPGDVRV
Sbjct: 729 LDETGILKYGQVYVRITMTKAELQNGQQNFFQKVDETTAVVRGKVVVTKNPCLHPGDVRV 788
Query: 791 LEAVYEVALEEKGLIDCLIFPQKGERPHPNECSGGDLDGDLYFISWDEKLIPPRTVAPMD 850
LEAVYEV LEEK +DC+IFPQ GERPHPNECSGGDLDGDLYFI WDE LIP +TV PMD
Sbjct: 789 LEAVYEVTLEEKTWVDCIIFPQNGERPHPNECSGGDLDGDLYFICWDESLIPHQTVTPMD 848
Query: 851 YTGCRPRIMDHDVTMEEIQRFFVDYMISDTLGTISTAHLVLADREPEKALSPKCLRLAEL 910
YTG RPRIMDH+VT+EEIQRFFVDYMISDTLG ISTAHLV ADREP+KAL+ KCL+LA L
Sbjct: 849 YTGRRPRIMDHEVTLEEIQRFFVDYMISDTLGAISTAHLVHADREPDKALNSKCLQLATL 908
Query: 911 HSMAVDYAKTGAPAEMPNVLKPKEYPDFMERWDRPTYISQGILGKLYRATVSATI-PSSD 970
HSMAVD+AKTGA AEMP LKP+E+PDFMERWD+P YIS+G+LGKLYR + + I +SD
Sbjct: 909 HSMAVDFAKTGAAAEMPRFLKPREFPDFMERWDKPMYISEGVLGKLYRGVIKSYIRRNSD 968
Query: 971 FKWSEETARAAYDSDLEVPGFEAFIDTAKSCKEMYMEKMSMLLMFYGANSEDEILTGNLR 1030
++ + AYD DL V G+ AFI+TAK+ KEMY++ M+ LL +YGA E EILTGNLR
Sbjct: 969 DLSTDRAIQDAYDHDLLVEGYGAFIETAKTHKEMYLDSMNSLLNYYGAEKEVEILTGNLR 1028
Query: 1031 SKSIYLRKDNRRYRELTDRILISVKSLQKEAKGWFENSCGEEDRQKMASAWYHVTYHPDH 1090
KS+YL++DNRRY EL DRIL+S KSL KE KGWF C E+D QK+ASAWYHVTYHP +
Sbjct: 1029 QKSVYLQRDNRRYFELKDRILVSAKSLHKEVKGWFSGCCTEDDHQKLASAWYHVTYHPSY 1088
Query: 1091 CHDSDNCLGFPWTVHDVLVTIKSANRKQ 1116
CH+S NCLGFPW V D+L+ IKS N ++
Sbjct: 1089 CHESANCLGFPWVVGDILLNIKSHNTRK 1116
BLAST of Spo04141.1 vs. UniProtKB/TrEMBL
Match:
K4BKR6_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)
HSP 1 Score: 1449.9 bits (3752), Expect = 0.000e+0
Identity = 707/1108 (63.81%), Postives = 871/1108 (78.61%), Query Frame = 1
Query: 11 STVRVSNIPTTATAQDIFDFLESKIGKGTIFAIEIFTEKKNWKSKGHGRVQFESLDSKSK 70
+TVRVSNIP +A A+D+ +F +S IGKG++FA +I +E KNWKS+GHGRVQFE+L K
Sbjct: 9 ATVRVSNIPQSAIAKDLSNFFDSLIGKGSVFACDIHSEHKNWKSRGHGRVQFETLQDKLH 68
Query: 71 AQELALENDLLFKGCPLSLSSSHEDVVVRPIEPSCRGVRGDVYVGLMKEEDQMCVIDTLE 130
LA + +LLFKG LSL SS +D++ RP+EP CR G ++ GL+ E+D M V++T E
Sbjct: 69 CLSLAEQGNLLFKGHQLSLVSSFDDIITRPVEPKCRFQAGILHTGLLVEKDVMQVLETWE 128
Query: 131 DAKIWVMPDRNCVVFHLELEGKFYKMEVHFDDIFEAFGCYFDEQSPAILLKLKYAPKIYQ 190
D K +MP+R C+ F + + Y++EV F D+ E C + Q A+LLKLK+APK+YQ
Sbjct: 129 DVKTLIMPERKCLEFWVSHAEECYRLEVQFGDVTEGTLCSVENQKSALLLKLKHAPKLYQ 188
Query: 191 RISGPNLYTRFTADRYHICKEDLEFIWVRTTDISKSNSIGLSSAFCWEIGEGSMGLDFFS 250
R+SGP + ++F+ADRYHICKED EF+W+RTTD S SIG SS+ CWE +G + D FS
Sbjct: 189 RVSGPAVASKFSADRYHICKEDCEFLWIRTTDFSNIKSIGCSSSLCWETEDGWLSSDLFS 248
Query: 251 TIPFYRKILENFVLEEYDEYSSVSGLVPLVKCENNLKLDYEILFQINSLVHTLKISLADV 310
++P + + + L++ + S S VPLV+ ++LKL YEILFQ+NSLV T KISL +
Sbjct: 249 SLPCCNQDVIDLDLDKVGDIYSGSEFVPLVRIPSDLKLPYEILFQLNSLVQTQKISLGAI 308
Query: 311 TTELIDFLSTLSIDRAHMVLQKVHKLSSTCYEPLSFIKTQVQALD-DAQNSSLFVRSRLT 370
LI+ LS L +D A M+LQK+HKL S C++PL FIKT++ L + +N SRL
Sbjct: 309 NPNLIEVLSKLELDTAMMILQKMHKLQSICFDPLLFIKTRLHVLGKNNKNRPSSSYSRLV 368
Query: 371 NDNIMRCHRALVTPTKICLLGPELEASNYIVKNFSAHTSDFMRVTFVDEDWGKLHPMAVS 430
N ++M HR LVTP+KI LGPELE SNYIVKNF++H SDF+RVTFV+EDWGKL P AVS
Sbjct: 369 NHSMMSVHRVLVTPSKIYCLGPELETSNYIVKNFASHASDFLRVTFVEEDWGKLFPNAVS 428
Query: 431 VSTEQGIFSKPFRTDVYHRILSILREGIVIGDKRFEFLAFSASQLRSNSVWMFASNDKVK 490
+S EQGIF+KP+RT +YHRILSILREGIVIG KRF FLAFSASQLRSNSVWMFASN+ VK
Sbjct: 429 MSVEQGIFAKPYRTKIYHRILSILREGIVIGTKRFFFLAFSASQLRSNSVWMFASNEYVK 488
Query: 491 ADDIREWMGSFNKIRSISKCAARMGQLFSAAWQTVVVPVQDVEVIPDIELNSDGIDYCFS 550
A+DIREWMG FNKIRSISKCAARMGQLFS + QT+ V +Q VE++PDIE+ SDG+ YCFS
Sbjct: 489 AEDIREWMGCFNKIRSISKCAARMGQLFSTSVQTMEVKLQHVEILPDIEVTSDGVSYCFS 548
Query: 551 DGIGKISLSFARQVAQKCGVEHTPSAFQIRYGGYKGVVAVDRNSFRKLSLRSSMLKFESK 610
DGIGKIS +FARQVAQKCG+ HTPSAFQIRYGGYKGV+AVDRNSFRKLSLR SMLKFESK
Sbjct: 549 DGIGKISQAFARQVAQKCGLNHTPSAFQIRYGGYKGVIAVDRNSFRKLSLRGSMLKFESK 608
Query: 611 NRMLNVTKCNKSQSCYLNREIVTLLTTLGVEDSSLEALLQEHMRLLANTLTSRDAALALL 670
NRMLN+TK + + CYLNREIV LL+TLGVED + E LL H+ LL LT+ +AAL +L
Sbjct: 609 NRMLNITKWSDAMPCYLNREIVILLSTLGVEDKAFEDLLDNHLCLLGKMLTTNEAALDVL 668
Query: 671 ESTDMGE-SKTLVKMLRHGFEPNSEPYLLMMLRAYLESQLSDLRGRCRLYVPKGRVLLGC 730
ES GE K L++ML G+ PN EPYL MML+++ E+Q+SDLR RCR+++PKGR+L+GC
Sbjct: 669 ESMGGGEVKKILMRMLLQGYAPNQEPYLSMMLQSHFENQISDLRSRCRIFIPKGRILVGC 728
Query: 731 LDETGILNYGQIFVRLTLRKTELENMDPSIFHKLDEKTAILTGTVVVTKNPCLHPGDVRV 790
LDETGIL YGQ++VR+T+ K EL+N + F K+DE TA++ G VVVTKNPCLHPGDVRV
Sbjct: 729 LDETGILKYGQVYVRITMTKAELQNGQQNFFQKVDETTAVVRGKVVVTKNPCLHPGDVRV 788
Query: 791 LEAVYEVALEEKGLIDCLIFPQKGERPHPNECSGGDLDGDLYFISWDEKLIPPRTVAPMD 850
LEAVYEV LEEK +DC+IFPQKGERPHPNECSGGDLDGDLYFI WDE LIP +TV PMD
Sbjct: 789 LEAVYEVTLEEKTWVDCIIFPQKGERPHPNECSGGDLDGDLYFICWDESLIPCQTVTPMD 848
Query: 851 YTGCRPRIMDHDVTMEEIQRFFVDYMISDTLGTISTAHLVLADREPEKALSPKCLRLAEL 910
YTG RPRIMDH+VT+EEIQRFFVDYMISDTLG ISTAHLV ADREP+KAL+ KCL+LA L
Sbjct: 849 YTGRRPRIMDHEVTLEEIQRFFVDYMISDTLGAISTAHLVHADREPDKALNSKCLQLATL 908
Query: 911 HSMAVDYAKTGAPAEMPNVLKPKEYPDFMERWDRPTYISQGILGKLYRATVSATI-PSSD 970
HSMAVD+AKTGA AEMP LKP+E+PDFMERWD+P YIS+G+LGKLYR + + I +SD
Sbjct: 909 HSMAVDFAKTGAAAEMPRFLKPREFPDFMERWDKPMYISEGVLGKLYRGVMKSYIRRNSD 968
Query: 971 FKWSEETARAAYDSDLEVPGFEAFIDTAKSCKEMYMEKMSMLLMFYGANSEDEILTGNLR 1030
++ + AYD DL V G+EAF +TAK+ K MY++ M+ LL +YGA E EILTGNLR
Sbjct: 969 DLSADRAIQDAYDHDLLVEGYEAFTETAKTHKAMYLDSMNSLLNYYGAEKEVEILTGNLR 1028
Query: 1031 SKSIYLRKDNRRYRELTDRILISVKSLQKEAKGWFENSCGEEDRQKMASAWYHVTYHPDH 1090
KS+YL++DNRRY EL DRIL+S KSL KE KGWF + C E+D QK+ASAWYHVTYHP +
Sbjct: 1029 QKSVYLQRDNRRYFELKDRILVSAKSLHKEVKGWFTSCCQEDDHQKLASAWYHVTYHPSY 1088
Query: 1091 CHDSDNCLGFPWTVHDVLVTIKSANRKQ 1116
CH+S NCLGFPW V D+L+ +KS N ++
Sbjct: 1089 CHESANCLGFPWVVGDILLNMKSHNTRK 1116
BLAST of Spo04141.1 vs. UniProtKB/TrEMBL
Match:
Q647I4_NICBE (Putative RNA-dependent RNA polymerase RdRP2 OS=Nicotiana benthamiana PE=2 SV=1)
HSP 1 Score: 1442.6 bits (3733), Expect = 0.000e+0
Identity = 701/1109 (63.21%), Postives = 874/1109 (78.81%), Query Frame = 1
Query: 11 STVRVSNIPTTATAQDIFDFLESKIGKGTIFAIEIFTEKKNWKSKGHGRVQFESLDSKSK 70
+TVRVSNIP TA A+ +FDF ES IGKG++FA +IF+E KNWKS+GHGRVQFE+ SK +
Sbjct: 9 ATVRVSNIPQTAIAKQLFDFFESSIGKGSVFACDIFSEHKNWKSRGHGRVQFETSQSKLQ 68
Query: 71 AQELALENDLLFKGCPLSLSSSHEDVVVRPIEPSCRGVRGDVYVGLMKEEDQMCVIDTLE 130
+ L+ + L+FKG L L+SS +D++ RPIE + R +G ++ G++ E D M V++T E
Sbjct: 69 SLSLSEQGKLVFKGHQLILTSSFDDIIARPIELNYRFQKGILHTGILLENDYMEVLETWE 128
Query: 131 DAKIWVMPDRNCVVFHLE-LEGKFYKMEVHFDDIFEAFGCYFDEQSPAILLKLKYAPKIY 190
+ K +MP+R + F + +G+ Y++EV F DI E C +++ A+LLKLK+APK+Y
Sbjct: 129 NVKTLIMPERKSLEFWVSHAKGECYRLEVQFGDIIETCECSLEDEKTALLLKLKHAPKLY 188
Query: 191 QRISGPNLYTRFTADRYHICKEDLEFIWVRTTDISKSNSIGLSSAFCWEIGEGSMGLDFF 250
QR+SGP + ++F++DRYH+C+ED EF+WVRTTD S SIG SS+ CWEI +G + D
Sbjct: 189 QRVSGPGVASKFSSDRYHVCEEDCEFLWVRTTDFSAMKSIGCSSSPCWEIEDGLLSSDLL 248
Query: 251 STIPFYRKILENFVLEEYDEYSSVSGLVPLVKCENNLKLDYEILFQINSLVHTLKISLAD 310
S +P+ + + VL+E + S S LVPL ++LKL YEILFQ+NSL+HT KISL
Sbjct: 249 SGLPYCNNDVMDLVLDEVGDIYSASELVPLASFPSDLKLPYEILFQLNSLIHTHKISLGA 308
Query: 311 VTTELIDFLSTLSIDRAHMVLQKVHKLSSTCYEPLSFIKTQVQALD-DAQNSSLFVRSRL 370
V T+LI+ LS L +D A M+LQK+HKL STC+EP+ FIKT++ L +++N SRL
Sbjct: 309 VKTDLIEVLSKLELDTAMMILQKMHKLQSTCFEPVPFIKTRLHVLGKNSKNQPSSSYSRL 368
Query: 371 TNDNIMRCHRALVTPTKICLLGPELEASNYIVKNFSAHTSDFMRVTFVDEDWGKLHPMAV 430
N N+M HR LVTP+K+ LGPELE SNYIVKNF+ H SDF+RVTFV+EDWGKL P A+
Sbjct: 369 VNQNMMSVHRVLVTPSKVYCLGPELETSNYIVKNFALHASDFLRVTFVEEDWGKLSPNAI 428
Query: 431 SVSTEQGIFSKPFRTDVYHRILSILREGIVIGDKRFEFLAFSASQLRSNSVWMFASNDKV 490
S+S EQGIF+KP+RT +YHRILSILR+G+VIG KRF FLAFSASQLRSNSVWMFASN+ V
Sbjct: 429 SMSVEQGIFAKPYRTKIYHRILSILRDGLVIGSKRFLFLAFSASQLRSNSVWMFASNEHV 488
Query: 491 KADDIREWMGSFNKIRSISKCAARMGQLFSAAWQTVVVPVQDVEVIPDIELNSDGIDYCF 550
KA+DIREWMG FNKIRS+SKCAARMGQLFS ++QT+ V VE++PDIE+ SDG+ YCF
Sbjct: 489 KAEDIREWMGCFNKIRSVSKCAARMGQLFSTSFQTMEVQSPHVEILPDIEVTSDGVSYCF 548
Query: 551 SDGIGKISLSFARQVAQKCGVEHTPSAFQIRYGGYKGVVAVDRNSFRKLSLRSSMLKFES 610
SDGIGKIS +FA QVAQKCG+ +TPSAFQIRYGGYKGV+AVDRNSFRKLSLR SMLKFES
Sbjct: 549 SDGIGKISQAFASQVAQKCGLSYTPSAFQIRYGGYKGVIAVDRNSFRKLSLRGSMLKFES 608
Query: 611 KNRMLNVTKCNKSQSCYLNREIVTLLTTLGVEDSSLEALLQEHMRLLANTLTSRDAALAL 670
KNRMLN+TK + + CYLNREIV LL+TLGVED E LL H+ LL LT+ +AAL +
Sbjct: 609 KNRMLNITKWSDAMPCYLNREIVILLSTLGVEDKVFEDLLDNHLHLLGKMLTTNEAALDV 668
Query: 671 LESTDMGE-SKTLVKMLRHGFEPNSEPYLLMMLRAYLESQLSDLRGRCRLYVPKGRVLLG 730
LES G+ K L++ML G+ PN EPYL MML+++ E+QLSDLR RCR+++ KGRVL+G
Sbjct: 669 LESIGGGDVKKILMRMLHQGYAPNLEPYLSMMLQSHFENQLSDLRSRCRIFIHKGRVLVG 728
Query: 731 CLDETGILNYGQIFVRLTLRKTELENMDPSIFHKLDEKTAILTGTVVVTKNPCLHPGDVR 790
CLDETGILNYGQ++ R+T+ K EL++ S F K+DE TA++ G VVVTKNPCLHPGDVR
Sbjct: 729 CLDETGILNYGQVYARITMTKAELQSAQQSFFQKVDETTAVVRGNVVVTKNPCLHPGDVR 788
Query: 791 VLEAVYEVALEEKGLIDCLIFPQKGERPHPNECSGGDLDGDLYFISWDEKLIPPRTVAPM 850
VLEAVYEVALEEK +DC+IFPQKGERPHPNECSGGDLDGDLYFISWDE LIP +TV PM
Sbjct: 789 VLEAVYEVALEEKAWVDCIIFPQKGERPHPNECSGGDLDGDLYFISWDENLIPRQTVTPM 848
Query: 851 DYTGCRPRIMDHDVTMEEIQRFFVDYMISDTLGTISTAHLVLADREPEKALSPKCLRLAE 910
DYTG R RIMDH+VT++EIQRFFVDYMISDTLG ISTAHLV ADREP+KAL+PKCL+LA
Sbjct: 849 DYTGRRTRIMDHEVTLQEIQRFFVDYMISDTLGAISTAHLVHADREPDKALNPKCLQLAT 908
Query: 911 LHSMAVDYAKTGAPAEMPNVLKPKEYPDFMERWDRPTYISQGILGKLYRATVSATIPS-S 970
LHSMAVD+AKTGA AEMP LKP+E+PDF+ERWD+P YIS+G+LGKLYRA V++++ S S
Sbjct: 909 LHSMAVDFAKTGAAAEMPRFLKPREFPDFLERWDKPMYISEGVLGKLYRAIVNSSVRSNS 968
Query: 971 DFKWSEETARAAYDSDLEVPGFEAFIDTAKSCKEMYMEKMSMLLMFYGANSEDEILTGNL 1030
D S + AYD L G+EAFI+TAK+ KE Y+++M+ LL +YGA E EILTGNL
Sbjct: 969 DDLGSVRAIQDAYDHALLFDGYEAFIETAKNHKETYLDRMNSLLNYYGAEKEVEILTGNL 1028
Query: 1031 RSKSIYLRKDNRRYRELTDRILISVKSLQKEAKGWFENSCGEEDRQKMASAWYHVTYHPD 1090
R KS+YL++DNRRY EL DRIL+S KSLQKE KGWF C E++ +K+ASAWYHVTYHP
Sbjct: 1029 RQKSVYLQRDNRRYFELKDRILVSAKSLQKEVKGWFTGCCKEDEHKKLASAWYHVTYHPS 1088
Query: 1091 HCHDSDNCLGFPWTVHDVLVTIKSANRKQ 1116
+C S NCLGFPW V D+L+ IK N ++
Sbjct: 1089 YCEGSANCLGFPWVVGDILLDIKLHNTRK 1117
BLAST of Spo04141.1 vs. ExPASy Swiss-Prot
Match:
RDR2_ARATH (RNA-dependent RNA polymerase 2 OS=Arabidopsis thaliana GN=RDR2 PE=1 SV=1)
HSP 1 Score: 1291.2 bits (3340), Expect = 0.000e+0
Identity = 639/1122 (56.95%), Postives = 837/1122 (74.60%), Query Frame = 1
Query: 3 IDRPTVERSTVRVSNIPTTATAQDIFDFLESKIGKGTIFAIEIFTEKKNWKSKGHGRVQF 62
+ T RSTV++SN+P T A ++ FLE +G+ T+FA+EI T + NWK + RVQF
Sbjct: 2 VSETTTNRSTVKISNVPQTIVADELLRFLELHLGEDTVFALEIPTTRDNWKPRDFARVQF 61
Query: 63 ESLDSKSKAQELALENDLLFKGCPLSLSSSHEDVVVRPIEPSCRGVRGDVYVGLMK-EED 122
+L+ KS+AQ L+ ++ LLFK L LS +++D++ RP++P R + VG + +E
Sbjct: 62 TTLEVKSRAQLLSSQSKLLFKTHNLRLSEAYDDIIPRPVDPRKRLDDIVLTVGFPESDEK 121
Query: 123 QMCVIDTLEDAKIWVMPDRNCVVFHLELEGKFYKMEVHFDDIFEAFGCYFD---EQSPAI 182
+ C ++ + + W++ ++ V F + G YK+EV F+DI E C + + A
Sbjct: 122 RFCALEKWDGVRCWILTEKRRVEFWVWESGDCYKIEVRFEDIIETLSCCVNGDASEIDAF 181
Query: 183 LLKLKYAPKIYQRISGPNLYTRFTADRYHICKEDLEFIWVRTTDISKSNSIGLSSAFCWE 242
LLKLKY PK+++R++ ++ T+F +DRY CKED +F+W+RTTD S S SIG S+ FC E
Sbjct: 182 LLKLKYGPKVFKRVT-VHIATKFKSDRYRFCKEDFDFMWIRTTDFSGSKSIGTSTCFCLE 241
Query: 243 IGEGSMGLDFFSTIPFYRKILENFVLEEYDEYSSVSGLVPLVKCEN-NLKLDYEILFQIN 302
+ GS LD FS +P+YR+ + + ++S + +VPL+ L+ YEILFQ+N
Sbjct: 242 VHNGSTMLDIFSGLPYYREDTLSLTYVDGKTFASAAQIVPLLNAAILGLEFPYEILFQLN 301
Query: 303 SLVHTLKISL-ADVTTELIDFLSTLSIDRAHMVLQKVHKLSSTCYEPLSFIKTQVQAL-D 362
+LVH KISL A ELI L +S++ A ++L+K+H+ SS CY+P+ F+KTQ+Q++
Sbjct: 302 ALVHAQKISLFAASDMELIKILRGMSLETALVILKKLHQQSSICYDPVFFVKTQMQSVVK 361
Query: 363 DAQNSSLFVRSRLTNDNIMRCHRALVTPTKICLLGPELEASNYIVKNFSAHTSDFMRVTF 422
++S RLT NIM C RA VTP+KI LLGPELE +NY+VKNF+ H SDFMRVTF
Sbjct: 362 KMKHSPASAYKRLTEQNIMSCQRAYVTPSKIYLLGPELETANYVVKNFAEHVSDFMRVTF 421
Query: 423 VDEDWGKLHPMAVSVSTEQGIFSKPFRTDVYHRILSILREGIVIGDKRFEFLAFSASQLR 482
V+EDW KL A+SV++++G F KP RT++Y+R+LSIL EGI +G KRFEFLAFSASQLR
Sbjct: 422 VEEDWSKLPANALSVNSKEGYFVKPSRTNIYNRVLSILGEGITVGPKRFEFLAFSASQLR 481
Query: 483 SNSVWMFASNDKVKADDIREWMGSFNKIRSISKCAARMGQLFSAAWQTVVVPVQDVEVIP 542
NSVWMFASN+KVKA+DIREWMG F KIRSISKCAARMGQLFSA+ QT++V QDVE IP
Sbjct: 482 GNSVWMFASNEKVKAEDIREWMGCFRKIRSISKCAARMGQLFSASRQTLIVRAQDVEQIP 541
Query: 543 DIELNSDGIDYCFSDGIGKISLSFARQVAQKCGVEHTPSAFQIRYGGYKGVVAVDRNSFR 602
DIE+ +DG DYCFSDGIGKISL+FA+QVAQKCG+ H PSAFQIRYGGYKGV+AVDR+SFR
Sbjct: 542 DIEVTTDGADYCFSDGIGKISLAFAKQVAQKCGLSHVPSAFQIRYGGYKGVIAVDRSSFR 601
Query: 603 KLSLRSSMLKFESKNRMLNVTKCNKSQSCYLNREIVTLLTTLGVEDSSLEALLQEHMRLL 662
KLSLR SMLKF+S NRMLNVT+ +S C+LNREI+ LL+TLG+ED+ EA+ H+ +L
Sbjct: 602 KLSLRDSMLKFDSNNRMLNVTRWTESMPCFLNREIICLLSTLGIEDAMFEAMQAVHLSML 661
Query: 663 ANTLTSRDAALALLESTDMGESKT-LVKMLRHGFEPNSEPYLLMMLRAYLESQLSDLRGR 722
N L RDAAL +L+ SK LVKML G+ P+SEPYL MMLR + ESQLS+L+ R
Sbjct: 662 GNMLEDRDAALNVLQKLSGENSKNLLVKMLLQGYAPSSEPYLSMMLRVHHESQLSELKSR 721
Query: 723 CRLYVPKGRVLLGCLDETGILNYGQIFVRLTLRKTELENMDPSIFHKLDEKTAILTGTVV 782
CR+ VPKGR+L+GC+DE GIL YGQ++VR+TL K EL++ D S F K+DE+T+++ G VV
Sbjct: 722 CRILVPKGRILIGCMDEMGILEYGQVYVRVTLTKAELKSRDQSYFRKIDEETSVVIGKVV 781
Query: 783 VTKNPCLHPGDVRVLEAVYEVALEEKGLIDCLIFPQKGERPHPNECSGGDLDGDLYFISW 842
VTKNPCLHPGD+RVL+A+YEV EEKG +DC+IFPQKGERPHPNECSGGDLDGD +F+SW
Sbjct: 782 VTKNPCLHPGDIRVLDAIYEVHFEEKGYLDCIIFPQKGERPHPNECSGGDLDGDQFFVSW 841
Query: 843 DEKLIPPRTVAPMDYTGCRPRIMDHDVTMEEIQRFFVDYMISDTLGTISTAHLVLADREP 902
DEK+IP PMDY G RPR+MDHDVT+EEI +FFVDYMISDTLG ISTAHLV ADR+P
Sbjct: 842 DEKIIPSEMDPPMDYAGSRPRLMDHDVTLEEIHKFFVDYMISDTLGVISTAHLVHADRDP 901
Query: 903 EKALSPKCLRLAELHSMAVDYAKTGAPAEMPNVLKPKEYPDFMERWDRPTYISQGILGKL 962
EKA S KCL LA LHS AVD+AKTGAPAEMP LKP+E+PDF+ER+++PTYIS+ + GKL
Sbjct: 902 EKARSQKCLELANLHSRAVDFAKTGAPAEMPYALKPREFPDFLERFEKPTYISESVFGKL 961
Query: 963 YRATVSATIPSSDFKWSEETARAAYDSDLEVPGFEAFIDTAKSCKEMYMEKMSMLLMFYG 1022
YRA S+ SE+T AYD LE GFE+FI+TAK+ ++MY EK++ L+++YG
Sbjct: 962 YRAVKSSLAQRKPEAESEDT--VAYDVTLEEAGFESFIETAKAHRDMYGEKLTSLMIYYG 1021
Query: 1023 ANSEDEILTGNLRSKSIYLRKDNRRYRELTDRILISVKSLQKEAKGWFENSC-GEEDRQK 1082
A +E+EILTG L++K +YL +DNRRY ++ DRI +SVK L KEA GWFE SC E+ ++K
Sbjct: 1022 AANEEEILTGILKTKEMYLARDNRRYGDMKDRITLSVKDLHKEAMGWFEKSCEDEQQKKK 1081
Query: 1083 MASAWYHVTYHPDHCHDSDNCLGFPWTVHDVLVTIKSANRKQ 1116
+ASAWY+VTY+P+H + L FPW V DVL+ IK+ N ++
Sbjct: 1082 LASAWYYVTYNPNHRDEKLTFLSFPWIVGDVLLDIKAENAQR 1120
BLAST of Spo04141.1 vs. ExPASy Swiss-Prot
Match:
RDR2_ORYSJ (Probable RNA-dependent RNA polymerase 2 OS=Oryza sativa subsp. japonica GN=RDR2 PE=2 SV=1)
HSP 1 Score: 1108.2 bits (2865), Expect = 0.000e+0
Identity = 567/1111 (51.04%), Postives = 754/1111 (67.87%), Query Frame = 1
Query: 11 STVRVSNIPTTATAQDIFDFLESKIG-KGTIFAIEIFTEKKNWKSKGHGRVQFESLDSKS 70
+++RVSNIP +A A ++ F +S + G FA EI + W S+GHG VQF S + +
Sbjct: 10 ASLRVSNIPPSAVAAELLAFFDSAVAVAGGAFACEIAAAHRGWLSRGHGTVQFGSAAAAA 69
Query: 71 KAQELALENDL-LFKGCPLSLSSSHEDVVVRPIEPSCRGVRGDVYVGLMKEEDQMCVIDT 130
A LA L F G LS+S S D++ R + S R + VG E D
Sbjct: 70 AAAGLASSGRLPRFLGALLSVSPSPVDLLPRASDLSLRAAGAGLVVGDRVAERVFEAADA 129
Query: 131 LEDAKIWVMPDRNCVVFHLELEGKFYKMEVHFDDIFEAFGCYFDEQSPAILLKLKYAPKI 190
+ + V+P + V +LE + + YK+EV F+D+ + GC D AILL+L YAP+I
Sbjct: 130 WDGVRAEVIPGKRRVDLYLEHDSQRYKLEVLFEDMKDCLGCTLDGMG-AILLQLNYAPRI 189
Query: 191 YQRISGPNLYTRFTADRYHICKEDLEFIWVRTTDISKSNSIGLSSAFCWEIGEGSMGLDF 250
+ ISGP + +RF DR+H CKED +F WVR D + + S G S ++G+ ++ D
Sbjct: 190 HTAISGPAVNSRFMDDRFHACKEDAKFSWVRALDFTPNYSFGRCSTLVLKLGKSALVSDI 249
Query: 251 FSTIPFYRKILENFVLEEYDEYSSVSGLVPLVKCENNLKLDYEILFQINSLVHTLKISLA 310
++PF + E + D + S +VPLV C + + YE+LF++NSL+H KI
Sbjct: 250 LKSLPFSGNLGE-LTMNSMDGVGASSNVVPLVHCPRDYSVPYEVLFRLNSLMHMGKIVAK 309
Query: 311 DVTTELIDFLSTLSIDRAHMVLQKVHKLSSTCYEPLSFIKTQVQALDDAQNSSLFVRSRL 370
V +L L L +D + + +K+HKL STCY PL FI+ + ++ + N L
Sbjct: 310 HVNADLFKALQELPVDVSRRIFEKMHKLESTCYGPLQFIQQEAYSMKRSHNVLLSNEGEG 369
Query: 371 TNDN-IMRCHRALVTPTKICLLGPELEASNYIVKNFSAHTSDFMRVTFVDEDWGKLHPMA 430
+ +M+C+R +TP+KI GPE E +NY+VK+ SA+ SDF+RVTFVDEDW KL A
Sbjct: 370 EGERKLMKCYRVNITPSKIFCFGPEEEVTNYVVKHHSAYASDFVRVTFVDEDWSKLSSNA 429
Query: 431 VSVSTEQGIFSKPFRTDVYHRILSILREGIVIGDKRFEFLAFSASQLRSNSVWMFASNDK 490
+S EQG FSKPF+T +Y+RILSIL++G IG K FEFLAFSASQLR NSVWMFASN
Sbjct: 430 ISARIEQGFFSKPFKTGLYYRILSILKKGFSIGPKNFEFLAFSASQLRGNSVWMFASNAS 489
Query: 491 VKADDIREWMGSFNKIRSISKCAARMGQLFSAAWQTVVVPVQDVEVIPDIELNSDGIDYC 550
+ A IR WMG F IRS+SKCAARMGQLFS++ QT V DVEVIPDIE+ +DG Y
Sbjct: 490 LNAGGIRRWMGHFENIRSVSKCAARMGQLFSSSRQTFEVLRWDVEVIPDIEITTDGSKYI 549
Query: 551 FSDGIGKISLSFARQVAQKCGVEHT--PSAFQIRYGGYKGVVAVDRNSFRKLSLRSSMLK 610
FSDGIGKISL FA++VA G++ T PSAFQIRYGGYKGV+A+D S LSLR SM K
Sbjct: 550 FSDGIGKISLRFAKRVAHHVGLDPTNLPSAFQIRYGGYKGVIAIDPMSSIDLSLRPSMKK 609
Query: 611 FESKNRMLNVTKCNKSQSCYLNREIVTLLTTLGVEDSSLEALLQEHMRLLANTLTSRDAA 670
FES++RMLN+T +KSQ CY+NREI++LL+TLG+ D A+ Q+ MR LT+++ A
Sbjct: 610 FESESRMLNITSWSKSQPCYVNREIISLLSTLGIRDEIFVAMQQDEMRETEEMLTNKEVA 669
Query: 671 LALLESTDMGESKTLVKMLRHGFEPNSEPYLLMMLRAYLESQLSDLRGRCRLYVPKGRVL 730
L++L E+KT VKML G+EP+SEPYL M+L+A+ E++L+D+R RC+++VPKGRVL
Sbjct: 670 LSVLGKLGGSETKTAVKMLLQGYEPSSEPYLSMILKAHQENRLTDIRTRCKIHVPKGRVL 729
Query: 731 LGCLDETGILNYGQIFVRLTLRKTELENMDPSIFHKLDEKTAILTGTVVVTKNPCLHPGD 790
+GCLDETG+L YGQ+++R+T E ++ + S F+ D KTA + G V +TKNPCLHPGD
Sbjct: 730 IGCLDETGVLEYGQVYIRITKNSKEQKDSNQSYFYNDDGKTATVVGKVAITKNPCLHPGD 789
Query: 791 VRVLEAVYEVALEEKGLIDCLIFPQKGERPHPNECSGGDLDGDLYFISWDEKLIPPRTVA 850
+RVLEA+Y+ L G++DCL+FPQ+GERPHPNECSGGDLDGDLYFI+WD+KLIP +
Sbjct: 790 IRVLEAIYDPDLV--GMVDCLVFPQRGERPHPNECSGGDLDGDLYFITWDDKLIPEKVDT 849
Query: 851 PMDYTGCRPRIMDHDVTMEEIQRFFVDYMISDTLGTISTAHLVLADREPEKALSPKCLRL 910
PMDYT RPRIMDH VT+EEIQ+ FVDYMI+D+LG ISTAHL+ ADR P KA SP+CL+L
Sbjct: 850 PMDYTATRPRIMDHVVTLEEIQKHFVDYMINDSLGAISTAHLIHADRSPLKARSPECLQL 909
Query: 911 AELHSMAVDYAKTGAPAEMPNVLKPKEYPDFMERWDRPTYISQGILGKLYRATVSATIPS 970
A LHSMAVD+AKTGAPAEMP L+P+EYPDFMERW++P YIS G+LGKLYR+ + S
Sbjct: 910 ATLHSMAVDFAKTGAPAEMPRTLRPREYPDFMERWEKPMYISNGVLGKLYRSAMGHMEKS 969
Query: 971 SD---FKWSEETARAAYDSDLEVPGFEAFIDTAKSCKEMYMEKMSMLLMFYGANSEDEIL 1030
D S YD DLEVPG + F+ A+ E+Y EK++ L+ +Y A EDEIL
Sbjct: 970 GDSGALSSSSAQPSPTYDPDLEVPGSDEFLQAAEEYYELYEEKLTTLMNYYRAELEDEIL 1029
Query: 1031 TGNLRSKSIYLRKDNRRYRELTDRILISVKSLQKEAKGWFENSCGEEDRQKMASAWYHVT 1090
TGN+R+K +YL++DN+RY E+ DRI+ +V +L +EA+GW +S EED +MASAWY VT
Sbjct: 1030 TGNIRNKMLYLKRDNKRYFEMKDRIVAAVDALHREARGWLLSSRKEEDASRMASAWYRVT 1089
Query: 1091 YHPDHCHDSDNCLGFPWTVHDVLVTIKSANR 1114
YHPD FPW D L+ IK++++
Sbjct: 1090 YHPDR-RRGKRFWSFPWIACDNLLAIKASSQ 1115
BLAST of Spo04141.1 vs. ExPASy Swiss-Prot
Match:
RDR1_ARATH (RNA-dependent RNA polymerase 1 OS=Arabidopsis thaliana GN=RDR1 PE=2 SV=1)
HSP 1 Score: 750.7 bits (1937), Expect = 2.200e-215
Identity = 454/1132 (40.11%), Postives = 664/1132 (58.66%), Query Frame = 1
Query: 12 TVRVSNIPTTATAQDIFDFLESKIGKGTIFAIEIFTEKKNWKSKGHGRVQFESLDSKSKA 71
T++V P +A+++ FLE G GT++AI++ KK + + VQF S + ++
Sbjct: 4 TIQVFGFPNGVSAEEVKKFLERLTGSGTVYAIKVRQPKKGGP-RVYAIVQFTS-ERHTRL 63
Query: 72 QELALENDLLFKGCPLSLSSSHEDVVVRPIEPSCRGVRG-DVYVGLMKEEDQMCVIDTLE 131
A L + L +D+V +P S + G ++ G C + T +
Sbjct: 64 IITAAAERLYYGRSYLKAFEVEQDIVPKP-RASLHTISGLKMFFG--------CQVSTKK 123
Query: 132 DAKIWVMPDRNCVVFHLELEG---------KFYKMEVHFDDIFEAFGCYFDEQSPA---- 191
+W D CV F + + K Y++E+ +++I++ D SP
Sbjct: 124 FLTLWSAQDV-CVSFGIGMRKLHFSFSWYQKDYRLELSYENIWQ-----IDLHSPQGRSS 183
Query: 192 --ILLKLKYAPKIYQRISGPNLYTRFTADRYHICKEDLEFIWVRTTDISKSNSIGLSSAF 251
+++++ APKI+++ P D Y ++ W+RTTD + S+ IG S+AF
Sbjct: 184 KFLVIQVIGAPKIFEKEDQPINLLFGIMDFYSDGSDEQ---WIRTTDFTSSSCIGQSTAF 243
Query: 252 CWEIGEGSMGLDFFSTIPFYRKI-LENFVLEEYDEYSS-VSGLVPLVKCENNLKLDYEIL 311
C E+ DF Y + +F++E YSS + LVP+V L +EIL
Sbjct: 244 CLELPVHLNVPDFRENFANYAEHRASSFLIESGSSYSSNANTLVPVVDPPPGFSLPFEIL 303
Query: 312 FQINSLVHTLKISLADVTTELIDFLSTLSIDRAHM--VLQKVHKLSSTCYEPLSFIKTQV 371
F++N+LV +S + + L+ DRA + L+K+ L CYEP +++ +
Sbjct: 304 FKLNTLVQNACLSGPALDLDFYRLLNQKKYDRALIDHCLEKLFHLGECCYEPAHWLRDEY 363
Query: 372 QALDDAQNSSLFVRSRLTNDNIMRCHRALVTPTKICLLGPELEASNYIVKNFSAHTSDFM 431
+ L L +D ++ +R VTP ++ GPE+ SN +++++S + ++F+
Sbjct: 364 KKWISKGKLPLSPTISL-DDGLVYMYRVQVTPARVYFSGPEVNVSNRVLRHYSKYINNFL 423
Query: 432 RVTFVDEDWGKLHPMAVSVSTEQGIFSKPFRTDVYHRILSILREGIVIGDKRFEFLAFSA 491
RV+FVDED K+ M +S + S RT +Y RI S+LR+GIVIGDK+FEFLAFS+
Sbjct: 424 RVSFVDEDLEKVRSMDLSPRS-----STQRRTKLYDRIYSVLRDGIVIGDKKFEFLAFSS 483
Query: 492 SQLRSNSVWMFASNDKVKADDIREWMGSFNKIRSISKCAARMGQLFSAAWQTVVVPVQDV 551
SQLR NS WMFA D++ A IR WMG F+ IR+++K AAR+GQ FS++ +T+ V ++
Sbjct: 484 SQLRENSAWMFAPIDRITAAHIRAWMGDFDHIRNVAKYAARLGQSFSSSRETLNVRSDEI 543
Query: 552 EVIPDIELNSDGIDYCFSDGIGKISLSFARQVAQKCGV-EHTPSAFQIRYGGYKGVVAVD 611
EVIPD+E+ S G Y FSDGIGKIS FAR+VA+KCG+ E +PSAFQIRYGGYKGVVAVD
Sbjct: 544 EVIPDVEIISLGTRYVFSDGIGKISAEFARKVARKCGLTEFSPSAFQIRYGGYKGVVAVD 603
Query: 612 RNSFRKLSLRSSMLKFESKNRMLNVTKCNKSQSCYLNREIVTLLTTLGVEDSSLEALLQE 671
NS +KLSLR SM KFES+N L+V +K Q CY+NR+++TLL+TLGV DS E +E
Sbjct: 604 PNSSKKLSLRKSMSKFESENTKLDVLAWSKYQPCYMNRQLITLLSTLGVTDSVFEKKQRE 663
Query: 672 HMRLLANTLTSRDAALALLESTDMGESKTLVK-MLRHGFEPNSEPYLLMMLRAYLESQLS 731
+ L LT A L GE+ ++K ++ G++P++EP+L MML+ + S+L
Sbjct: 664 VVDRLDAILTHPLEAHEALGLMAPGENTNILKALILCGYKPDAEPFLSMMLQNFRASKLL 723
Query: 732 DLRGRCRLYVPKGRVLLGCLDETGILNYGQIFVRLTLRKTELENMDPSIFHKLDEKTAIL 791
+LR + R+++ GR ++GCLDET L YGQ+ V+ + + M P + I+
Sbjct: 724 ELRTKTRIFISGGRSMMGCLDETRTLEYGQVVVQYS------DPMRPG-------RRFII 783
Query: 792 TGTVVVTKNPCLHPGDVRVLEAVYEVALEEKGLIDCLIFPQKGERPHPNECSGGDLDGDL 851
TG VVV KNPCLHPGDVRVL+AV AL ++DC++FPQKG RPHPNECSG DLDGD+
Sbjct: 784 TGPVVVAKNPCLHPGDVRVLQAVNVPALNH--MVDCVVFPQKGLRPHPNECSGSDLDGDI 843
Query: 852 YFISWDEKLIPPRTVAPMDYTGCRPRIMDHDVTMEEIQRFFVDYMISDTLGTISTAHLVL 911
YF+ WD++L+PPRT PMDYT +I+DHDVT+EE++ +F +Y+++D+LG I+ AH
Sbjct: 844 YFVCWDQELVPPRTSEPMDYTPEPTQILDHDVTIEEVEEYFANYIVNDSLGIIANAHTAF 903
Query: 912 ADREPEKALSPKCLRLAELHSMAVDYAKTGAPAEMPNVLKPKEYPDFMERWDRPTYISQG 971
AD+EP KA S C+ LA+ S AVD+ KTG A +P L KEYPDFME+ D+PTY S+
Sbjct: 904 ADKEPLKAFSDPCIELAKKFSTAVDFPKTGVAAVIPQHLYVKEYPDFMEKPDKPTYESKN 963
Query: 972 ILGKLYRATVSATIPSSDFK-WSEETARAAYDSDLEVPGFEAFIDTAKSCKEMYMEKMSM 1031
++GKL+R P K ++ + A +YD D+EV GFE ++D A K Y K+
Sbjct: 964 VIGKLFREVKERAPPLISIKSFTLDVASKSYDKDMEVDGFEEYVDEAFYQKANYDFKLGN 1023
Query: 1032 LLMFYGANSEDEILTGNL--RSKSIYLRKDNRRYRELTDRILISVKSLQKEAKGWFENSC 1091
L+ +YG +E EIL+G + SKS R+D + I +V++L+KE F S
Sbjct: 1024 LMDYYGIKTEAEILSGGIMRMSKSFTKRRD-------AESIGRAVRALRKETLSLFNASE 1083
Query: 1092 GEEDRQKMASAWYHVTYHPDHCH------DSDNCLGFPWTVHDVLVTIKSAN 1113
EE+ ASAWYHVTYH + + D+ L F W V+D LV IK N
Sbjct: 1084 EEENESAKASAWYHVTYHSSYWGLYNEGLNRDHFLSFAWCVYDKLVRIKKTN 1087
BLAST of Spo04141.1 vs. ExPASy Swiss-Prot
Match:
RDR1_ORYSJ (Probable RNA-dependent RNA polymerase 1 OS=Oryza sativa subsp. japonica GN=RDR1 PE=2 SV=2)
HSP 1 Score: 641.3 bits (1653), Expect = 1.900e-182
Identity = 341/738 (46.21%), Postives = 471/738 (63.82%), Query Frame = 1
Query: 390 GPELEASNYIVKNFSAHTSDFMRVTFVDEDWGKLHPMAVSVSTEQGIFSKPFRTDVYHRI 449
GPE+ SN +V+NFS+ +F+R++FVDED KL +S + G + RT +Y R+
Sbjct: 13 GPEINVSNRVVRNFSSDIENFLRISFVDEDCEKLRATDLSPRSASGHDAN--RTALYKRV 72
Query: 450 LSILREGIVIGDKRFEFLAFSASQLRSNSVWMFASNDKVKADDIREWMGSFNKIRSISKC 509
LS+L +GI IG K FEFLAFS+SQLR NS WMFAS + A DIR WMG F IR+++K
Sbjct: 73 LSVLSDGITIGGKNFEFLAFSSSQLRDNSAWMFASRQGLAASDIRTWMGDFRNIRNVAKY 132
Query: 510 AARMGQLFSAAWQTVVVPVQDVEVIPDIELNSDGIDYCFSDGIGKISLSFARQVAQKCGV 569
AAR+GQ FS++ +T+ V +VE I DI+ +G + FSDGIGKIS +FA +VA KC +
Sbjct: 133 AARLGQSFSSSTETLKVQKYEVEEISDIK---NGTQHVFSDGIGKISSAFANEVAMKCNL 192
Query: 570 EH-TPSAFQIRYGGYKGVVAVDRNSFRKLSLRSSMLKFESKNRMLNVTKCNKSQSCYLNR 629
+ PSAFQIRYGGYKGVVAVD S KLSLR SMLKF+S N ++V +K Q +LNR
Sbjct: 193 KRFAPSAFQIRYGGYKGVVAVDPTSRWKLSLRKSMLKFQSDNITVDVLAYSKYQPGFLNR 252
Query: 630 EIVTLLTTLGVEDSSLEALLQEHMRLLANTLTSRDAALALLESTDMGESKTLVK-MLRHG 689
+++TLL+TLGV DS E +E + L +T AA+ +E MGE VK +L G
Sbjct: 253 QLITLLSTLGVRDSVFEQKQEEAVNQLNKMVTDPQAAIEAIELMPMGEITNAVKELLLCG 312
Query: 690 FEPNSEPYLLMMLRAYLESQLSDLRGRCRLYVPKGRVLLGCLDETGILNYGQIFVRLTLR 749
++P+ EPYL M+L+ + S+L +L+ + R+ +PKGR ++GCLDET L YGQ+F+R T
Sbjct: 313 YQPDDEPYLSMLLQTFRASKLLELKTKSRILIPKGRAMMGCLDETRTLKYGQVFIRATSG 372
Query: 750 KTELENMDPSIFHKLDEKTAILTGTVVVTKNPCLHPGDVRVLEAVYEVALEEKGLIDCLI 809
D +TG VV+ KNPCLHPGD+R+L AV L + +C++
Sbjct: 373 VN-------------DNDRFTVTGKVVIAKNPCLHPGDIRILHAVDVPVLHH--MFNCVV 432
Query: 810 FPQKGERPHPNECSGGDLDGDLYFISWDEKLIPPRTVAPMDYTGCRPRIMDHDVTMEEIQ 869
FPQ+G RPHPNECSG DLDGD+YF+SWD LIPPR V PMDYT +DHDVT+EE++
Sbjct: 433 FPQQGPRPHPNECSGSDLDGDIYFVSWDPSLIPPRMVTPMDYTPAPTETLDHDVTIEEVE 492
Query: 870 RFFVDYMISDTLGTISTAHLVLADREPEKALSPKCLRLAELHSMAVDYAKTGAPAEMPNV 929
+F +Y+++++LG I+ AH+V AD+E KA S C+ LA+L S+AVD+ KTG PA +P
Sbjct: 493 EYFTNYIVNESLGMIANAHVVFADKEDLKAESSPCIELAKLFSIAVDFPKTGVPALIPPE 552
Query: 930 LKPKEYPDFMERWDRPTYISQGILGKLYRATVSATIPSSDFKWSEETARAAYDSDLEVPG 989
L KEYPDFME+ D+ TY S+G++GKLYR T F + E AR +YD+D+ V G
Sbjct: 553 LHVKEYPDFMEKLDKVTYESKGVIGKLYREIKKHTPHIKHF--TREVARRSYDTDMIVDG 612
Query: 990 FEAFIDTAKSCKEMYMEKMSMLLMFYGANSEDEILTGNLRSKSIYLRKDNRRYRELTDRI 1049
+E +I A + K+ Y K+ L+ YG SE EI++G I N + D I
Sbjct: 613 YEDYITEAMALKDEYDFKLGNLMDHYGIKSEAEIISG-----CILKMAKNFTKKSDADAI 672
Query: 1050 LISVKSLQKEAKGWF------ENSCGEEDRQKMASAWYHVTYHPD------HCHDSDNCL 1109
++V+SL+KEA+ F +N G + + ASAWYHVTYHP+ ++ + +
Sbjct: 673 RLAVRSLRKEARSRFSEMSLDDNGHGHDASEAKASAWYHVTYHPEFWGCYNEGYERPHFI 723
Query: 1110 GFPWTVHDVLVTIKSANR 1114
FPW +++ L+ IK +
Sbjct: 733 SFPWCIYEKLLRIKQRRK 723
BLAST of Spo04141.1 vs. ExPASy Swiss-Prot
Match:
SHL2_ORYSJ (Probable RNA-dependent RNA polymerase SHL2 OS=Oryza sativa subsp. japonica GN=SHL2 PE=2 SV=1)
HSP 1 Score: 535.0 bits (1377), Expect = 1.900e-150
Identity = 332/858 (38.69%), Postives = 484/858 (56.41%), Query Frame = 1
Query: 288 LDYEILFQINSLVHTLKISLADVTTELIDFLSTLSIDRAHMVLQKVHKLSSTCYEPLSFI 347
L + +LF +N+LVH I+ +T E F S L ++ + + +
Sbjct: 352 LKFPLLFMVNALVHKGIINQHQLTPE---FFSLLGRSEENVNVAALRDFWGDKFPVFDAC 411
Query: 348 KTQVQALDDAQNSSLFVRSRLTNDNIMRCHRALVTPTKICLLGPELEASNYIVKNFSAHT 407
+AL+ + + S++ +D+ R ++TPT+ L PE+E SN +++++
Sbjct: 412 GRLKKALNRVARNPKLLCSKVGDDHA-EVRRLVITPTRAYCLPPEVERSNRVLRHYHEVA 471
Query: 408 SDFMRVTFVDEDWGKLHPMAVSVSTE---QGIFSKPF--RTDVYHRILSILREGIVIGDK 467
F+RVTF+DE L+ ++ T + + S F +T VY R+ +L EG + +
Sbjct: 472 DRFLRVTFMDEGMQVLNNNVLNSFTAPIVKDLMSNFFQQKTTVYKRVRMLLTEGFHMCGR 531
Query: 468 RFEFLAFSASQLRSNSVWMFASNDKVKADDIREWMGSFNKIRSISKCAARMGQLFSAAWQ 527
++ FLAFS++QLR S W FA + K + IR+WMG F ++++K AARMGQ FS+ +
Sbjct: 532 KYSFLAFSSNQLRDKSAWFFAEDRKTTVEAIRKWMGRFTS-KNVAKHAARMGQCFSSTYA 591
Query: 528 TVVVPVQDV-EVIPDIELNSDGIDYCFSDGIGKISLSFARQVAQKCGV-EHTPSAFQIRY 587
TV + +V E D+ N +Y FSDGIGKI+ A +VA++ + ++ PSA+QIR+
Sbjct: 592 TVTMRPDEVDESFDDVVHN----EYIFSDGIGKITPDLALEVAERLQLTDNPPSAYQIRF 651
Query: 588 GGYKGVVAV--DRNSFRKLSLRSSMLKFESKNRMLNVTKCNKSQSCYLNREIVTLLTTLG 647
G+KGV+AV +L LR SM KFES + +L V K Q +LNR+I+ LL++L
Sbjct: 652 AGFKGVIAVWQGHGDGTRLFLRPSMRKFESNHLVLEVVSWTKFQPGFLNRQIIILLSSLN 711
Query: 648 VEDSSLEALLQEHMRLLANTLTSRDAALALLESTDMGESKTLVKMLRHGFEPNSEPYLLM 707
V DS + + + L N L+ RD A +L ++ + T ML GFEP +EP+L
Sbjct: 712 VPDSIFWQMQETMLSNLNNILSDRDVAFEVLTTSCADDGNTAALMLSAGFEPRTEPHLKA 771
Query: 708 MLRAYLESQLSDLRGRCRLYVPKGRVLLGCLDETGILNYGQIFVRLTLRKTELENM-DPS 767
ML A +QL DL + R++VPKGR L+GCLDE G+L GQ F+R T+ + S
Sbjct: 772 MLLAIRSAQLQDLLEKARIFVPKGRWLMGCLDELGVLEQGQCFIRATVPSLNSYFVKHGS 831
Query: 768 IFHKLDEKTAILTGTVVVTKNPCLHPGDVRVLEAVYEVALEEKGLIDCLIFPQKGERPHP 827
F D+ T ++ GTVV+ KNPCLHPGDVR+LEAV L L+DCL+FPQKGERPH
Sbjct: 832 RFSSTDKNTEVILGTVVIAKNPCLHPGDVRILEAVDVPELHH--LVDCLVFPQKGERPHA 891
Query: 828 NECSGGDLDGDLYFISWDEKLIPP--RTVAPMDYTGCRPRIMDHDVTMEEIQRFFVDYMI 887
NE SG DLDGDLYF++WDEKLIPP ++ PMDY+ + + V+ +I FF+ MI
Sbjct: 892 NEASGSDLDGDLYFVTWDEKLIPPGKKSWNPMDYSPPEAKQLPRQVSQHDIIDFFLKNMI 951
Query: 888 SDTLGTISTAHLVLADREPEKALSPKCLRLAELHSMAVDYAKTGAPAEMPNVLKPKEYPD 947
S+ LG I AH+V AD A+ KC+ LAEL + AVD+ KTG A MP LKPK YPD
Sbjct: 952 SENLGRICNAHVVHADLSEYGAMDEKCIHLAELAATAVDFPKTGKLAIMPPHLKPKVYPD 1011
Query: 948 FMERWDRPTYISQGILGKLYRATVSATIPSSDFKWSEETAR---AAYDSDLEVPGFEAFI 1007
FM + D +Y S+ ILG+LYR+ A S+ S+E YD DLEVPG F+
Sbjct: 1012 FMGKEDGQSYKSEKILGRLYRSIQEA---SNGDVVSQEVCTPNDLPYDIDLEVPGASDFL 1071
Query: 1008 DTAKSCKEMYMEKMSMLLMFYGANSEDEILTGNLRSKSIYLRKDNRRYRELTDRILISVK 1067
+A CK Y ++S LL Y +E E++TG++ + ++ +++ ++ DR+ +
Sbjct: 1072 ASAWQCKCSYDAQLSALLSQYRVRTEAELVTGHI---TFLVKNSSKKQGDIKDRLKTAYS 1131
Query: 1068 SLQKEAKGWFEN------SCGEEDR----QKMASAWYHVTYHPDHCHDSDNCLG------ 1110
+L+KE K FE+ G++++ + ASAWY VTYHP S LG
Sbjct: 1132 ALRKEFKSTFESIASDQCEIGDDEKNLLYEMKASAWYQVTYHPKWVEKSRGILGPDGEEI 1191
BLAST of Spo04141.1 vs. TAIR (Arabidopsis)
Match:
AT4G11130.1 (RNA-dependent RNA polymerase 2)
HSP 1 Score: 1291.2 bits (3340), Expect = 0.000e+0
Identity = 639/1122 (56.95%), Postives = 837/1122 (74.60%), Query Frame = 1
Query: 3 IDRPTVERSTVRVSNIPTTATAQDIFDFLESKIGKGTIFAIEIFTEKKNWKSKGHGRVQF 62
+ T RSTV++SN+P T A ++ FLE +G+ T+FA+EI T + NWK + RVQF
Sbjct: 2 VSETTTNRSTVKISNVPQTIVADELLRFLELHLGEDTVFALEIPTTRDNWKPRDFARVQF 61
Query: 63 ESLDSKSKAQELALENDLLFKGCPLSLSSSHEDVVVRPIEPSCRGVRGDVYVGLMK-EED 122
+L+ KS+AQ L+ ++ LLFK L LS +++D++ RP++P R + VG + +E
Sbjct: 62 TTLEVKSRAQLLSSQSKLLFKTHNLRLSEAYDDIIPRPVDPRKRLDDIVLTVGFPESDEK 121
Query: 123 QMCVIDTLEDAKIWVMPDRNCVVFHLELEGKFYKMEVHFDDIFEAFGCYFD---EQSPAI 182
+ C ++ + + W++ ++ V F + G YK+EV F+DI E C + + A
Sbjct: 122 RFCALEKWDGVRCWILTEKRRVEFWVWESGDCYKIEVRFEDIIETLSCCVNGDASEIDAF 181
Query: 183 LLKLKYAPKIYQRISGPNLYTRFTADRYHICKEDLEFIWVRTTDISKSNSIGLSSAFCWE 242
LLKLKY PK+++R++ ++ T+F +DRY CKED +F+W+RTTD S S SIG S+ FC E
Sbjct: 182 LLKLKYGPKVFKRVT-VHIATKFKSDRYRFCKEDFDFMWIRTTDFSGSKSIGTSTCFCLE 241
Query: 243 IGEGSMGLDFFSTIPFYRKILENFVLEEYDEYSSVSGLVPLVKCEN-NLKLDYEILFQIN 302
+ GS LD FS +P+YR+ + + ++S + +VPL+ L+ YEILFQ+N
Sbjct: 242 VHNGSTMLDIFSGLPYYREDTLSLTYVDGKTFASAAQIVPLLNAAILGLEFPYEILFQLN 301
Query: 303 SLVHTLKISL-ADVTTELIDFLSTLSIDRAHMVLQKVHKLSSTCYEPLSFIKTQVQAL-D 362
+LVH KISL A ELI L +S++ A ++L+K+H+ SS CY+P+ F+KTQ+Q++
Sbjct: 302 ALVHAQKISLFAASDMELIKILRGMSLETALVILKKLHQQSSICYDPVFFVKTQMQSVVK 361
Query: 363 DAQNSSLFVRSRLTNDNIMRCHRALVTPTKICLLGPELEASNYIVKNFSAHTSDFMRVTF 422
++S RLT NIM C RA VTP+KI LLGPELE +NY+VKNF+ H SDFMRVTF
Sbjct: 362 KMKHSPASAYKRLTEQNIMSCQRAYVTPSKIYLLGPELETANYVVKNFAEHVSDFMRVTF 421
Query: 423 VDEDWGKLHPMAVSVSTEQGIFSKPFRTDVYHRILSILREGIVIGDKRFEFLAFSASQLR 482
V+EDW KL A+SV++++G F KP RT++Y+R+LSIL EGI +G KRFEFLAFSASQLR
Sbjct: 422 VEEDWSKLPANALSVNSKEGYFVKPSRTNIYNRVLSILGEGITVGPKRFEFLAFSASQLR 481
Query: 483 SNSVWMFASNDKVKADDIREWMGSFNKIRSISKCAARMGQLFSAAWQTVVVPVQDVEVIP 542
NSVWMFASN+KVKA+DIREWMG F KIRSISKCAARMGQLFSA+ QT++V QDVE IP
Sbjct: 482 GNSVWMFASNEKVKAEDIREWMGCFRKIRSISKCAARMGQLFSASRQTLIVRAQDVEQIP 541
Query: 543 DIELNSDGIDYCFSDGIGKISLSFARQVAQKCGVEHTPSAFQIRYGGYKGVVAVDRNSFR 602
DIE+ +DG DYCFSDGIGKISL+FA+QVAQKCG+ H PSAFQIRYGGYKGV+AVDR+SFR
Sbjct: 542 DIEVTTDGADYCFSDGIGKISLAFAKQVAQKCGLSHVPSAFQIRYGGYKGVIAVDRSSFR 601
Query: 603 KLSLRSSMLKFESKNRMLNVTKCNKSQSCYLNREIVTLLTTLGVEDSSLEALLQEHMRLL 662
KLSLR SMLKF+S NRMLNVT+ +S C+LNREI+ LL+TLG+ED+ EA+ H+ +L
Sbjct: 602 KLSLRDSMLKFDSNNRMLNVTRWTESMPCFLNREIICLLSTLGIEDAMFEAMQAVHLSML 661
Query: 663 ANTLTSRDAALALLESTDMGESKT-LVKMLRHGFEPNSEPYLLMMLRAYLESQLSDLRGR 722
N L RDAAL +L+ SK LVKML G+ P+SEPYL MMLR + ESQLS+L+ R
Sbjct: 662 GNMLEDRDAALNVLQKLSGENSKNLLVKMLLQGYAPSSEPYLSMMLRVHHESQLSELKSR 721
Query: 723 CRLYVPKGRVLLGCLDETGILNYGQIFVRLTLRKTELENMDPSIFHKLDEKTAILTGTVV 782
CR+ VPKGR+L+GC+DE GIL YGQ++VR+TL K EL++ D S F K+DE+T+++ G VV
Sbjct: 722 CRILVPKGRILIGCMDEMGILEYGQVYVRVTLTKAELKSRDQSYFRKIDEETSVVIGKVV 781
Query: 783 VTKNPCLHPGDVRVLEAVYEVALEEKGLIDCLIFPQKGERPHPNECSGGDLDGDLYFISW 842
VTKNPCLHPGD+RVL+A+YEV EEKG +DC+IFPQKGERPHPNECSGGDLDGD +F+SW
Sbjct: 782 VTKNPCLHPGDIRVLDAIYEVHFEEKGYLDCIIFPQKGERPHPNECSGGDLDGDQFFVSW 841
Query: 843 DEKLIPPRTVAPMDYTGCRPRIMDHDVTMEEIQRFFVDYMISDTLGTISTAHLVLADREP 902
DEK+IP PMDY G RPR+MDHDVT+EEI +FFVDYMISDTLG ISTAHLV ADR+P
Sbjct: 842 DEKIIPSEMDPPMDYAGSRPRLMDHDVTLEEIHKFFVDYMISDTLGVISTAHLVHADRDP 901
Query: 903 EKALSPKCLRLAELHSMAVDYAKTGAPAEMPNVLKPKEYPDFMERWDRPTYISQGILGKL 962
EKA S KCL LA LHS AVD+AKTGAPAEMP LKP+E+PDF+ER+++PTYIS+ + GKL
Sbjct: 902 EKARSQKCLELANLHSRAVDFAKTGAPAEMPYALKPREFPDFLERFEKPTYISESVFGKL 961
Query: 963 YRATVSATIPSSDFKWSEETARAAYDSDLEVPGFEAFIDTAKSCKEMYMEKMSMLLMFYG 1022
YRA S+ SE+T AYD LE GFE+FI+TAK+ ++MY EK++ L+++YG
Sbjct: 962 YRAVKSSLAQRKPEAESEDT--VAYDVTLEEAGFESFIETAKAHRDMYGEKLTSLMIYYG 1021
Query: 1023 ANSEDEILTGNLRSKSIYLRKDNRRYRELTDRILISVKSLQKEAKGWFENSC-GEEDRQK 1082
A +E+EILTG L++K +YL +DNRRY ++ DRI +SVK L KEA GWFE SC E+ ++K
Sbjct: 1022 AANEEEILTGILKTKEMYLARDNRRYGDMKDRITLSVKDLHKEAMGWFEKSCEDEQQKKK 1081
Query: 1083 MASAWYHVTYHPDHCHDSDNCLGFPWTVHDVLVTIKSANRKQ 1116
+ASAWY+VTY+P+H + L FPW V DVL+ IK+ N ++
Sbjct: 1082 LASAWYYVTYNPNHRDEKLTFLSFPWIVGDVLLDIKAENAQR 1120
BLAST of Spo04141.1 vs. TAIR (Arabidopsis)
Match:
AT1G14790.1 (RNA-dependent RNA polymerase 1)
HSP 1 Score: 750.7 bits (1937), Expect = 1.300e-216
Identity = 454/1132 (40.11%), Postives = 664/1132 (58.66%), Query Frame = 1
Query: 12 TVRVSNIPTTATAQDIFDFLESKIGKGTIFAIEIFTEKKNWKSKGHGRVQFESLDSKSKA 71
T++V P +A+++ FLE G GT++AI++ KK + + VQF S + ++
Sbjct: 4 TIQVFGFPNGVSAEEVKKFLERLTGSGTVYAIKVRQPKKGGP-RVYAIVQFTS-ERHTRL 63
Query: 72 QELALENDLLFKGCPLSLSSSHEDVVVRPIEPSCRGVRG-DVYVGLMKEEDQMCVIDTLE 131
A L + L +D+V +P S + G ++ G C + T +
Sbjct: 64 IITAAAERLYYGRSYLKAFEVEQDIVPKP-RASLHTISGLKMFFG--------CQVSTKK 123
Query: 132 DAKIWVMPDRNCVVFHLELEG---------KFYKMEVHFDDIFEAFGCYFDEQSPA---- 191
+W D CV F + + K Y++E+ +++I++ D SP
Sbjct: 124 FLTLWSAQDV-CVSFGIGMRKLHFSFSWYQKDYRLELSYENIWQ-----IDLHSPQGRSS 183
Query: 192 --ILLKLKYAPKIYQRISGPNLYTRFTADRYHICKEDLEFIWVRTTDISKSNSIGLSSAF 251
+++++ APKI+++ P D Y ++ W+RTTD + S+ IG S+AF
Sbjct: 184 KFLVIQVIGAPKIFEKEDQPINLLFGIMDFYSDGSDEQ---WIRTTDFTSSSCIGQSTAF 243
Query: 252 CWEIGEGSMGLDFFSTIPFYRKI-LENFVLEEYDEYSS-VSGLVPLVKCENNLKLDYEIL 311
C E+ DF Y + +F++E YSS + LVP+V L +EIL
Sbjct: 244 CLELPVHLNVPDFRENFANYAEHRASSFLIESGSSYSSNANTLVPVVDPPPGFSLPFEIL 303
Query: 312 FQINSLVHTLKISLADVTTELIDFLSTLSIDRAHM--VLQKVHKLSSTCYEPLSFIKTQV 371
F++N+LV +S + + L+ DRA + L+K+ L CYEP +++ +
Sbjct: 304 FKLNTLVQNACLSGPALDLDFYRLLNQKKYDRALIDHCLEKLFHLGECCYEPAHWLRDEY 363
Query: 372 QALDDAQNSSLFVRSRLTNDNIMRCHRALVTPTKICLLGPELEASNYIVKNFSAHTSDFM 431
+ L L +D ++ +R VTP ++ GPE+ SN +++++S + ++F+
Sbjct: 364 KKWISKGKLPLSPTISL-DDGLVYMYRVQVTPARVYFSGPEVNVSNRVLRHYSKYINNFL 423
Query: 432 RVTFVDEDWGKLHPMAVSVSTEQGIFSKPFRTDVYHRILSILREGIVIGDKRFEFLAFSA 491
RV+FVDED K+ M +S + S RT +Y RI S+LR+GIVIGDK+FEFLAFS+
Sbjct: 424 RVSFVDEDLEKVRSMDLSPRS-----STQRRTKLYDRIYSVLRDGIVIGDKKFEFLAFSS 483
Query: 492 SQLRSNSVWMFASNDKVKADDIREWMGSFNKIRSISKCAARMGQLFSAAWQTVVVPVQDV 551
SQLR NS WMFA D++ A IR WMG F+ IR+++K AAR+GQ FS++ +T+ V ++
Sbjct: 484 SQLRENSAWMFAPIDRITAAHIRAWMGDFDHIRNVAKYAARLGQSFSSSRETLNVRSDEI 543
Query: 552 EVIPDIELNSDGIDYCFSDGIGKISLSFARQVAQKCGV-EHTPSAFQIRYGGYKGVVAVD 611
EVIPD+E+ S G Y FSDGIGKIS FAR+VA+KCG+ E +PSAFQIRYGGYKGVVAVD
Sbjct: 544 EVIPDVEIISLGTRYVFSDGIGKISAEFARKVARKCGLTEFSPSAFQIRYGGYKGVVAVD 603
Query: 612 RNSFRKLSLRSSMLKFESKNRMLNVTKCNKSQSCYLNREIVTLLTTLGVEDSSLEALLQE 671
NS +KLSLR SM KFES+N L+V +K Q CY+NR+++TLL+TLGV DS E +E
Sbjct: 604 PNSSKKLSLRKSMSKFESENTKLDVLAWSKYQPCYMNRQLITLLSTLGVTDSVFEKKQRE 663
Query: 672 HMRLLANTLTSRDAALALLESTDMGESKTLVK-MLRHGFEPNSEPYLLMMLRAYLESQLS 731
+ L LT A L GE+ ++K ++ G++P++EP+L MML+ + S+L
Sbjct: 664 VVDRLDAILTHPLEAHEALGLMAPGENTNILKALILCGYKPDAEPFLSMMLQNFRASKLL 723
Query: 732 DLRGRCRLYVPKGRVLLGCLDETGILNYGQIFVRLTLRKTELENMDPSIFHKLDEKTAIL 791
+LR + R+++ GR ++GCLDET L YGQ+ V+ + + M P + I+
Sbjct: 724 ELRTKTRIFISGGRSMMGCLDETRTLEYGQVVVQYS------DPMRPG-------RRFII 783
Query: 792 TGTVVVTKNPCLHPGDVRVLEAVYEVALEEKGLIDCLIFPQKGERPHPNECSGGDLDGDL 851
TG VVV KNPCLHPGDVRVL+AV AL ++DC++FPQKG RPHPNECSG DLDGD+
Sbjct: 784 TGPVVVAKNPCLHPGDVRVLQAVNVPALNH--MVDCVVFPQKGLRPHPNECSGSDLDGDI 843
Query: 852 YFISWDEKLIPPRTVAPMDYTGCRPRIMDHDVTMEEIQRFFVDYMISDTLGTISTAHLVL 911
YF+ WD++L+PPRT PMDYT +I+DHDVT+EE++ +F +Y+++D+LG I+ AH
Sbjct: 844 YFVCWDQELVPPRTSEPMDYTPEPTQILDHDVTIEEVEEYFANYIVNDSLGIIANAHTAF 903
Query: 912 ADREPEKALSPKCLRLAELHSMAVDYAKTGAPAEMPNVLKPKEYPDFMERWDRPTYISQG 971
AD+EP KA S C+ LA+ S AVD+ KTG A +P L KEYPDFME+ D+PTY S+
Sbjct: 904 ADKEPLKAFSDPCIELAKKFSTAVDFPKTGVAAVIPQHLYVKEYPDFMEKPDKPTYESKN 963
Query: 972 ILGKLYRATVSATIPSSDFK-WSEETARAAYDSDLEVPGFEAFIDTAKSCKEMYMEKMSM 1031
++GKL+R P K ++ + A +YD D+EV GFE ++D A K Y K+
Sbjct: 964 VIGKLFREVKERAPPLISIKSFTLDVASKSYDKDMEVDGFEEYVDEAFYQKANYDFKLGN 1023
Query: 1032 LLMFYGANSEDEILTGNL--RSKSIYLRKDNRRYRELTDRILISVKSLQKEAKGWFENSC 1091
L+ +YG +E EIL+G + SKS R+D + I +V++L+KE F S
Sbjct: 1024 LMDYYGIKTEAEILSGGIMRMSKSFTKRRD-------AESIGRAVRALRKETLSLFNASE 1083
Query: 1092 GEEDRQKMASAWYHVTYHPDHCH------DSDNCLGFPWTVHDVLVTIKSAN 1113
EE+ ASAWYHVTYH + + D+ L F W V+D LV IK N
Sbjct: 1084 EEENESAKASAWYHVTYHSSYWGLYNEGLNRDHFLSFAWCVYDKLVRIKKTN 1087
BLAST of Spo04141.1 vs. TAIR (Arabidopsis)
Match:
AT3G49500.1 (RNA-dependent RNA polymerase 6)
HSP 1 Score: 521.5 bits (1342), Expect = 1.200e-147
Identity = 328/865 (37.92%), Postives = 475/865 (54.91%), Query Frame = 1
Query: 288 LDYEILFQINSLVHTLKISLADVTTELIDFLSTLSIDRAHMVLQKVHKLSSTCYEPLSFI 347
+ +EI+F +NS++H + +T D L D L+ + ++ +
Sbjct: 326 ISFEIMFLVNSVLHRGVFNQFQLTERFFDLLRNQPKDVNIASLKHLCTYKRPVFDAYKRL 385
Query: 348 KTQVQALDDAQNSSLFVRSRLTNDNIMRCHRALVTPTKICLLGPELEASNYIVKNFSAHT 407
K + + Q + + S +++I R ++TPT+ L PE+E SN +++ + A
Sbjct: 386 KLVQEWI---QKNPKLLGSHEQSEDISEIRRLVITPTRAYCLPPEVELSNRVLRRYKAVA 445
Query: 408 SDFMRVTFVDEDWGKLHPMAVSVSTE---QGIFSKPF--RTDVYHRILSILREGIVIGDK 467
F+RVTF+DE ++ +S + + S F +T V+ R+ SIL +G + +
Sbjct: 446 ERFLRVTFMDESMQTINSNVLSYFVAPIVKDLTSSSFSQKTYVFKRVKSILTDGFKLCGR 505
Query: 468 RFEFLAFSASQLRSNSVWMFASNDKVKADDIREWMGSFNKIRSISKCAARMGQLFSAAWQ 527
++ FLAFSA+QLR S W FA + K + DI+ WMG F K ++++KCAARMG FS+ +
Sbjct: 506 KYSFLAFSANQLRDRSAWFFAEDGKTRVSDIKTWMGKF-KDKNVAKCAARMGLCFSSTYA 565
Query: 528 TVVVPVQDVEV-IPDIELNSDGIDYCFSDGIGKISLSFARQVAQKC--GVEHTPSAFQIR 587
TV V +V+ +PDIE N Y FSDGIG I+ A +V +K V ++P A+QIR
Sbjct: 566 TVDVMPHEVDTEVPDIERNG----YVFSDGIGTITPDLADEVMEKLKLDVHYSPCAYQIR 625
Query: 588 YGGYKGVVA--VDRNSFRKLSLRSSMLKFESKNRMLNVTKCNKSQSCYLNREIVTLLTTL 647
Y G+KGVVA ++ +L+LR SM KF SK+ +L + + Q +LNR+I+TLL+ L
Sbjct: 626 YAGFKGVVARWPSKSDGIRLALRDSMKKFFSKHTILEICSWTRFQPGFLNRQIITLLSVL 685
Query: 648 GVEDSSLEALLQEHMRLLANTLTSRDAALALLESTDMGESKTLVKMLRHGFEPNSEPYLL 707
GV D + + + L L D A +L ++ + T ML GF+P +EP+L
Sbjct: 686 GVPDEIFWDMQESMLYKLNRILDDTDVAFEVLTASCAEQGNTAAIMLSAGFKPKTEPHLR 745
Query: 708 MMLRAYLESQLSDLRGRCRLYVPKGRVLLGCLDETGILNYGQIFVRLTLRKTELEN---M 767
ML + +QL LR + R++V GR L+GCLDE GIL +GQ F++++ K +EN
Sbjct: 746 GMLSSVRIAQLWGLREKSRIFVTSGRWLMGCLDEAGILEHGQCFIQVS--KPSIENCFSK 805
Query: 768 DPSIFHKLDEKTAILTGTVVVTKNPCLHPGDVRVLEAVYEVALEEKGLIDCLIFPQKGER 827
S F + ++ G V + KNPCLHPGDVR+LEAV L + DCLIFPQKG+R
Sbjct: 806 HGSRFKETKTDLEVVKGYVAIAKNPCLHPGDVRILEAVDVPQLHH--MYDCLIFPQKGDR 865
Query: 828 PHPNECSGGDLDGDLYFISWDEKLIPP--RTVAPMDYTGCRPRIMDHDVTMEEIQRFFVD 887
PH NE SG DLDGDLYF++WD+KLIPP ++ M Y + + V ++I FF
Sbjct: 866 PHTNEASGSDLDGDLYFVAWDQKLIPPNRKSYPAMHYDAAEEKSLGRAVNHQDIIDFFAR 925
Query: 888 YMISDTLGTISTAHLVLADREPEKALSPKCLRLAELHSMAVDYAKTGAPAEMPNVLKPKE 947
+ ++ LGTI AH+V ADR A+ +CL LAEL + AVD+ KTG MP LKPK
Sbjct: 926 NLANEQLGTICNAHVVHADRSEYGAMDEECLLLAELAATAVDFPKTGKIVSMPFHLKPKL 985
Query: 948 YPDFMERWDRPTYISQGILGKLYRATVSATIPSSDFKWSEETARAA--YDSDLEVPGFEA 1007
YPDFM + D TY S ILG+LYR ++ E T +A YD+ LE+PGFE
Sbjct: 986 YPDFMGKEDYQTYKSNKILGRLYRRVKEVYDEDAEASSEESTDPSAIPYDAVLEIPGFED 1045
Query: 1008 FIDTAKSCKEMYMEKMSMLLMFYGANSEDEILTGNLRSKSIYLRKDNRRYRELTDRILIS 1067
I A K +Y ++ LL Y E+EI+TG++ S Y K + EL +R+ S
Sbjct: 1046 LIPEAWGHKCLYDGQLIGLLGQYKVQKEEEIVTGHIWSMPKYTSK---KQGELKERLKHS 1105
Query: 1068 VKSLQKEAKGWFE------NSCGEEDR----QKMASAWYHVTYHPD------HCHDSDN- 1115
SL+KE + FE + EE++ +K ASAWYHVTYHP+ D D
Sbjct: 1106 YNSLKKEFRKVFEETIPDHENLSEEEKNILYEKKASAWYHVTYHPEWVKKSLELQDPDES 1165
BLAST of Spo04141.1 vs. TAIR (Arabidopsis)
Match:
AT2G19920.1 (RNA-dependent RNA polymerase family protein)
HSP 1 Score: 131.3 bits (329), Expect = 3.600e-30
Identity = 157/593 (26.48%), Postives = 251/593 (42.33%), Query Frame = 1
Query: 446 YHRILSILREGIVIGDKRFEFLAFS----ASQLRSNSVWMF----------ASNDK---- 505
Y + I + GI++G +R++F F A + + NS AS+D
Sbjct: 268 YSKYKEIAKNGIMVGLRRYQFFVFKDGGKAEKKKRNSTKQVKCYFIRTGSTASSDMENPY 327
Query: 506 -VKADDIREWMGSFNKIRSISKCAARMGQLFSAAWQTVVVPVQDVEV----IPDIE---- 565
+ I E F + ++ A M + +T + V E+ I DI
Sbjct: 328 ILSGMSIHEARMHFMHVHTLPSPANYMARFSLILSKTKKLEVDMTEITVMQIDDIHCHDQ 387
Query: 566 -----LNSDGIDYCFSDGIGKISLSFARQVA--------------QKCGVEHTPSAFQIR 625
L+ +G SDG G IS AR Q V+ P QIR
Sbjct: 388 SNNDVLDKNGKPRIHSDGTGYISEDLARMCPLNIFKGKSMRSNNIQGTCVQEPPLLIQIR 447
Query: 626 Y----GGYKGVVAVDRN-SFRKLSLRSSMLK---------FESKNRMLNVTKCNKSQSCY 685
KG+ +++N + + +R SM+K F + N + VT N +
Sbjct: 448 MFNDGSAVKGIFLLNKNLPPQTVQVRPSMIKVYKDKNLSNFSTFNSLEVVTTSNPPKRAK 507
Query: 686 LNREIVTLLTTLGV-EDSSLEALLQEHMRLLANTLTSRDAALALLESTDMGESKTLVKML 745
L++ +V LL+ GV D L+ LL + R A A L +M + K ++M+
Sbjct: 508 LSKNLVALLSYGGVPNDFFLDILLNTLEKKKTIFFKVRAAGKAALHYGNM-DDKNALQMI 567
Query: 746 RHGFEPNSEPYLLMMLRAYLESQLSDLRGRCRLYVPKGRVLLGCLDETGILNYGQIFVRL 805
G P EPYL L L+ + DL+ +L + + L+G +D TG
Sbjct: 568 MAGI-PLDEPYLKHYLSKLLKLEKDDLKAG-KLPIDESYYLMGTVDPTG----------- 627
Query: 806 TLRKTELENMDPSIFHKLDEKTAILTGTVVVTKNPCLHPGDVRVLEAVYEVALEEK--GL 865
L++ E+ + S V+V +NP LH GD+ +L+A Y +LE+
Sbjct: 628 ELKEDEVSGLAKS-------------QDVLVYRNPGLHFGDIHILKATYVKSLEQYVGNS 687
Query: 866 IDCLIFPQKGERPHPNECSGGDLDGDLYFISWDEKLI-------PPRTVAPMD--YTGCR 925
+ FPQKG R +E +GGD DGD+YFIS + KL+ P + +P YTG +
Sbjct: 688 KYGVFFPQKGPRSLGDEIAGGDFDGDMYFISRNPKLLEHYKPSEPWVSSSPRSKIYTGRQ 747
Query: 926 PRIMDHDVTMEEIQRFFV--DYMISDTLGTISTAHLVLADR--------EPEKA-LSPKC 956
P + + EE+ + F+ + S +G + + L + DR EKA + K
Sbjct: 748 PSELSPEQLEEELFKIFLKTGFSPSSVIGQAADSWLAIMDRFLTLGDENVKEKAEMKKKM 807
BLAST of Spo04141.1 vs. TAIR (Arabidopsis)
Match:
AT2G19930.1 (RNA-dependent RNA polymerase family protein)
HSP 1 Score: 128.3 bits (321), Expect = 3.000e-29
Identity = 140/496 (28.23%), Postives = 225/496 (45.36%), Query Frame = 1
Query: 549 SDGIGKISLSFAR--------------QVAQKCGVEHTPSAFQIR--YGGY--KGVVAVD 608
SDG G IS AR + Q+ + P Q R Y GY KG ++
Sbjct: 399 SDGTGYISEDLARMCPLNIFKGKCLRSESIQEACYQDPPLLIQFRMFYDGYAVKGTFLLN 458
Query: 609 RNSF-RKLSLRSSMLK---------FESKNRMLNVTKCNKSQSCYLNREIVTLLTTLGVE 668
+ R + +R SM+K F + N + VT N + L++ +V LL+ G+
Sbjct: 459 KKLCPRTVQVRPSMIKVSKDPSLSNFSTFNALEVVTTSNPPKRTKLSKNLVALLSYGGIP 518
Query: 669 DSS-LEALL---QEHMRLLANTLTSRDAALALLESTDMGESKTLVKMLRHGFEPNSEPYL 728
+ L+ LL +E + N + +AAL E D ++ ++ + P EP+L
Sbjct: 519 NEFFLDILLNTLEESKSIFYNKRAALNAALNYGEMDDQNAAQMILVGI-----PLDEPHL 578
Query: 729 LMMLRAYLESQLSDLRGRCRLYVPKGRVLLGCLDETGILNYGQIFVRLTLRKTELENMDP 788
L L+++ +DL+ +L V + L+G +D TG L ++ V L
Sbjct: 579 KNYLSILLKTEKNDLKAG-KLPVTESYYLMGTVDPTGALKEDEVCVIL------------ 638
Query: 789 SIFHKLDEKTAILTGTVVVTKNPCLHPGDVRVLEAVYEVALEEK--GLIDCLIFPQKGER 848
++ ++G V+V +NP LH GD+ +L+A Y ALEE + FPQKG R
Sbjct: 639 --------ESGQISGEVLVYRNPGLHFGDIHILKATYVKALEEYVGNSKFAVFFPQKGPR 698
Query: 849 PHPNECSGGDLDGDLYFISWDEKLI-------PPRTVAP--MDYTGCRPRIMDHDVTMEE 908
+E +GGD DGD+YFIS + +L+ P ++ P +G P + + EE
Sbjct: 699 SLGDEIAGGDFDGDMYFISRNPELLENFKPSEPWVSLTPPSKSNSGRAPSQLSPEELEEE 758
Query: 909 IQRFFV--DYMISDTLG-------TISTAHLVLA-DREPEKA-LSPKCLRLAELHSMAVD 968
+ F+ + S+ +G TI L+L DR EKA + K L L +++ A+D
Sbjct: 759 LFEMFLTAGFHASNVIGIAADSWLTIMDRFLILGDDRAEEKAEMKKKMLELIDIYYDALD 818
Query: 969 YAKTGAPAEMPNVLKPKEYPDFMERWDRPTYISQGILGKLYRATVSATIPSSDFKWSEET 990
K G +PN LKP +P +MER + + S ILG ++ DF S+ T
Sbjct: 819 APKKGDKVYLPNKLKPDIFPHYMERDKK--FQSTSILGLIF-----------DFVKSQTT 855
The following BLAST results are available for this feature: