Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AATCCGTACAATCCGAATCAAACAGAATAACAAGTCACTATTAAACCTCGTACTTAACGGATCCCGAGAATTAATATTAACATTCTAATTAATTTTTGTACCTACTAATCCATTCTTTAATTATCACTTAACCCCTTAGGGCATTAGATTAACCTTTTCATGGAAGTTTAATCTTTGTAATCAACACTTTGATTTATTGCCAGAATTGTGAAATTTCTTTAACACAATAAATAATTTCCCTCAAATTGTGATTTTGTTTCCAGAGAATTTGCTGAAATTACCACACAATGGTGAGCCCTAATCAAGTCAGAAACGCCCTTGGAATTATAGGTACAATTTCTTTCTTTCTTTCTTTTTTTTTAATTTTTTTTTATTAACTTTGATTTATTTTTTGTTTTTAATATCATCCAATTGTTGTATAATGTTGCAGGAAATGTCATATCGTTTGGTCTCTTCCTTTCACCTTCGTAAGTTTTTTCTTCCAATTTACTACGAATTCTTTATTAGTTACGATGTTTTATTTAGATATAAACCTTAAATATCTTATAATTATCAACAGGCCAACTTTCTACCGAATTATCAAGAACAAATCTGTCGAAGAGTTTAAGCCATGGCCATATGTTGTTACCGTACTAAATTGTTTGTTTTGGATGTTGTACGGTCTTCCCGTCACACATCCAAATAACATCCTTGTGACTACTATTAACGGCATTGGTTTGGGCATAGAGCTCATCTACGTCGCCATCTTCCTCTTTTATTCATCTGGCACAAAAAGGGTACATAACATATTTATTTATTTTAATTTATATTTCATACTATAATGAATTTGAACGAGTAATGTGACAATAATTGTTTTATCTATTACAGCAAAAGGTCTTGGGGACTTTGATCGTAGAAGTCATCATCTTTGCGGTAGTATTGGTTTTAACCTTGAAGGTGTTCCACACCACAGACGCTAGGACTATATTTGTTGGAGTATTTTGTGTCATCTTCAACTGTTTCATGTACTTTTCACCATTGTTGGCAATGGTATGTACAATTTCTATCAATCTTTTTTACTCTATAATTTTACGCGTATAATTTCTCTTTTAATTTACGCGTATAGTTTATCTTTTAAAATATAAAAACAAAACAATTGTTGTTGTTACAGACACAAGTGGTGAAATCGAAGAGTGTGGAATACATGCCCTTCCTTCTAACACTCACTGGATTCCTTAATGGTCTTTGCTGGACTTCATATGCATTGATCCATATTGATTGGTGGATGGTGGTAAGTTTTTATAACTCGAACTGTAATACCTCGTATTTTTATAGTTTAATTATGTTATTTTATATTATTACCGCGACTAATTTACTGATTTTAATGGCAGGTTCCAAATGGTTTGGGCACATTGTCTGGAATAATGCAGCTCGTCTTGTACGGAATTTACTACAAGCGAAAATCGAACACATCCAATGAAGTTGAACTCCCAACAAAGATGGCTACTGAAGTTTAAGTTGAATGATCTCATTATCTCAATAGTCTTTTTAGTTTTATTGCTTTAGATAAACCATAGTAGTTGATAGTTAGAGAAGAGTTTTGCAGAAGATGTTTAGTTTATATTTTGTTTCATACTTTAGAAAGTTTTCAATACAATTTTGATTTTTTCGGATTATACTTTGTTTTTCGTCTAATATTTGTGCAATTATATTCTAAGGAGTAATTTGTATGGAAAATTTGAGTACCTTTTAAAAATAATTTGAAGTAGAGGAATTGTGTTTTGAAAACTTCAAAATAACGTAAAACTTTTAAAACTCACTCAGAATAGATAAATTAACTTAAGCTAGATAAATTCACAAAAATAAGTGAACTCAAGTGAAGAACAAGCATCCTTAATATCTTACTGTTTAAGATGAATTGTGTTTCAAAATTATTTTGTTTAGAATTTTGCTCAAGGCCTGTTATGTAAAATAAGTTCAAATAATATAAGTTTGGAAAAAAAAGAGTTATTTTCAGAATTTTCACACACAAATAAGTTTATTTCAGACAAAATAAGTTTTTTTTCAGATAAAATAAGTTGAGCTTAGATAATATAAATTCAGTCAAAATAAATCCAATAGAACGGAGCCTAATATGTACTTAGTATGCGAACTGTAAAAAAAAGATGGAGGAATGAGTGACAGACAATGAGAAACAGGAGAAATTGATTTACAAGTCTGGCAAAAACTAATGCAGACTTCAAATTGGAACAACCAATAACTAGAATAGTTTTTTTTTTTTTTTTTTTTTCTCATCTATAAAATGCTCACATTACCTTTACTTTTTTTTCTTCACCATAATTACAAGGCTGGATGGTATCTCCTGCAAAAACCAAAGCAACAACCAATAATCCCAGACTATATATAGATATATATATAGGTCGGTTTGCTTGGGAAAGTTTTTAAAAGCCATATCTTCTAAGGTCCACGGCGTCTTTGGAAGCAGAAACAGCTTTGCTGCTGATCAACAGGGATCATCCCTCCACCTTTTGTCGTGTCAATCGCCTCCAACAACGAAACTACCTCGTCCATTTCGGGGCGCCTGTCGGGATTTGCATCCCAACATTTCTTCATTACATTTGCCAATGCACTCGGACAACATCTTGGCATTTCCGGCCTTAGGTTCTGAGGATCCCACGACAAACAATTTCAGCACTCGGAAAAAAGGGCAGGAATGTCAGAATTTCATGAGATGA AATCCGTACAATCCGAATCAAACAGAATAACAAGTCACTATTAAACCTCGTACTTAACGGATCCCGAGAATTAATATTAACATTCTAATTAATTTTTGTACCTACTAATCCATTCTTTAATTATCACTTAACCCCTTAGGGCATTAGATTAACCTTTTCATGGAAGTTTAATCTTTGTAATCAACACTTTGATTTATTGCCAGAATTGTGAAATTTCTTTAACACAATAAATAATTTCCCTCAAATTGTGATTTTGTTTCCAGAGAATTTGCTGAAATTACCACACAATGGTGAGCCCTAATCAAGTCAGAAACGCCCTTGGAATTATAGATATAAACCTTAAATATCTTATAATTATCAACAGGCCAACTTTCTACCGAATTATCAAGAACAAATCTGTCGAAGAGTTTAAGCCATGGCCATATGTTGTTACCGTACTAAATTGTTTGTTTTGGATGTTGTACGGTCTTCCCGTCACACATCCAAATAACATCCTTGTGACTACTATTAACGGCATTGGTTTGGGCATAGAGCTCATCTACGTCGCCATCTTCCTCTTTTATTCATCTGGCACAAAAAGGCAAAAGGTCTTGGGGACTTTGATCGTAGAAGTCATCATCTTTGCGGTAGTATTGGTTTTAACCTTGAAGGTGTTCCACACCACAGACGCTAGGACTATATTTGTTGGAGTATTTTGTGTCATCTTCAACTGTTTCATGTACTTTTCACCATTGTTGGCAATGACACAAGTGGTGAAATCGAAGAGTGTGGAATACATGCCCTTCCTTCTAACACTCACTGGATTCCTTAATGGTCTTTGCTGGACTTCATATGCATTGATCCATATTGATTGGTGGATGGTGGTTCCAAATGGTTTGGGCACATTGTCTGGAATAATGCAGCTCGTCTTGTACGGAATTTACTACAAGCGAAAATCGAACACATCCAATGAAGTTGAACTCCCAACAAAGATGGCTACTGAAGTCCACGGCGTCTTTGGAAGCAGAAACAGCTTTGCTGCTGATCAACAGGGATCATCCCTCCACCTTTTGTCGTGTCAATCGCCTCCAACAACGAAACTACCTCGTCCATTTCGGGGCGCCTGTCGGGATTTGCATCCCAACATTTCTTCATTACATTTGCCAATGCACTCGGACAACATCTTGGCATTTCCGGCCTTAGGTTCTGAGGATCCCACGACAAACAATTTCAGCACTCGGAAAAAAGGGCAGGAATGTCAGAATTTCATGAGATGA ATGGTGAGCCCTAATCAAGTCAGAAACGCCCTTGGAATTATAGATATAAACCTTAAATATCTTATAATTATCAACAGGCCAACTTTCTACCGAATTATCAAGAACAAATCTGTCGAAGAGTTTAAGCCATGGCCATATGTTGTTACCGTACTAAATTGTTTGTTTTGGATGTTGTACGGTCTTCCCGTCACACATCCAAATAACATCCTTGTGACTACTATTAACGGCATTGGTTTGGGCATAGAGCTCATCTACGTCGCCATCTTCCTCTTTTATTCATCTGGCACAAAAAGGCAAAAGGTCTTGGGGACTTTGATCGTAGAAGTCATCATCTTTGCGGTAGTATTGGTTTTAACCTTGAAGGTGTTCCACACCACAGACGCTAGGACTATATTTGTTGGAGTATTTTGTGTCATCTTCAACTGTTTCATGTACTTTTCACCATTGTTGGCAATGACACAAGTGGTGAAATCGAAGAGTGTGGAATACATGCCCTTCCTTCTAACACTCACTGGATTCCTTAATGGTCTTTGCTGGACTTCATATGCATTGATCCATATTGATTGGTGGATGGTGGTTCCAAATGGTTTGGGCACATTGTCTGGAATAATGCAGCTCGTCTTGTACGGAATTTACTACAAGCGAAAATCGAACACATCCAATGAAGTTGAACTCCCAACAAAGATGGCTACTGAAGTCCACGGCGTCTTTGGAAGCAGAAACAGCTTTGCTGCTGATCAACAGGGATCATCCCTCCACCTTTTGTCGTGTCAATCGCCTCCAACAACGAAACTACCTCGTCCATTTCGGGGCGCCTGTCGGGATTTGCATCCCAACATTTCTTCATTACATTTGCCAATGCACTCGGACAACATCTTGGCATTTCCGGCCTTAGGTTCTGAGGATCCCACGACAAACAATTTCAGCACTCGGAAAAAAGGGCAGGAATGTCAGAATTTCATGAGATGA MVSPNQVRNALGIIDINLKYLIIINRPTFYRIIKNKSVEEFKPWPYVVTVLNCLFWMLYGLPVTHPNNILVTTINGIGLGIELIYVAIFLFYSSGTKRQKVLGTLIVEVIIFAVVLVLTLKVFHTTDARTIFVGVFCVIFNCFMYFSPLLAMTQVVKSKSVEYMPFLLTLTGFLNGLCWTSYALIHIDWWMVVPNGLGTLSGIMQLVLYGIYYKRKSNTSNEVELPTKMATEVHGVFGSRNSFAADQQGSSLHLLSCQSPPTTKLPRPFRGACRDLHPNISSLHLPMHSDNILAFPALGSEDPTTNNFSTRKKGQECQNFMR Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo04133.1 vs. NCBI nr
Match: gi|731335474|ref|XP_010678743.1| (PREDICTED: bidirectional sugar transporter SWEET5-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 286.2 bits (731), Expect = 7.200e-74 Identity = 140/215 (65.12%), Postives = 171/215 (79.53%), Query Frame = 1
BLAST of Spo04133.1 vs. NCBI nr
Match: gi|593701345|ref|XP_007151090.1| (hypothetical protein PHAVU_004G017100g [Phaseolus vulgaris]) HSP 1 Score: 238.0 bits (606), Expect = 2.200e-59 Identity = 118/227 (51.98%), Postives = 162/227 (71.37%), Query Frame = 1
BLAST of Spo04133.1 vs. NCBI nr
Match: gi|593701347|ref|XP_007151091.1| (hypothetical protein PHAVU_004G017200g [Phaseolus vulgaris]) HSP 1 Score: 236.5 bits (602), Expect = 6.500e-59 Identity = 117/235 (49.79%), Postives = 162/235 (68.94%), Query Frame = 1
BLAST of Spo04133.1 vs. NCBI nr
Match: gi|473865477|gb|EMS47629.1| (Bidirectional sugar transporter SWEET6b [Triticum urartu]) HSP 1 Score: 234.2 bits (596), Expect = 3.200e-58 Identity = 121/248 (48.79%), Postives = 164/248 (66.13%), Query Frame = 1
BLAST of Spo04133.1 vs. NCBI nr
Match: gi|226532940|ref|NP_001150719.1| (seven-transmembrane-domain protein 1 [Zea mays]) HSP 1 Score: 233.8 bits (595), Expect = 4.200e-58 Identity = 117/228 (51.32%), Postives = 157/228 (68.86%), Query Frame = 1
BLAST of Spo04133.1 vs. UniProtKB/TrEMBL
Match: A0A0J8F495_BETVU (Bidirectional sugar transporter SWEET OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g116840 PE=3 SV=1) HSP 1 Score: 286.2 bits (731), Expect = 5.000e-74 Identity = 140/215 (65.12%), Postives = 171/215 (79.53%), Query Frame = 1
BLAST of Spo04133.1 vs. UniProtKB/TrEMBL
Match: V7BYR3_PHAVU (Bidirectional sugar transporter SWEET OS=Phaseolus vulgaris GN=PHAVU_004G017100g PE=3 SV=1) HSP 1 Score: 238.0 bits (606), Expect = 1.600e-59 Identity = 118/227 (51.98%), Postives = 162/227 (71.37%), Query Frame = 1
BLAST of Spo04133.1 vs. UniProtKB/TrEMBL
Match: V7C1A8_PHAVU (Bidirectional sugar transporter SWEET OS=Phaseolus vulgaris GN=PHAVU_004G017200g PE=3 SV=1) HSP 1 Score: 236.5 bits (602), Expect = 4.500e-59 Identity = 117/235 (49.79%), Postives = 162/235 (68.94%), Query Frame = 1
BLAST of Spo04133.1 vs. UniProtKB/TrEMBL
Match: W5HX69_WHEAT (Bidirectional sugar transporter SWEET OS=Triticum aestivum PE=3 SV=1) HSP 1 Score: 235.3 bits (599), Expect = 1.000e-58 Identity = 120/228 (52.63%), Postives = 152/228 (66.67%), Query Frame = 1
BLAST of Spo04133.1 vs. UniProtKB/TrEMBL
Match: W4ZT20_WHEAT (Bidirectional sugar transporter SWEET OS=Triticum aestivum PE=3 SV=1) HSP 1 Score: 234.2 bits (596), Expect = 2.200e-58 Identity = 121/248 (48.79%), Postives = 164/248 (66.13%), Query Frame = 1
BLAST of Spo04133.1 vs. ExPASy Swiss-Prot
Match: SWT7B_ORYSJ (Bidirectional sugar transporter SWEET7b OS=Oryza sativa subsp. japonica GN=SWEET7B PE=3 SV=2) HSP 1 Score: 231.5 bits (589), Expect = 1.300e-59 Identity = 117/229 (51.09%), Postives = 158/229 (69.00%), Query Frame = 1
BLAST of Spo04133.1 vs. ExPASy Swiss-Prot
Match: SWT7B_ORYSI (Bidirectional sugar transporter SWEET7b OS=Oryza sativa subsp. indica GN=SWEET7B PE=3 SV=1) HSP 1 Score: 229.9 bits (585), Expect = 3.800e-59 Identity = 116/229 (50.66%), Postives = 159/229 (69.43%), Query Frame = 1
BLAST of Spo04133.1 vs. ExPASy Swiss-Prot
Match: SWT6A_ORYSJ (Bidirectional sugar transporter SWEET6a OS=Oryza sativa subsp. japonica GN=SWEET6A PE=3 SV=1) HSP 1 Score: 226.1 bits (575), Expect = 5.500e-58 Identity = 114/231 (49.35%), Postives = 157/231 (67.97%), Query Frame = 1
BLAST of Spo04133.1 vs. ExPASy Swiss-Prot
Match: SWT6A_ORYSI (Bidirectional sugar transporter SWEET6a OS=Oryza sativa subsp. indica GN=SWEET6A PE=3 SV=1) HSP 1 Score: 226.1 bits (575), Expect = 5.500e-58 Identity = 114/231 (49.35%), Postives = 157/231 (67.97%), Query Frame = 1
BLAST of Spo04133.1 vs. ExPASy Swiss-Prot
Match: SWT6B_ORYSJ (Bidirectional sugar transporter SWEET6b OS=Oryza sativa subsp. japonica GN=SWEET6B PE=2 SV=1) HSP 1 Score: 224.2 bits (570), Expect = 2.100e-57 Identity = 111/231 (48.05%), Postives = 158/231 (68.40%), Query Frame = 1
BLAST of Spo04133.1 vs. TAIR (Arabidopsis)
Match: AT3G28007.1 (Nodulin MtN3 family protein) HSP 1 Score: 206.8 bits (525), Expect = 1.900e-53 Identity = 108/225 (48.00%), Postives = 149/225 (66.22%), Query Frame = 1
BLAST of Spo04133.1 vs. TAIR (Arabidopsis)
Match: AT5G62850.1 (Nodulin MtN3 family protein) HSP 1 Score: 204.9 bits (520), Expect = 7.400e-53 Identity = 100/215 (46.51%), Postives = 144/215 (66.98%), Query Frame = 1
BLAST of Spo04133.1 vs. TAIR (Arabidopsis)
Match: AT4G10850.1 (Nodulin MtN3 family protein) HSP 1 Score: 201.4 bits (511), Expect = 8.200e-52 Identity = 103/222 (46.40%), Postives = 145/222 (65.32%), Query Frame = 1
BLAST of Spo04133.1 vs. TAIR (Arabidopsis)
Match: AT5G40260.1 (Nodulin MtN3 family protein) HSP 1 Score: 192.2 bits (487), Expect = 5.000e-49 Identity = 108/233 (46.35%), Postives = 152/233 (65.24%), Query Frame = 1
BLAST of Spo04133.1 vs. TAIR (Arabidopsis)
Match: AT1G66770.1 (Nodulin MtN3 family protein) HSP 1 Score: 188.0 bits (476), Expect = 9.400e-48 Identity = 94/220 (42.73%), Postives = 143/220 (65.00%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo04133.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo04133.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo04133.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo04133.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
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