Spo04130 (gene)

Overview
NameSpo04130
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionNHL domain-containing protein, putative
LocationSpoScf_00523 : 213617 .. 214180 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCAAATGAAGAGAGAGTTATTATCGAAGATGACGCCGAATCACCAAGCAACCCCTTCATCCACCGCCATCGCTGCTGCTTTCAGTTGCCCTGCTTCGGTTCCTCCCCCACCTCCACCACACCTCGCCACATCACCCTCGGCGGCGGAGGAGCCAATTCTTCACTTTCCGATCCCTCTACTTCGTTTTGGGACCGATTCCGATCCGCCGAGAATGAACCCCGTTGGTGGTCACAACCTTTCAAAGCCTTCAAGAAAATTCGGGAATGGTCTGAGATTGTTGCTGGTCCCAAGTGGAAGACCTTCATCCGCCGTATCAATCGCCGCCGTCCTAACCACCGTCACCACCACCACCAACAACAACAATCCACTGGGCAGTTCCAGTACGATCCTTTGAGCTACGCGCTTAACTTCGATGAGGGTCCTGGGCAAAACGGTCATTTCGATGAGGATTATGATGCTGGTAACTTCCCCGATTTCTCCTCCCGCTTCGCCTCTGCCGCCACTCCTCCCCCTTCATCGAAGTCACCAGCAGAATTGGGTAACGGCGCGCCGGCTTGCTGA

mRNA sequence

ATGTCAAATGAAGAGAGAGTTATTATCGAAGATGACGCCGAATCACCAAGCAACCCCTTCATCCACCGCCATCGCTGCTGCTTTCAGTTGCCCTGCTTCGGTTCCTCCCCCACCTCCACCACACCTCGCCACATCACCCTCGGCGGCGGAGGAGCCAATTCTTCACTTTCCGATCCCTCTACTTCGTTTTGGGACCGATTCCGATCCGCCGAGAATGAACCCCGTTGGTGGTCACAACCTTTCAAAGCCTTCAAGAAAATTCGGGAATGGTCTGAGATTGTTGCTGGTCCCAAGTGGAAGACCTTCATCCGCCGTATCAATCGCCGCCGTCCTAACCACCGTCACCACCACCACCAACAACAACAATCCACTGGGCAGTTCCAGTACGATCCTTTGAGCTACGCGCTTAACTTCGATGAGGGTCCTGGGCAAAACGGTCATTTCGATGAGGATTATGATGCTGGTAACTTCCCCGATTTCTCCTCCCGCTTCGCCTCTGCCGCCACTCCTCCCCCTTCATCGAAGTCACCAGCAGAATTGGGTAACGGCGCGCCGGCTTGCTGA

Coding sequence (CDS)

ATGTCAAATGAAGAGAGAGTTATTATCGAAGATGACGCCGAATCACCAAGCAACCCCTTCATCCACCGCCATCGCTGCTGCTTTCAGTTGCCCTGCTTCGGTTCCTCCCCCACCTCCACCACACCTCGCCACATCACCCTCGGCGGCGGAGGAGCCAATTCTTCACTTTCCGATCCCTCTACTTCGTTTTGGGACCGATTCCGATCCGCCGAGAATGAACCCCGTTGGTGGTCACAACCTTTCAAAGCCTTCAAGAAAATTCGGGAATGGTCTGAGATTGTTGCTGGTCCCAAGTGGAAGACCTTCATCCGCCGTATCAATCGCCGCCGTCCTAACCACCGTCACCACCACCACCAACAACAACAATCCACTGGGCAGTTCCAGTACGATCCTTTGAGCTACGCGCTTAACTTCGATGAGGGTCCTGGGCAAAACGGTCATTTCGATGAGGATTATGATGCTGGTAACTTCCCCGATTTCTCCTCCCGCTTCGCCTCTGCCGCCACTCCTCCCCCTTCATCGAAGTCACCAGCAGAATTGGGTAACGGCGCGCCGGCTTGCTGA

Protein sequence

MSNEERVIIEDDAESPSNPFIHRHRCCFQLPCFGSSPTSTTPRHITLGGGGANSSLSDPSTSFWDRFRSAENEPRWWSQPFKAFKKIREWSEIVAGPKWKTFIRRINRRRPNHRHHHHQQQQSTGQFQYDPLSYALNFDEGPGQNGHFDEDYDAGNFPDFSSRFASAATPPPSSKSPAELGNGAPAC
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo04130.1Spo04130.1mRNA


Homology
[Close]
BLAST of Spo04130.1 vs. NCBI nr
Match: gi|902217405|gb|KNA17687.1| (hypothetical protein SOVF_077660 [Spinacia oleracea])

HSP 1 Score: 393.7 bits (1010), Expect = 1.800e-106
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 1 

		  

Query: 1   MSNEERVIIEDDAESPSNPFIHRHRCCFQLPCFGSSPTSTTPRHITLGGGGANSSLSDPS 60
           MSNEERVIIEDDAESPSNPFIHRHRCCFQLPCFGSSPTSTTPRHITLGGGGANSSLSDPS
Sbjct: 1   MSNEERVIIEDDAESPSNPFIHRHRCCFQLPCFGSSPTSTTPRHITLGGGGANSSLSDPS 60

Query: 61  TSFWDRFRSAENEPRWWSQPFKAFKKIREWSEIVAGPKWKTFIRRINRRRPNHRHHHHQQ 120
           TSFWDRFRSAENEPRWWSQPFKAFKKIREWSEIVAGPKWKTFIRRINRRRPNHRHHHHQQ
Sbjct: 61  TSFWDRFRSAENEPRWWSQPFKAFKKIREWSEIVAGPKWKTFIRRINRRRPNHRHHHHQQ 120

Query: 121 QQSTGQFQYDPLSYALNFDEGPGQNGHFDEDYDAGNFPDFSSRFASAATPPPSSKSPAEL 180
           QQSTGQFQYDPLSYALNFDEGPGQNGHFDEDYDAGNFPDFSSRFASAATPPPSSKSPAEL
Sbjct: 121 QQSTGQFQYDPLSYALNFDEGPGQNGHFDEDYDAGNFPDFSSRFASAATPPPSSKSPAEL 180

Query: 181 GNGAPAC 188
           GNGAPAC
Sbjct: 181 GNGAPAC 187
[Close]
BLAST of Spo04130.1 vs. NCBI nr
Match: gi|731335451|ref|XP_010678733.1| (PREDICTED: uncharacterized protein LOC104894243 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 240.0 bits (611), Expect = 3.400e-60
Identity = 131/195 (67.18%), Postives = 145/195 (74.36%), Query Frame = 1 

		  

Query: 1   MSNEERVI-IEDDAESPSNP----FIHRHRCCFQLPCFGSSPTSTTPRHITLGGGGANSS 60
           MS EERVI +E++ ESPSN     F HRHRCCF  P F   PTST  RH+TLGG    SS
Sbjct: 1   MSTEERVITLEEEDESPSNTTTTTFNHRHRCCFNFPYF--CPTST--RHVTLGGS-TTSS 60

Query: 61  LSDPSTSFWDRFRSAENEPRWWSQPFKAFKKIREWSEIVAGPKWKTFIRRINRRRPNHRH 120
           LSD + SFW RFR+A+   RWW++PFKAFKKIREWSEIVAGPKWKTFIR+ NRRR NHRH
Sbjct: 61  LSDQTPSFWTRFRTADTHNRWWARPFKAFKKIREWSEIVAGPKWKTFIRQFNRRRHNHRH 120

Query: 121 HHHQQQQSTGQFQYDPLSYALNFDEGPGQNGHFDEDYDAGNFPDFSSRFASAATPPPSS- 180
           HHH    S G+FQYDPLSYALNFDEGPGQNGHFDEDY+ G+FPDFSSRFA     P SS 
Sbjct: 121 HHH-HHNSNGKFQYDPLSYALNFDEGPGQNGHFDEDYN-GHFPDFSSRFAGVQQNPLSST 180

Query: 181 --KSPAELGNGAPAC 188
             KSP +    AP C
Sbjct: 181 PNKSPVDFDKDAPEC 188
[Close]
BLAST of Spo04130.1 vs. NCBI nr
Match: gi|731335453|ref|XP_010678734.1| (PREDICTED: uncharacterized protein LOC104894244 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 155.2 bits (391), Expect = 1.100e-34
Identity = 93/188 (49.47%), Postives = 118/188 (62.77%), Query Frame = 1 

		  

Query: 1   MSNEERVIIEDDAESPSNPFIHRHRCCFQLPCFGSSPTSTTPRHITLGGGGANSSLSDPS 60
           +S  ++ I ++D       F  + RCC  +PCFGS P+           GG + S S PS
Sbjct: 32  VSGHQQNITDEDEALIMETFSSKARCCSFIPCFGSRPSPAR-------SGGFSGSSSSPS 91

Query: 61  TSFWDRFR-SAENEPRWWSQPFKAFKKIREWSEIVAGPKWKTFIRRINRRRPNHRHHHHQ 120
              W+R + +AE E +WW+ P K  KKIREWSEI+AGPKWKTFIRR NR    +      
Sbjct: 92  --MWERLQQTAEIENKWWAGPLKGLKKIREWSEIIAGPKWKTFIRRFNRGTGKNG----- 151

Query: 121 QQQSTGQFQYDPLSYALNFDEGPGQNGHFDEDYDAGNFPDFSSRFASAATPPPSSKSPAE 180
              ++G+FQYDPLSYALNFD+GPGQNG+F+ED   G FPDFSSRFAS    P SS++  +
Sbjct: 152 --AASGKFQYDPLSYALNFDDGPGQNGNFEED---GYFPDFSSRFASI---PLSSRTSMD 197

Query: 181 LG-NGAPA 187
           LG NG PA
Sbjct: 212 LGKNGIPA 197
[Close]
BLAST of Spo04130.1 vs. NCBI nr
Match: gi|902163619|gb|KNA06855.1| (hypothetical protein SOVF_177190 [Spinacia oleracea])

HSP 1 Score: 151.0 bits (380), Expect = 2.100e-33
Identity = 90/188 (47.87%), Postives = 114/188 (60.64%), Query Frame = 1 

		  

Query: 1   MSNEERVIIEDDAESPSNPFIHRHRCCFQLPCFGSSPTSTTPRHITLGGGGANSSLSDPS 60
           +S  ++ +I+++       F   + CC   PCFG  P+    R   LGG       S  S
Sbjct: 21  VSLHQQQVIDENEALIMESFSSNNSCCSFFPCFGGQPSPN--RSSGLGG-------STSS 80

Query: 61  TSFWDRFR-SAENEPRWWSQPFKAFKKIREWSEIVAGPKWKTFIRRINRRRPNHRHHHHQ 120
            S W+R + +AE E +WW+ P +  KK+REWSEI+AGPKWKTFIRR NR          +
Sbjct: 81  PSMWERLQQTAEIENKWWAGPLQGLKKMREWSEIIAGPKWKTFIRRFNRGG--------K 140

Query: 121 QQQSTGQFQYDPLSYALNFDEGPGQNGHFDEDYDAGNFPDFSSRFASAATPPPSSKSPAE 180
               +G+FQYDPLSYALNFD+GPGQNGH DED   G FPDFSSRFAS    P SS+S  +
Sbjct: 141 SATGSGKFQYDPLSYALNFDDGPGQNGHLDED---GYFPDFSSRFASI---PKSSRSSID 185

Query: 181 LG-NGAPA 187
           LG NG P+
Sbjct: 201 LGKNGIPS 185
[Close]
BLAST of Spo04130.1 vs. NCBI nr
Match: gi|743849871|ref|XP_011028593.1| (PREDICTED: uncharacterized protein LOC105128567 [Populus euphratica])

HSP 1 Score: 136.7 bits (343), Expect = 4.100e-29
Identity = 80/167 (47.90%), Postives = 96/167 (57.49%), Query Frame = 1 

		  

Query: 14  ESPSNPFIHRHRCCFQLPCFGSSPTSTTPRHITLGGGGANSSLSDPSTSFWDRFRSAE-- 73
           E+ SN  +   RCCF  PCF S  +ST                     SFW+R +S+   
Sbjct: 30  ETTSNSLLTNTRCCFCFPCFSSRRSSTV------------------GLSFWERIQSSSQS 89

Query: 74  -----NEPRWWSQPFKAFKKIREWSEIVAGPKWKTFIRRINRRRP----NHRHHHHQQQQ 133
                N+ +WW +  +A KKIREWSEIVAGPKWKTFIRR+NR +     N R H      
Sbjct: 90  HGYGPNQNQWWFKGIRALKKIREWSEIVAGPKWKTFIRRLNRNKSSGSGNGRRH------ 149

Query: 134 STGQFQYDPLSYALNFDEGP-GQNGHFDEDYDAGNFPDFSSRFASAA 169
             G FQYDPLSY+LNFDEGP GQ G+FDE  D G F DFSSR+AS +
Sbjct: 150 --GNFQYDPLSYSLNFDEGPGGQKGNFDEMDDYGGFRDFSSRYASVS 170
[Close]
BLAST of Spo04130.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RFT5_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_077660 PE=4 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 1.300e-106
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 1 

		  

Query: 1   MSNEERVIIEDDAESPSNPFIHRHRCCFQLPCFGSSPTSTTPRHITLGGGGANSSLSDPS 60
           MSNEERVIIEDDAESPSNPFIHRHRCCFQLPCFGSSPTSTTPRHITLGGGGANSSLSDPS
Sbjct: 1   MSNEERVIIEDDAESPSNPFIHRHRCCFQLPCFGSSPTSTTPRHITLGGGGANSSLSDPS 60

Query: 61  TSFWDRFRSAENEPRWWSQPFKAFKKIREWSEIVAGPKWKTFIRRINRRRPNHRHHHHQQ 120
           TSFWDRFRSAENEPRWWSQPFKAFKKIREWSEIVAGPKWKTFIRRINRRRPNHRHHHHQQ
Sbjct: 61  TSFWDRFRSAENEPRWWSQPFKAFKKIREWSEIVAGPKWKTFIRRINRRRPNHRHHHHQQ 120

Query: 121 QQSTGQFQYDPLSYALNFDEGPGQNGHFDEDYDAGNFPDFSSRFASAATPPPSSKSPAEL 180
           QQSTGQFQYDPLSYALNFDEGPGQNGHFDEDYDAGNFPDFSSRFASAATPPPSSKSPAEL
Sbjct: 121 QQSTGQFQYDPLSYALNFDEGPGQNGHFDEDYDAGNFPDFSSRFASAATPPPSSKSPAEL 180

Query: 181 GNGAPAC 188
           GNGAPAC
Sbjct: 181 GNGAPAC 187
[Close]
BLAST of Spo04130.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CEI5_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g116680 PE=4 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 2.400e-60
Identity = 131/195 (67.18%), Postives = 145/195 (74.36%), Query Frame = 1 

		  

Query: 1   MSNEERVI-IEDDAESPSNP----FIHRHRCCFQLPCFGSSPTSTTPRHITLGGGGANSS 60
           MS EERVI +E++ ESPSN     F HRHRCCF  P F   PTST  RH+TLGG    SS
Sbjct: 1   MSTEERVITLEEEDESPSNTTTTTFNHRHRCCFNFPYF--CPTST--RHVTLGGS-TTSS 60

Query: 61  LSDPSTSFWDRFRSAENEPRWWSQPFKAFKKIREWSEIVAGPKWKTFIRRINRRRPNHRH 120
           LSD + SFW RFR+A+   RWW++PFKAFKKIREWSEIVAGPKWKTFIR+ NRRR NHRH
Sbjct: 61  LSDQTPSFWTRFRTADTHNRWWARPFKAFKKIREWSEIVAGPKWKTFIRQFNRRRHNHRH 120

Query: 121 HHHQQQQSTGQFQYDPLSYALNFDEGPGQNGHFDEDYDAGNFPDFSSRFASAATPPPSS- 180
           HHH    S G+FQYDPLSYALNFDEGPGQNGHFDEDY+ G+FPDFSSRFA     P SS 
Sbjct: 121 HHH-HHNSNGKFQYDPLSYALNFDEGPGQNGHFDEDYN-GHFPDFSSRFAGVQQNPLSST 180

Query: 181 --KSPAELGNGAPAC 188
             KSP +    AP C
Sbjct: 181 PNKSPVDFDKDAPEC 188
[Close]
BLAST of Spo04130.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C9Z3_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g116690 PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 7.700e-35
Identity = 93/188 (49.47%), Postives = 118/188 (62.77%), Query Frame = 1 

		  

Query: 1   MSNEERVIIEDDAESPSNPFIHRHRCCFQLPCFGSSPTSTTPRHITLGGGGANSSLSDPS 60
           +S  ++ I ++D       F  + RCC  +PCFGS P+           GG + S S PS
Sbjct: 32  VSGHQQNITDEDEALIMETFSSKARCCSFIPCFGSRPSPAR-------SGGFSGSSSSPS 91

Query: 61  TSFWDRFR-SAENEPRWWSQPFKAFKKIREWSEIVAGPKWKTFIRRINRRRPNHRHHHHQ 120
              W+R + +AE E +WW+ P K  KKIREWSEI+AGPKWKTFIRR NR    +      
Sbjct: 92  --MWERLQQTAEIENKWWAGPLKGLKKIREWSEIIAGPKWKTFIRRFNRGTGKNG----- 151

Query: 121 QQQSTGQFQYDPLSYALNFDEGPGQNGHFDEDYDAGNFPDFSSRFASAATPPPSSKSPAE 180
              ++G+FQYDPLSYALNFD+GPGQNG+F+ED   G FPDFSSRFAS    P SS++  +
Sbjct: 152 --AASGKFQYDPLSYALNFDDGPGQNGNFEED---GYFPDFSSRFASI---PLSSRTSMD 197

Query: 181 LG-NGAPA 187
           LG NG PA
Sbjct: 212 LGKNGIPA 197
[Close]
BLAST of Spo04130.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QHZ5_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_177190 PE=4 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 1.500e-33
Identity = 90/188 (47.87%), Postives = 114/188 (60.64%), Query Frame = 1 

		  

Query: 1   MSNEERVIIEDDAESPSNPFIHRHRCCFQLPCFGSSPTSTTPRHITLGGGGANSSLSDPS 60
           +S  ++ +I+++       F   + CC   PCFG  P+    R   LGG       S  S
Sbjct: 21  VSLHQQQVIDENEALIMESFSSNNSCCSFFPCFGGQPSPN--RSSGLGG-------STSS 80

Query: 61  TSFWDRFR-SAENEPRWWSQPFKAFKKIREWSEIVAGPKWKTFIRRINRRRPNHRHHHHQ 120
            S W+R + +AE E +WW+ P +  KK+REWSEI+AGPKWKTFIRR NR          +
Sbjct: 81  PSMWERLQQTAEIENKWWAGPLQGLKKMREWSEIIAGPKWKTFIRRFNRGG--------K 140

Query: 121 QQQSTGQFQYDPLSYALNFDEGPGQNGHFDEDYDAGNFPDFSSRFASAATPPPSSKSPAE 180
               +G+FQYDPLSYALNFD+GPGQNGH DED   G FPDFSSRFAS    P SS+S  +
Sbjct: 141 SATGSGKFQYDPLSYALNFDDGPGQNGHLDED---GYFPDFSSRFASI---PKSSRSSID 185

Query: 181 LG-NGAPA 187
           LG NG P+
Sbjct: 201 LGKNGIPS 185
[Close]
BLAST of Spo04130.1 vs. UniProtKB/TrEMBL
Match: A0A067K4Q7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11503 PE=4 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 3.700e-29
Identity = 77/156 (49.36%), Postives = 91/156 (58.33%), Query Frame = 1 

		  

Query: 14  ESPSNPFIHRHRCCFQLPCFGSSPTSTTPRHITLGGGGANSSLSDPSTSFWDRFRSAE-- 73
           +  SN  +   RCCF   CFGS  +S                       +W+R RS+   
Sbjct: 11  QQSSNSLLQNTRCCF---CFGSRRSSGV------------------GLVWWERIRSSRTH 70

Query: 74  -NEPRWWSQPFKAFKKIREWSEIVAGPKWKTFIRRINRRRPNHRHHHHQQQQSTGQFQYD 133
            ++  WWS   +A KKIREWSEIVAGP+WKTFIRR NRR   +  H        G+FQYD
Sbjct: 71  IDDKPWWSMGVRALKKIREWSEIVAGPRWKTFIRRFNRRGSGNSRH--------GKFQYD 130

Query: 134 PLSYALNFDEGPGQNGHFDEDYDAGNFPDFSSRFAS 167
           PLSYALNFDEGPGQNG+ DED D G F DFSSR+AS
Sbjct: 131 PLSYALNFDEGPGQNGNLDEDDDYGGFRDFSSRYAS 137
[Close]
BLAST of Spo04130.1 vs. TAIR (Arabidopsis)
Match: AT5G14890.1 (NHL domain-containing protein)

HSP 1 Score: 91.7 bits (226), Expect = 5.300e-19
Identity = 74/198 (37.37%), Postives = 94/198 (47.47%), Query Frame = 1 

		  

Query: 1   MSNEERVIIEDDAESPSNPFIHRHR-CCFQLPCFGSSPTSTTPRHITLGGGGANSSLSDP 60
           M  E   I E DA    +  +   R CCF LPC GSS  S           G N S+   
Sbjct: 584 MGLESFPISEMDATDEMHEAMFAKRGCCFILPCLGSSQPS-----------GPNGSV--- 643

Query: 61  STSFWDRFRSA---ENEPRWWSQPFKAFKKIREWSEIVAGPKWKTFIRRINR-------- 120
              +W R R+    E + RWW      + K+REWSEIVAGPKWKTFIRR  R        
Sbjct: 644 ---WWQRIRTVDKLEPDERWW---VSGWMKMREWSEIVAGPKWKTFIRRFGRNHCCNGGI 703

Query: 121 ----RRPNHRHHHHQQQQSTGQFQYDPLSYALNFDEGPGQNGHFDEDYDAGNFPDFSSRF 180
                RP H             F+YD  SY+LNFD+G  Q GHF++++    + D+S RF
Sbjct: 704 DGGCNRPEH-----------VSFRYDSWSYSLNFDDGK-QTGHFEDEFP---YRDYSMRF 745

Query: 181 ASAATPPPSSKSPAELGN 183
           A A + P S+K   +  N
Sbjct: 764 A-APSLPVSTKCSIDFDN 745
[Close]
BLAST of Spo04130.1 vs. TAIR (Arabidopsis)
Match: AT3G01430.1 (BEST Arabidopsis thaliana protein match is: NHL domain-containing protein (TAIR:AT5G14890.1))

HSP 1 Score: 91.7 bits (226), Expect = 5.300e-19
Identity = 65/195 (33.33%), Postives = 93/195 (47.69%), Query Frame = 1 

		  

Query: 1   MSNEERVIIEDDAESPSNPFIHRHR-CCFQLPCFGSSPTSTTPRHITLGGGGANSSLSDP 60
           MS++   I E DA    +  +   R CCF +PC  SS  ST        GG         
Sbjct: 1   MSHQSPPIAEVDATDDMHEALFAKRGCCFLMPCLASSQPSTR-------GGSV------- 60

Query: 61  STSFWDRFRSA---ENEPRWWSQPFKAFKKIREWSEIVAGPKWKTFIRRINRRR------ 120
              +W R  +    E + RWW    + ++++REWSE+VAGP+WKT+IRR  R        
Sbjct: 61  ---WWQRITTVDKLEPDERWW---IRGWRRMREWSELVAGPRWKTYIRRFGRSNCCGGGG 120

Query: 121 ---------------PNHRHHHHQQQQSTGQFQYDPLSYALNFDEGPGQNGHFDEDYDAG 171
                          PN       +    G+F+YD LSY+LNFD+G  Q GHFD+++   
Sbjct: 121 GRVGNSSGGCGGGAMPN-------RSSDQGKFRYDQLSYSLNFDDG-NQTGHFDDEFP-- 164
[Close]
BLAST of Spo04130.1 vs. TAIR (Arabidopsis)
Match: AT5G62865.1 (unknown protein)

HSP 1 Score: 86.7 bits (213), Expect = 1.700e-17
Identity = 66/162 (40.74%), Postives = 81/162 (50.00%), Query Frame = 1 

		  

Query: 26  CCFQLPCFGSSPTSTTPRHITLGGGGANSSLSDPSTSFWDRFRSAEN---------EPRW 85
           CCF  P F  S +ST   +                 S W R R+ ++         EPRW
Sbjct: 21  CCF--PSFRRSRSSTAVGY-----------------SSWGRIRTVDDSNHSGDHGDEPRW 80

Query: 86  WSQPFKAFKKIREWSEIVAGPKWKTFIRRINRRRPNHRHHHHQQQQSTGQFQYDPLSYAL 145
           W    +A  KIREWSEIVAGP+WKTFIRR NR     R        ++ +FQYDPLSY+L
Sbjct: 81  W---IRASLKIREWSEIVAGPRWKTFIRRFNRDPRRGR-----DWDASEKFQYDPLSYSL 140

Query: 146 NFDEGPGQNGHFDEDYDAGNFPDFSSRFASAATPPPSSKSPA 179
           NFD+   +    DE    G    FS+RFAS   P  S K+PA
Sbjct: 141 NFDDDDEE----DEYVGLGGLRSFSTRFAS--VPVYSGKAPA 149
[Close]
BLAST of Spo04130.1 vs. TAIR (Arabidopsis)
Match: AT3G48020.1 (unknown protein)

HSP 1 Score: 85.5 bits (210), Expect = 3.800e-17
Identity = 59/137 (43.07%), Postives = 77/137 (56.20%), Query Frame = 1 

		  

Query: 50  GGANSSLSDPS-------TSFWDRF-RSAENEPRWWSQPFKAFKKIREWSEIVAGPKWKT 109
           G AN  L + S       +S+W R  R+   EPRWW    +AF KIREWSEIVAGP+WKT
Sbjct: 4   GQANPLLGESSCCSTTVKSSWWQRIHRNNHQEPRWW---VRAFLKIREWSEIVAGPRWKT 63

Query: 110 FIRRINRRRPNHRHHHHQQQQSTGQFQYDPLSYALNFDEGPGQNGHFDEDYDAGNFPDFS 169
           FIRR NR          Q    + +F+YDP+SY L+F++   ++   D++   G    FS
Sbjct: 64  FIRRFNRDP-----RRGQDWDDSDKFRYDPVSYTLSFED---EDKDDDDEAGVGGVRSFS 123

Query: 170 SRFASAATPPPSSKSPA 179
            R+AS   P  S KSPA
Sbjct: 124 MRYAS--VPVASGKSPA 127
The following BLAST results are available for this feature:
BLAST of Spo04130.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902217405|gb|KNA17687.1|1.8e-106100.hypothetical protein SOVF_0776... [more]
gi|731335451|ref|XP_010678733.1|3.4e-6067.1PREDICTED: uncharacterized pro... [more]
gi|731335453|ref|XP_010678734.1|1.1e-3449.4PREDICTED: uncharacterized pro... [more]
gi|902163619|gb|KNA06855.1|2.1e-3347.8hypothetical protein SOVF_1771... [more]
gi|743849871|ref|XP_011028593.1|4.1e-2947.9PREDICTED: uncharacterized pro... [more]
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BLAST of Spo04130.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RFT5_SPIOL1.3e-106100.Uncharacterized protein OS=Spi... [more]
A0A0J8CEI5_BETVU2.4e-6067.1Uncharacterized protein OS=Bet... [more]
A0A0J8C9Z3_BETVU7.7e-3549.4Uncharacterized protein OS=Bet... [more]
A0A0K9QHZ5_SPIOL1.5e-3347.8Uncharacterized protein OS=Spi... [more]
A0A067K4Q7_JATCU3.7e-2949.3Uncharacterized protein OS=Jat... [more]
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BLAST of Spo04130.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo04130.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 4
Match NameE-valueIdentityDescription
AT5G14890.15.3e-1937.3NHL domain-containing protein[more]
AT3G01430.15.3e-1933.3BEST Arabidopsis thaliana prot... [more]
AT5G62865.11.7e-1740.7unknown protein[more]
AT3G48020.13.8e-1743.0unknown protein[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR13833FAMILY NOT NAMEDcoord: 68..164
score: 4.6

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0050832 defense response to fungus
biological_process GO:0009409 response to cold
biological_process GO:0071555 cell wall organization
biological_process GO:0006073 cellular glucan metabolic process
biological_process GO:0006096 glycolytic process
biological_process GO:0006094 gluconeogenesis
biological_process GO:0042732 D-xylose metabolic process
biological_process GO:0071805 potassium ion transmembrane transport
biological_process GO:0006508 proteolysis
biological_process GO:0002213 defense response to insect
biological_process GO:0006810 transport
biological_process GO:0009909 regulation of flower development
biological_process GO:0006468 protein phosphorylation
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0007623 circadian rhythm
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005622 intracellular
cellular_component GO:0016020 membrane
cellular_component GO:0005618 cell wall
cellular_component GO:0005829 cytosol
cellular_component GO:0048046 apoplast
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0000785 chromatin
cellular_component GO:0031410 cytoplasmic vesicle
cellular_component GO:0005634 nucleus
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0004190 aspartic-type endopeptidase activity
molecular_function GO:0030246 carbohydrate binding
molecular_function GO:0003677 DNA binding
molecular_function GO:0016762 xyloglucan:xyloglucosyl transferase activity
molecular_function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:1901363 heterocyclic compound binding
molecular_function GO:0097159 organic cyclic compound binding
molecular_function GO:0004034 aldose 1-epimerase activity
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0005215 transporter activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0004674 protein serine/threonine kinase activity
molecular_function GO:0015079 potassium ion transmembrane transporter activity
molecular_function GO:0003682 chromatin binding
molecular_function GO:0004672 protein kinase activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo176310.87Barchart | Table
Spo260860.86Barchart | Table
Spo158660.85Barchart | Table
Spo058420.84Barchart | Table
Spo238430.84Barchart | Table
Spo247690.84Barchart | Table
Spo198680.83Barchart | Table
Spo074840.81Barchart | Table
Spo243050.80Barchart | Table
Spo050460.80Barchart | Table
Spo134820.80Barchart | Table
Spo127120.79Barchart | Table
Spo238420.78Barchart | Table
Spo146820.78Barchart | Table
Spo216760.77Barchart | Table
Spo086830.77Barchart | Table
Spo107370.77Barchart | Table
Spo222680.76Barchart | Table
Spo018070.76Barchart | Table
Spo128490.75Barchart | Table
Spo100470.75Barchart | Table
Spo165870.75Barchart | Table
Spo041290.75Barchart | Table
Spo251290.75Barchart | Table
Spo207290.75Barchart | Table
Spo020910.75Barchart | Table
Spo260850.74Barchart | Table
Spo238360.74Barchart | Table
Spo205950.74Barchart | Table
Spo197880.74Barchart | Table
Spo179750.74Barchart | Table
Spo105670.74Barchart | Table
Spo215090.73Barchart | Table
Spo183830.73Barchart | Table
Spo251450.73Barchart | Table
Spo202920.73Barchart | Table
Spo083250.72Barchart | Table
Spo120250.72Barchart | Table
Spo131810.72Barchart | Table
Spo232380.72Barchart | Table
Spo161710.72Barchart | Table
Spo140970.71Barchart | Table
Spo077860.71Barchart | Table
Spo001720.71Barchart | Table
Spo035460.71Barchart | Table
Spo123580.71Barchart | Table
Spo016160.71Barchart | Table
Spo121450.71Barchart | Table
Spo173380.71Barchart | Table
Spo198880.71Barchart | Table
Spo220330.70Barchart | Table
Spo006110.70Barchart | Table
Spo075140.70Barchart | Table
Spo095570.70Barchart | Table
Spo104850.70Barchart | Table
Spo108260.70Barchart | Table
Spo109060.70Barchart | Table
Spo122180.70Barchart | Table
Spo259600.70Barchart | Table
Spo134070.69Barchart | Table
Spo083720.69Barchart | Table
Spo007820.69Barchart | Table
Spo142950.69Barchart | Table
Spo231720.69Barchart | Table
Spo157100.69Barchart | Table
Spo067840.69Barchart | Table
Spo177130.68Barchart | Table
Spo118250.68Barchart | Table
Spo097560.68Barchart | Table
Spo090600.68Barchart | Table
Spo189280.68Barchart | Table
Spo084190.68Barchart | Table
Spo080340.68Barchart | Table
Spo070770.68Barchart | Table
Spo064900.68Barchart | Table
Spo221170.68Barchart | Table
Spo237700.68Barchart | Table
Spo245160.68Barchart | Table
Spo010730.68Barchart | Table
Spo257870.68Barchart | Table
Spo188340.67Barchart | Table
Spo268990.67Barchart | Table
Spo133830.67Barchart | Table
Spo062620.67Barchart | Table
Spo117730.67Barchart | Table
Spo024060.67Barchart | Table
Spo024050.67Barchart | Table
Spo076460.67Barchart | Table
Spo259610.67Barchart | Table
Spo022520.67Barchart | Table
Spo139410.67Barchart | Table
Spo247900.67Barchart | Table
Spo123720.67Barchart | Table
Spo045830.67Barchart | Table
Spo229810.67Barchart | Table
Spo120290.67Barchart | Table
Spo205620.67Barchart | Table
Spo012350.66Barchart | Table
Spo271620.66Barchart | Table
Spo205650.66Barchart | Table
Spo260130.66Barchart | Table
Spo217120.66Barchart | Table
Spo217840.66Barchart | Table
Spo123390.66Barchart | Table
Spo035770.66Barchart | Table
Spo237790.66Barchart | Table
Spo238680.66Barchart | Table
Spo240600.66Barchart | Table
Spo266640.66Barchart | Table
Spo173230.66Barchart | Table
Spo106530.66Barchart | Table
Spo170020.65Barchart | Table
Spo197510.65Barchart | Table
Spo001240.65Barchart | Table
Spo103600.65Barchart | Table
Spo004140.65Barchart | Table
Spo161900.65Barchart | Table
Spo237040.65Barchart | Table
Spo232480.65Barchart | Table
Spo253200.65Barchart | Table
Spo013410.65Barchart | Table
Spo024440.65Barchart | Table