Spo04123 (gene)

Overview
NameSpo04123
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
LocationSpoScf_00523 : 68563 .. 68937 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAATAAATGAGGGGACGAAAGGAGGCAGGGGAGGGAGTAAAGCGGGTGTAAGTCTAAAAGACATGAAGTCAAATATCAGGCACTTCCATGTGCTCACATGGTTGACGAACTCTGAAAGTGGAGAGAGAAACAGAAACAGAAACAGAAACTAACCACAGCTCTCAATCAAACCCAACCCCAACTACACCTTAATCATAATCAATTCTATTCTCTCATTTATTCAATTATTCTACACCCTCTCAATTTTTCATCATTTTCCCAATTCATTTCTTTCTAAACTTCAAACTCAGCACCAGAAATCAGAGTTACCCACAAATACCCAGAACCTAAATCACCAGAAAAGCTTCAAACTTTTACTGTTTTTGGCTTAA

mRNA sequence

ATGGCAATAAATGAGGGGACGAAAGGAGGCAGGGGAGGGAGTAAAGCGGGTGTAAGTCTAAAAGACATGAAGTCAAATATCAGGCACTTCCATCTCTCAATCAAACCCAACCCCAACTACACCTTAATCATAATCAATTCTATTCTCTCATTTATTCAATTATTCTACACCCTCTCAATTTTTCATCATTTTCCCAATTCATTTCTTTCTAAACTTCAAACTCAGCACCAGAAATCAGAGTTACCCACAAATACCCAGAACCTAAATCACCAGAAAAGCTTCAAACTTTTACTGTTTTTGGCTTAA

Coding sequence (CDS)

ATGGCAATAAATGAGGGGACGAAAGGAGGCAGGGGAGGGAGTAAAGCGGGTGTAAGTCTAAAAGACATGAAGTCAAATATCAGGCACTTCCATCTCTCAATCAAACCCAACCCCAACTACACCTTAATCATAATCAATTCTATTCTCTCATTTATTCAATTATTCTACACCCTCTCAATTTTTCATCATTTTCCCAATTCATTTCTTTCTAAACTTCAAACTCAGCACCAGAAATCAGAGTTACCCACAAATACCCAGAACCTAAATCACCAGAAAAGCTTCAAACTTTTACTGTTTTTGGCTTAA

Protein sequence

MAINEGTKGGRGGSKAGVSLKDMKSNIRHFHLSIKPNPNYTLIIINSILSFIQLFYTLSIFHHFPNSFLSKLQTQHQKSELPTNTQNLNHQKSFKLLLFLA
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo04123.1Spo04123.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo04123.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo04123.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo04123.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo04123.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006855 drug transmembrane transport
biological_process GO:0044260 cellular macromolecule metabolic process
biological_process GO:0030007 cellular potassium ion homeostasis
biological_process GO:0019761 glucosinolate biosynthetic process
biological_process GO:0006888 ER to Golgi vesicle-mediated transport
biological_process GO:0008152 metabolic process
biological_process GO:0000226 microtubule cytoskeleton organization
biological_process GO:0009651 response to salt stress
biological_process GO:0007165 signal transduction
biological_process GO:0035265 organ growth
biological_process GO:0032984 protein-containing complex disassembly
biological_process GO:0005975 carbohydrate metabolic process
biological_process GO:0044262 cellular carbohydrate metabolic process
biological_process GO:0044085 cellular component biogenesis
biological_process GO:0016043 cellular component organization
biological_process GO:0009987 cellular process
biological_process GO:0006457 protein folding
biological_process GO:0006139 nucleobase-containing compound metabolic process
biological_process GO:0015995 chlorophyll biosynthetic process
biological_process GO:0009902 chloroplast relocation
biological_process GO:0042742 defense response to bacterium
biological_process GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0009773 photosynthetic electron transport in photosystem I
biological_process GO:0042793 plastid transcription
biological_process GO:0006364 rRNA processing
biological_process GO:0010027 thylakoid membrane organization
biological_process GO:0045454 cell redox homeostasis
biological_process GO:0006662 glycerol ether metabolic process
biological_process GO:0006979 response to oxidative stress
biological_process GO:0009414 response to water deprivation
biological_process GO:0043090 amino acid import
biological_process GO:0000911 cytokinesis by cell plate formation
biological_process GO:0009658 chloroplast organization
biological_process GO:0009231 riboflavin biosynthetic process
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0006952 defense response
biological_process GO:0010207 photosystem II assembly
biological_process GO:0009963 positive regulation of flavonoid biosynthetic process
biological_process GO:0006612 protein targeting to membrane
biological_process GO:0016556 mRNA modification
biological_process GO:0010363 regulation of plant-type hypersensitive response
biological_process GO:0042908 xenobiotic transport
biological_process GO:0006508 proteolysis
biological_process GO:0006468 protein phosphorylation
biological_process GO:0019252 starch biosynthetic process
biological_process GO:0000023 maltose metabolic process
cellular_component GO:0005840 ribosome
cellular_component GO:0005634 nucleus
cellular_component GO:0009507 chloroplast
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0009523 photosystem II
cellular_component GO:0009534 chloroplast thylakoid
cellular_component GO:0044434 chloroplast part
cellular_component GO:0009349 riboflavin synthase complex
cellular_component GO:0005789 endoplasmic reticulum membrane
cellular_component GO:0005739 mitochondrion
cellular_component GO:0016020 membrane
cellular_component GO:0005774 vacuolar membrane
cellular_component GO:0000325 plant-type vacuole
molecular_function GO:0009055 electron transfer activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003756 protein disulfide isomerase activity
molecular_function GO:0043621 protein self-association
molecular_function GO:0004672 protein kinase activity
molecular_function GO:0004222 metalloendopeptidase activity
molecular_function GO:0003723 RNA binding
molecular_function GO:0008233 peptidase activity
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0008559 xenobiotic transmembrane transporting ATPase activity
molecular_function GO:0008281 sulfonylurea receptor activity
molecular_function GO:0005515 protein binding
molecular_function GO:0005525 GTP binding
molecular_function GO:0004746 riboflavin synthase activity
molecular_function GO:0005509 calcium ion binding
molecular_function GO:0015035 protein disulfide oxidoreductase activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo084070.82Barchart | Table
Spo096250.76Barchart | Table
Spo066370.76Barchart | Table
Spo126820.75Barchart | Table
Spo153170.75Barchart | Table
Spo188440.75Barchart | Table
Spo116880.74Barchart | Table
Spo234150.74Barchart | Table
Spo011350.74Barchart | Table
Spo116300.74Barchart | Table
Spo084780.73Barchart | Table
Spo108350.73Barchart | Table
Spo251960.73Barchart | Table
Spo012520.73Barchart | Table
Spo019280.73Barchart | Table
Spo219560.73Barchart | Table
Spo029180.73Barchart | Table
Spo259850.73Barchart | Table
Spo092320.72Barchart | Table
Spo243240.72Barchart | Table
Spo152150.72Barchart | Table
Spo139810.72Barchart | Table
Spo100920.72Barchart | Table
Spo120050.72Barchart | Table
Spo250080.72Barchart | Table
Spo273640.72Barchart | Table
Spo233270.71Barchart | Table
Spo211440.71Barchart | Table
Spo258040.71Barchart | Table
Spo095540.71Barchart | Table
Spo002560.71Barchart | Table
Spo175770.71Barchart | Table
Spo036380.71Barchart | Table
Spo042000.71Barchart | Table
Spo159950.71Barchart | Table
Spo244250.71Barchart | Table
Spo002140.70Barchart | Table
Spo005390.70Barchart | Table
Spo016280.70Barchart | Table
Spo026490.70Barchart | Table
Spo056530.70Barchart | Table
Spo069530.70Barchart | Table
Spo123320.70Barchart | Table
Spo126090.70Barchart | Table
Spo146300.70Barchart | Table
Spo233320.70Barchart | Table
Spo236260.70Barchart | Table
Spo238000.70Barchart | Table
Spo259870.70Barchart | Table
Spo266100.70Barchart | Table
Spo266970.69Barchart | Table
Spo118600.69Barchart | Table
Spo150790.69Barchart | Table
Spo050120.69Barchart | Table
Spo249130.69Barchart | Table
Spo047190.69Barchart | Table
Spo044250.69Barchart | Table
Spo169300.69Barchart | Table
Spo170380.69Barchart | Table
Spo177400.69Barchart | Table
Spo271360.69Barchart | Table
Spo269750.68Barchart | Table
Spo172180.68Barchart | Table
Spo033620.68Barchart | Table
Spo089350.68Barchart | Table
Spo158900.68Barchart | Table
Spo244300.68Barchart | Table
Spo161880.68Barchart | Table
Spo168010.68Barchart | Table
Spo059150.68Barchart | Table
Spo194310.68Barchart | Table
Spo230350.68Barchart | Table
Spo213610.68Barchart | Table
Spo026960.68Barchart | Table
Spo266880.68Barchart | Table
Spo259830.68Barchart | Table
Spo061700.68Barchart | Table
Spo148300.68Barchart | Table
Spo149140.68Barchart | Table
Spo075480.67Barchart | Table
Spo129650.67Barchart | Table
Spo008770.67Barchart | Table
Spo180800.67Barchart | Table
Spo181840.67Barchart | Table
Spo193410.67Barchart | Table
Spo201060.67Barchart | Table
Spo220040.67Barchart | Table
Spo023960.67Barchart | Table
Spo016030.67Barchart | Table
Spo010140.67Barchart | Table
Spo009660.67Barchart | Table
Spo097980.67Barchart | Table
Spo086540.67Barchart | Table
Spo076330.67Barchart | Table
Spo264230.66Barchart | Table
Spo010540.66Barchart | Table
Spo053070.66Barchart | Table
Spo119290.66Barchart | Table
Spo199380.66Barchart | Table
Spo194570.66Barchart | Table
Spo026650.66Barchart | Table
Spo093870.66Barchart | Table
Spo194420.66Barchart | Table
Spo021060.66Barchart | Table
Spo029790.66Barchart | Table
Spo238530.66Barchart | Table
Spo012810.66Barchart | Table
Spo178600.66Barchart | Table
Spo152660.66Barchart | Table
Spo011320.66Barchart | Table
Spo192880.65Barchart | Table
Spo085910.65Barchart | Table
Spo235580.65Barchart | Table
Spo211550.65Barchart | Table
Spo181040.65Barchart | Table
Spo231540.65Barchart | Table
Spo088110.65Barchart | Table
Spo232570.65Barchart | Table