Spo03906 (gene)

Overview
NameSpo03906
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionBnaA06g02540D protein
Locationchr1 : 46901472 .. 46902329 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTTGACTTTGACTTTCCTCAAGATAAGGCATCCAACAATCTAACATTATCCACACTTCCAACACAAAGTTTATCACTCTTTGATTTCTTTAGTTCATCATTCATGGCTTCTTTTCTTGGCCACAACTCTTTACAAACATTCCTCAAATCATCCAACATCCTATTCTCCCAAAAGCCCAAAACCTTAATCACCTATGCATCATCATCATCATTCCCAGCAAGAGACAAAATCATAGACTTTGGTAAATTCAAAGGAAGAATGCTAGGAACTCTACCTTCAACCTACCTAAAATGGGTGTCCAACAATCTCAGAGCAAGGGACTTTGAAGAGTGGGCTAAGTTAGCTGATCAAGTACTCGAAGACCATGTATACAAAGACCGTATAGAGTGGGAGTATGCTGAAAAGCTTCTCAATGGAGATGTCTTAACCGCTAATTCTAAGTCTGAAGGTGTGGTTGCTGAACTGCTTGATATAAGTCAGAGGTTTGGGTGGGATAATGATGATAAAGTTGGGTGGAGTAAGATTGATTATCAGCTTCTTGGAACCTCTAAAGGGAAGAGGATACCAAGGTTGAAGGAGAGGAATGATGGAGAGTTGCAGAATTTGAAGAGAGAAAAAGCTGACAGGAGTAGAGAGGTTGGTGTGAGGGATAAGAGAGTTGAGAGAAGAGAGAGGTTGAGGATTCAGAGAGGGTTGTTAAGCATGAATAATGATCATAATAATAGGTTTAACAATGTGGTTAAGGAAGGAGATGTGGGAAAAGAGAGTTCTGATCAAAATGCAGGGGTTTACAGTCCATTTCCTGGAAGAGAAACACTCCTAAGAAATGCTCTTAATCGGCGAAGAATTGTTTAG

mRNA sequence

ATGCTTGACTTTGACTTTCCTCAAGATAAGGCATCCAACAATCTAACATTATCCACACTTCCAACACAAAGTTTATCACTCTTTGATTTCTTTAGTTCATCATTCATGGCTTCTTTTCTTGGCCACAACTCTTTACAAACATTCCTCAAATCATCCAACATCCTATTCTCCCAAAAGCCCAAAACCTTAATCACCTATGCATCATCATCATCATTCCCAGCAAGAGACAAAATCATAGACTTTGGTAAATTCAAAGGAAGAATGCTAGGAACTCTACCTTCAACCTACCTAAAATGGGTGTCCAACAATCTCAGAGCAAGGGACTTTGAAGAGTGGGCTAAGTTAGCTGATCAAGTACTCGAAGACCATGTATACAAAGACCGTATAGAGTGGGAGTATGCTGAAAAGCTTCTCAATGGAGATGTCTTAACCGCTAATTCTAAGTCTGAAGGTGTGGTTGCTGAACTGCTTGATATAAGTCAGAGGTTTGGGTGGGATAATGATGATAAAGTTGGGTGGAGTAAGATTGATTATCAGCTTCTTGGAACCTCTAAAGGGAAGAGGATACCAAGGTTGAAGGAGAGGAATGATGGAGAGTTGCAGAATTTGAAGAGAGAAAAAGCTGACAGGAGTAGAGAGGTTGGTGTGAGGGATAAGAGAGTTGAGAGAAGAGAGAGGTTGAGGATTCAGAGAGGGTTGTTAAGCATGAATAATGATCATAATAATAGGTTTAACAATGTGGTTAAGGAAGGAGATGTGGGAAAAGAGAGTTCTGATCAAAATGCAGGGGTTTACAGTCCATTTCCTGGAAGAGAAACACTCCTAAGAAATGCTCTTAATCGGCGAAGAATTGTTTAG

Coding sequence (CDS)

ATGCTTGACTTTGACTTTCCTCAAGATAAGGCATCCAACAATCTAACATTATCCACACTTCCAACACAAAGTTTATCACTCTTTGATTTCTTTAGTTCATCATTCATGGCTTCTTTTCTTGGCCACAACTCTTTACAAACATTCCTCAAATCATCCAACATCCTATTCTCCCAAAAGCCCAAAACCTTAATCACCTATGCATCATCATCATCATTCCCAGCAAGAGACAAAATCATAGACTTTGGTAAATTCAAAGGAAGAATGCTAGGAACTCTACCTTCAACCTACCTAAAATGGGTGTCCAACAATCTCAGAGCAAGGGACTTTGAAGAGTGGGCTAAGTTAGCTGATCAAGTACTCGAAGACCATGTATACAAAGACCGTATAGAGTGGGAGTATGCTGAAAAGCTTCTCAATGGAGATGTCTTAACCGCTAATTCTAAGTCTGAAGGTGTGGTTGCTGAACTGCTTGATATAAGTCAGAGGTTTGGGTGGGATAATGATGATAAAGTTGGGTGGAGTAAGATTGATTATCAGCTTCTTGGAACCTCTAAAGGGAAGAGGATACCAAGGTTGAAGGAGAGGAATGATGGAGAGTTGCAGAATTTGAAGAGAGAAAAAGCTGACAGGAGTAGAGAGGTTGGTGTGAGGGATAAGAGAGTTGAGAGAAGAGAGAGGTTGAGGATTCAGAGAGGGTTGTTAAGCATGAATAATGATCATAATAATAGGTTTAACAATGTGGTTAAGGAAGGAGATGTGGGAAAAGAGAGTTCTGATCAAAATGCAGGGGTTTACAGTCCATTTCCTGGAAGAGAAACACTCCTAAGAAATGCTCTTAATCGGCGAAGAATTGTTTAG

Protein sequence

MLDFDFPQDKASNNLTLSTLPTQSLSLFDFFSSSFMASFLGHNSLQTFLKSSNILFSQKPKTLITYASSSSFPARDKIIDFGKFKGRMLGTLPSTYLKWVSNNLRARDFEEWAKLADQVLEDHVYKDRIEWEYAEKLLNGDVLTANSKSEGVVAELLDISQRFGWDNDDKVGWSKIDYQLLGTSKGKRIPRLKERNDGELQNLKREKADRSREVGVRDKRVERRERLRIQRGLLSMNNDHNNRFNNVVKEGDVGKESSDQNAGVYSPFPGRETLLRNALNRRRIV
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo03906.1Spo03906.1mRNA


Homology
[Close]
BLAST of Spo03906.1 vs. NCBI nr
Match: gi|902201202|gb|KNA13934.1| (hypothetical protein SOVF_112070 [Spinacia oleracea])

HSP 1 Score: 491.5 bits (1264), Expect = 9.900e-136
Identity = 250/250 (100.00%), Postives = 250/250 (100.00%), Query Frame = 1 

		  

Query: 36  MASFLGHNSLQTFLKSSNILFSQKPKTLITYASSSSFPARDKIIDFGKFKGRMLGTLPST 95
           MASFLGHNSLQTFLKSSNILFSQKPKTLITYASSSSFPARDKIIDFGKFKGRMLGTLPST
Sbjct: 1   MASFLGHNSLQTFLKSSNILFSQKPKTLITYASSSSFPARDKIIDFGKFKGRMLGTLPST 60

Query: 96  YLKWVSNNLRARDFEEWAKLADQVLEDHVYKDRIEWEYAEKLLNGDVLTANSKSEGVVAE 155
           YLKWVSNNLRARDFEEWAKLADQVLEDHVYKDRIEWEYAEKLLNGDVLTANSKSEGVVAE
Sbjct: 61  YLKWVSNNLRARDFEEWAKLADQVLEDHVYKDRIEWEYAEKLLNGDVLTANSKSEGVVAE 120

Query: 156 LLDISQRFGWDNDDKVGWSKIDYQLLGTSKGKRIPRLKERNDGELQNLKREKADRSREVG 215
           LLDISQRFGWDNDDKVGWSKIDYQLLGTSKGKRIPRLKERNDGELQNLKREKADRSREVG
Sbjct: 121 LLDISQRFGWDNDDKVGWSKIDYQLLGTSKGKRIPRLKERNDGELQNLKREKADRSREVG 180

Query: 216 VRDKRVERRERLRIQRGLLSMNNDHNNRFNNVVKEGDVGKESSDQNAGVYSPFPGRETLL 275
           VRDKRVERRERLRIQRGLLSMNNDHNNRFNNVVKEGDVGKESSDQNAGVYSPFPGRETLL
Sbjct: 181 VRDKRVERRERLRIQRGLLSMNNDHNNRFNNVVKEGDVGKESSDQNAGVYSPFPGRETLL 240

Query: 276 RNALNRRRIV 286
           RNALNRRRIV
Sbjct: 241 RNALNRRRIV 250
[Close]
BLAST of Spo03906.1 vs. NCBI nr
Match: gi|731365369|ref|XP_010694488.1| (PREDICTED: uncharacterized protein LOC104907276 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 323.6 bits (828), Expect = 3.600e-85
Identity = 179/269 (66.54%), Postives = 209/269 (77.70%), Query Frame = 1 

		  

Query: 36  MASFLGHNSLQTFLKSSNILFSQKPKTLITYASSSSFPARDKIIDFGKFKGRMLGTLPST 95
           M SFLG+NSL TFL SS +  SQ  K L    + +S PARDK IDFGK+KGRMLGTLPST
Sbjct: 1   MTSFLGNNSLHTFLSSSKLPNSQNSKCLRYKVTYASLPARDKTIDFGKYKGRMLGTLPST 60

Query: 96  YLKWVSNNLRARDFEEWAKLADQVLEDHVYKDRIEWEYAEKLLNGDVLTANSKSEGVVAE 155
           YLKWVS+NLRARDFEEWAKLADQVLED VYKDR+EWE A+KLLNGDVL  NSK EGVVAE
Sbjct: 61  YLKWVSSNLRARDFEEWAKLADQVLEDPVYKDRMEWESAQKLLNGDVLNVNSKPEGVVAE 120

Query: 156 LLDISQRFGWDNDDKVGWSKIDYQLLGTSKGKRIPRLKERNDGELQNLKR---EKADRSR 215
           LL++SQRFGWDN+DKVGWSKID+QLLGTSKG RIPR+KE+   EL ++KR   E+ +R R
Sbjct: 121 LLEVSQRFGWDNEDKVGWSKIDFQLLGTSKGGRIPRVKEKRGEELASMKRVEVEERERWR 180

Query: 216 E---------VGVRDKRVERRERLRIQRGLLSMNNDHNNRFNNVVKEGDVG------KES 275
           +         VGVR++R ERR+RLR++RG+L+MN   NNRF+N V+E   G      KES
Sbjct: 181 DERSEGGSGKVGVRERRDERRDRLRMKRGMLNMNK--NNRFSNAVEEEYQGNKYRRNKES 240

Query: 276 SDQN-AGVYSPFPGRETLLRNALNRRRIV 286
           SD N A VY+PFPGRETLL   LNRRR+V
Sbjct: 241 SDSNGAEVYNPFPGRETLLNKVLNRRRVV 267
[Close]
BLAST of Spo03906.1 vs. NCBI nr
Match: gi|661897728|emb|CDO99440.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 218.8 bits (556), Expect = 1.200e-53
Identity = 119/234 (50.85%), Postives = 162/234 (69.23%), Query Frame = 1 

		  

Query: 70  SSFPARDKIIDFGKFKGRMLGTLPSTYLKWVSNNLRARDFEEWAKLADQVLEDHVYKDRI 129
           ++ PARD++IDFGK+KG+M+G+LPS YLKWVS NLRARDFEEWAKLAD+VLED VYKDRI
Sbjct: 31  NAIPARDRVIDFGKYKGKMVGSLPSNYLKWVSKNLRARDFEEWAKLADEVLEDPVYKDRI 90

Query: 130 EWEYAEKLLNGDVLTANS---KSEGVVAELLDISQRFGWDNDDKVGWSKIDYQLLGTSKG 189
           EWE+A+K+LNGDVL++ S   + +  V+ L++IS+RFGWDN+DK+GW+K+D++LLGTSKG
Sbjct: 91  EWEFAQKVLNGDVLSSKSVQLQQKSAVSGLVEISERFGWDNEDKLGWAKVDFRLLGTSKG 150

Query: 190 KRIPRLKE-----RNDGELQNLKREKADRSREVGVRDKRVERRERLRIQRGLLSMNN--- 249
            RIPR+ +       DG L+ +K +  +      V+ +R ERRERL+++R      N   
Sbjct: 151 GRIPRVSDSGPRVMRDGGLEIVKPKAGESG---PVKGRRKERRERLKLRRRKNGERNGIK 210

Query: 250 -DHNNRFNNVVK---EGDVGKESSDQNAGVY-----SPFPGRETLLRNALNRRR 284
            D    F N  K   +GD  +   D+   +      S FPGRE  L+ A+NRRR
Sbjct: 211 VDDKGNFGNSSKNKLDGDQEEVDEDRRVDIIKTKSSSVFPGREAFLKKAVNRRR 261
[Close]
BLAST of Spo03906.1 vs. NCBI nr
Match: gi|460369099|ref|XP_004230401.1| (PREDICTED: uncharacterized protein LOC101252228 [Solanum lycopersicum])

HSP 1 Score: 218.0 bits (554), Expect = 2.100e-53
Identity = 124/250 (49.60%), Postives = 169/250 (67.60%), Query Frame = 1 

		  

Query: 52  SNILFSQKPKTLITYASSSSFPARDKIIDFGKFKGRMLGTLPSTYLKWVSNNLRARDFEE 111
           S  L  ++  T +   S    PARD++IDFGK+KG+MLGTLPS YLKWV+ NLRARDFEE
Sbjct: 25  SQSLSLRRSITPLAIVSRKVIPARDRVIDFGKYKGKMLGTLPSKYLKWVTKNLRARDFEE 84

Query: 112 WAKLADQVLEDHVYKDRIEWEYAEKLLNGDVLTANSKSEGVVAELLDISQRFGWDNDDKV 171
           WA+LADQVL D +Y+DRIEWE+A+ LLNGDV  A ++S   V+ELL+IS RF WDN+DK+
Sbjct: 85  WAQLADQVLSDPIYRDRIEWEFAQNLLNGDVSPARTQSS--VSELLEISTRFRWDNEDKL 144

Query: 172 GWSKIDYQLLGTSKGKRIPRLKERNDGELQNLKREK----ADRSREVGVRDKRVERRERL 231
           GWSKID++LLGTSKG RIPRL +  +  ++   ++K     D S++ G +D R  RRER+
Sbjct: 145 GWSKIDFELLGTSKGGRIPRLSDSPNNSIRVEDKKKGTDGVDSSQDDGEKDNRERRRERI 204

Query: 232 RIQR-----GLLS-------MNNDHNNRFNNVVKEGDVGKESSDQNAG---VYSPFPGRE 283
           ++QR     G  S        N+DH     N +K   +G  +++ ++G     S FPGRE
Sbjct: 205 KLQRRPNESGQRSTSVTQRRANSDH----FNPLKSDPIGATNNNTSSGRTETPSRFPGRE 264
[Close]
BLAST of Spo03906.1 vs. NCBI nr
Match: gi|697154817|ref|XP_009631645.1| (PREDICTED: uncharacterized protein LOC104121375 [Nicotiana tomentosiformis])

HSP 1 Score: 217.2 bits (552), Expect = 3.600e-53
Identity = 139/300 (46.33%), Postives = 182/300 (60.67%), Query Frame = 1 

		  

Query: 2   LDFDFPQDKASNNLTL---STLPTQSLSLFDFFSSSFMASFLGHNSLQTFLKSSNILFSQ 61
           LDF F  + + +++ L     +P  SL++     S F        S  +F  SS  L  +
Sbjct: 18  LDFFFNSNISHSDMNLLHFHPIPQCSLNVSSPTISRFQVG-----SYSSFPPSSQSLSLR 77

Query: 62  KPKTLITYASSS------SFPARDKIIDFGKFKGRMLGTLPSTYLKWVSNNLRARDFEEW 121
           +  +  T ++ S        PARD++IDFGK+KG+MLGTLPS YLKWVS NLRARDFEEW
Sbjct: 78  RNISSFTISAGSRATGPRQIPARDRVIDFGKYKGKMLGTLPSKYLKWVSKNLRARDFEEW 137

Query: 122 AKLADQVLEDHVYKDRIEWEYAEKLLNGDVLTANSKSEGVVAELLDISQRFGWDNDDKVG 181
           AKLAD+VL D VYKDRIEWE+A+ LLNGDV   ++ ++  V+ELL+IS RFGWDN+DK+G
Sbjct: 138 AKLADEVLSDSVYKDRIEWEFAQNLLNGDV---SASTQSAVSELLEISTRFGWDNEDKLG 197

Query: 182 WSKIDYQLLGTSKGKRIPRL--KERNDGELQNLKREKADRSREV--GVRDKRVERRERLR 241
           WSKIDY+LLGTSKG RIPRL     N+  L+ +    + +  E   G +D R  RRER+R
Sbjct: 198 WSKIDYELLGTSKGGRIPRLSYSPNNNTNLKGIAEVDSSQEEETGKGEKDSRERRRERIR 257

Query: 242 IQR-----GLLSMNNDHNNRFNNVVKEGD---VGKESSDQNAGVYSPFPGRETLLRNALN 281
           +QR     G  S   +      N     D   + K+ S  N G  S FPGRE LL+ AL+
Sbjct: 258 LQRRKNDSGSPSTMTERTRNLQNPENHTDYNTINKDHSVSNTG--SRFPGREALLKAALS 307
[Close]
BLAST of Spo03906.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R4R3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_112070 PE=4 SV=1)

HSP 1 Score: 491.5 bits (1264), Expect = 6.900e-136
Identity = 250/250 (100.00%), Postives = 250/250 (100.00%), Query Frame = 1 

		  

Query: 36  MASFLGHNSLQTFLKSSNILFSQKPKTLITYASSSSFPARDKIIDFGKFKGRMLGTLPST 95
           MASFLGHNSLQTFLKSSNILFSQKPKTLITYASSSSFPARDKIIDFGKFKGRMLGTLPST
Sbjct: 1   MASFLGHNSLQTFLKSSNILFSQKPKTLITYASSSSFPARDKIIDFGKFKGRMLGTLPST 60

Query: 96  YLKWVSNNLRARDFEEWAKLADQVLEDHVYKDRIEWEYAEKLLNGDVLTANSKSEGVVAE 155
           YLKWVSNNLRARDFEEWAKLADQVLEDHVYKDRIEWEYAEKLLNGDVLTANSKSEGVVAE
Sbjct: 61  YLKWVSNNLRARDFEEWAKLADQVLEDHVYKDRIEWEYAEKLLNGDVLTANSKSEGVVAE 120

Query: 156 LLDISQRFGWDNDDKVGWSKIDYQLLGTSKGKRIPRLKERNDGELQNLKREKADRSREVG 215
           LLDISQRFGWDNDDKVGWSKIDYQLLGTSKGKRIPRLKERNDGELQNLKREKADRSREVG
Sbjct: 121 LLDISQRFGWDNDDKVGWSKIDYQLLGTSKGKRIPRLKERNDGELQNLKREKADRSREVG 180

Query: 216 VRDKRVERRERLRIQRGLLSMNNDHNNRFNNVVKEGDVGKESSDQNAGVYSPFPGRETLL 275
           VRDKRVERRERLRIQRGLLSMNNDHNNRFNNVVKEGDVGKESSDQNAGVYSPFPGRETLL
Sbjct: 181 VRDKRVERRERLRIQRGLLSMNNDHNNRFNNVVKEGDVGKESSDQNAGVYSPFPGRETLL 240

Query: 276 RNALNRRRIV 286
           RNALNRRRIV
Sbjct: 241 RNALNRRRIV 250
[Close]
BLAST of Spo03906.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BE33_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g093470 PE=4 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 2.500e-85
Identity = 179/269 (66.54%), Postives = 209/269 (77.70%), Query Frame = 1 

		  

Query: 36  MASFLGHNSLQTFLKSSNILFSQKPKTLITYASSSSFPARDKIIDFGKFKGRMLGTLPST 95
           M SFLG+NSL TFL SS +  SQ  K L    + +S PARDK IDFGK+KGRMLGTLPST
Sbjct: 1   MTSFLGNNSLHTFLSSSKLPNSQNSKCLRYKVTYASLPARDKTIDFGKYKGRMLGTLPST 60

Query: 96  YLKWVSNNLRARDFEEWAKLADQVLEDHVYKDRIEWEYAEKLLNGDVLTANSKSEGVVAE 155
           YLKWVS+NLRARDFEEWAKLADQVLED VYKDR+EWE A+KLLNGDVL  NSK EGVVAE
Sbjct: 61  YLKWVSSNLRARDFEEWAKLADQVLEDPVYKDRMEWESAQKLLNGDVLNVNSKPEGVVAE 120

Query: 156 LLDISQRFGWDNDDKVGWSKIDYQLLGTSKGKRIPRLKERNDGELQNLKR---EKADRSR 215
           LL++SQRFGWDN+DKVGWSKID+QLLGTSKG RIPR+KE+   EL ++KR   E+ +R R
Sbjct: 121 LLEVSQRFGWDNEDKVGWSKIDFQLLGTSKGGRIPRVKEKRGEELASMKRVEVEERERWR 180

Query: 216 E---------VGVRDKRVERRERLRIQRGLLSMNNDHNNRFNNVVKEGDVG------KES 275
           +         VGVR++R ERR+RLR++RG+L+MN   NNRF+N V+E   G      KES
Sbjct: 181 DERSEGGSGKVGVRERRDERRDRLRMKRGMLNMNK--NNRFSNAVEEEYQGNKYRRNKES 240

Query: 276 SDQN-AGVYSPFPGRETLLRNALNRRRIV 286
           SD N A VY+PFPGRETLL   LNRRR+V
Sbjct: 241 SDSNGAEVYNPFPGRETLLNKVLNRRRVV 267
[Close]
BLAST of Spo03906.1 vs. UniProtKB/TrEMBL
Match: A0A068TT13_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00026614001 PE=4 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 8.700e-54
Identity = 119/234 (50.85%), Postives = 162/234 (69.23%), Query Frame = 1 

		  

Query: 70  SSFPARDKIIDFGKFKGRMLGTLPSTYLKWVSNNLRARDFEEWAKLADQVLEDHVYKDRI 129
           ++ PARD++IDFGK+KG+M+G+LPS YLKWVS NLRARDFEEWAKLAD+VLED VYKDRI
Sbjct: 31  NAIPARDRVIDFGKYKGKMVGSLPSNYLKWVSKNLRARDFEEWAKLADEVLEDPVYKDRI 90

Query: 130 EWEYAEKLLNGDVLTANS---KSEGVVAELLDISQRFGWDNDDKVGWSKIDYQLLGTSKG 189
           EWE+A+K+LNGDVL++ S   + +  V+ L++IS+RFGWDN+DK+GW+K+D++LLGTSKG
Sbjct: 91  EWEFAQKVLNGDVLSSKSVQLQQKSAVSGLVEISERFGWDNEDKLGWAKVDFRLLGTSKG 150

Query: 190 KRIPRLKE-----RNDGELQNLKREKADRSREVGVRDKRVERRERLRIQRGLLSMNN--- 249
            RIPR+ +       DG L+ +K +  +      V+ +R ERRERL+++R      N   
Sbjct: 151 GRIPRVSDSGPRVMRDGGLEIVKPKAGESG---PVKGRRKERRERLKLRRRKNGERNGIK 210

Query: 250 -DHNNRFNNVVK---EGDVGKESSDQNAGVY-----SPFPGRETLLRNALNRRR 284
            D    F N  K   +GD  +   D+   +      S FPGRE  L+ A+NRRR
Sbjct: 211 VDDKGNFGNSSKNKLDGDQEEVDEDRRVDIIKTKSSSVFPGREAFLKKAVNRRR 261
[Close]
BLAST of Spo03906.1 vs. UniProtKB/TrEMBL
Match: K4B1L2_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 1.500e-53
Identity = 124/250 (49.60%), Postives = 169/250 (67.60%), Query Frame = 1 

		  

Query: 52  SNILFSQKPKTLITYASSSSFPARDKIIDFGKFKGRMLGTLPSTYLKWVSNNLRARDFEE 111
           S  L  ++  T +   S    PARD++IDFGK+KG+MLGTLPS YLKWV+ NLRARDFEE
Sbjct: 25  SQSLSLRRSITPLAIVSRKVIPARDRVIDFGKYKGKMLGTLPSKYLKWVTKNLRARDFEE 84

Query: 112 WAKLADQVLEDHVYKDRIEWEYAEKLLNGDVLTANSKSEGVVAELLDISQRFGWDNDDKV 171
           WA+LADQVL D +Y+DRIEWE+A+ LLNGDV  A ++S   V+ELL+IS RF WDN+DK+
Sbjct: 85  WAQLADQVLSDPIYRDRIEWEFAQNLLNGDVSPARTQSS--VSELLEISTRFRWDNEDKL 144

Query: 172 GWSKIDYQLLGTSKGKRIPRLKERNDGELQNLKREK----ADRSREVGVRDKRVERRERL 231
           GWSKID++LLGTSKG RIPRL +  +  ++   ++K     D S++ G +D R  RRER+
Sbjct: 145 GWSKIDFELLGTSKGGRIPRLSDSPNNSIRVEDKKKGTDGVDSSQDDGEKDNRERRRERI 204

Query: 232 RIQR-----GLLS-------MNNDHNNRFNNVVKEGDVGKESSDQNAG---VYSPFPGRE 283
           ++QR     G  S        N+DH     N +K   +G  +++ ++G     S FPGRE
Sbjct: 205 KLQRRPNESGQRSTSVTQRRANSDH----FNPLKSDPIGATNNNTSSGRTETPSRFPGRE 264
[Close]
BLAST of Spo03906.1 vs. UniProtKB/TrEMBL
Match: A0A0V0HB17_SOLCH (Putative ovule protein (Fragment) OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 4.300e-53
Identity = 114/233 (48.93%), Postives = 157/233 (67.38%), Query Frame = 1 

		  

Query: 60  PKTLITYASSSSFPARDKIIDFGKFKGRMLGTLPSTYLKWVSNNLRARDFEEWAKLADQV 119
           P  +    S    PARD++IDFGK+KG+MLGTLPS YLKWV+ NLRARDFEEWA+LADQV
Sbjct: 4   PLAISAIGSRKVIPARDRVIDFGKYKGKMLGTLPSKYLKWVTKNLRARDFEEWAQLADQV 63

Query: 120 LEDHVYKDRIEWEYAEKLLNGDVLTANSKSEGVVAELLDISQRFGWDNDDKVGWSKIDYQ 179
           L D +YKDRIEWE+A+ LLNGDV  A +++   V+ELL+IS RF WDNDDK+GWSKID++
Sbjct: 64  LSDPIYKDRIEWEFAQNLLNGDVSPAGTQT--AVSELLEISTRFRWDNDDKLGWSKIDFE 123

Query: 180 LLGTSKGKRIPRLKERNDGELQNLKREKADRSREVGVRDKRVERRERLRIQR-------- 239
           LLGTSKG RIPRL +  +  ++   ++  D  +E G +D R  RRER+++QR        
Sbjct: 124 LLGTSKGGRIPRLSDSPNNSIRVEDKKGVDIPQEDGEKDNRERRRERVKLQRRQNESGSP 183

Query: 240 ----GLLSMNNDHNNRFNNVVKEGDVGKESSDQNAGVYSPFPGRETLLRNALN 281
                 ++    +++ FN    +     ++++ +    S FPGRE+LL+ AL+
Sbjct: 184 LQRSTSITQRRANSDHFNRPKSDPIRSFDTTNYSTETPSRFPGRESLLKKALS 234
[Close]
BLAST of Spo03906.1 vs. TAIR (Arabidopsis)
Match: AT1G51080.1 (unknown protein)

HSP 1 Score: 202.6 bits (514), Expect = 3.200e-52
Identity = 126/256 (49.22%), Postives = 165/256 (64.45%), Query Frame = 1 

		  

Query: 49  LKSSNILFS-QKPKTLITYASS-SSFPARDKIIDFGKFKGRMLGTLPSTYLKWVSNNLRA 108
           L SSN +FS  + K LI       +  ARD IIDFGK KG+MLGTLPS+YLKWVS NLRA
Sbjct: 36  LSSSNGIFSTNQSKPLIKKLQIIETLAARDTIIDFGKHKGKMLGTLPSSYLKWVSKNLRA 95

Query: 109 RDFEEWAKLADQVLEDHVYKDRIEWEYAEKLLNGD-----VLTANSKSE---GVVAELLD 168
             FE WAKLAD+VLED VYKDR EWE+AEK+L+G       LT+  KS      V+ LL+
Sbjct: 96  GVFEYWAKLADEVLEDDVYKDRTEWEFAEKILHGSDESMRALTSVRKSREEVNSVSMLLE 155

Query: 169 ISQRFGWDNDDKVGWSKIDYQLLGTSKGKRIPRLKERNDGELQNLKREKADRSREVGVRD 228
           IS+RFGWDN+DK+GWSKI+++LLGTSKG RIPRL++ N+ E +   R +  R RE+  ++
Sbjct: 156 ISERFGWDNEDKIGWSKINFELLGTSKGGRIPRLRKANEEEEE---RGEMVRRREIKKKE 215

Query: 229 --------KRVERRERLRIQRGLLSMNNDHNNRFNNVVKEGDVGKESSDQNA---GVYSP 284
                   +R +RRER+R      S+  D     N   ++G +GK    +      + SP
Sbjct: 216 EEEDENGWRRKQRRERMR-----QSLGRDDGKTVNRSEQKGVLGKLEDVEKQLEPKIQSP 275
The following BLAST results are available for this feature:
BLAST of Spo03906.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902201202|gb|KNA13934.1|9.9e-136100.hypothetical protein SOVF_1120... [more]
gi|731365369|ref|XP_010694488.1|3.6e-8566.5PREDICTED: uncharacterized pro... [more]
gi|661897728|emb|CDO99440.1|1.2e-5350.8unnamed protein product [Coffe... [more]
gi|460369099|ref|XP_004230401.1|2.1e-5349.6PREDICTED: uncharacterized pro... [more]
gi|697154817|ref|XP_009631645.1|3.6e-5346.3PREDICTED: uncharacterized pro... [more]
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BLAST of Spo03906.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9R4R3_SPIOL6.9e-136100.Uncharacterized protein OS=Spi... [more]
A0A0J8BE33_BETVU2.5e-8566.5Uncharacterized protein OS=Bet... [more]
A0A068TT13_COFCA8.7e-5450.8Uncharacterized protein OS=Cof... [more]
K4B1L2_SOLLC1.5e-5349.6Uncharacterized protein OS=Sol... [more]
A0A0V0HB17_SOLCH4.3e-5348.9Putative ovule protein (Fragme... [more]
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BLAST of Spo03906.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo03906.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1
Match NameE-valueIdentityDescription
AT1G51080.13.2e-5249.2unknown protein[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024530Putative quorum-sensing-regulated virulence factorPFAMPF12843QSregVF_bcoord: 79..102
score: 8.
NoneNo IPR availablePANTHERPTHR38357FAMILY NOT NAMEDcoord: 2..285
score: 3.0

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016556 mRNA modification
biological_process GO:0010050 vegetative phase change
biological_process GO:0009734 auxin-activated signaling pathway
biological_process GO:0009850 auxin metabolic process
biological_process GO:0030244 cellulose biosynthetic process
biological_process GO:0009855 determination of bilateral symmetry
biological_process GO:0010582 floral meristem determinacy
biological_process GO:0048438 floral whorl development
biological_process GO:0048439 flower morphogenesis
biological_process GO:0048193 Golgi vesicle transport
biological_process GO:0048519 negative regulation of biological process
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0046686 response to cadmium ion
biological_process GO:0007264 small GTPase mediated signal transduction
biological_process GO:0009616 virus induced gene silencing
biological_process GO:0010158 abaxial cell fate specification
biological_process GO:0010051 xylem and phloem pattern formation
biological_process GO:0015979 photosynthesis
biological_process GO:0009767 photosynthetic electron transport chain
biological_process GO:0080005 photosystem stoichiometry adjustment
biological_process GO:0006470 protein dephosphorylation
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0042744 hydrogen peroxide catabolic process
biological_process GO:0009555 pollen development
biological_process GO:0009658 chloroplast organization
biological_process GO:0006457 protein folding
biological_process GO:0006913 nucleocytoplasmic transport
biological_process GO:0010190 cytochrome b6f complex assembly
biological_process GO:0006661 phosphatidylinositol biosynthetic process
biological_process GO:0009887 animal organ morphogenesis
biological_process GO:0006886 intracellular protein transport
biological_process GO:0010155 regulation of proton transport
biological_process GO:0006144 purine nucleobase metabolic process
biological_process GO:0046939 nucleotide phosphorylation
biological_process GO:0006354 DNA-templated transcription, elongation
biological_process GO:0016117 carotenoid biosynthetic process
biological_process GO:0046034 ATP metabolic process
biological_process GO:0032502 developmental process
biological_process GO:0044206 UMP salvage
biological_process GO:0006223 uracil salvage
biological_process GO:0046777 protein autophosphorylation
biological_process GO:0010207 photosystem II assembly
biological_process GO:0010363 regulation of plant-type hypersensitive response
biological_process GO:0006612 protein targeting to membrane
biological_process GO:0009963 positive regulation of flavonoid biosynthetic process
biological_process GO:0006412 translation
biological_process GO:0042254 ribosome biogenesis
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0016020 membrane
cellular_component GO:0009523 photosystem II
cellular_component GO:0009534 chloroplast thylakoid
cellular_component GO:0009507 chloroplast
cellular_component GO:0009579 thylakoid
cellular_component GO:0008287 protein serine/threonine phosphatase complex
cellular_component GO:0005730 nucleolus
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0032040 small-subunit processome
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005789 endoplasmic reticulum membrane
cellular_component GO:0005634 nucleus
cellular_component GO:0005840 ribosome
cellular_component GO:0009536 plastid
cellular_component GO:0005829 cytosol
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0005795 Golgi stack
cellular_component GO:0042651 thylakoid membrane
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005886 plasma membrane
molecular_function GO:0004722 protein serine/threonine phosphatase activity
molecular_function GO:0003677 DNA binding
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:0003924 GTPase activity
molecular_function GO:0004845 uracil phosphoribosyltransferase activity
molecular_function GO:0005525 GTP binding
molecular_function GO:0031072 heat shock protein binding
molecular_function GO:0051082 unfolded protein binding
molecular_function GO:0046872 metal ion binding
molecular_function GO:0043621 protein self-association
molecular_function GO:0003756 protein disulfide isomerase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0005524 ATP binding
molecular_function GO:0004017 adenylate kinase activity
molecular_function GO:0005509 calcium ion binding
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo192880.81Barchart | Table
Spo229990.79Barchart | Table
Spo149140.79Barchart | Table
Spo123020.78Barchart | Table
Spo008720.77Barchart | Table
Spo258170.77Barchart | Table
Spo093870.76Barchart | Table
Spo006670.76Barchart | Table
Spo233840.76Barchart | Table
Spo026960.74Barchart | Table
Spo026480.74Barchart | Table
Spo169960.74Barchart | Table
Spo046530.74Barchart | Table
Spo232490.73Barchart | Table
Spo218080.73Barchart | Table
Spo271630.73Barchart | Table
Spo069530.73Barchart | Table
Spo044330.73Barchart | Table
Spo091490.73Barchart | Table
Spo059420.73Barchart | Table
Spo002140.73Barchart | Table
Spo269860.72Barchart | Table
Spo203870.72Barchart | Table
Spo240810.72Barchart | Table
Spo116880.72Barchart | Table
Spo079150.72Barchart | Table
Spo134510.72Barchart | Table
Spo088240.71Barchart | Table
Spo108640.71Barchart | Table
Spo237120.71Barchart | Table
Spo115240.71Barchart | Table
Spo042000.71Barchart | Table
Spo213830.70Barchart | Table
Spo004050.70Barchart | Table
Spo013050.70Barchart | Table
Spo062780.70Barchart | Table
Spo095360.70Barchart | Table
Spo153900.70Barchart | Table
Spo154610.70Barchart | Table
Spo181110.70Barchart | Table
Spo201060.70Barchart | Table
Spo251960.70Barchart | Table
Spo270810.70Barchart | Table
Spo011010.69Barchart | Table
Spo266730.69Barchart | Table
Spo087150.69Barchart | Table
Spo263550.69Barchart | Table
Spo097690.69Barchart | Table
Spo097770.69Barchart | Table
Spo119510.69Barchart | Table
Spo122280.69Barchart | Table
Spo131800.69Barchart | Table
Spo024800.69Barchart | Table
Spo025130.69Barchart | Table
Spo002050.69Barchart | Table
Spo097980.69Barchart | Table
Spo104930.69Barchart | Table
Spo010540.69Barchart | Table
Spo150140.68Barchart | Table
Spo193410.68Barchart | Table
Spo300040.68Barchart | Table
Spo035720.68Barchart | Table
Spo019540.68Barchart | Table
Spo161150.68Barchart | Table
Spo162130.68Barchart | Table
Spo093350.68Barchart | Table
Spo128750.68Barchart | Table
Spo223090.68Barchart | Table
Spo261830.68Barchart | Table
Spo022320.68Barchart | Table
Spo273460.68Barchart | Table
Spo134900.68Barchart | Table
Spo063980.68Barchart | Table
Spo240160.68Barchart | Table
Spo095540.67Barchart | Table
Spo114170.67Barchart | Table
Spo115090.67Barchart | Table
Spo149380.67Barchart | Table
Spo150840.67Barchart | Table
Spo160050.67Barchart | Table
Spo180800.67Barchart | Table
Spo031950.67Barchart | Table
Spo207700.67Barchart | Table
Spo211550.67Barchart | Table
Spo025730.67Barchart | Table
Spo012520.67Barchart | Table
Spo260060.67Barchart | Table
Spo094280.67Barchart | Table
Spo152220.66Barchart | Table
Spo030640.66Barchart | Table
Spo093170.66Barchart | Table
Spo041420.66Barchart | Table
Spo216600.66Barchart | Table
Spo144030.66Barchart | Table
Spo226830.66Barchart | Table
Spo143500.66Barchart | Table
Spo233820.66Barchart | Table
Spo053070.66Barchart | Table
Spo238000.66Barchart | Table
Spo060600.66Barchart | Table
Spo077330.66Barchart | Table
Spo108350.66Barchart | Table
Spo113690.66Barchart | Table
Spo166950.66Barchart | Table
Spo157020.66Barchart | Table
Spo190190.66Barchart | Table
Spo109160.65Barchart | Table
Spo084070.65Barchart | Table
Spo019230.65Barchart | Table
Spo114310.65Barchart | Table
Spo256590.65Barchart | Table
Spo071680.65Barchart | Table
Spo256920.65Barchart | Table
Spo224510.65Barchart | Table
Spo172500.65Barchart | Table
Spo266440.65Barchart | Table
Spo230760.65Barchart | Table
Spo142560.65Barchart | Table
Spo232830.65Barchart | Table
Spo154990.65Barchart | Table
Spo047250.65Barchart | Table
Spo113170.65Barchart | Table
Spo269750.65Barchart | Table