Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTGTTGAAGTTGCCTTGGAAGATGATCTTTTCTTTGCTGACTTAAATAGGCAAATCTCTCTGTTGATAGATGATGATGATAACGATTGCCACGATTTCCCCGTTGCTCATTTCCCTTGGATTTCTCATCAGGTACTTGTTATCCTCCATGTTTTTTCCATAACTCGAGTTGTGTACACTATCTTATACTAACAGAGAAAAAAGTTGGTCACGTTTCCTATAAAAACATAGTTATCGTGATTGGATTAAAAGAATTTGTTATAAACATATATATGGATACAATCAAATGAATTCTTGTAATTGTCATCAGTGGAAAAAGTTGTCCATGTTCTTTCAATAACTCGTTAATGGTACTTCAAACTATAACAATCTTATCTTTATATAAACAAGTAGGAGAAATATTTAGACATTTGACTGCAGTCTAATAATTGAACTAAATATCAACCAAAACTTGGCTCATGGTCTGTCGATTTATTGGATTTGGATTGCAATATATGGCCTTGTTTGGTTACATATACGAGTTGTTATATGATTTGGTTTGTTTATTGAATATGCAGGGCTATCCAGGATCAATGAACCATCATCCACAAATAATGGGATCACAATATTTGTACCAAGAAAATAGCAGGATAAGCAAAGGAACAGGTGTATTTATTCCACAATCATCTCAGCCAAGGAGAAAATACAAGCAAGGAAAGCGTAATTCACCACCATCCTACACCTCCAAATCTAACAACAAACAACAACTTGTTAATGCCAAGGGTAGGGTGGCAAACACGCCTGCTCATACTAATCTCTCCGCGGATAATTACGCAACTAGTTACATTAATACTTAATAGGTACTAACCAACTTAATTCATCAAGATTATGGCTAGCTATTTATAATTTTTAGGGATTGAAATTCAATAATTACCAGTATTCTTTTCAGATGATGATGTAGTTTGCTAAGATAAATAAGTAAAATTAATGAGCTACTTAAATTATTATAGTTAATTAGTAGCAGCTTGATTTTTGTAACATAATTTGTTATAAGGGAGGTCTAAGCAATGGACTGCAAGACCTTAATTATATTAATTGTAAGCCTCATTTTCCCATTGCTATTTTTCATATATAAACAATTATTATTTGCCGTCCGAAATTCGTTTTAAATTATTCTTGTAACTAGTCTGTATAATTATTATTTGTCTTATGATCGAATGAGTATCACATCATATTGTTTTAACCTGTTTTATAAGTTTTACTCCTTTTAATTTCTCAATGAGCTAGCATAAAAATGGATAAAAGAGCAAAATATAGAGATGCGAAGATGAG ATGGCTGTTGAAGTTGCCTTGGAAGATGATCTTTTCTTTGCTGACTTAAATAGGCAAATCTCTCTGTTGATAGATGATGATGATAACGATTGCCACGATTTCCCCGTTGCTCATTTCCCTTGGATTTCTCATCAGGGCTATCCAGGATCAATGAACCATCATCCACAAATAATGGGATCACAATATTTGTACCAAGAAAATAGCAGGATAAGCAAAGGAACAGGTGTATTTATTCCACAATCATCTCAGCCAAGGAGAAAATACAAGCAAGGAAAGCGTAATTCACCACCATCCTACACCTCCAAATCTAACAACAAACAACAACTTGTTAATGCCAAGGGTAGGGTGGCAAACACGCCTGCTCATACTAATCTCTCCGCGGATAATTACGCAACTAGTTACATTAATACTTAATAGGTACTAACCAACTTAATTCATCAAGATTATGGCTAGCTATTTATAATTTTTAGGGATTGAAATTCAATAATTACCAGTATTCTTTTCAGATGATGATGTAGTTTGCTAAGATAAATAAGTAAAATTAATGAGCTACTTAAATTATTATAGTTAATTAGTAGCAGCTTGATTTTTGTAACATAATTTGTTATAAGGGAGGTCTAAGCAATGGACTGCAAGACCTTAATTATATTAATTGTAAGCCTCATTTTCCCATTGCTATTTTTCATATATAAACAATTATTATTTGCCGTCCGAAATTCGTTTTAAATTATTCTTGTAACTAGTCTGTATAATTATTATTTGTCTTATGATCGAATGAGTATCACATCATATTGTTTTAACCTGTTTTATAAGTTTTACTCCTTTTAATTTCTCAATGAGCTAGCATAAAAATGGATAAAAGAGCAAAATATAGAGATGCGAAGATGAG ATGGCTGTTGAAGTTGCCTTGGAAGATGATCTTTTCTTTGCTGACTTAAATAGGCAAATCTCTCTGTTGATAGATGATGATGATAACGATTGCCACGATTTCCCCGTTGCTCATTTCCCTTGGATTTCTCATCAGGGCTATCCAGGATCAATGAACCATCATCCACAAATAATGGGATCACAATATTTGTACCAAGAAAATAGCAGGATAAGCAAAGGAACAGGTGTATTTATTCCACAATCATCTCAGCCAAGGAGAAAATACAAGCAAGGAAAGCGTAATTCACCACCATCCTACACCTCCAAATCTAACAACAAACAACAACTTGTTAATGCCAAGGGTAGGGTGGCAAACACGCCTGCTCATACTAATCTCTCCGCGGATAATTACGCAACTAGTTACATTAATACTTAA MAVEVALEDDLFFADLNRQISLLIDDDDNDCHDFPVAHFPWISHQGYPGSMNHHPQIMGSQYLYQENSRISKGTGVFIPQSSQPRRKYKQGKRNSPPSYTSKSNNKQQLVNAKGRVANTPAHTNLSADNYATSYINT Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo03558.1 vs. NCBI nr
Match: gi|902237488|gb|KNA24825.1| (hypothetical protein SOVF_012020 [Spinacia oleracea]) HSP 1 Score: 277.7 bits (709), Expect = 1.100e-71 Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 1
BLAST of Spo03558.1 vs. NCBI nr
Match: gi|731366828|ref|XP_010695281.1| (PREDICTED: uncharacterized protein LOC104907951 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 155.2 bits (391), Expect = 8.100e-35 Identity = 92/135 (68.15%), Postives = 106/135 (78.52%), Query Frame = 1
BLAST of Spo03558.1 vs. NCBI nr
Match: gi|1000970935|ref|XP_002517185.2| (PREDICTED: uncharacterized protein LOC8271592 [Ricinus communis]) HSP 1 Score: 90.5 bits (223), Expect = 2.500e-15 Identity = 54/105 (51.43%), Postives = 72/105 (68.57%), Query Frame = 1
BLAST of Spo03558.1 vs. NCBI nr
Match: gi|596287933|ref|XP_007225855.1| (hypothetical protein PRUPE_ppa013511mg [Prunus persica]) HSP 1 Score: 88.2 bits (217), Expect = 1.200e-14 Identity = 57/111 (51.35%), Postives = 70/111 (63.06%), Query Frame = 1
BLAST of Spo03558.1 vs. NCBI nr
Match: gi|645232677|ref|XP_008222977.1| (PREDICTED: uncharacterized protein LOC103322815 [Prunus mume]) HSP 1 Score: 87.0 bits (214), Expect = 2.700e-14 Identity = 57/111 (51.35%), Postives = 70/111 (63.06%), Query Frame = 1
BLAST of Spo03558.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RZ83_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_012020 PE=4 SV=1) HSP 1 Score: 277.7 bits (709), Expect = 7.500e-72 Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 1
BLAST of Spo03558.1 vs. UniProtKB/TrEMBL
Match: A0A0J8E3R6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g123980 PE=4 SV=1) HSP 1 Score: 155.2 bits (391), Expect = 5.600e-35 Identity = 92/135 (68.15%), Postives = 106/135 (78.52%), Query Frame = 1
BLAST of Spo03558.1 vs. UniProtKB/TrEMBL
Match: M5XMB2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013511mg PE=4 SV=1) HSP 1 Score: 88.2 bits (217), Expect = 8.500e-15 Identity = 57/111 (51.35%), Postives = 70/111 (63.06%), Query Frame = 1
BLAST of Spo03558.1 vs. UniProtKB/TrEMBL
Match: A0A0B2P2G9_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_004481 PE=4 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 3.200e-14 Identity = 55/106 (51.89%), Postives = 73/106 (68.87%), Query Frame = 1
BLAST of Spo03558.1 vs. UniProtKB/TrEMBL
Match: I1MR77_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_17G015900 PE=4 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 3.200e-14 Identity = 55/106 (51.89%), Postives = 73/106 (68.87%), Query Frame = 1
BLAST of Spo03558.1 vs. TAIR (Arabidopsis)
Match: AT3G06070.1 (unknown protein) HSP 1 Score: 65.5 bits (158), Expect = 3.000e-11 Identity = 40/91 (43.96%), Postives = 62/91 (68.13%), Query Frame = 1
BLAST of Spo03558.1 vs. TAIR (Arabidopsis)
Match: AT5G19190.1 (unknown protein) HSP 1 Score: 64.3 bits (155), Expect = 6.600e-11 Identity = 54/157 (34.39%), Postives = 78/157 (49.68%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo03558.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo03558.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo03558.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 0
BLAST of Spo03558.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 2
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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