Spo03526 (gene) | SpinachBase

Overview


Name	Spo03526
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Triosephosphate isomerase (5.3.1.1)
Location	SpoScf_01815 : 34877 .. 40834 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACGATTCAGCACCATCAACTTCCTTCGACTCCGTTTCTCTTTCCTCTCAGTTTCTGAAAATGTCTAGAAAGTTCTTGGTTGGCGGAAACTGGAAATGCGTAAGTTTGCTCTCTTCTCACAAATGTCATCAATTTCAGTTCAATCTTCAACGCCAATTATAATTATAGGTTTTTGGTTATTTTTCTGCGTGAATTGATTAGTAATTTTAGGATTTACTCATGTTGATTGGACCCTTTCCCCTGCAATTTTAATGTCGTTCTATGAATCTGCTTGATTGATCATATTTTTAACTCAGTTTCATTTCTGTTTGAACCTGAATCATATAAGGATTATAGAGTAGTAGGTTCATTATTGTTAATCTGAATTTCAAATTTTATTAATAAGCGATAATTGGAGGTTAAAGACCACTATATTCCTAATTCAGAAATCAGAATGCTTCTAGGTTAATTATGGTGTTATTTATGCCATATTATGATAACAATCTCTGTTTCAGGTGGAAATTCATCATTGTCTCATTGATATTAGCAAAGTCTATCCTAGTGAATATATGAGCAGCATCACGAGCTCCAATGTCTTGCGTCTTAGAGAACTTCTGAACTAGCTTCAGCAATGCAACATCATTCTTATCCAGCTCCCCAAAGAAGAAAAGGAGAATACCCCTTTCATCTATAAGAAAACCCAGGAACTTGCCAGAGGTAACTCCAAAGATACAATTCTACCTTGAATGGTGAATTAAGATATAAGGAGGCAAAAATTAGCAAAATGCTGGTTAATTTTTTTTGCAATAATAGATGGTTAGGAGTTTAGGACATCTCATATTCTCAGTAATAGAATTGTAGAAAAGAGGAGCCTTTTATATTGTAAGAGAGAGTACTAGGAGGTGGCTGATTGATCATGGTGAATAAGTTTGCTAAATTTGGTGCTGAAATTTATTCTATTGTCTCCAGAATGGAACCACTGAGGAAGTGAAGAAACTTGTGACGACATTGAATGAAGCCGAAGTTCCCTCTGAAGAGGATCTGGGTGAGTGTATAACAATCTTATTTCTTATATTGCCTGGAATGTGAATTTTGTGTACAAATGGTTACTTTGATTGTCTTGATGTTAGTTGTGGTAGATGTAGTCAATGTTGACTATTAGTTCAGTGTGGCAGCAAAGAAGGACAAGGATGAAATCGATTATTGATTGTTTTCTTTTCTATTGTGGTGGCAAAGACATCATTTAAGCATATCATCTGAGGAGCGGTGGTGGATGATGTTGCTGACCTAATTCAGCATGTGTATGCCTCTAGGAAAGGATGGATGTGTGATTGTGCTCACCAGATATTATAGATGACTTAGGTATTAGGGTTTAGCATTGGTGGGTGTTTCATAAATTTTCTTATCTGCTCCAATCATTCAGATTTACACCGTGTCGTTGGCCTGTTACTGTGGCTATACGTTGACTAGCTAATGATGGGTATGGGTTTTTAATGATTCTTGGTGTAGGGTTCGTAAACTATTCTCTTTTTCTATATGAGCGGTATCATCAAGTTTGTAAGTTTGTTAGAGTTCATCCCAAACTAGTCTACTGCTTGATATTGAATTTTAGCCTTTCCGGGAATGTCAGCATAACATAAACAGTGAGCATTCTTCTATTTATCGGTGAAACCTATTCGTACCTCATGCATACTGTTGGAACTTCTTTTATCTTGAAGGTTCTGCTCAGAAGTTGCAGAAGTATATGATCTTACGTGTGACTGAAGACCATTCTTGTCTTTTTTTATGCTCCAGACCTCCAGTATATGTATTTTCTAAAAAAACTTTCAATATCAGGACATATAACTCTATCACATAGTTTTGAAGGGTTGAGTTGAAATTGTACTGAATGTCCATCTCTGTTGTTTTTCTTCATTTCTTAGAATCCTTTCCTTTATGCAATAATTGTAGCATCTCAAGCCAATTATACTTACAAAGTAATAAACTTTGAATTGGAAGAACGGTTGTTCTGTGGTTGTGACATGGTTCTTTTCCCTTGCAGAGGTTGTTGTCAGCCCTCCATTTGTATTTCTGTCTCTGGTAAAAATCTTATTGAGACCTGATTTTCATGTTGCTGCACAAAACTGTTGGGTACGAAAAGGTGGTGCTTTCACAGGTGAAGTTAGGTAGGCAATGATTTAATCGGACCATTTGTTCCGAATCAATTATTTTGCTGGCAGTTATGCAGATATCTTTACAATGCATCGTATAAACTTATAGCCTATAAATCTGTAAATGATGTTTAGCTTATTCAGGTTCCGGTACGGTGAATGCTATACTCGATAAATTAACATAAACAAGTTCAGTTAACTTTACTAGCGTCTTCTTGAACAATAAATATATTGCATCTGCTCTACTCAAGTGTATATCAATGATTCACCTATCAAATATAAAACTCACTTATAGAGTTATAGTGTTCCAATCTGAAACAGTCTCGACATAATGCTTGCTTTAATCTCTCTGTATCAGGCACATATCTGACCTAAATTGCATGTAAGTTCTTGAATCTAATCTTAGAATTTTTCAAAGAATGCAATGAATTTCTTATACGTAGTGAGTCTGAGTGAAACCTCCCAATCAGGGACTGTGGGAGTCATCATCACCTATGCACTCATGTTTCAAACACTGACTAGTGTTGTTTCAGTTATTTCTTTCTCCATGATACATTCACTATGAATCCCTTATTTTTCCAACGAGGAATACATTCACCTATGCACTCATGTTTCAAACACTGACTGTGGGAGTTATTTCTTTCTCCATGATACATTTCCTCCACATCGGCGCTTTTCTGGTTACATATTATTCTTTGTAATATAATGTGACAATCCTTAAGTATCTTCCATAGCATTTACCATATTAGAAGGCAGTCTCTCTGTAGTTCATTTAATCCTCTCTATTTTCTGAGTGGTAATTTCTGATTTATATTTAATAGGATGCCTGGGTTGCTTATTAATATACACAATATCACGTTCATCTCTAACTGACTGCATTAGAAAGTTATTTAAGTTGTAAATCTGGTGCAATCTCTTCTTGCTAAGTGTAGCAATAACCGGCAAGGAAAAAAGTGATTAATTATGAACTGTAATCATCAACTTTTGCAGTTTCTCGTTATGTTTGATTTGCTTGACAATTTCATGTTTGATTCTTGAAAGTCATTTGTTAGCATGCAAACTGTTTATTTTGATATTGGATTCAATATTCTCAGTTGCTGATTCAGAACTTCCTCTGTCTTTCTCTTTGTTTCCTCTATTCGATTTTGCAGTGCAGAAATGCTGGTCAATTTGGATATTAACTGGGTGATATTGGGTCATTCAGAGAGAAGAGCCCTATTAAACGAGACAAATGATGTATGATGTGCCACCTTCAGAATACTTAAATGATTTCTTGTTGTTCGGTTTGGTATAGTATTCTGATTATATTTGTGGAGTAAAATGTCTTTGTTGAACTTGTGTTATTTGTGTTTCCTCTTCCAGTTTGTTGCAGACAAGGCCTGAAAGTGATTGCTTACGTAGGCGAGACTTTGGAGCAGCGTGAAGCAGGGACTACAGTGGAGGTAGTTGCAGCTCAGACAAAAGCTATTGCTGGTAAAGATGCTGCTAGTTGTTTTGAACGTTTTATAAGAAACTTATCCTTTTGCAAATCTTCATGACCTCATCAGCATTAATATGTCTGGTTGATTGTTACGTTTTTCAGACCGCATAATGAACCAGTTTGGGCCATTGGAACTGGCAAGGTGGCTACCCCTGCTCAGGCTCAGGAAGTAAGTCTAGCTTCCATAGAGTTGACCTATGTTTTTGGACTTGAATGTAAACTTTGAATGATGCTTGTTTAGTTAGTTTTGATTGACATGCAGCCTAATGCTGAACGATAGGTTTTCTATACTTTTATTGCATGGTTATAAACTATAAAGTGACTCTGATAACAGGGATTATAGTCTTTCATTGTTTCCATCATTTTCACGTCCATTTGGAACTGAGGAAATGGCTGAAGGAGAATGTTAGTGCCCAAGTTGCTGAATCAACCAGAATTATCTATGGAGGTACTTAAATAAAGAAACTCTGTAGAACTATTTTTGGACTATGAACATGAACAATTTGCGGATGCAACGTAACTGTGAAAAAGTTGAGAACTAGTCCAGTTAGCATGGTTTATGAGTTAAGTCTGACATTCTTGATTCAGTGAAGATTTTGCTTGGGATGGGTGGCATGAATATCATCATACATATATATATATATATATATAATATTATAATCATAAGCCGTAAACCCCGTCATCTCCCAGCTTTCTATAGTGTTGTCAAACTTGGAGGTAACTGCAAAGAGTTGGCAGCGCAGCCTGATGTTGATGGATTTTTGGTCGAAGGTGGTGGTATTTTTAAGCAATTATAATTTCAATGAATATTAACATAATAGAATAGGTAAAAGATTTGGCATCTAATCCTCTTTTGGTCCATGCAGACAGAGTTTGTTGAGATCATAAAGTCTGCTACAGTGAACAAGATCTAGTCTAGTTTCGGAAACCTCTTCTAGAACTTGTTGCTTTTAGGAGTGAATTTGCCTTTTTATTTTTATTTTTATTTTTATTTTTTATGAAAGGTTTACAAGAAGAGAATGTCAAAAGTAAAAATTAAAATAAAAGTGCACAAGTAGTTGTTCTTGTTTTGGGTCAATATGAATCCACGTGAGCTTATCTTTTGGTAATTGACTTAAGCTTATTTCTACGCTGTATGAAATACGGGTGTCTCAGTCTGTTTCTCATAAAAGATGAAGAGCACGGAAATGAGATCGATCTAGTAGGTGGAATCTCTTTGCATCCGAAAACGAGGATTGAAAGATACATACTCCAGTAGTCATTAGTCAACTTGTCTTTATTTACAATTCCTCGTGATAAAAGCAGGATTTGTTATTAGACCTGATCTCCCTAAAGATTGACCTGATTCTTTCTTGAAATCTTTGCCTTAGTTTTTTTTTTTTTTTTTTTTTTAAGTTGAAACGGGTCAAATCATGTAAAATACAAGTATTATAATTCGTCAATCGTCATAGTGTTTGTTAAAGGAGAAAGGTACAAAGGACAATAATTAATAAACTGGATTTCGTTTAGATTTGTATGACCCACTACGATAAGGTTTAAAGCCTTAAACTGTGTTTTTTACTTCGTTTTTGTTCTTCTTTATACTTGTGGTGTAAAAGAGGGTTCTGTTGGGGACGTTAATCACGCTATCAAAACAAACCTCAACAATACCGACAAAACACTTCTATTACTCTTTATACTAAAACAGACACCAGGAATGACACATGTCATTTTCGGGGGTAAAAATTTTCCGCCTAAAATATTTTCCTAAAATATATGTCTTTTTATTTTATTTTTATTCTCTTCTCTTTTTTATAAACTATATATGTATGAAAAATATATTAGTTTATAAGTTATGGCAATAATAGATACCACGTAATAATAATTTTGCTTAATACCACGTAATAATATTTTAGTCAAATCGGTACGTTAATAATGGAAAATATGTTCACACGATATATCGGTTAAATTAGCATATTACACATATATAATATGCATATTAGATTACTGAAATTAAATGAGTATGTTAAAAAATATTACAATTATGCAATATTTTGGGATATAGGTAAGTATTTTATAAAAAAAATGATCATAATCCGTGCGTGCACGGGATGTAATCTAATTATTTTAATATATCTTATTGGAGCTCCCATTCTATTTGAAATTAGGCGTGTCGTTTTAATGAGGATTTAAATTGATCTAACCCGTCCTTTTTCTCTCTTTTCTCTCTCATCTTTTAGGGCTTCAATTTACTTGGCCGTTTAGGCCGGAAGTAGTCTAATTTCCGAAGAAATTAAACTATTTCCGATCCTTTTTCTTGCTTTTCATTGTTTTCTTTTCATGTTTTTTCTTGTTTTGATTTCTTTTCCGT

mRNA sequence

ACGATTCAGCACCATCAACTTCCTTCGACTCCGTTTCTCTTTCCTCTCAGTTTCTGAAAATGTCTAGAAAGTTCTTGGTTGGCGGAAACTGGAAATGCAATGGAACCACTGAGGAAGTGAAGAAACTTGTGACGACATTGAATGAAGCCGAAGTTCCCTCTGAAGAGGATCTGGAGGTTGTTGTCAGCCCTCCATTTGTATTTCTGTCTCTGGTAAAAATCTTATTGAGACCTGATTTTCATGTTGCTGCACAAAACTGTTGGGTACGAAAAGGTGGTGCTTTCACAGGTGAAGTTAGTGCAGAAATGCTGGTCAATTTGGATATTAACTGGGTGATATTGGTTTGTTGCAGACAAGGCCTGAAAGTGATTGCTTACGTAGGCGAGACTTTGGAGCAGCGTGAAGCAGGGACTACAGTGGAGGTAGTTGCAGCTCAGACAAAAGCTATTGCTGACCGCATAATGAACCAGTTTGGGCCATTGGAACTGGCAAGGTGGCTACCCCTGCTCAGGCTCAGGAAGGATTATAGTCTTTCATTGTTTCCATCATTTTCACGTCCATTTGGAACTGAGGAAATGGCTGAAGGAGAATGTTAGTGCCCAAGTTGCTGAATCAACCAGAATTATCTATGGAGTCTGTTTCTCATAAAAGATGAAGAGCACGGAAATGAGATCGATCTAGTAGGTGGAATCTCTTTGCATCCGAAAACGAGGATTGAAAGATACATACTCCAGTAGTCATTAGTCAACTTGTCTTTATTTACAATTCCTCGTGATAAAAGCAGGATTTGTTATTAGACCTGATCTCCCTAAAGATTGACCTGATTCTTTCTTGAAATCTTTGCCTTAGTTTTTTTTTTTTTTTTTTTTTTAAGTTGAAACGGGTCAAATCATGTAAAATACAAGTATTATAATTCGTCAATCGTCATAGTGTTTGTTAAAGGAGAAAGGTACAAAGGACAATAATTAATAAACTGGATTTCGTTTAGATTTGTATGACCCACTACGATAAGGTTTAAAGCCTTAAACTGTGTTTTTTACTTCGTTTTTGTTCTTCTTTATACTTGTGGTGTAAAAGAGGGTTCTGTTGGGGACGTTAATCACGCTATCAAAACAAACCTCAACAATACCGACAAAACACTTCTATTACTCTTTATACTAAAACAGACACCAGGAATGACACATGTCATTTTCGGGGGTAAAAATTTTCCGCCTAAAATATTTTCCTAAAATATATGTCTTTTTATTTTATTTTTATTCTCTTCTCTTTTTTATAAACTATATATGTATGAAAAATATATTAGTTTATAAGTTATGGCAATAATAGATACCACGTAATAATAATTTTGCTTAATACCACGTAATAATATTTTAGTCAAATCGGTACGTTAATAATGGAAAATATGTTCACACGATATATCGGTTAAATTAGCATATTACACATATATAATATGCATATTAGATTACTGAAATTAAATGAGTATGTTAAAAAATATTACAATTATGCAATATTTTGGGATATAGGTAAGTATTTTATAAAAAAAATGATCATAATCCGTGCGTGCACGGGATGTAATCTAATTATTTTAATATATCTTATTGGAGCTCCCATTCTATTTGAAATTAGGCGTGTCGTTTTAATGAGGATTTAAATTGATCTAACCCGTCCTTTTTCTCTCTTTTCTCTCTCATCTTTTAGGGCTTCAATTTACTTGGCCGTTTAGGCCGGAAGTAGTCTAATTTCCGAAGAAATTAAACTATTTCCGATCCTTTTTCTTGCTTTTCATTGTTTTCTTTTCATGTTTTTTCTTGTTTTGATTTCTTTTCCGT

Coding sequence (CDS)

ATGTCTAGAAAGTTCTTGGTTGGCGGAAACTGGAAATGCAATGGAACCACTGAGGAAGTGAAGAAACTTGTGACGACATTGAATGAAGCCGAAGTTCCCTCTGAAGAGGATCTGGAGGTTGTTGTCAGCCCTCCATTTGTATTTCTGTCTCTGGTAAAAATCTTATTGAGACCTGATTTTCATGTTGCTGCACAAAACTGTTGGGTACGAAAAGGTGGTGCTTTCACAGGTGAAGTTAGTGCAGAAATGCTGGTCAATTTGGATATTAACTGGGTGATATTGGTTTGTTGCAGACAAGGCCTGAAAGTGATTGCTTACGTAGGCGAGACTTTGGAGCAGCGTGAAGCAGGGACTACAGTGGAGGTAGTTGCAGCTCAGACAAAAGCTATTGCTGACCGCATAATGAACCAGTTTGGGCCATTGGAACTGGCAAGGTGGCTACCCCTGCTCAGGCTCAGGAAGGATTATAGTCTTTCATTGTTTCCATCATTTTCACGTCCATTTGGAACTGAGGAAATGGCTGAAGGAGAATGTTAG

Protein sequence

MSRKFLVGGNWKCNGTTEEVKKLVTTLNEAEVPSEEDLEVVVSPPFVFLSLVKILLRPDFHVAAQNCWVRKGGAFTGEVSAEMLVNLDINWVILVCCRQGLKVIAYVGETLEQREAGTTVEVVAAQTKAIADRIMNQFGPLELARWLPLLRLRKDYSLSLFPSFSRPFGTEEMAEGEC

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo03526.1	Spo03526.1	mRNA

Homology

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BLAST of Spo03526.1 vs. NCBI nr
Match: gi|731348961|ref|XP_010685754.1| (PREDICTED: triosephosphate isomerase, cytosolic-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 222.2 bits (565), Expect = 7.000e-55
Identity = 117/157 (74.52%), Postives = 126/157 (80.25%), Query Frame = 1


		  
Query: 1   MSRKFLVGGNWKCNGTTEEVKKLVTTLNEAEVPSEEDLEVVVSPPFVFLSLVKILLRPDF 60
           MSR+F VGGNWKCNGTTEEV+KL+TTLNEAEVPSEED+EVVVSPPFVFL+LVK LLR DF
Sbjct: 1   MSRRFFVGGNWKCNGTTEEVRKLLTTLNEAEVPSEEDVEVVVSPPFVFLTLVKNLLRTDF 60

Query: 61  HVAAQNCWVRKGGAFTGEVSAEMLVNLDINWVIL---------------------VCCRQ 120
           HVAAQNCWVRKGGAFTGE+SA+MLVNL INWVIL                         Q
Sbjct: 61  HVAAQNCWVRKGGAFTGEISADMLVNLGINWVILGHSERRALLNETNDFVADKVSYALSQ 120

Query: 121 GLKVIAYVGETLEQREAGTTVEVVAAQTKAIADRIMN 137
           GLKVIA VGETLEQREAG+T+EVVAAQTKAIAD IMN
Sbjct: 121 GLKVIACVGETLEQREAGSTMEVVAAQTKAIADLIMN 157

[Close]

BLAST of Spo03526.1 vs. NCBI nr
Match: gi|510937277|gb|AGN52927.1| (TPI, partial [Silene latifolia])

HSP 1 Score: 218.0 bits (554), Expect = 1.300e-53
Identity = 116/157 (73.89%), Postives = 124/157 (78.98%), Query Frame = 1


		  
Query: 1   MSRKFLVGGNWKCNGTTEEVKKLVTTLNEAEVPSEEDLEVVVSPPFVFLSLVKILLRPDF 60
           MSRKF VGGNWKCNGT EEVKKLVTTLNE+EVPSE+ +EVVVSPPFV+L+LVK LLRPDF
Sbjct: 1   MSRKFFVGGNWKCNGTYEEVKKLVTTLNESEVPSEDVVEVVVSPPFVYLTLVKNLLRPDF 60

Query: 61  HVAAQNCWVRKGGAFTGEVSAEMLVNLDINWVIL---------------------VCCRQ 120
           HVAAQNCWVRKGGAFTGEVSAEMLVNL INWVIL                         Q
Sbjct: 61  HVAAQNCWVRKGGAFTGEVSAEMLVNLGINWVILGHSERRALLNETNEFVADKVAYALSQ 120

Query: 121 GLKVIAYVGETLEQREAGTTVEVVAAQTKAIADRIMN 137
           GLKVIA VGETLEQREAGTT++VVAAQTKAIAD + N
Sbjct: 121 GLKVIACVGETLEQREAGTTMKVVAAQTKAIADLVSN 157

[Close]

BLAST of Spo03526.1 vs. NCBI nr
Match: gi|674930448|emb|CDY02939.1| (BnaC04g25470D [Brassica napus])

HSP 1 Score: 213.0 bits (541), Expect = 4.300e-52
Identity = 110/156 (70.51%), Postives = 123/156 (78.85%), Query Frame = 1


		  
Query: 1   MSRKFLVGGNWKCNGTTEEVKKLVTTLNEAEVPSEEDLEVVVSPPFVFLSLVKILLRPDF 60
           M+RKF VGGNWKCNGT EEVKK+V TLNEA+VPS++ +EVVVSPP+VFL LVK +LRPDF
Sbjct: 1   MARKFFVGGNWKCNGTAEEVKKIVNTLNEAQVPSQDVVEVVVSPPYVFLPLVKSILRPDF 60

Query: 61  HVAAQNCWVRKGGAFTGEVSAEMLVNLDINWVIL--------------------VCCRQG 120
           HVAAQNCWV+KGGAFTGEVSAEMLVNLDI WVIL                        QG
Sbjct: 61  HVAAQNCWVKKGGAFTGEVSAEMLVNLDIPWVILGHSERRALLNESNEAGDKVAYALAQG 120

Query: 121 LKVIAYVGETLEQREAGTTVEVVAAQTKAIADRIMN 137
           LKVIA VGETLEQREAG+T++VVAAQTKAIADR+ N
Sbjct: 121 LKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSN 156

[Close]

BLAST of Spo03526.1 vs. NCBI nr
Match: gi|923678122|ref|XP_013652726.1| (PREDICTED: triosephosphate isomerase, cytosolic [Brassica napus])

HSP 1 Score: 212.6 bits (540), Expect = 5.600e-52
Identity = 110/157 (70.06%), Postives = 123/157 (78.34%), Query Frame = 1


		  
Query: 1   MSRKFLVGGNWKCNGTTEEVKKLVTTLNEAEVPSEEDLEVVVSPPFVFLSLVKILLRPDF 60
           M+RKF VGGNWKCNGT EEVKK+V TLNEA+VPS++ +EVVVSPP+VFL LVK +LRPDF
Sbjct: 1   MARKFFVGGNWKCNGTAEEVKKIVNTLNEAQVPSQDVVEVVVSPPYVFLPLVKSILRPDF 60

Query: 61  HVAAQNCWVRKGGAFTGEVSAEMLVNLDINWVIL---------------------VCCRQ 120
           HVAAQNCWV+KGGAFTGEVSAEMLVNLDI WVIL                         Q
Sbjct: 61  HVAAQNCWVKKGGAFTGEVSAEMLVNLDIPWVILGHSERRALLNESNEFVGDKVAYALAQ 120

Query: 121 GLKVIAYVGETLEQREAGTTVEVVAAQTKAIADRIMN 137
           GLKVIA VGETLEQREAG+T++VVAAQTKAIADR+ N
Sbjct: 121 GLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSN 157

[Close]

BLAST of Spo03526.1 vs. NCBI nr
Match: gi|674957342|emb|CDX76095.1| (BnaA04g03590D [Brassica napus])

HSP 1 Score: 211.8 bits (538), Expect = 9.500e-52
Identity = 109/157 (69.43%), Postives = 123/157 (78.34%), Query Frame = 1


		  
Query: 1   MSRKFLVGGNWKCNGTTEEVKKLVTTLNEAEVPSEEDLEVVVSPPFVFLSLVKILLRPDF 60
           M+RKF VGGNWKCNGT EEVKK+V TLNEA+VPS++ +EVVVSPP+VFL +VK +LRPDF
Sbjct: 1   MARKFFVGGNWKCNGTAEEVKKIVNTLNEAQVPSQDVVEVVVSPPYVFLPMVKSILRPDF 60

Query: 61  HVAAQNCWVRKGGAFTGEVSAEMLVNLDINWVIL---------------------VCCRQ 120
           HVAAQNCWV+KGGAFTGEVSAEMLVNLDI WVIL                         Q
Sbjct: 61  HVAAQNCWVKKGGAFTGEVSAEMLVNLDIPWVILGHSERRALLNETNEFVGDKVAYALAQ 120

Query: 121 GLKVIAYVGETLEQREAGTTVEVVAAQTKAIADRIMN 137
           GLKVIA VGETLEQREAG+T++VVAAQTKAIADR+ N
Sbjct: 121 GLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSN 157

[Close]

BLAST of Spo03526.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BUJ7_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g173820 PE=3 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 4.900e-55
Identity = 117/157 (74.52%), Postives = 126/157 (80.25%), Query Frame = 1


		  
Query: 1   MSRKFLVGGNWKCNGTTEEVKKLVTTLNEAEVPSEEDLEVVVSPPFVFLSLVKILLRPDF 60
           MSR+F VGGNWKCNGTTEEV+KL+TTLNEAEVPSEED+EVVVSPPFVFL+LVK LLR DF
Sbjct: 1   MSRRFFVGGNWKCNGTTEEVRKLLTTLNEAEVPSEEDVEVVVSPPFVFLTLVKNLLRTDF 60

Query: 61  HVAAQNCWVRKGGAFTGEVSAEMLVNLDINWVIL---------------------VCCRQ 120
           HVAAQNCWVRKGGAFTGE+SA+MLVNL INWVIL                         Q
Sbjct: 61  HVAAQNCWVRKGGAFTGEISADMLVNLGINWVILGHSERRALLNETNDFVADKVSYALSQ 120

Query: 121 GLKVIAYVGETLEQREAGTTVEVVAAQTKAIADRIMN 137
           GLKVIA VGETLEQREAG+T+EVVAAQTKAIAD IMN
Sbjct: 121 GLKVIACVGETLEQREAGSTMEVVAAQTKAIADLIMN 157

[Close]

BLAST of Spo03526.1 vs. UniProtKB/TrEMBL
Match: R9UBI1_SILLA (TPI (Fragment) OS=Silene latifolia GN=TPI PE=4 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 9.200e-54
Identity = 116/157 (73.89%), Postives = 124/157 (78.98%), Query Frame = 1


		  
Query: 1   MSRKFLVGGNWKCNGTTEEVKKLVTTLNEAEVPSEEDLEVVVSPPFVFLSLVKILLRPDF 60
           MSRKF VGGNWKCNGT EEVKKLVTTLNE+EVPSE+ +EVVVSPPFV+L+LVK LLRPDF
Sbjct: 1   MSRKFFVGGNWKCNGTYEEVKKLVTTLNESEVPSEDVVEVVVSPPFVYLTLVKNLLRPDF 60

Query: 61  HVAAQNCWVRKGGAFTGEVSAEMLVNLDINWVIL---------------------VCCRQ 120
           HVAAQNCWVRKGGAFTGEVSAEMLVNL INWVIL                         Q
Sbjct: 61  HVAAQNCWVRKGGAFTGEVSAEMLVNLGINWVILGHSERRALLNETNEFVADKVAYALSQ 120

Query: 121 GLKVIAYVGETLEQREAGTTVEVVAAQTKAIADRIMN 137
           GLKVIA VGETLEQREAGTT++VVAAQTKAIAD + N
Sbjct: 121 GLKVIACVGETLEQREAGTTMKVVAAQTKAIADLVSN 157

[Close]

BLAST of Spo03526.1 vs. UniProtKB/TrEMBL
Match: A0A078EQK7_BRANA (BnaC04g25470D protein OS=Brassica napus GN=BnaC04g25470D PE=3 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 3.000e-52
Identity = 110/156 (70.51%), Postives = 123/156 (78.85%), Query Frame = 1


		  
Query: 1   MSRKFLVGGNWKCNGTTEEVKKLVTTLNEAEVPSEEDLEVVVSPPFVFLSLVKILLRPDF 60
           M+RKF VGGNWKCNGT EEVKK+V TLNEA+VPS++ +EVVVSPP+VFL LVK +LRPDF
Sbjct: 1   MARKFFVGGNWKCNGTAEEVKKIVNTLNEAQVPSQDVVEVVVSPPYVFLPLVKSILRPDF 60

Query: 61  HVAAQNCWVRKGGAFTGEVSAEMLVNLDINWVIL--------------------VCCRQG 120
           HVAAQNCWV+KGGAFTGEVSAEMLVNLDI WVIL                        QG
Sbjct: 61  HVAAQNCWVKKGGAFTGEVSAEMLVNLDIPWVILGHSERRALLNESNEAGDKVAYALAQG 120

Query: 121 LKVIAYVGETLEQREAGTTVEVVAAQTKAIADRIMN 137
           LKVIA VGETLEQREAG+T++VVAAQTKAIADR+ N
Sbjct: 121 LKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSN 156

[Close]

BLAST of Spo03526.1 vs. UniProtKB/TrEMBL
Match: A0A078CGX2_BRANA (BnaA04g03590D protein OS=Brassica napus GN=BnaA04g03590D PE=3 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 6.600e-52
Identity = 109/157 (69.43%), Postives = 123/157 (78.34%), Query Frame = 1


		  
Query: 1   MSRKFLVGGNWKCNGTTEEVKKLVTTLNEAEVPSEEDLEVVVSPPFVFLSLVKILLRPDF 60
           M+RKF VGGNWKCNGT EEVKK+V TLNEA+VPS++ +EVVVSPP+VFL +VK +LRPDF
Sbjct: 1   MARKFFVGGNWKCNGTAEEVKKIVNTLNEAQVPSQDVVEVVVSPPYVFLPMVKSILRPDF 60

Query: 61  HVAAQNCWVRKGGAFTGEVSAEMLVNLDINWVIL---------------------VCCRQ 120
           HVAAQNCWV+KGGAFTGEVSAEMLVNLDI WVIL                         Q
Sbjct: 61  HVAAQNCWVKKGGAFTGEVSAEMLVNLDIPWVILGHSERRALLNETNEFVGDKVAYALAQ 120

Query: 121 GLKVIAYVGETLEQREAGTTVEVVAAQTKAIADRIMN 137
           GLKVIA VGETLEQREAG+T++VVAAQTKAIADR+ N
Sbjct: 121 GLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSN 157

[Close]

BLAST of Spo03526.1 vs. UniProtKB/TrEMBL
Match: A0A061GVZ0_THECC (Triosephosphate isomerase OS=Theobroma cacao GN=TCM_041830 PE=3 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 8.600e-52
Identity = 110/157 (70.06%), Postives = 124/157 (78.98%), Query Frame = 1


		  
Query: 1   MSRKFLVGGNWKCNGTTEEVKKLVTTLNEAEVPSEEDLEVVVSPPFVFLSLVKILLRPDF 60
           M+RKF VGGNWKCNGTTEEVKK+VTTLNEAEVPSE+ +EVVVSPPFVFL+LVK LLR DF
Sbjct: 1   MARKFFVGGNWKCNGTTEEVKKIVTTLNEAEVPSEDVVEVVVSPPFVFLNLVKSLLRSDF 60

Query: 61  HVAAQNCWVRKGGAFTGEVSAEMLVNLDINWVIL---------------------VCCRQ 120
           HVAAQNCWVRKGGAFTGEVSAEMLVNL+I WVI+                         Q
Sbjct: 61  HVAAQNCWVRKGGAFTGEVSAEMLVNLNIPWVIIGHSERRALLNESNEFVGDKVAYALSQ 120

Query: 121 GLKVIAYVGETLEQREAGTTVEVVAAQTKAIADRIMN 137
           GL+VIA +GETLEQRE+G+T+ VVAAQTKAIAD++ N
Sbjct: 121 GLEVIACIGETLEQRESGSTMAVVAAQTKAIADKVTN 157

[Close]

BLAST of Spo03526.1 vs. ExPASy Swiss-Prot
Match: TPIS_ARATH (Triosephosphate isomerase, cytosolic OS=Arabidopsis thaliana GN=CTIMC PE=1 SV=2)

HSP 1 Score: 203.8 bits (517), Expect = 1.600e-51
Identity = 107/157 (68.15%), Postives = 120/157 (76.43%), Query Frame = 1


		  
Query: 1   MSRKFLVGGNWKCNGTTEEVKKLVTTLNEAEVPSEEDLEVVVSPPFVFLSLVKILLRPDF 60
           M+RKF VGGNWKCNGT EEVKK+V TLNEA+VPS++ +EVVVSPP+VFL LVK  LR DF
Sbjct: 1   MARKFFVGGNWKCNGTAEEVKKIVNTLNEAQVPSQDVVEVVVSPPYVFLPLVKSTLRSDF 60

Query: 61  HVAAQNCWVRKGGAFTGEVSAEMLVNLDINWVIL---------------------VCCRQ 120
            VAAQNCWV+KGGAFTGEVSAEMLVNLDI WVIL                         Q
Sbjct: 61  FVAAQNCWVKKGGAFTGEVSAEMLVNLDIPWVILGHSERRAILNESSEFVGDKVAYALAQ 120

Query: 121 GLKVIAYVGETLEQREAGTTVEVVAAQTKAIADRIMN 137
           GLKVIA VGETLE+REAG+T++VVAAQTKAIADR+ N
Sbjct: 121 GLKVIACVGETLEEREAGSTMDVVAAQTKAIADRVTN 157

[Close]

BLAST of Spo03526.1 vs. ExPASy Swiss-Prot
Match: TPIS_COPJA (Triosephosphate isomerase, cytosolic OS=Coptis japonica PE=2 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 2.800e-51
Identity = 107/155 (69.03%), Postives = 118/155 (76.13%), Query Frame = 1


		  
Query: 1   MSRKFLVGGNWKCNGTTEEVKKLVTTLNEAEVPSEEDLEVVVSPPFVFLSLVKILLRPDF 60
           M RKF VGGNWKCNGT+EEVKK+VT LNEAEVPSE+ +EVVVSPP+VFL  VK LLR DF
Sbjct: 1   MGRKFFVGGNWKCNGTSEEVKKIVTLLNEAEVPSEDVVEVVVSPPYVFLPFVKNLLRADF 60

Query: 61  HVAAQNCWVRKGGAFTGEVSAEMLVNLDINWVIL---------------------VCCRQ 120
           HVAAQNCWV+KGGAFTGEVSAEMLVNL I WVIL                         Q
Sbjct: 61  HVAAQNCWVKKGGAFTGEVSAEMLVNLGIPWVILGHSERRALLNESNEFVGDKTAYALSQ 120

Query: 121 GLKVIAYVGETLEQREAGTTVEVVAAQTKAIADRI 135
           GLKVIA VGETLEQREAG+T+ VVAAQTKAIA+++
Sbjct: 121 GLKVIACVGETLEQREAGSTISVVAAQTKAIAEKV 155

[Close]

BLAST of Spo03526.1 vs. ExPASy Swiss-Prot
Match: TPIS_PETHY (Triosephosphate isomerase, cytosolic OS=Petunia hybrida GN=TPIP1 PE=2 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 2.300e-50
Identity = 104/155 (67.10%), Postives = 118/155 (76.13%), Query Frame = 1


		  
Query: 1   MSRKFLVGGNWKCNGTTEEVKKLVTTLNEAEVPSEEDLEVVVSPPFVFLSLVKILLRPDF 60
           M RKF VGGNWKCNGT EEVKK++ TLN A+VPS++ +EVVVSPP+VFL LVK  LRPDF
Sbjct: 1   MGRKFFVGGNWKCNGTAEEVKKILATLNAADVPSQDVVEVVVSPPYVFLPLVKNELRPDF 60

Query: 61  HVAAQNCWVRKGGAFTGEVSAEMLVNLDINWVIL---------------------VCCRQ 120
           HVAAQNCWV+KGGAFTGEVSAEMLVNL I WVIL                         Q
Sbjct: 61  HVAAQNCWVKKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLGESNEFVGDKVAYALSQ 120

Query: 121 GLKVIAYVGETLEQREAGTTVEVVAAQTKAIADRI 135
           GLKVIA VGETLE+RE+G+T++VVAAQTKAIADR+
Sbjct: 121 GLKVIACVGETLEERESGSTMDVVAAQTKAIADRV 155

[Close]

BLAST of Spo03526.1 vs. ExPASy Swiss-Prot
Match: TPIS_MAIZE (Triosephosphate isomerase, cytosolic OS=Zea mays PE=3 SV=3)

HSP 1 Score: 191.0 bits (484), Expect = 1.100e-47
Identity = 99/155 (63.87%), Postives = 116/155 (74.84%), Query Frame = 1


		  
Query: 1   MSRKFLVGGNWKCNGTTEEVKKLVTTLNEAEVPSEEDLEVVVSPPFVFLSLVKILLRPDF 60
           M RKF VGGNWKCNGTT++V+K+V TLNE +VP  + +EVVVSPP+VFL +VK  LR +F
Sbjct: 1   MGRKFFVGGNWKCNGTTDQVEKIVKTLNEGQVPPSDVVEVVVSPPYVFLPVVKSQLRQEF 60

Query: 61  HVAAQNCWVRKGGAFTGEVSAEMLVNLDINWVIL---------------------VCCRQ 120
           HVAAQNCWV+KGGAFTGEVSAEMLVNL + WVIL                         Q
Sbjct: 61  HVAAQNCWVKKGGAFTGEVSAEMLVNLGVPWVILGHSERRALLGESNEFVGDKVAYALSQ 120

Query: 121 GLKVIAYVGETLEQREAGTTVEVVAAQTKAIADRI 135
           GLKVIA VGETLEQREAG+T++VVAAQTKAIA++I
Sbjct: 121 GLKVIACVGETLEQREAGSTMDVVAAQTKAIAEKI 155

[Close]

BLAST of Spo03526.1 vs. ExPASy Swiss-Prot
Match: TPIS_ORYSJ (Triosephosphate isomerase, cytosolic OS=Oryza sativa subsp. japonica GN=TPI PE=1 SV=3)

HSP 1 Score: 183.3 bits (464), Expect = 2.300e-45
Identity = 96/155 (61.94%), Postives = 113/155 (72.90%), Query Frame = 1


		  
Query: 1   MSRKFLVGGNWKCNGTTEEVKKLVTTLNEAEVPSEEDLEVVVSPPFVFLSLVKILLRPDF 60
           M RKF VGGNWKCNGTT++V K+V  LNE ++ S + +EVVVSPP+VFL +VK  LRP+ 
Sbjct: 1   MGRKFFVGGNWKCNGTTDQVDKIVKILNEGQIASTDVVEVVVSPPYVFLPVVKSQLRPEI 60

Query: 61  HVAAQNCWVRKGGAFTGEVSAEMLVNLDINWVIL---------------------VCCRQ 120
            VAAQNCWV+KGGAFTGEVSAEMLVNL I WVIL                         Q
Sbjct: 61  QVAAQNCWVKKGGAFTGEVSAEMLVNLSIPWVILGHSERRSLLGESNEFVGDKVAYALSQ 120

Query: 121 GLKVIAYVGETLEQREAGTTVEVVAAQTKAIADRI 135
           GLKVIA VGETLEQRE+G+T++VVAAQTKAI++RI
Sbjct: 121 GLKVIACVGETLEQRESGSTMDVVAAQTKAISERI 155

[Close]

BLAST of Spo03526.1 vs. TAIR (Arabidopsis)
Match: AT3G55440.1 (triosephosphate isomerase)

HSP 1 Score: 203.8 bits (517), Expect = 9.100e-53
Identity = 107/157 (68.15%), Postives = 120/157 (76.43%), Query Frame = 1


		  
Query: 1   MSRKFLVGGNWKCNGTTEEVKKLVTTLNEAEVPSEEDLEVVVSPPFVFLSLVKILLRPDF 60
           M+RKF VGGNWKCNGT EEVKK+V TLNEA+VPS++ +EVVVSPP+VFL LVK  LR DF
Sbjct: 1   MARKFFVGGNWKCNGTAEEVKKIVNTLNEAQVPSQDVVEVVVSPPYVFLPLVKSTLRSDF 60

Query: 61  HVAAQNCWVRKGGAFTGEVSAEMLVNLDINWVIL---------------------VCCRQ 120
            VAAQNCWV+KGGAFTGEVSAEMLVNLDI WVIL                         Q
Sbjct: 61  FVAAQNCWVKKGGAFTGEVSAEMLVNLDIPWVILGHSERRAILNESSEFVGDKVAYALAQ 120

Query: 121 GLKVIAYVGETLEQREAGTTVEVVAAQTKAIADRIMN 137
           GLKVIA VGETLE+REAG+T++VVAAQTKAIADR+ N
Sbjct: 121 GLKVIACVGETLEEREAGSTMDVVAAQTKAIADRVTN 157

[Close]

BLAST of Spo03526.1 vs. TAIR (Arabidopsis)
Match: AT2G21170.1 (triosephosphate isomerase)

HSP 1 Score: 129.4 bits (324), Expect = 2.200e-30
Identity = 72/154 (46.75%), Postives = 90/154 (58.44%), Query Frame = 1


		  
Query: 2   SRKFLVGGNWKCNGTTEEVKKLVTTLNEAEVPSEEDLEVVVSPPFVFLSLVKILLRPDFH 61
           S KF VGGNWKCNGT + + KL++ LN A +  E D++VVVSPPFV++  VK  L     
Sbjct: 63  SGKFFVGGNWKCNGTKDSIAKLISDLNSATL--EADVDVVVSPPFVYIDQVKSSLTDRID 122

Query: 62  VAAQNCWVRKGGAFTGEVSAEMLVNLDINWVIL---------------------VCCRQG 121
           ++ QN WV KGGAFTGE+S E L +L   WVIL                         +G
Sbjct: 123 ISGQNSWVGKGGAFTGEISVEQLKDLGCKWVILGHSERRHVIGEKDEFIGKKAAYALSEG 182

Query: 122 LKVIAYVGETLEQREAGTTVEVVAAQTKAIADRI 135
           L VIA +GE LE+REAG T +V  AQ KA AD +
Sbjct: 183 LGVIACIGEKLEEREAGKTFDVCFAQLKAFADAV 214

The following BLAST results are available for this feature:

BLAST of Spo03526.1 vs. NCBI nr
BLAST of Spo03526.1 vs. UniProtKB/TrEMBL
BLAST of Spo03526.1 vs. ExPASy Swiss-Prot
BLAST of Spo03526.1 vs. TAIR (Arabidopsis)

BLAST of Spo03526.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|731348961\|ref\|XP_010685754.1\|	7.0e-55	74.5	PREDICTED: triosephosphate iso...	[more]
gi\|510937277\|gb\|AGN52927.1\|	1.3e-53	73.8	TPI, partial [Silene latifolia...	[more]
gi\|674930448\|emb\|CDY02939.1\|	4.3e-52	70.5	BnaC04g25470D [Brassica napus]	[more]
gi\|923678122\|ref\|XP_013652726.1\|	5.6e-52	70.0	PREDICTED: triosephosphate iso...	[more]
gi\|674957342\|emb\|CDX76095.1\|	9.5e-52	69.4	BnaA04g03590D [Brassica napus]	[more]

BLAST of Spo03526.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0J8BUJ7_BETVU	4.9e-55	74.5	Uncharacterized protein OS=Bet...	[more]
R9UBI1_SILLA	9.2e-54	73.8	TPI (Fragment) OS=Silene latif...	[more]
A0A078EQK7_BRANA	3.0e-52	70.5	BnaC04g25470D protein OS=Brass...	[more]
A0A078CGX2_BRANA	6.6e-52	69.4	BnaA04g03590D protein OS=Brass...	[more]
A0A061GVZ0_THECC	8.6e-52	70.0	Triosephosphate isomerase OS=T...	[more]

BLAST of Spo03526.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
TPIS_ARATH	1.6e-51	68.1	Triosephosphate isomerase, cyt...	[more]
TPIS_COPJA	2.8e-51	69.0	Triosephosphate isomerase, cyt...	[more]
TPIS_PETHY	2.3e-50	67.1	Triosephosphate isomerase, cyt...	[more]
TPIS_MAIZE	1.1e-47	63.8	Triosephosphate isomerase, cyt...	[more]
TPIS_ORYSJ	2.3e-45	61.9	Triosephosphate isomerase, cyt...	[more]

BLAST of Spo03526.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2


Match Name	E-value	Identity	Description
AT3G55440.1	9.1e-53	68.1	triosephosphate isomerase	[more]
AT2G21170.1	2.2e-30	46.7	triosephosphate isomerase	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000652	Triosephosphate isomerase	PANTHER	PTHR21139	TRIOSEPHOSPHATE ISOMERASE	coord: 1..136 score: 2.0
IPR000652	Triosephosphate isomerase	PFAM	PF00121	TIM	coord: 6..94 score: 7.6E-20coord: 97..137 score: 4.
IPR000652	Triosephosphate isomerase	PROFILE	PS51440	TIM_2	coord: 4..178 score: 25
IPR000652	Triosephosphate isomerase	unknown	SSF51351	Triosephosphate isomerase (TIM)	coord: 2..144 score: 1.31
IPR013785	Aldolase-type TIM barrel	GENE3D	3.20.20.70		coord: 1..94 score: 4.1E-27coord: 96..136 score: 6.
None	No IPR available	PANTHER	PTHR21139:SF6	TRIOSEPHOSPHATE ISOMERASE, CYTOSOLIC	coord: 1..136 score: 2.0

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015976	carbon utilization
biological_process	GO:0006000	fructose metabolic process
biological_process	GO:0006094	gluconeogenesis
biological_process	GO:0046486	glycerolipid metabolic process
biological_process	GO:0006096	glycolytic process
biological_process	GO:0006020	inositol metabolic process
biological_process	GO:0006013	mannose metabolic process
biological_process	GO:0008152	metabolic process
molecular_function	GO:0004807	triose-phosphate isomerase activity
molecular_function	GO:0003824	catalytic activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo17730	0.67	Barchart \| Table