Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGACCAATTCCAAATTCATGTCCCACTCCCAGTACTCCCTTCTTCTTCTCTCGGCTTTCCATGCGTCTCGCCGGTGGTTCTCACCAGTGGCCGTCGCCGCTGGGTCTCGCCCGTCGCCAGTGGTACTCCAGCAAAAGTTTATTTCCTCGCCTCCTCGCCTCTCACCGGTGGTTCCCTGTTCGAAAACCCCCAGCAAGAGTCTATTTCAGCCCGCGCGCACCGTATACCTGGCCCTTCTTCTTCGATCTTCCCTCAGCTCTACCGGAAACACCGCTGACCTTGCCCCCTCTTCTTCTTCGATCTTCCTTGCTGGCCCCTTCTTCTTCCCTCTGCGTTTTTCTCTCTCCTCTGCTTCTCAAATATTAGGGTTTGTGAATTAGAATTTGGGGATTTGGGAGTTAGGGCTTTTCGTATCGGTGGCAGAGCACCACTCATAACCACTCCACAACAGCGGCGTGAGTGACTGACGACAACCTTGTTGTTGTTGTTGTTGTTGTTTTTTATTGATGTTGTTTAAATTTATACTGACAGTGGCAGATATAATGAGTTGGTTTTCAGGCAGGCTATTCATCTCCTACTCAGTCTGCAATTACTGCAGAACTTGGTCTCTCTACTACTCAGGTTTGTTGATCACTTTCTGCTTGTTCTATGTTATATTTGGAACTTCAATTTTGGGAATTTTCATCTATTTTGTGAGTATTAATCATTACAGGTAAGAGTTGAATTGTGGGTTTTTACACGATTGACAAGAATCTACAGCCGTAGTTGTGGATTAGGGTAGGTAAGGTCATGCTAGTTCTAAGTCATGTTTGATCAATTAGCTCGATAGTTATATCATCTTTTCTGGGGTAAACATTGGGTCAGGTCATGCTAGTTGGAGTGGTCTTTGATCAATCAGCTCATTAGTTATAATCAAATTTTCTGGGGCAAACTTGGGTCAGGTTAGTTTTTGACACCTCAATTAAAATGATGGTAGTTGTGGAATTCAAAGAGTTGAGTTGAAAAACAGGATTCTGACAATTGTTTCTGAGTTGAGTGAGAACAAAAACTGTAAATTTATTTGATTTGAGACATTATGATCTTGTTCTTTTCACGTTCCACAAACCCATTTCTTGGAAACAAGTTCCAAGCAGTTCAAAGAAGGGATACCAAGTTCATTTTGCAACTAAATAAGTGTTAATAAGTTATATTTAGTTTGAATCAACAACTCACCATAATAATACTGAAACCGTGCACAGGAGTAAGACACCACACAACCAAAGGTGAATGATATTTTGCATCTTAGTGTACACCATAATCACATTTCAACCATGTAAATGAGTAAAAGGTGACTCCAAAAGCCAGTGAATCAATAATAATTTGGATCATAACTGGTCACCATTATTGGTCTGCAACTATTCACATCAGTAAGAAACCACACCAAAGGCCAACTATGTGTAGACGTATAGTGGACACCTAGTTGTTCTTGAAACATTCTATTTACATGTTTTCATTCACTCTCCATGTCCAATTTCCGCTGTTCATTTTCTTGCAGTTTTCACTTTTCAGTTCTATACTTACTTTTGGTGCAATGATTGGAGCTATCACTAGTGGACCTATTGCAGATTTTATTGGGAGGAAATGGGTATGGAATCAAACTAAAGTTTGACATTATGAACTAATAACTTTCACCTAGCTTAGTCTTTTGAATTCTTCGGAATGGTTAAATGTTCTGCAGGCGATGAGAGTGTATTCCGCTTTCTGTGTGGGCGGGTGGTTTTCCATATATTTTGCCAAGGTTCAGCTTCAAAGATTATTAACCTCTTTAATCCTTACTGAACTTCTATTTCAGAGAAATAAATCATATGTGAATTTCTCGTTAATTATTCAGGGTTCTTTAGCATTGGATATAGGAAGACTAGCAGGAGGATACGGAATGGGTGCCTTCTCCTATGTGGTATGTATGCTTTGGAGTTATATGCCATCTTTATAGAGAAAACTTTGTTCAAGGACAAAATTTTTTCAGCTTTACATTGAAATGCTAGCCAACATGATATGGTAAAATCAACAGGTACCTGTTTACATTGCGGAAATAACACCCGTAAATCTCCGAGGAGCACTTACAACATTAAACCAGGTATTTTAGTACATTAGGAAGTGAAACAGTTGTACTTCATGTTTTACTAAAATTCTTGCAGTTACCATATCAAATTTTAGGAATGATATTAATACACTATTTTCTCCTATTATAGGTCATGATCTGTACTGGCGTCTCAGTGGCGTTTATTATAGGGATAGTTTTATCATGGAGAACTTTAGCATTAACTGGTAAAGAATTAGAGAAAAGGAGTTTATGGATGAGTGTGATTACTTAAAATAAAAATCTTAGACATTGCAGCAAGAGACTTACTAACCATATAATGCAGGACTTATTCCTAATGTGATGTTCTGCTTTTGGGTTTATTCTTCATTCCAGAATCTCCATGATGGCTGGTAAGCATACATAATCATTTCAAAATTAGGTATACAATTCAATTGAAACAATCATATCAAATCGAAGTAAATACAGGCGAAAATAG ATGACCAATTCCAAATTCATGTCCCACTCCCAGTACTCCCTTCTTCTTCTCTCGGCTTTCCATGCGTCTCGCCGGTGGTTCTCACCAGTGGCCGTCGCCGCTGGGTCTCGCCCGTCGCCAGTGGTACTCCAGCAAAAGTTTATTTCCTCGCCTCCTCGCCTCTCACCGGTGGTTCCCTGTTCGAAAACCCCCAGCAAGAGTCTATTTCAGCCCGCGCGCACCGTATACCTGGCCCTTCTTCTTCGATCTTCCCTCAGCTCTACCGGAAACACCGCTGACCTTGCCCCCTCTTCTTCTTCGATCTTCCTTGCTGGCCCCTTCTTCTTCCCTCTGCGTTTTTCTCTCTCCTCTGCTTCTCAAATATTAGGTGGCAGATATAATGAGTTGGTTTTCAGGCAGGCTATTCATCTCCTACTCAGTCTGCAATTACTGCAGAACTTGGTCTCTCTACTACTCAGTTCTATACTTACTTTTGGTGCAATGATTGGAGCTATCACTAGTGGACCTATTGCAGATTTTATTGGGAGGAAATGGGCGATGAGAGTGTATTCCGCTTTCTGTGTGGGCGGGTGGTTTTCCATATATTTTGCCAAGGGTTCTTTAGCATTGGATATAGGAAGACTAGCAGGAGGATACGGAATGGGTGCCTTCTCCTATGTGGTACCTGTTTACATTGCGGAAATAACACCCGTAAATCTCCGAGGAGCACTTACAACATTAAACCAGGTCATGATCTGTACTGGCGTCTCAGTGGCGTTTATTATAGGGATAGTTTTATCATGGAGAACTTTAGCATTAACTGGACTTATTCCTAATGTGATGTTCTGCTTTTGGGTTTATTCTTCATTCCAGAATCTCCATGATGGCTGGCGAAAATAG ATGACCAATTCCAAATTCATGTCCCACTCCCAGTACTCCCTTCTTCTTCTCTCGGCTTTCCATGCGTCTCGCCGGTGGTTCTCACCAGTGGCCGTCGCCGCTGGGTCTCGCCCGTCGCCAGTGGTACTCCAGCAAAAGTTTATTTCCTCGCCTCCTCGCCTCTCACCGGTGGTTCCCTGTTCGAAAACCCCCAGCAAGAGTCTATTTCAGCCCGCGCGCACCGTATACCTGGCCCTTCTTCTTCGATCTTCCCTCAGCTCTACCGGAAACACCGCTGACCTTGCCCCCTCTTCTTCTTCGATCTTCCTTGCTGGCCCCTTCTTCTTCCCTCTGCGTTTTTCTCTCTCCTCTGCTTCTCAAATATTAGGTGGCAGATATAATGAGTTGGTTTTCAGGCAGGCTATTCATCTCCTACTCAGTCTGCAATTACTGCAGAACTTGGTCTCTCTACTACTCAGTTCTATACTTACTTTTGGTGCAATGATTGGAGCTATCACTAGTGGACCTATTGCAGATTTTATTGGGAGGAAATGGGCGATGAGAGTGTATTCCGCTTTCTGTGTGGGCGGGTGGTTTTCCATATATTTTGCCAAGGGTTCTTTAGCATTGGATATAGGAAGACTAGCAGGAGGATACGGAATGGGTGCCTTCTCCTATGTGGTACCTGTTTACATTGCGGAAATAACACCCGTAAATCTCCGAGGAGCACTTACAACATTAAACCAGGTCATGATCTGTACTGGCGTCTCAGTGGCGTTTATTATAGGGATAGTTTTATCATGGAGAACTTTAGCATTAACTGGACTTATTCCTAATGTGATGTTCTGCTTTTGGGTTTATTCTTCATTCCAGAATCTCCATGATGGCTGGCGAAAATAG MTNSKFMSHSQYSLLLLSAFHASRRWFSPVAVAAGSRPSPVVLQQKFISSPPRLSPVVPCSKTPSKSLFQPARTVYLALLLRSSLSSTGNTADLAPSSSSIFLAGPFFFPLRFSLSSASQILGGRYNELVFRQAIHLLLSLQLLQNLVSLLLSSILTFGAMIGAITSGPIADFIGRKWAMRVYSAFCVGGWFSIYFAKGSLALDIGRLAGGYGMGAFSYVVPVYIAEITPVNLRGALTTLNQVMICTGVSVAFIIGIVLSWRTLALTGLIPNVMFCFWVYSSFQNLHDGWRK Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo03395.1 vs. NCBI nr
Match: gi|902193683|gb|KNA12358.1| (hypothetical protein SOVF_126530 isoform B [Spinacia oleracea]) HSP 1 Score: 408.7 bits (1049), Expect = 8.700e-111 Identity = 235/295 (79.66%), Postives = 239/295 (81.02%), Query Frame = 1
BLAST of Spo03395.1 vs. NCBI nr
Match: gi|902145307|gb|KNA04962.1| (hypothetical protein SOVF_194790 [Spinacia oleracea]) HSP 1 Score: 231.5 bits (589), Expect = 1.900e-57 Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 1
BLAST of Spo03395.1 vs. NCBI nr
Match: gi|902209295|gb|KNA16175.1| (hypothetical protein SOVF_091490 isoform A [Spinacia oleracea]) HSP 1 Score: 230.7 bits (587), Expect = 3.200e-57 Identity = 118/121 (97.52%), Postives = 118/121 (97.52%), Query Frame = 1
BLAST of Spo03395.1 vs. NCBI nr
Match: gi|902209296|gb|KNA16176.1| (hypothetical protein SOVF_091490 isoform B [Spinacia oleracea]) HSP 1 Score: 223.0 bits (567), Expect = 6.700e-55 Identity = 118/131 (90.08%), Postives = 119/131 (90.84%), Query Frame = 1
BLAST of Spo03395.1 vs. NCBI nr
Match: gi|902193682|gb|KNA12357.1| (hypothetical protein SOVF_126530 isoform A [Spinacia oleracea]) HSP 1 Score: 213.0 bits (541), Expect = 7.000e-52 Identity = 107/108 (99.07%), Postives = 108/108 (100.00%), Query Frame = 1
BLAST of Spo03395.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R080_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_126530 PE=4 SV=1) HSP 1 Score: 408.7 bits (1049), Expect = 6.000e-111 Identity = 235/295 (79.66%), Postives = 239/295 (81.02%), Query Frame = 1
BLAST of Spo03395.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QCF9_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_194790 PE=4 SV=1) HSP 1 Score: 231.5 bits (589), Expect = 1.300e-57 Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 1
BLAST of Spo03395.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R9L8_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_091490 PE=3 SV=1) HSP 1 Score: 230.7 bits (587), Expect = 2.300e-57 Identity = 118/121 (97.52%), Postives = 118/121 (97.52%), Query Frame = 1
BLAST of Spo03395.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R9J3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_091490 PE=3 SV=1) HSP 1 Score: 223.0 bits (567), Expect = 4.700e-55 Identity = 118/131 (90.08%), Postives = 119/131 (90.84%), Query Frame = 1
BLAST of Spo03395.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QYL2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_126530 PE=4 SV=1) HSP 1 Score: 213.0 bits (541), Expect = 4.900e-52 Identity = 107/108 (99.07%), Postives = 108/108 (100.00%), Query Frame = 1
BLAST of Spo03395.1 vs. ExPASy Swiss-Prot
Match: ERDL7_ARATH (Sugar transporter ERD6-like 7 OS=Arabidopsis thaliana GN=At2g48020 PE=2 SV=2) HSP 1 Score: 180.3 bits (456), Expect = 3.100e-44 Identity = 90/121 (74.38%), Postives = 104/121 (85.95%), Query Frame = 1
BLAST of Spo03395.1 vs. ExPASy Swiss-Prot
Match: EDL16_ARATH (Sugar transporter ERD6-like 16 OS=Arabidopsis thaliana GN=At5g18840 PE=2 SV=2) HSP 1 Score: 160.6 bits (405), Expect = 2.600e-38 Identity = 78/127 (61.42%), Postives = 99/127 (77.95%), Query Frame = 1
BLAST of Spo03395.1 vs. ExPASy Swiss-Prot
Match: ERDL5_ARATH (Sugar transporter ERD6-like 5 OS=Arabidopsis thaliana GN=At1g54730 PE=2 SV=2) HSP 1 Score: 140.6 bits (353), Expect = 2.800e-32 Identity = 71/124 (57.26%), Postives = 89/124 (71.77%), Query Frame = 1
BLAST of Spo03395.1 vs. ExPASy Swiss-Prot
Match: ERDL8_ARATH (Sugar transporter ERD6-like 8 OS=Arabidopsis thaliana GN=At3g05150 PE=2 SV=1) HSP 1 Score: 138.7 bits (348), Expect = 1.000e-31 Identity = 73/127 (57.48%), Postives = 90/127 (70.87%), Query Frame = 1
BLAST of Spo03395.1 vs. ExPASy Swiss-Prot
Match: ERDL3_ARATH (Sugar transporter ERD6-like 3 OS=Arabidopsis thaliana GN=SUGTL2 PE=2 SV=1) HSP 1 Score: 122.5 bits (306), Expect = 7.800e-27 Identity = 82/207 (39.61%), Postives = 114/207 (55.07%), Query Frame = 1
BLAST of Spo03395.1 vs. TAIR (Arabidopsis)
Match: AT2G48020.2 (Major facilitator superfamily protein) HSP 1 Score: 180.3 bits (456), Expect = 1.800e-45 Identity = 90/121 (74.38%), Postives = 104/121 (85.95%), Query Frame = 1
BLAST of Spo03395.1 vs. TAIR (Arabidopsis)
Match: AT5G18840.1 (Major facilitator superfamily protein) HSP 1 Score: 160.6 bits (405), Expect = 1.400e-39 Identity = 78/127 (61.42%), Postives = 99/127 (77.95%), Query Frame = 1
BLAST of Spo03395.1 vs. TAIR (Arabidopsis)
Match: AT1G54730.2 (Major facilitator superfamily protein) HSP 1 Score: 140.6 bits (353), Expect = 1.600e-33 Identity = 71/124 (57.26%), Postives = 89/124 (71.77%), Query Frame = 1
BLAST of Spo03395.1 vs. TAIR (Arabidopsis)
Match: AT3G05150.1 (Major facilitator superfamily protein) HSP 1 Score: 138.7 bits (348), Expect = 5.900e-33 Identity = 73/127 (57.48%), Postives = 90/127 (70.87%), Query Frame = 1
BLAST of Spo03395.1 vs. TAIR (Arabidopsis)
Match: AT1G08920.2 (ERD (early response to dehydration) six-like 1) HSP 1 Score: 122.5 bits (306), Expect = 4.400e-28 Identity = 82/207 (39.61%), Postives = 114/207 (55.07%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo03395.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo03395.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo03395.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo03395.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
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